PDB_ID PUBMED_CID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS CITATION TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 2VS2 18479128 Neutron diffraction structure of endothiapepsin in complex with a gem- diol inhibitor. 2008-04-17 2008-05-27 Coates, L.,Tuan, H.-F.,Tomanicek, S.,Kovalevsky, A.,Mustyakimov, M.,Erskine, P.,Cooper, J. The Catalytic Mechanism of an Aspartic Proteinase Explored with Neutron and X-Ray Diffraction J.Am.Chem.Soc. 2008 130 7235 0 4S2F 26392527 Joint X-ray/neutron structure of Trichoderma reesei xylanase II at pH 4.4 2015-01-20 2015-09-23 Wan, Q.,Parks, J.M.,Hanson, B.L.,Fisher, S.Z.,Ostermann, A.,Schrader, T.E.,Graham, D.E.,Coates, L.,Langan, P.,Kovalevsky, A. Direct determination of protonation states and visualization of hydrogen bonding in a glycoside hydrolase with neutron crystallography. Proc.Natl.Acad.Sci.USA 2015 112 12384 12389 4S2F 26392527 Joint X-ray/neutron structure of Trichoderma reesei xylanase II at pH 4.4 2015-01-20 2015-09-23 Wan, Q.,Parks, J.M.,Hanson, B.L.,Fisher, S.Z.,Ostermann, A.,Schrader, T.E.,Graham, D.E.,Coates, L.,Langan, P.,Kovalevsky, A. Direct determination of protonation states and visualization of hydrogen bonding in a glycoside hydrolase with neutron crystallography. Proc.Natl.Acad.Sci.USA 2015 112 12384 12389 5A93 26630115 293K Joint X-ray Neutron with Cefotaxime: EXPLORING THE MECHANISM OF BETA-LACTAM RING PROTONATION IN THE CLASS A BETA-LACTAMASE ACYLATION MECHANISM USING NEUTRON AND X-RAY CRYSTALLOGRAPHY 2015-07-17 2015-12-16 Vandavasi, V.G.,Weiss, K.L.,Cooper, J.B.,Erskine, P.T.,Tomanicek, S.J.,Ostermann, A.,Schrader, T.E.,Ginell, S.L.,Coates, L. Exploring the Mechanism of Beta-Lactam Ring Protonation in the Class a Beta-Lactamase Acylation Mechanism Using Neutron and X-Ray Crystallography. J.Med.Chem. 2016 59 474 0 5A93 26630115 293K Joint X-ray Neutron with Cefotaxime: EXPLORING THE MECHANISM OF BETA-LACTAM RING PROTONATION IN THE CLASS A BETA-LACTAMASE ACYLATION MECHANISM USING NEUTRON AND X-RAY CRYSTALLOGRAPHY 2015-07-17 2015-12-16 Vandavasi, V.G.,Weiss, K.L.,Cooper, J.B.,Erskine, P.T.,Tomanicek, S.J.,Ostermann, A.,Schrader, T.E.,Ginell, S.L.,Coates, L. Exploring the Mechanism of Beta-Lactam Ring Protonation in the Class a Beta-Lactamase Acylation Mechanism Using Neutron and X-Ray Crystallography. J.Med.Chem. 2016 59 474 0 5EBJ 27000644 Joint X-ray/neutron structure of reversibly photoswitching chromogenic protein, Dathail 2015-10-19 2016-04-06 Langan, P.S.,Close, D.W.,Coates, L.,Rocha, R.C.,Ghosh, K.,Kiss, C.,Waldo, G.,Freyer, J.,Kovalevsky, A.,Bradbury, A.R. Evolution and characterization of a new reversibly photoswitching chromogenic protein, Dathail. J.Mol.Biol. 2016 428 1776 1789 5EBJ 27000644 Joint X-ray/neutron structure of reversibly photoswitching chromogenic protein, Dathail 2015-10-19 2016-04-06 Langan, P.S.,Close, D.W.,Coates, L.,Rocha, R.C.,Ghosh, K.,Kiss, C.,Waldo, G.,Freyer, J.,Kovalevsky, A.,Bradbury, A.R. Evolution and characterization of a new reversibly photoswitching chromogenic protein, Dathail. J.Mol.Biol. 2016 428 1776 1789 5KSC 27795378 E166A/R274N/R276N Toho-1 Beta-lactamase aztreonam acyl-enzyme intermediate 2016-07-08 2016-11-09 Vandavasi, V.G.,Langan, P.S.,Weiss, K.L.,Parks, J.M.,Cooper, J.B.,Ginell, S.L.,Coates, L. Active-Site Protonation States in an Acyl-Enzyme Intermediate of a Class A beta-Lactamase with a Monobactam Substrate. Antimicrob. Agents Chemother. 2017 61 0 0 5VG1 28481095 Neutron crystallographic structure of a Jonesia denitrificans lytic polysaccharide monooxygenase 2017-04-10 2017-05-24 Bacik, J.P.,Mekasha, S.,Forsberg, Z.,Kovalevsky, A.Y.,Vaaje-Kolstad, G.,Eijsink, V.G.H.,Nix, J.C.,Coates, L.,Cuneo, M.J.,Unkefer, C.J.,Chen, J.C. Neutron and Atomic Resolution X-ray Structures of a Lytic Polysaccharide Monooxygenase Reveal Copper-Mediated Dioxygen Binding and Evidence for N-Terminal Deprotonation. Biochemistry 2017 56 2529 2532 5TY5 Neutron structure from microgravity-grown crystals of Inorganic Pyrophosphatase from Thermococcus theoreducens 2016-11-18 2017-11-22 Inoguchi, N.,Coates, L.,Meilleur, F.,Morris, M.L.,Singhal, A.,Barcena, J.,Garcia-Ruiz, J.M.,Pusey, M.L.,Ng, J.D. Structure-function analysis of the neutron crystallographic structure of inorganic pyrophosphatase determined from microgravity-grown crystals Acta Crystallogr.,Sect.A 2017 73 132 132 5NKU 29142780 Joint neutron/X-ray structure of dimeric chlorite dismutase from Cyanothece sp. PCC7425 2017-04-03 2018-02-28 Schaffner, I.,Mlynek, G.,Flego, N.,Puhringer, D.,Libiseller-Egger, J.,Coates, L.,Hofbauer, S.,Bellei, M.,Furtmuller, P.G.,Battistuzzi, G.,Smulevich, G.,Djinovic-Carugo, K.,Obinger, C. Molecular Mechanism of Enzymatic Chlorite Detoxification: Insights from Structural and Kinetic Studies. ACS Catal 2017 7 7962 7976 5NKU 29142780 Joint neutron/X-ray structure of dimeric chlorite dismutase from Cyanothece sp. PCC7425 2017-04-03 2018-02-28 Schaffner, I.,Mlynek, G.,Flego, N.,Puhringer, D.,Libiseller-Egger, J.,Coates, L.,Hofbauer, S.,Bellei, M.,Furtmuller, P.G.,Battistuzzi, G.,Smulevich, G.,Djinovic-Carugo, K.,Obinger, C. Molecular Mechanism of Enzymatic Chlorite Detoxification: Insights from Structural and Kinetic Studies. ACS Catal 2017 7 7962 7976 6BBZ 29632894 Room temperature neutron/X-ray structure of sisomicin bound AAC-VIa 2017-10-20 2018-02-28 Kumar, P.,Serpersu, E.H.,Cuneo, M.J. A low-barrier hydrogen bond mediates antibiotic resistance in a noncanonical catalytic triad. Sci Adv 2018 4 0 0 6BBZ 29632894 Room temperature neutron/X-ray structure of sisomicin bound AAC-VIa 2017-10-20 2018-02-28 Kumar, P.,Serpersu, E.H.,Cuneo, M.J. A low-barrier hydrogen bond mediates antibiotic resistance in a noncanonical catalytic triad. Sci Adv 2018 4 0 0 6BC9 29429876 Joint X-ray/neutron structure of human carbonic anhydrase II in complex with dorzolamide 2017-10-20 2018-02-28 Kovalevsky, A.,Aggarwal, M.,Velazquez, H.,Cuneo, M.J.,Blakeley, M.P.,Weiss, K.L.,Smith, J.C.,Fisher, S.Z.,McKenna, R. ""To Be or Not to Be"" Protonated: Atomic Details of Human Carbonic Anhydrase-Clinical Drug Complexes by Neutron Crystallography and Simulation. Structure 2018 26 383 0 6BC9 29429876 Joint X-ray/neutron structure of human carbonic anhydrase II in complex with dorzolamide 2017-10-20 2018-02-28 Kovalevsky, A.,Aggarwal, M.,Velazquez, H.,Cuneo, M.J.,Blakeley, M.P.,Weiss, K.L.,Smith, J.C.,Fisher, S.Z.,McKenna, R. ""To Be or Not to Be"" Protonated: Atomic Details of Human Carbonic Anhydrase-Clinical Drug Complexes by Neutron Crystallography and Simulation. Structure 2018 26 383 0 6BCC 29429876 Joint X-ray/neutron structure of human carbonic anhydrase II in complex with ethoxzolamide 2017-10-20 2018-02-28 Kovalevsky, A.,Aggarwal, M.,Velazquez, H.,Cuneo, M.J.,Blakeley, M.P.,Weiss, K.L.,Smith, J.C.,Fisher, S.Z.,McKenna, R. ""To Be or Not to Be"" Protonated: Atomic Details of Human Carbonic Anhydrase-Clinical Drug Complexes by Neutron Crystallography and Simulation. Structure 2018 26 383 0 6BCC 29429876 Joint X-ray/neutron structure of human carbonic anhydrase II in complex with ethoxzolamide 2017-10-20 2018-02-28 Kovalevsky, A.,Aggarwal, M.,Velazquez, H.,Cuneo, M.J.,Blakeley, M.P.,Weiss, K.L.,Smith, J.C.,Fisher, S.Z.,McKenna, R. ""To Be or Not to Be"" Protonated: Atomic Details of Human Carbonic Anhydrase-Clinical Drug Complexes by Neutron Crystallography and Simulation. Structure 2018 26 383 0 6C78 Substrate Binding Induces Conformational Changes In A Class A Beta Lactamase That Primes It For Catalysis 2018-01-22 2018-03-21 Langan, P.S.,Vandavasi, V.G.,Cooper, S.J.,Weiss, K.L.,Ginell, S.L.,Parks, J.M.,Coates, L. Substrate Binding Induces Conformational Changes in a Class A Beta-lactamase That Prime It for Catalysis Acs Catalysis 2018 8 2428 2437 6EYM 29672051 Neutron crystal structure of perdeuterated galectin-3C in complex with lactose 2017-11-13 2018-09-12 Manzoni, F.,Wallerstein, J.,Schrader, T.E.,Ostermann, A.,Coates, L.,Akke, M.,Blakeley, M.P.,Oksanen, E.,Logan, D.T. Elucidation of Hydrogen Bonding Patterns in Ligand-Free, Lactose- and Glycerol-Bound Galectin-3C by Neutron Crystallography to Guide Drug Design. J. Med. Chem. 2018 61 4412 4420 6EYM 29672051 Neutron crystal structure of perdeuterated galectin-3C in complex with lactose 2017-11-13 2018-09-12 Manzoni, F.,Wallerstein, J.,Schrader, T.E.,Ostermann, A.,Coates, L.,Akke, M.,Blakeley, M.P.,Oksanen, E.,Logan, D.T. Elucidation of Hydrogen Bonding Patterns in Ligand-Free, Lactose- and Glycerol-Bound Galectin-3C by Neutron Crystallography to Guide Drug Design. J. Med. 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To be published 0 0 0 0 6U0F Neutron crystal structure of T4L L99AE 2019-08-14 2020-08-19 Li, L.,Myles, D.A.,Cuneo, M.J. Solvent entry into cavities of T4 lysozyme. To be published 0 0 0 0 6U0E Neutron crystal structure of T4L M6AE 2019-08-14 2020-09-02 Li, L.,Myles, D.A.,Cuneo, M.J. Solvent entry into cavities of T4 lysozyme To be published 0 0 0 0 6U0E Neutron crystal structure of T4L M6AE 2019-08-14 2020-09-02 Li, L.,Myles, D.A.,Cuneo, M.J. Solvent entry into cavities of T4 lysozyme To be published 0 0 0 0 7JUN 33060199 Joint neutron/X-ray structure of SARS-CoV-2 3CL Mpro at room temperature 2020-08-20 2020-09-02 Kneller, D.W.,Phillips, G.,Weiss, K.L.,Pant, S.,Zhang, Q.,O'Neill, H.M.,Coates, L.,Kovalevsky, A. Unusual zwitterionic catalytic site of SARS-CoV-2 main protease revealed by neutron crystallography. 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Sci Adv 2022 8 0 0 7TX3 35622909 Neutron crystal structure of SARS-CoV-2 NSP3 macrodomain at 293 K (P43 crystal form) 2022-02-07 2022-02-23 Correy, G.J.,Kneller, D.W.,Phillips, G.,Pant, S.,Russi, S.,Cohen, A.E.,Meigs, G.,Holton, J.M.,Gahbauer, S.,Thompson, M.C.,Ashworth, A.,Coates, L.,Kovalevsky, A.,Meilleur, F.,Fraser, J.S. The mechanisms of catalysis and ligand binding for the SARS-CoV-2 NSP3 macrodomain from neutron and x-ray diffraction at room temperature. Sci Adv 2022 8 0 0 7TX4 35622909 Neutron crystal structure of SARS-CoV-2 NSP3 macrodomain at 293 K (P21 crystal form) 2022-02-07 2022-02-23 Correy, G.J.,Kneller, D.W.,Phillips, G.,Pant, S.,Russi, S.,Cohen, A.E.,Meigs, G.,Holton, J.M.,Gahbauer, S.,Thompson, M.C.,Ashworth, A.,Coates, L.,Kovalevsky, A.,Meilleur, F.,Fraser, J.S. The mechanisms of catalysis and ligand binding for the SARS-CoV-2 NSP3 macrodomain from neutron and x-ray diffraction at room temperature. 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Universality of critical active site glutamate as an acid-base catalyst in serine hydroxymethyltransferase function. Chem Sci 2024 15 12827 12844 9BPE 39148791 Joint X-ray/neutron structure of Thermus thermophilus serine hydroxymethyltransferase (TthSHMT) in internal aldimine state and folinic acid bound 2024-05-07 2024-08-28 Drago, V.N.,Phillips, R.S.,Kovalevsky, A. Universality of critical active site glutamate as an acid-base catalyst in serine hydroxymethyltransferase function. Chem Sci 2024 15 12827 12844 9BVY 39987263 Neutron Structure of Peroxide-Soaked Tyr34Phe MnSOD 2024-05-20 2025-03-12 Azadmanesh, J.,Slobodnik, K.,Struble, L.R.,Lovelace, J.J.,Cone, E.A.,Dasgupta, M.,Lutz, W.E.,Kumar, S.,Natarajan, A.,Coates, L.,Weiss, K.L.,Myles, D.A.A.,Kroll, T.,Borgstahl, G.E.O. The role of Tyr34 in proton coupled electron transfer and product inhibition of manganese superoxide dismutase. Nat Commun 2025 16 1887 1887 9BW2 39987263 Neutron Structure of Reduced Tyr34Phe MnSOD 2024-05-20 2025-03-12 Azadmanesh, J.,Slobodnik, K.,Struble, L.R.,Lovelace, J.J.,Cone, E.A.,Dasgupta, M.,Lutz, W.E.,Kumar, S.,Natarajan, A.,Coates, L.,Weiss, K.L.,Myles, D.A.A.,Kroll, T.,Borgstahl, G.E.O. The role of Tyr34 in proton coupled electron transfer and product inhibition of manganese superoxide dismutase. Nat Commun 2025 16 1887 1887 9BWM 39987263 Neutron Structure of Oxidized Tyr34Phe MnSOD 2024-05-21 2025-03-12 Azadmanesh, J.,Slobodnik, K.,Struble, L.R.,Lovelace, J.J.,Cone, E.A.,Dasgupta, M.,Lutz, W.E.,Kumar, S.,Natarajan, A.,Coates, L.,Weiss, K.L.,Myles, D.A.A.,Kroll, T.,Borgstahl, G.E.O. The role of Tyr34 in proton coupled electron transfer and product inhibition of manganese superoxide dismutase. Nat Commun 2025 16 1887 1887 9G98 40102416 Joint neutron and x-ray structure of alginate lyase PsAlg7C soaked with pentamannuronic acid 2024-07-24 2025-07-30 Rivas-Fernandez, J.P.,Vuillemin, M.,Pilgaard, B.,Klau, L.J.,Fredslund, F.,Lund-Hanssen, C.,Welner, D.H.,Meyer, A.S.,Morth, J.P.,Meilleur, F.,Aachmann, F.L.,Rovira, C.,Wilkens, C. Unraveling the molecular mechanism of polysaccharide lyases for efficient alginate degradation. Nat Commun 2025 16 2670 2670 9G98 40102416 Joint neutron and x-ray structure of alginate lyase PsAlg7C soaked with pentamannuronic acid 2024-07-24 2025-07-30 Rivas-Fernandez, J.P.,Vuillemin, M.,Pilgaard, B.,Klau, L.J.,Fredslund, F.,Lund-Hanssen, C.,Welner, D.H.,Meyer, A.S.,Morth, J.P.,Meilleur, F.,Aachmann, F.L.,Rovira, C.,Wilkens, C. Unraveling the molecular mechanism of polysaccharide lyases for efficient alginate degradation. Nat Commun 2025 16 2670 2670 9G99 40102416 Joint neutron and x-ray structure of apo alginate lyase PsAlg7C 2024-07-24 2025-07-30 Rivas-Fernandez, J.P.,Vuillemin, M.,Pilgaard, B.,Klau, L.J.,Fredslund, F.,Lund-Hanssen, C.,Welner, D.H.,Meyer, A.S.,Morth, J.P.,Meilleur, F.,Aachmann, F.L.,Rovira, C.,Wilkens, C. Unraveling the molecular mechanism of polysaccharide lyases for efficient alginate degradation. Nat Commun 2025 16 2670 2670 9G99 40102416 Joint neutron and x-ray structure of apo alginate lyase PsAlg7C 2024-07-24 2025-07-30 Rivas-Fernandez, J.P.,Vuillemin, M.,Pilgaard, B.,Klau, L.J.,Fredslund, F.,Lund-Hanssen, C.,Welner, D.H.,Meyer, A.S.,Morth, J.P.,Meilleur, F.,Aachmann, F.L.,Rovira, C.,Wilkens, C. Unraveling the molecular mechanism of polysaccharide lyases for efficient alginate degradation. Nat Commun 2025 16 2670 2670 9G99 40102416 Joint neutron and x-ray structure of apo alginate lyase PsAlg7C 2024-07-24 2025-07-30 Rivas-Fernandez, J.P.,Vuillemin, M.,Pilgaard, B.,Klau, L.J.,Fredslund, F.,Lund-Hanssen, C.,Welner, D.H.,Meyer, A.S.,Morth, J.P.,Meilleur, F.,Aachmann, F.L.,Rovira, C.,Wilkens, C. Unraveling the molecular mechanism of polysaccharide lyases for efficient alginate degradation. Nat Commun 2025 16 2670 2670 9G99 40102416 Joint neutron and x-ray structure of apo alginate lyase PsAlg7C 2024-07-24 2025-07-30 Rivas-Fernandez, J.P.,Vuillemin, M.,Pilgaard, B.,Klau, L.J.,Fredslund, F.,Lund-Hanssen, C.,Welner, D.H.,Meyer, A.S.,Morth, J.P.,Meilleur, F.,Aachmann, F.L.,Rovira, C.,Wilkens, C. Unraveling the molecular mechanism of polysaccharide lyases for efficient alginate degradation. Nat Commun 2025 16 2670 2670 9YZV Joint Xray/Neutron structure of human DJ-1 at room temperature 2025-10-30 2025-11-19 Lin, J.,Gerlits, O.,Kneller, D.W.,Weiss, K.L.,Coates, L.,Hix, M.A.,Effah, S.Y.,Kovalevsky, A.,Walker, A.R.,Wilson, M.A. Environmental contributions to proton sharing in protein low barrier hydrogen bonds To Be Published 0 0 0 0 9YZV Joint Xray/Neutron structure of human DJ-1 at room temperature 2025-10-30 2025-11-19 Lin, J.,Gerlits, O.,Kneller, D.W.,Weiss, K.L.,Coates, L.,Hix, M.A.,Effah, S.Y.,Kovalevsky, A.,Walker, A.R.,Wilson, M.A. Environmental contributions to proton sharing in protein low barrier hydrogen bonds To Be Published 0 0 0 0 9YZW Joint Xray/Neutron structure of Escherichia coli YajL at room temperature 2025-10-30 2025-11-19 Lin, J.,Gerlits, O.,Kneller, D.W.,Weiss, K.L.,Coates, L.,Hix, M.A.,Effah, S.Y.,Kovalevsky, A.,Walker, A.R.,Wilson, M.A. Environmental contributions to proton sharing in protein low barrier hydrogen bonds To Be Published 0 0 0 0 9YZW Joint Xray/Neutron structure of Escherichia coli YajL at room temperature 2025-10-30 2025-11-19 Lin, J.,Gerlits, O.,Kneller, D.W.,Weiss, K.L.,Coates, L.,Hix, M.A.,Effah, S.Y.,Kovalevsky, A.,Walker, A.R.,Wilson, M.A. Environmental contributions to proton sharing in protein low barrier hydrogen bonds To Be Published 0 0 0 0