PDB_ID PUBMED_CID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS CITATION TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 2GJP 16946462 Structure of Bacillus halmapalus alpha-amylase, crystallized with the substrate analogue acarbose and maltose 2006-03-31 2006-09-05 Lyhne-Iversen, L.,Hobley, T.J.,Kaasgaard, S.G.,Harris, P. Structure of Bacillus halmapalus alpha-amylase crystallized with and without the substrate analogue acarbose and maltose. Acta Crystallogr.,Sect.F 2006 62 849 854 2GJR 16946462 Structure of bacillus halmapalus alpha-amylase without any substrate analogues 2006-03-31 2006-09-05 Lyhne-Iversen, L.,Hobley, T.J.,Kaasgaard, S.G.,Harris, P. Structure of Bacillus halmapalus alpha-amylase crystallized with and without the substrate analogue acarbose and maltose. Acta Crystallogr.,Sect.F 2006 62 849 854 2DY2 17148448 Nitrite reductase pH 6.0 2006-09-05 2006-12-05 Jacobson, F.,Pistorius, A.,Farkas, D.,De Grip, W.,Hansson, O.,Sjolin, L.,Neutze, R. pH Dependence of Copper Geometry, Reduction Potential, and Nitrite Affinity in Nitrite Reductase J.Biol.Chem. 2007 282 6347 6355 2H1W 17198378 Crystal structure of the His183Ala mutant variant of Bacillus subtilis ferrochelatase 2006-05-17 2007-01-16 Hansson, M.D.,Karlberg, T.,Rahardja, M.A.,Al-Karadaghi, S.,Hansson, M. Amino Acid Residues His183 and Glu264 in Bacillus subtilis Ferrochelatase Direct and Facilitate the Insertion of Metal Ion into Protoporphyrin IX Biochemistry 2007 46 87 94 2HK6 17198378 Crystal Structure of B. subtilis ferrochelatase with Iron bound at the active site 2006-07-03 2007-01-16 Hansson, M.D.,Karlberg, T.,Rahardja, M.A.,Al-Karadaghi, S.,Hansson, M. Amino Acid Residues His183 and Glu264 in Bacillus subtilis Ferrochelatase Direct and Facilitate the Insertion of Metal Ion into Protoporphyrin IX Biochemistry 2007 46 87 94 2GCI 17320106 The 1,1-proton transfer reaction mechanism by alpha-methylacyl-CoA racemase is catalyzed by an asparte/histidine pair and involves a smooth, methionine-rich surface for binding the fatty acyl moiety 2006-03-14 2007-02-20 Bhaumik, P.,Schmitz, W.,Hassinen, A.,Hiltunen, J.K.,Conzelmann, E.,Wierenga, R.K. The Catalysis of the 1,1-Proton Transfer by alpha-Methyl-acyl-CoA Racemase Is Coupled to a Movement of the Fatty Acyl Moiety Over a Hydrophobic, Methionine-rich Surface J.Mol.Biol. 2007 367 1145 1161 2GD0 17320106 The 1,1-proton transfer reaction mechanism by alpha-methylacyl-CoA racemase is catalyzed by an aspartate/histidine pair and involves a smooth, methionine-rich surface for binding the fatty acyl moiety 2006-03-15 2007-02-20 Bhaumik, P.,Schmitz, W.,Hassinen, A.,Hiltunen, J.K.,Conzelmann, E.,Wierenga, R.K. The Catalysis of the 1,1-Proton Transfer by alpha-Methyl-acyl-CoA Racemase Is Coupled to a Movement of the Fatty Acyl Moiety Over a Hydrophobic, Methionine-rich Surface J.Mol.Biol. 2007 367 1145 1161 2J4L 17297917 Crystal structure of uridylate kinase from Sulfolobus solfataricus in complex with UTP to 2.8 Angstrom resolution 2006-09-01 2007-02-27 Jensen, K.S.,Johansson, E.,Jensen, K.F. Structural and Enzymatic Investigation of the Sulfolobus Solfataricus Uridylate Kinase Shows Competitive Utp Inhibition and the Lack of GTP Stimulation Biochemistry 2007 46 2745 0 2UVL 19923725 Human BIR3 domain of Baculoviral Inhibitor of Apoptosis Repeat- Containing 3 (BIRC3) 2007-03-12 2007-03-27 Herman, M.D.,Moche, M.,Flodin, S.,Welin, M.,Tresaugues, L.,Johansson, I.,Nilsson, M.,Nordlund, P.,Nyman, T. Structures of Bir Domains from Human Naip and Ciap2. Acta Crystallogr.,Sect.F 2009 65 1091 0 2Q3D 17567578 2.2 A Resolution Crystal Structure of O-Acetylserine Sulfhydrylase (OASS) From MYCOBACTERIUM TUBERCULOSIS in Complex with the Reaction Intermediate ALPHA-AMINOACRYLATE 2007-05-30 2007-06-12 Schnell, R.,Oehlmann, W.,Singh, M.,Schneider, G. Structural Insights into Catalysis and Inhibition of O-Acetylserine Sulfhydrylase from Mycobacterium tuberculosis: CRYSTAL STRUCTURES OF THE ENZYME {alpha}-AMINOACRYLATE INTERMEDIATE AND AN ENZYME-INHIBITOR COMPLEX. J.Biol.Chem. 2007 282 23473 23481 2V9X 17996716 E138D variant of Escherichia coli dCTP deaminase in complex with dUTP 2007-08-28 2007-11-20 Thymark, M.,Johansson, E.,Larsen, S.,Willemoes, M. Mutational Analysis of the Nucleotide Binding Site of Escherichia Coli Dctp Deaminase. Arch.Biochem.Biophys. 2008 470 20 0 2OLY 18093308 Structure of human insulin in presence of urea at pH 7.0 2007-01-20 2007-12-04 Norrman, M.,Schluckebier, G. Crystallographic characterization of two novel crystal forms of human insulin induced by chaotropic agents and a shift in pH. Bmc Struct.Biol. 2007 7 83 83 2OLZ 18093308 Structure of human insulin in presence of thiocyanate at pH 7.0 2007-01-20 2007-12-04 Norrman, M.,Schluckebier, G. Crystallographic characterization of two novel crystal forms of human insulin induced by chaotropic agents and a shift in pH. Bmc Struct.Biol. 2007 7 83 83 2OM1 18093308 Structure of human insulin in presence of thiocyanate at pH 6.5 2007-01-20 2007-12-04 Norrman, M.,Schluckebier, G. Crystallographic characterization of two novel crystal forms of human insulin induced by chaotropic agents and a shift in pH. Bmc Struct.Biol. 2007 7 83 83 2NXV 18067873 Structure of the 6th ORF of the Rhodobacter blastica ATPase operon; Majastridin 2006-11-20 2007-12-18 Enroth, C.,Strid, A. Crystal structure of a protein, structurally related to glycosyltransferases, encoded in the Rhodobacter blasticus atp operon. Biochim.Biophys.Acta 2008 1784 379 384 3BLJ 25635049 Crystal structure of human poly(ADP-ribose) polymerase 15, catalytic fragment 2007-12-11 2007-12-25 Karlberg, T.,Klepsch, M.,Thorsell, A.G.,Andersson, C.D.,Linusson, A.,Schuler, H. Structural Basis for Lack of ADP-ribosyltransferase Activity in Poly(ADP-ribose) Polymerase-13/Zinc Finger Antiviral Protein. J.Biol.Chem. 2015 290 7336 7344 2V3W 18224647 Crystal structure of the benzoylformate decarboxylase variant L461A from Pseudomonas putida 2007-06-25 2008-01-22 Gocke, D.,Walter, L.,Gauchenova, K.,Kolter, G.,Knoll, M.,Berthold, C.L.,Schneider, G.,Pleiss, J.,Muller, M.,Pohl, M. Rational Protein Design of Thdp-Dependent Enzymes-Engineering Stereoselectivity. Chembiochem 2008 9 406 0 3C59 18287102 Crystal structure of the ligand-bound glucagon-like peptide-1 receptor extracellular domain 2008-01-31 2008-02-19 Runge, S.,Thogersen, H.,Madsen, K.,Lau, J.,Rudolph, R. Crystal Structure of the Ligand-bound Glucagon-like Peptide-1 Receptor Extracellular Domain J.Biol.Chem. 2008 283 11340 11347 3C59 18287102 Crystal structure of the ligand-bound glucagon-like peptide-1 receptor extracellular domain 2008-01-31 2008-02-19 Runge, S.,Thogersen, H.,Madsen, K.,Lau, J.,Rudolph, R. 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Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding. J.Mol.Biol. 2008 377 1161 0 2Q2N 18423489 Crystal structure of Bacillus subtilis ferrochelatase in complex with deuteroporphyrin IX 2,4-disulfonic acid dihydrochloride 2007-05-29 2008-04-22 Karlberg, T.,Hansson, M.D.,Yengo, R.K.,Johansson, R.,Thorvaldsen, O.H.,Ferreira, G.C.,Hansson, M.,Al-Karadaghi, S. Porphyrin binding and distortion and substrate specificity in the ferrochelatase reaction: the role of active site residues J.Mol.Biol. 2008 378 1074 1083 3BC9 18387632 Alpha-amylase B in complex with acarbose 2007-11-12 2008-04-22 Tan, T.-C.,Mijts, B.N.,Swaminathan, K.,Patel, B.K.C.,Divne, C. Crystal Structure of the Polyextremophilic alpha-Amylase AmyB from Halothermothrix orenii: Details of a Productive Enzyme-Substrate Complex and an N Domain with a Role in Binding Raw Starch J.Mol.Biol. 2008 378 850 868 3D48 18467331 Crystal structure of a prolactin receptor antagonist bound to the extracellular domain of the prolactin receptor 2008-05-14 2008-06-03 Svensson, L.A.,Bondensgaard, K.,Norskov-Lauritsen, L.,Christensen, L.,Becker, P.,Andersen, M.D.,Maltesen, M.J.,Rand, K.D.,Breinholt, J. Crystal structure of a prolactin receptor antagonist bound to the extracellular domain of the prolactin receptor J.Biol.Chem. 2008 283 19085 19094 2Q2O 18423489 Crystal structure of H183C Bacillus subtilis ferrochelatase in complex with deuteroporphyrin IX 2,4-disulfonic acid dihydrochloride 2007-05-29 2008-06-17 Karlberg, T.,Hansson, M.D.,Yengo, R.K.,Johansson, R.,Thorvaldsen, H.O.,Ferreira, G.C.,Hansson, M.,Al-Karadaghi, S. Porphyrin binding and distortion and substrate specificity in the ferrochelatase reaction: the role of active site residues J.Mol.Biol. 2008 378 1074 1083 3CZD 22538822 Crystal structure of human glutaminase in complex with L-glutamate 2008-04-29 2008-07-01 Thangavelu, K.,Pan, C.Q.,Karlberg, T.,Balaji, G.,Uttamchandani, M.,Suresh, V.,Schuler, H.,Low, B.C.,Sivaraman, J. Structural basis for the allosteric inhibitory mechanism of human kidney-type glutaminase (KGA) and its regulation by Raf-Mek-Erk signaling in cancer cell metabolism. Proc.Natl.Acad.Sci.USA 2012 109 7705 7710 2VT3 18485070 Structure and functional properties of the Bacillus subtilis transcriptional repressor Rex 2008-05-08 2008-09-09 Wang, E.,Bauer, M.C.,Rogstam, A.,Linse, S.,Logan, D.T.,von Wachenfeldt, C. Structure and functional properties of the Bacillus subtilis transcriptional repressor Rex. Mol. 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J.Mol.Biol. 2008 377 935 0 3ELA 18640965 Crystal structure of active site inhibited coagulation factor VIIA mutant in complex with soluble tissue factor 2008-09-21 2008-11-04 Bjelke, J.R.,Olsen, O.H.,Fodje, M.,Svensson, L.A.,Bang, S.,Bolt, G.,Kragelund, B.B.,Persson, E. Mechanism of the Ca2+-induced enhancement of the intrinsic factor VIIa activity J.Biol.Chem. 2008 283 25863 25870 3EAN 19054767 Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with reduced C-terminal tail 2008-08-26 2008-12-02 Cheng, Q.,Sandalova, T.,Lindqvist, Y.,Arner, E.S. Crystal structure and catalysis of the selenoprotein thioredoxin reductase 1. J.Biol.Chem. 2009 284 3998 4008 3EAO 19054767 Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with oxidized C-terminal tail 2008-08-26 2008-12-02 Cheng, Q.,Sandalova, T.,Lindqvist, Y.,Arner, E.S. Crystal structure and catalysis of the selenoprotein thioredoxin reductase 1. J.Biol.Chem. 2009 284 3998 4008 3FOZ 19158097 Structure of E. coli Isopentenyl-tRNA transferase in complex with E. coli tRNA(Phe) 2009-01-02 2009-01-20 Seif, E.,Hallberg, B.M. RNA-Protein Mutually Induced Fit: STRUCTURE OF ESCHERICHIA COLI ISOPENTENYL-tRNA TRANSFERASE IN COMPLEX WITH tRNA(Phe). J.Biol.Chem. 2009 284 6600 6604 3FDY 19291706 Pyranose 2-oxidase thermostable triple mutant, T169G/E542K/V546C 2008-11-26 2009-03-31 Spadiut, O.,Radakovits, K.,Pisanelli, I.,Salaheddin, C.,Yamabhai, M.,Tan, T.-C.,Divne, C.,Haltrich, D. A thermostable triple mutant of pyranose 2-oxidase from Trametes multicolor with improved properties for biotechnological applications Biotechnol J 2009 4 525 534 3G0Z 19307292 Structure of S. pombe Pop2p - Zn2+ and Mn2+ bound form 2009-01-29 2009-03-31 Andersen, K.R.,Jonstrup, A.T.,Van, L.B.,Brodersen, D.E. The activity and selectivity of fission yeast Pop2p are affected by a high affinity for Zn2+ and Mn2+ in the active site Rna 2009 15 850 861 3G10 19307292 Structure of S. pombe Pop2p - Mg2+ and Mn2+ bound form 2009-01-29 2009-03-31 Andersen, K.R.,Jonstrup, A.T.,Van, L.B.,Brodersen, D.E. The activity and selectivity of fission yeast Pop2p are affected by a high affinity for Zn2+ and Mn2+ in the active site Rna 2009 15 850 861 3GRH 19452549 Crystal structure of escherichia coli ybhc 2009-03-25 2009-04-07 Eklof, J.M.,Tan, T.C.,Divne, C.,Brumer, H. The crystal structure of the outer membrane lipoprotein YbhC from Escherichia coli sheds new light on the phylogeny of carbohydrate esterase family 8. Proteins 2009 76 1029 1036 3GJC 19307590 Crystal Structure of the E290S mutant of LeuT with bound OG 2009-03-08 2009-04-28 Quick, M.,Winther, A.M.L.,Shi, L.,Nissen, P.,Weinstein, H.,Javitch, J.A. Binding of an octylglucoside detergent molecule in the second substrate (S2) site of LeuT establishes an inhibitor-bound conformation Proc.Natl.Acad.Sci.USA 2009 106 5563 5568 2W73 19404396 High-resolution structure of the complex between calmodulin and a peptide from calcineurin A 2008-12-19 2009-05-12 Majava, V.,Kursula, P. Domain Swapping and Different Oligomeric States for the Complex between Calmodulin and the Calmodulin-Binding Domain of Calcineurin A Plos One 2009 4 0 0 3HKV Human poly(ADP-ribose) polymerase 10, catalytic fragment in complex with an inhibitor 3-aminobenzamide 2009-05-26 2009-06-16 Karlberg, T.,Moche, M.,Arrowsmith, C.H.,Berglund, H.,Bountra, C.,Collins, R.,Edwards, A.M.,Flodin, S.,Flores, A.,Graslund, S.,Hammarstrom, M.,Johansson, A.,Johansson, I.,Kotenyova, T.,Kotzsch, A.,Nielsen, T.K.,Nordlund, P.,Nyman, T.,Persson, C.,Roos, A.K.,Sagemark, J.,Schutz, P.,Siponen, M.I.,Thorsell, A.G.,Tresaugues, L.,Van Den Berg, S.,Weigelt, J.,Welin, M.,Wisniewska, M.,Schuler, H. Human Poly(Adp-Ribose) Polymerase 10, Catalytic Fragment in Complex with an Inhibitor 3-Aminobenzamide To be Published 0 0 0 0 3FSX 19394346 Structure of tetrahydrodipicolinate N-succinyltransferase (Rv1201c; DapD) from Mycobacterium tuberculosis 2009-01-12 2009-06-23 Schuldt, L.,Weyand, S.,Kefala, G.,Weiss, M.S. The three-dimensional Structure of a mycobacterial DapD provides insights into DapD diversity and reveals unexpected particulars about the enzymatic mechanism. J.Mol.Biol. 2009 389 863 879 2WHP 19536291 Crystal structure of acetylcholinesterase, phosphonylated by sarin and in complex with HI-6 2009-05-06 2009-06-30 Ekstrom, F.,Hornberg, A.,Artursson, E.,Hammarstrom, L.G.,Schneider, G.,Pang, Y.P. Structure of Hi-6Sarin-Acetylcholinesterase Determined by X-Ray Crystallography and Molecular Dynamics Simulation: Reactivator Mechanism and Design. Plos One 2009 4 0 0 2WHQ 19536291 Crystal structure of acetylcholinesterase, phosphonylated by sarin (aged) in complex with HI-6 2009-05-06 2009-06-30 Ekstrom, F.,Hornberg, A.,Artursson, E.,Hammarstrom, L.G.,Schneider, G.,Pang, Y.P. Structure of Hi-6Sarin-Acetylcholinesterase Determined by X-Ray Crystallography and Molecular Dynamics Simulation: Reactivator Mechanism and Design. Plos One 2009 4 0 0 3HFO 19777643 Crystal Structure of an Hfq protein from Synechocystis sp. 2009-05-12 2009-07-14 Boggild, A.,Overgaard, M.,Valentin-Hansen, P.,Brodersen, D.E. Cyanobacteria contain a structural homologue of the Hfq protein with altered RNA-binding properties. Febs J. 2009 276 3904 3915 3HHC 19457860 Interferon-lambda is functionally an interferon but structurally related to the IL-10 family 2009-05-15 2009-07-21 Gad, H.H.,Dellgren, C.,Hamming, O.J.,Vends, S.,Paludan, S.R.,Hartmann, R. Interferon-{lambda} Is Functionally an Interferon but Structurally Related to the Interleukin-10 Family J.Biol.Chem. 2009 284 20869 20875 3HHC 19457860 Interferon-lambda is functionally an interferon but structurally related to the IL-10 family 2009-05-15 2009-07-21 Gad, H.H.,Dellgren, C.,Hamming, O.J.,Vends, S.,Paludan, S.R.,Hartmann, R. Interferon-{lambda} Is Functionally an Interferon but Structurally Related to the Interleukin-10 Family J.Biol.Chem. 2009 284 20869 20875 2WD6 19609934 Crystal structure of the Variable Domain of the Streptococcus gordonii Surface Protein SspB 2009-03-20 2009-07-28 Forsgren, N.,Lamont, R.J.,Persson, K. Crystal Structure of the Variable Domain of the Streptococcus Gordonii Surface Protein Sspb. Protein Sci. 2009 18 1896 0 3I8S Structure of the cytosolic domain of E. coli FeoB, nucleotide-free form 2009-07-10 2009-07-28 Petermann, N.,Schmidt, C.L.,Hansen, G.,Wagner, A.K.,Hilgenfeld, R.,Hogg, T. Structural basis for the intrinsic GTPase and GDI activities of FeoB, a prokaryotic transmembrane GTP/GDP-binding protein To be Published 0 0 0 0 3I8X Structure of the cytosolic domain of E. coli FeoB, GDP-bound form 2009-07-10 2009-07-28 Petermann, N.,Schmidt, C.L.,Hansen, G.,Wagner, A.K.,Hilgenfeld, R.,Hogg, T. Structural basis for the intrinsic GTPase and GDI activities of FeoB, a prokaryotic transmembrane GTP/GDP-binding protein To be Published 0 0 0 0 2WOD 19706507 Crystal Structure of the dinitrogenase reductase-activating glycohydrolase (DRAG) from Rhodospirillum rubrum in complex with ADP- ribsoyllysine 2009-07-23 2009-08-11 Berthold, C.L.,Wang, H.,Nordlund, S.,Hogbom, M. Mechanism of Adp-Ribosylation Removal Revealed by the Structure and Ligand Complexes of the Dimanganese Mono-Adp-Ribosylhydrolase Drag. Proc.Natl.Acad.Sci.USA 2009 106 14247 0 2WLS 19714254 Crystal structure of Mus musculus Acetylcholinesterase in complex with AMTS13 2009-06-25 2009-09-08 Pang, Y.P.,Ekstrom, F.,Polsinelli, G.A.,Gao, Y.,Rana, S.,Hua, D.H.,Andersson, B.,Andersson, P.O.,Peng, L.,Singh, S.K.,Mishra, R.K.,Zhu, K.Y.,Fallon, A.M.,Ragsdale, D.W.,Brimijoin, S. Selective and Irreversible Inhibitors of Mosquito Acetylcholinesterases for Controlling Malaria and Other Mosquito-Borne Diseases. Plos One 2009 4 0 0 3IBY 20036663 Structure of cytosolic domain of L. pneumophila FeoB 2009-07-17 2009-10-13 Petermann, N.,Hansen, G.,Schmidt, C.L.,Hilgenfeld, R. Structure of the GTPase and GDI domains of FeoB, the ferrous iron transporter of Legionella pneumophila. Febs Lett. 2010 584 733 738 2WU4 19732756 CRYSTAL STRUCTURE OF MOUSE ACETYLCHOLINESTERASE IN COMPLEX WITH FENAMIPHOS AND ORTHO-7 2009-09-28 2009-10-20 Hornberg, A.,Artursson, E.,Warme, R.,Pang, Y.-P.,Ekstrom, F. Crystal Structures of Oxime-Bound Fenamiphos-Acetylcholinesterases: Reactivation Involving Flipping of the His447 Ring to Form a Reactive Glu334-His447-Oxime Triad. Biochem.Pharm. 2010 79 507 0 3EII 20230050 Zinc-bound glycoside hydrolase 61 E from Thielavia terrestris 2008-09-16 2009-10-27 Harris, P.V.,Welner, D.,McFarland, K.C.,Re, E.,Navarro Poulsen, J.C.,Brown, K.,Salbo, R.,Ding, H.,Vlasenko, E.,Merino, S.,Xu, F.,Cherry, J.,Larsen, S.,Lo Leggio, L. Stimulation of lignocellulosic biomass hydrolysis by proteins of glycoside hydrolase family 61: structure and function of a large, enigmatic family. Biochemistry 2010 49 3305 3316 3IOL 19861722 Crystal structure of Glucagon-Like Peptide-1 in complex with the extracellular domain of the Glucagon-Like Peptide-1 Receptor 2009-08-14 2009-10-27 Underwood, C.R.,Garibay, P.,Knudsen, L.B.,Hastrup, S.,Peters, G.H.,Rudolph, R.,Reedtz-Runge, S. Crystal structure of glucagon-like peptide-1 in complex with the extracellular domain of the glucagon-like peptide-1 receptor J.Biol.Chem. 2010 285 723 730 2WL0 19961222 HIV-1 Protease Inhibitors Containing a Tertiary Alcohol in the Transition-State Mimic with Improved Cell-Based Antiviral Activity 2009-06-19 2009-12-15 Mahalingam, A.K.,Axelsson, L.,Ekegren, J.K.,Wannberg, J.,Kihlstr, J.,Unge, T.,Wallberg, H.,Samuelsson, B.,Larhed, M.,Hallberg, A. HIV-1 Protease Inhibitors with a Transition-State Mimic Comprising a Tertiary Alcohol: Improved Antiviral Activity in Cells. J.Med.Chem. 2010 53 607 0 2W44 20568733 Structure DeltaA1-A4 insulin 2008-11-21 2009-12-22 Thorsoe, K.S.,Schlein, M.,Steensgaard, D.B.,Brandt, J.,Schluckebier, G.,Naver, H. Kinetic Evidence for the Sequential Association of Insulin Binding Sites 1 and 2 to the Insulin Receptor and the Influence of Receptor Isoform. Biochemistry 2010 49 6234 0 3KVH Crystal structure of human protein syndesmos (NUDT16-like protein) 2009-11-30 2010-01-19 Tresaugues, L.,Siponen, M.I.,Arrowsmith, C.H.,Berglund, H.,Bountra, C.,Collins, R.,Edwards, A.M.,Flodin, S.,Flores, A.,Graslund, S.,Hammarstrom, M.,Johansson, A.,Johansson, I.,Kallas, A.,Karlberg, T.,Kotenyova, T.,Kotzsch, A.,Kraulis, P.,Moche, M.,Nielsen, T.K.,Nyman, T.,Persson, C.,Roos, A.K.,Schuler, H.,Schutz, P.,Thorsell, A.G.,Van Den Berg, S.,Weigelt, J.,Welin, M.,Wisniewska, M.,Nordlund, P. Crystal structure of human protein syndesmos (NUDT16L1) To be Published 0 0 0 0 2WLQ 20078120 Nucleophile-disabled Lam16A mutant holds laminariheptaose (L7) in a cyclical conformation 2009-06-24 2010-01-26 Vasur, J.,Kawai, R.,Jonsson, K.H.,Widmalm, G.,Engstrom, A.,Frank, M.,Andersson, E.,Hansson, H.,Forsberg, Z.,Igarashi, K.,Samejima, M.,Sandgren, M.,Stahlberg, J. Synthesis of Cyclic Beta-Glucan Using Laminarinase 16A Glycosynthase Mutant from the Basidiomycete Phanerochaete Chrysosporium. J.Am.Chem.Soc. 2010 132 1724 0 3KX2 20168331 Crystal structure of Prp43p in complex with ADP 2009-12-02 2010-01-26 He, Y.,Andersen, G.R.,Nielsen, K.H. Structural basis for the function of DEAH helicases Embo Rep. 2010 11 180 186 2X41 20138890 Structure of beta-glucosidase 3B from Thermotoga neapolitana in complex with glucose 2010-01-28 2010-02-09 Pozzo, T.,Linares Pasten, J.,Karlsson, E.N.,Logan, D.T. Structural and Functional Analysis of Beta-Glucosidase 3B from Thermotoga Neapolitana: A Thermostable 3-Domain Representative of Glycoside Hydrolase Family 3 J.Mol.Biol. 2010 397 724 0 2WZA 20138058 Two intramolecular isopeptide bonds are identified in the crystal structure of the Streptococcus gordonii SspB C-terminal domain 2009-11-26 2010-02-16 Forsgren, N.,Lamont, R.J.,Persson, K. Two Intramolecular Isopeptide Bonds are Identified in the Crystal Structure of the Streptococcus Gordonii Sspb C-Terminal Domain. J.Mol.Biol. 2010 397 740 0 3L9J 20179326 Selection of a novel highly specific TNFalpha antagonist: Insight from the crystal structure of the antagonist-TNFalpha complex 2010-01-05 2010-02-23 Byla, P.,Andersen, M.H.,Holtet, T.L.,Jacobsen, H.,Munch, M.,Gad, H.H.,Thogersen, H.C.,Hartmann, R. Selection of a novel and highly specific TNF{alpha} antagonist: insight from the crystal structure of the antagonist-TNF{alpha} complex J.Biol.Chem. 2010 285 12096 12100 3KQ4 20237569 Structure of Intrinsic Factor-Cobalamin bound to its receptor Cubilin 2009-11-17 2010-03-09 Andersen, C.B.,Madsen, M.,Storm, T.,Moestrup, S.K.,Andersen, G.R. Structural basis for receptor recognition of vitamin-B(12)-intrinsic factor complexes. Nature 2010 464 445 448 3H6X Crystal structure of dUTPase from Streptococcus mutans 2009-04-24 2010-05-05 Li, G.L.,Wang, K.T.,Liu, X.,Li, L.F.,Su, X.D. Structure and activity analysis of dUTP nucleotidohydrolase from Streptococcus mutans To be Published 0 0 0 0 3JZ6 20445230 Crystal structure of Mycobacterium smegmatis Branched Chain Aminotransferase in complex with pyridoxal-5'-phosphate at 1.9 angstrom. 2009-09-23 2010-05-05 Castell, A.,Mille, C.,Unge, T. Structural analysis of mycobacterial branched-chain aminotransferase: implications for inhibitor design. Acta Crystallogr.,Sect.D 2010 66 549 557 3L7V 20606270 Crystal structure of a hypothetical protein smu.1377c from Streptococcus mutans UA159 2009-12-29 2010-07-21 Fu, T.-M.,Liu, X.,Li, L.,Su, X.-D. The structure of the hypothetical protein smu.1377c from Streptococcus mutans suggests a role in tRNA modification Acta Crystallogr.,Sect.F 2010 66 771 775 2XOD 20831589 Crystal structure of flavoprotein NrdI from Bacillus anthracis in the oxidised form 2010-08-14 2010-08-25 Johansson, R.,Torrents, E.,Lundin, D.,Sprenger, J.,Sahlin, M.,Sjoberg, B.M.,Logan, D.T. High Resolution Crystal Structures of Nrdi in the Oxidised and Reduced States: An Unusual Flavodoxin FEBS J. 2010 277 4265 0 3L21 The crystal structure of a dimeric mutant of dihydrodipicolinate synthase (DAPA, RV2753C) from Mycobacterium Tuberculosis - DHDPS-A204R 2009-12-14 2010-12-15 Evans, G.L.,Schuldt, L.,Griffin, M.D.,Perugini, M.A.,Jamerson, G.B.,Devenish, S.R.,Weiss, M.S.,Gerrard, J.A. A dimeric mutant of DHDPS from Mycobacterium tuberculosis To be Published 0 0 0 0 3L21 The crystal structure of a dimeric mutant of dihydrodipicolinate synthase (DAPA, RV2753C) from Mycobacterium Tuberculosis - DHDPS-A204R 2009-12-14 2010-12-15 Evans, G.L.,Schuldt, L.,Griffin, M.D.,Perugini, M.A.,Jamerson, G.B.,Devenish, S.R.,Weiss, M.S.,Gerrard, J.A. A dimeric mutant of DHDPS from Mycobacterium tuberculosis To be Published 0 0 0 0 2XQ0 21146536 Structure of yeast LTA4 hydrolase in complex with Bestatin 2010-08-31 2010-12-29 Helgstrand, C.,Hasan, M.,Usyal, H.,Haeggstrom, J.Z.,Thunnissen, M.M.G.M. A Leukotriene A(4) Hydrolase-Related Aminopeptidase from Yeast Undergoes Induced Fit Upon Inhibitor Binding. J.Mol.Biol. 2011 406 120 0 3LA8 The Crystal Structure of smu.1229 from Streptococcus mutans UA159 2010-01-06 2011-01-12 Su, X.-D.,Hou, Q.M.,Liu, X. The Crystal Structure of smu.1229 from Streptococcus mutans UA159 TO BE PUBLISHED 0 0 0 0 3LBY Crystal structure of SMU.1697c, a putative methyltransferase from streptococcus mutans in complex with SAH 2010-01-08 2011-01-12 Wang, K.-T.,Nan, J.,Su, X.-D. Crystal structure of SMU.1697c, a putative methyltransferase from streptococcus mutans in complex with SAH To be published 0 0 0 0 2XWG 21358052 Crystal structure of sortase C-1 from Actinomyces oris (formerly Actinomyces naeslundii) 2010-11-02 2011-02-23 Persson, K. Structure of the Sortase Acsrtc-1 from Actinomyces Oris Acta Crystallogr.,Sect.D 2011 67 212 0 3PL8 21515286 Pyranose 2-oxidase H167A complex with 3-deoxy-3-fluoro-beta-D-glucose 2010-11-14 2011-04-27 Tan, T.C.,Haltrich, D.,Divne, C. 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J.Biol.Chem. 2011 286 28256 0 3PV5 21670246 Structure of Legionella fallonii DegQ (N189G/P190G variant) 2010-12-06 2011-06-15 Wrase, R.,Scott, H.,Hilgenfeld, R.,Hansen, G. The Legionella HtrA homologue DegQ is a self-compartmentizing protease that forms large 12-meric assemblies. Proc.Natl.Acad.Sci.USA 2011 108 10490 10495 3S2V 21619066 Crystal Structure of the Ligand Binding Domain of GluK1 in Complex with an Antagonist (S)-1-(2'-Amino-2'-carboxyethyl)-3-[(2-carboxythien-3-yl)methyl]thieno[3,4-d]pyrimidin-2,4-dione at 2.5 A Resolution 2011-05-17 2011-06-22 Venskutonyte, R.,Butini, S.,Coccone, S.S.,Gemma, S.,Brindisi, M.,Kumar, V.,Guarino, E.,Maramai, S.,Valenti, S.,Amir, A.,Valades, E.A.,Frydenvang, K.,Kastrup, J.S.,Novellino, E.,Campiani, G.,Pickering, D.S. Selective kainate receptor (GluK1) ligands structurally based upon 1H-cyclopentapyrimidin-2,4(1H,3H)-dione: synthesis, molecular modeling, and pharmacological and biostructural characterization. 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Methylphosphonate Adducts of Acetylcholinesterase Investigated by Time Correlated Single Photon Counting and X-Ray Crystallography To be Published 0 0 0 0 2XYE HIV-1 Inhibitors with a Tertiary-Alcohol-containing Transition-State Mimic and various P2 and P1 prime Substituents 2010-11-17 2011-12-07 Ohrngren, P.,Wu, X.,Persson, M.,Ekegren, J.K.,Wallberg, H.,Vrang, L.,Rosenquist, A.,Samuelsson, B.,Unge, T.,Larhed, M. HIV-1 Protease Inhibitors with a Tertiary Alcohol Containing Transition-State Mimic and Various P2 and P1' Substituents Med.Chem.Commun. 2011 2 701 0 2XYF HIV-1 Inhibitors with a Tertiary-Alcohol-containing Transition-State Mimic and various P2 and P1 prime Substituents 2010-11-17 2011-12-07 Ohrngren, P.,Wu, X.,Persson, M.,Ekegren, J.K.,Wallberg, H.,Vrang, L.,Rosenquist, A.,Samuelsson, B.,Unge, T.,Larhed, M. 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Design and Synthesis of P1-P3 Macrocyclic Tertiary Alcohol Comprising HIV-1 Protease Inhibitors J.Med.Chem. 2013 56 8999 0 4N07 24131202 Crystal structure of the GluA2 ligand-binding domain (S1S2J-L483Y-N754S) in complex with glutamate and BPAM-344 at 1.87 A resolution 2013-10-01 2013-11-20 Nrholm, A.B.,Francotte, P.,Olsen, L.,Krintel, C.,Frydenvang, K.,Goffin, E.,Challal, S.,Danober, L.,Botez-Pop, I.,Lestage, P.,Pirotte, B.,Kastrup, J.S. Synthesis, pharmacological and structural characterization, and thermodynamic aspects of GluA2-positive allosteric modulators with a 3,4-dihydro-2H-1,2,4-benzothiadiazine 1,1-dioxide scaffold. J.Med.Chem. 2013 56 8736 8745 4MIF 24282677 Pyranose 2-oxidase from Phanerochaete chrysosporium, wild type from natural source 2013-08-31 2013-12-11 Hassan, N.,Tan, T.C.,Spadiut, O.,Pisanelli, I.,Fusco, L.,Haltrich, D.,Peterbauer, C.K.,Divne, C. 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Metallomics 2014 6 2090 0 4BWE 24311593 Crystal structure of C-terminally truncated glypican-1 after controlled dehydration to 86 percent relative humidity 2013-07-01 2013-12-18 Awad, W.,Svensson Birkedal, G.,Thunnissen, M.M.,Mani, K.,Logan, D.T. Improvements in the order, isotropy and electron density of glypican-1 crystals by controlled dehydration. Acta Crystallogr. D Biol. Crys 2013 69 2524 2533 4BVM 24419389 The peripheral membrane protein P2 from human myelin at atomic resolution 2013-06-26 2014-01-15 Ruskamo, S.,Yadav, R.P.,Sharma, S.,Lehtimaki, M.,Laulumaa, S.,Aggarwal, S.,Simons, M.,Burck, J.,Ulrich, A.S.,Juffer, A.H.,Kursula, I.,Kursula, P. Atomic Resolution View Into the Structure-Function Relationships of the Human Myelin Peripheral Membrane Protein P2 Acta Crystallogr.,Sect.D 2014 70 165 0 4BF1 23859774 Three dimensional structure of human carbonic anhydrase II in complex with 5-(1-naphthalen-1-yl-1,2,3-triazol-4-yl)thiophene-2-sulfonamide 2013-03-13 2014-01-22 Leitans, J.,Sprudza, A.,Tanc, M.,Vozny, I.,Zalubovskis, R.,Tars, K.,Supuran, C.T. 5-Substituted-(1,2,3-Triazol-4-Yl)Thiophene-2-Sulfonamides Strongly Inhibit Human Carbonic Anhydrases I, II, Ix and Xii: Solution and X-Ray Crystallographic Studies. Bioorg.Med.Chem. 2013 21 5130 0 4MOF 24466218 Pyranose 2-oxidase H450G mutant with 2-fluorinated glucose 2013-09-12 2014-02-05 Tan, T.C.,Spadiut, O.,Gandini, R.,Haltrich, D.,Divne, C. Structural Basis for Binding of Fluorinated Glucose and Galactose to Trametes multicolor Pyranose 2-Oxidase Variants with Improved Galactose Conversion. 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Plos One 2014 9 0 0 4BG1 24571165 Three dimensional structure of human gamma-butyrobetaine hydroxylase in complex with 1-(3-Carboxypropyl)-1-methylpyrrolidin-1-ium chloride 2013-03-22 2014-03-12 Tars, K.,Leitans, J.,Kazaks, A.,Zelencova, D.,Liepinsh, E.,Kuka, J.,Makrecka, M.,Lola, D.,Andrianovs, V.,Gustina, D.,Grinberga, S.,Liepinsh, E.,Kalvinsh, I.,Dambrova, M.,Loza, E.,Pugovics, O. Targeting Carnitine Biosynthesis: Discovery of New Inhibitors Against Gamma-Butyrobetaine Hydroxylase. J.Med.Chem. 2014 57 2213 0 4BGK 24571165 Three dimensional structure of human gamma-butyrobetaine hydroxylase in complex with (3-(Trimethylammonio)propyl)phosphinate 2013-03-27 2014-03-12 Tars, K.,Leitans, J.,Kazaks, A.,Zelencova, D.,Liepinsh, E.,Kuka, J.,Makrecka, M.,Lola, D.,Andrianovs, V.,Gustina, D.,Grinberga, S.,Liepinsh, E.,Kalvinsh, I.,Dambrova, M.,Loza, E.,Pugovics, O. Targeting Carnitine Biosynthesis: Discovery of New Inhibitors Against Gamma-Butyrobetaine Hydroxylase. 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J.Med.Chem. 2014 57 2213 0 4BHI 24571165 Three dimensional structure of human gamma-butyrobetaine hydroxylase in complex with 3-(1,1,1,2-Tetramethylhydrazin-1-ium-2-yl)propanoate 2013-04-03 2014-03-12 Tars, K.,Leitans, J.,Kazaks, A.,Zelencova, D.,Liepinsh, E.,Kuka, J.,Makrecka, M.,Lola, D.,Andrianovs, V.,Gustina, D.,Grinberga, S.,Liepinsh, E.,Kalvinsh, I.,Dambrova, M.,Loza, E.,Pugovics, O. Targeting Carnitine Biosynthesis: Discovery of New Inhibitors Against Gamma-Butyrobetaine Hydroxylase. J.Med.Chem. 2014 57 2213 0 4C5W 24571165 Three dimensional structure of human gamma-butyrobetaine hydroxylase in complex with 4-(Ethyldimethylammonio)butanoate 2013-09-16 2014-03-12 Tars, K.,Leitans, J.,Kazaks, A.,Zelencova, D.,Liepinsh, E.,Kuka, J.,Makrecka, M.,Lola, D.,Andrianovs, V.,Gustina, D.,Grinberga, S.,Liepinsh, E.,Kalvinsh, I.,Dambrova, M.,Loza, E.,Pugovics, O. Targeting Carnitine Biosynthesis: Discovery of New Inhibitors Against Gamma-Butyrobetaine Hydroxylase. J.Med.Chem. 2014 57 2213 0 4NLI 25098178 Crystal structure of sheep beta-lactoglobulin (space group P3121) 2013-11-14 2014-03-12 Loch, J.I.,Molenda, M.,Kopec, M.,Swiatek, S.,Lewinski, K. Structure of two crystal forms of sheep beta-lactoglobulin with EF-loop in closed conformation Biopolymers 2014 101 886 894 4BFC Crystal structure of the C-terminal CMP-Kdo binding domain of WaaA from Acinetobacter baumannii 2013-03-18 2014-04-02 Kimbung, Y.R.,Hakansson, M.,Logan, D.,Wang, P.F.,Schulz, M.,Mamat, U.,Woodard, R.W. Crystal Structure of the C-Terminal Cmp-Kdo Binding Domain of Waaa from Acinetobacter Baumannii To be Published 0 0 0 0 4BG0 24702793 Crystal structure of complement factors H and FHL-1 binding protein BBH06 or CRASP-2 from Borrelia burgdorferi 2013-03-22 2014-04-09 Brangulis, K.,Petrovskis, I.,Kazaks, A.,Bogans, J.,Otikovs, M.,Jaudzems, K.,Ranka, R.,Tars, K. Structural Characterization of Cspz, a Complement Regulator Factor H and Fhl-1 Binding Protein from Borrelia Burgdorferi. FEBS J. 2014 281 2613 0 4BG5 Lyme disease associated outer surface protein BBA65 from Borrelia burgdorferi 2013-03-22 2014-04-09 Brangulis, K.,Akopjana, I.,Petrovskis, I.,Kazaks, A.,Tars, K. Structural analysis of the outer surface proteins from Borrelia burgdorferi paralogous gene family 54 that are thought to be the key players in the pathogenesis of Lyme disease J.Struct.Biol. 2020 0 0 0 4BHG Three dimensional structure of human gamma-butyrobetaine hydroxylase in complex with 3-(1-Ethyl-1,1-dimethylhydrazin-1-ium-2-yl)propanoate 2013-04-02 2014-04-16 Tars, K.,Leitans, J.,Kazaks, A. 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Crystal Structures of the Erp Protein Family Members Erpp and Erpc from Borrelia Burgdorferi Reveal the Reason for Different Affinities for Complement Regulator Factor H. Biochim.Biophys.Acta 2015 1854 349 0 4QDL Crystal structure of E.coli Cas1-Cas2 complex 2014-05-14 2014-05-28 Tamulaitiene, G.,Sinkunas, T.,Silanskas, A.,Gasiunas, G.,Grazulis, S.,Siksnys, V. Crystal structure of E.coli Cas1-Cas2 complex To be Published 0 0 0 0 4BOB 25582082 Structure of Complement regulator-acquiring surface protein 3 (CRASP- 3, ErpP or BBN38) from Borrelia burgdorferi 2013-05-18 2014-06-04 Brangulis, K.,Petrovskis, I.,Kazaks, A.,Akopjana, I.,Tars, K. Crystal Structures of the Erp Protein Family Members Erpp and Erpc from Borrelia Burgdorferi Reveal the Reason for Different Affinities for Complement Regulator Factor H. 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Sci Rep 2016 6 26236 26236 5EL2 27535661 Crystal structure of Odorant Binding Protein 1 from Anopheles gambiae (AgamOBP1) with Icaridin (butan-2-yl 2-(2-hydroxyethyl)piperidine-1-carboxylate) 2015-11-04 2016-08-31 Drakou, C.E.,Tsitsanou, K.E.,Potamitis, C.,Fessas, D.,Zervou, M.,Zographos, S.E. The crystal structure of the AgamOBP1Icaridin complex reveals alternative binding modes and stereo-selective repellent recognition. Cell. Mol. Life Sci. 2017 74 319 338 5FS4 27591890 Bacteriophage AP205 coat protein 2015-12-29 2016-09-21 Shishovs, M.,Rumnieks, J.,Diebolder, C.,Jaudzems, K.,Andreas, L.B.,Stanek, J.,Kazaks, A.,Kotelovica, S.,Akopjana, I.,Pintacuda, G.,Koning, R.I.,Tars, K. Structure of Ap205 Coat Protein Reveals Circular Permutation in Ssrna Bacteriophages. J.Mol.Biol. 2016 428 4267 0 5DWC 28039325 Crystal structure of restriction endonuclease AgeI 2015-09-22 2016-09-28 Tamulaitiene, G.,Jovaisaite, V.,Tamulaitis, G.,Songailiene, I.,Manakova, E.,Zaremba, M.,Grazulis, S.,Xu, S.Y.,Siksnys, V. Restriction endonuclease AgeI is a monomer which dimerizes to cleave DNA. Nucleic Acids Res. 2017 45 3547 3558 5ECY Structure of the Shigella flexneri VapC mutant D98N crystal form 2 2015-10-20 2016-10-19 Xu, K.,Dedic, E.,Brodersen, D.E. Structural analysis on the active site architecture of an activated VapC toxin from Shigella flexneri to be published 0 0 0 0 5HHT 27767080 Crystal structure of E. coli transketolase triple variant Ser385Tyr/Asp469Thr/Arg520Gln 2016-01-11 2016-11-02 Affaticati, P.E.,Dai, S.B.,Payongsri, P.,Hailes, H.C.,Tittmann, K.,Dalby, P.A. Structural Analysis of an Evolved Transketolase Reveals Divergent Binding Modes. Sci Rep 2016 6 35716 35716 5K8J 27998932 Structure of Caulobacter crescentus VapBC1 (apo form) 2016-05-30 2016-12-28 Bendtsen, K.L.,Xu, K.,Luckmann, M.,Winther, K.S.,Shah, S.A.,Pedersen, C.N.S.,Brodersen, D.E. Toxin inhibition in C. crescentus VapBC1 is mediated by a flexible pseudo-palindromic protein motif and modulated by DNA binding. Nucleic Acids Res. 2017 45 2875 2886 5L6L 27998932 Structure of Caulobacter crescentus VapBC1 bound to operator DNA 2016-05-30 2016-12-28 Bendtsen, K.L.,Xu, K.,Luckmann, M.,Winther, K.S.,Shah, S.A.,Pedersen, C.N.S.,Brodersen, D.E. Toxin inhibition in C. crescentus VapBC1 is mediated by a flexible pseudo-palindromic protein motif and modulated by DNA binding. Nucleic Acids Res. 2017 45 2875 2886 5LFN 28045385 Crystal structure of human chondroadherin 2016-07-03 2016-12-28 Ramisch, S.,Pramhed, A.,Tillgren, V.,Aspberg, A.,Logan, D.T. Crystal structure of human chondroadherin: solving a difficult molecular-replacement problem using de novo models. Acta Crystallogr D Struct Biol 2017 73 53 63 5M2V 28005385 Structure of GluK1 ligand-binding domain (S1S2) in complex with (2S,4R)-4-(2-carboxyphenoxy)pyrrolidine-2-carboxylic acid at 3.18 A resolution 2016-10-13 2017-01-11 Krogsgaard-Larsen, N.,Delgar, C.G.,Koch, K.,Brown, P.M.,Moller, C.,Han, L.,Huynh, T.H.,Hansen, S.W.,Nielsen, B.,Bowie, D.,Pickering, D.S.,Kastrup, J.S.,Frydenvang, K.,Bunch, L. Design and Synthesis of a Series of l-trans-4-Substituted Prolines as Selective Antagonists for the Ionotropic Glutamate Receptors Including Functional and X-ray Crystallographic Studies of New Subtype Selective Kainic Acid Receptor Subtype 1 (GluK1) Antagonist (2S,4R)-4-(2-Carboxyphenoxy)pyrrolidine-2-carboxylic Acid. J. Med. Chem. 2017 60 441 457 5MNT 28111107 Bacteriophage Qbeta maturation protein 2016-12-13 2017-01-11 Rumnieks, J.,Tars, K. Crystal Structure of the Maturation Protein from Bacteriophage Q beta. J. Mol. Biol. 2017 429 688 696 5T7N 28045386 X-ray crystal structure of AA13 LPMO 2016-09-05 2017-01-11 Frandsen, K.E.,Poulsen, J.C.,Tovborg, M.,Johansen, K.S.,Lo Leggio, L. Learning from oligosaccharide soaks of crystals of an AA13 lytic polysaccharide monooxygenase: crystal packing, ligand binding and active-site disorder. Acta Crystallogr D Struct Biol 2017 73 64 76 5LSV 28045386 X-ray crystal structure of AA13 LPMO 2016-09-05 2017-01-18 Frandsen, K.E.,Poulsen, J.C.,Tovborg, M.,Johansen, K.S.,Lo Leggio, L. Learning from oligosaccharide soaks of crystals of an AA13 lytic polysaccharide monooxygenase: crystal packing, ligand binding and active-site disorder. Acta Crystallogr D Struct Biol 2017 73 64 76 5T7K 28045386 X-ray crystal structure of AA13 LPMO 2016-09-05 2017-01-18 Frandsen, K.E.,Poulsen, J.C.,Tovborg, M.,Johansen, K.S.,Lo Leggio, L. Learning from oligosaccharide soaks of crystals of an AA13 lytic polysaccharide monooxygenase: crystal packing, ligand binding and active-site disorder. Acta Crystallogr D Struct Biol 2017 73 64 76 5I8Q 28416566 S. cerevisiae Prp43 in complex with RNA and ADPNP 2016-02-19 2017-02-01 He, Y.,Staley, J.P.,Andersen, G.R.,Nielsen, K.H. Structure of the DEAH/RHA ATPase Prp43p bound to RNA implicates a pair of hairpins and motif Va in translocation along RNA. RNA 2017 23 1110 1124 5J07 27783493 Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P1/2 2016-03-27 2017-02-01 Wang, H.,Lang, L.,Logan, D.T.,Danielsson, J.,Oliveberg, M. Tricking a Protein To Swap Strands. J. Am. Chem. Soc. 2016 138 15571 15579 5J0C 27783493 Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P2/3 2016-03-28 2017-02-01 Wang, H.,Lang, L.,Logan, D.T.,Danielsson, J.,Oliveberg, M. Tricking a Protein To Swap Strands. J. Am. 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Controlling protein:ligand complex conformation through tuning of arginine-arene interactions: Synthetic and structural studies with 3-benzamido-2-sulfo-galactosides as galectin-3 ligands To Be Published 0 0 0 0 5N04 28364950 X-ray crystal structure of an LPMO 2017-02-02 2017-03-29 Frandsen, K.E.H.,Poulsen, J.N.,Tandrup, T.,Lo Leggio, L. Unliganded and substrate bound structures of the cellooligosaccharide active lytic polysaccharide monooxygenase LsAA9A at low pH. Carbohydr. Res. 2017 448 187 190 5MFQ 28360094 Crystal structure of the GluK1 ligand-binding domain in complex with kainate and BPAM-344 at 1.90 A resolution 2016-11-18 2017-04-12 Larsen, A.P.,Fievre, S.,Frydenvang, K.,Francotte, P.,Pirotte, B.,Kastrup, J.S.,Mulle, C. Identification and Structure-Function Study of Positive Allosteric Modulators of Kainate Receptors. Mol. 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Sci Rep 2017 7 46282 46282 5MIS 28397795 Crystal Structure of Lactococcus lactis Thioredoxin Reductase Exposed to Visible Light (180 min) 2016-11-29 2017-04-12 Skjoldager, N.,Blanner Bang, M.,Rykr, M.,Bjornberg, O.,Davies, M.J.,Svensson, B.,Harris, P.,Hagglund, P. The structure of Lactococcus lactis thioredoxin reductase reveals molecular features of photo-oxidative damage. Sci Rep 2017 7 46282 46282 5MIT 28397795 Crystal Structure of Lactococcus lactis Thioredoxin Reductase Exposed to Visible Light (240 min) 2016-11-29 2017-04-12 Skjoldager, N.,Blanner Bang, M.,Rykr, M.,Bjornberg, O.,Davies, M.J.,Svensson, B.,Harris, P.,Hagglund, P. The structure of Lactococcus lactis thioredoxin reductase reveals molecular features of photo-oxidative damage. Sci Rep 2017 7 46282 46282 5MJK 28397795 Crystal Structure of Lactococcus lactis Thioredoxin Reductase (FO conformation) 2016-12-01 2017-04-12 Skjoldager, N.,Blanner Bang, M.,Rykr, M.,Bjornberg, O.,Davies, M.J.,Svensson, B.,Harris, P.,Hagglund, P. The structure of Lactococcus lactis thioredoxin reductase reveals molecular features of photo-oxidative damage. Sci Rep 2017 7 46282 46282 5M8B Crystal structure of alpha-L-arabinofuranosidase from Lactobacillus brevis 2016-10-28 2017-05-10 Linares-Pasten, J.A.,Falck, P.,Albasri, K.,Kjellstrom, S.,Adlercreutz, P.,Logan, D.T.,Nordberg Karlsson, E. Crystal structure of alpha-L-arabinofuranosidase from Lactobacillus brevis To Be Published 0 0 0 0 5MRH 28462834 Crystal structure of the Vps10p domain of human sortilin/NTS3 in complex with Triazolone 1 2016-12-23 2017-05-17 Andersen, J.L.,Lindberg, S.,Langgard, M.,Maltas, P.J.,Ronn, L.C.B.,Bundgaard, C.,Strandbygaard, D.,Thirup, S.,Watson, S.P. 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Acta Crystallogr F Struct Biol 2017 73 356 362 5NF5 28691798 Structure of GluK1 ligand-binding domain (S1S2) in complex with CIP-AS at 2.85 A resolution 2017-03-13 2017-07-26 Mllerud, S.,Pinto, A.,Marconi, L.,Frydenvang, K.,Thorsen, T.S.,Laulumaa, S.,Venskutonyte, R.,Winther, S.,Moral, A.M.C.,Tamborini, L.,Conti, P.,Pickering, D.S.,Kastrup, J.S. Structure and Affinity of Two Bicyclic Glutamate Analogues at AMPA and Kainate Receptors. ACS Chem Neurosci 2017 8 2056 2064 5NF6 28691798 Structure of GluK3 ligand-binding domain (S1S2) in complex with CIP-AS at 2.55 A resolution 2017-03-13 2017-07-26 Mllerud, S.,Pinto, A.,Marconi, L.,Frydenvang, K.,Thorsen, T.S.,Laulumaa, S.,Venskutonyte, R.,Winther, S.,Moral, A.M.C.,Tamborini, L.,Conti, P.,Pickering, D.S.,Kastrup, J.S. Structure and Affinity of Two Bicyclic Glutamate Analogues at AMPA and Kainate Receptors. 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EstA from Sufolobus islandicus is stabilized by mono-methylation of lysine residues To Be Published 0 0 0 0 5LS2 28874587 Receptor mediated chitin perception in legumes is functionally seperable from Nod factor perception 2016-08-22 2017-08-23 Bozsoki, Z.,Cheng, J.,Feng, F.,Gysel, K.,Vinther, M.,Andersen, K.R.,Oldroyd, G.,Blaise, M.,Radutoiu, S.,Stougaard, J. Receptor-mediated chitin perception in legume roots is functionally separable from Nod factor perception. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5OV9 28867801 Crystal structure of Acetylcholinesterase in complex with Crystal Violet 2017-08-28 2017-09-06 Allgardsson, A.,David Andersson, C.,Akfur, C.,Worek, F.,Linusson, A.,Ekstrom, F. An Unusual Dimeric Inhibitor of Acetylcholinesterase: Cooperative Binding of Crystal Violet. Molecules 2017 22 0 0 5ODJ 29138440 Single-stranded DNA-binding protein from bacteriophage Enc34 2017-07-05 2017-10-25 Cernooka, E.,Rumnieks, J.,Tars, K.,Kazaks, A. Structural Basis for DNA Recognition of a Single-stranded DNA-binding Protein from Enterobacter Phage Enc34. Sci Rep 2017 7 15529 15529 5ODK 29138440 Single-stranded DNA-binding protein from bacteriophage Enc34, C-terminal truncation 2017-07-05 2017-10-25 Cernooka, E.,Rumnieks, J.,Tars, K.,Kazaks, A. Structural Basis for DNA Recognition of a Single-stranded DNA-binding Protein from Enterobacter Phage Enc34. Sci Rep 2017 7 15529 15529 5NLT 29057953 CvAA9A 2017-04-04 2017-11-01 Simmons, T.J.,Frandsen, K.E.H.,Ciano, L.,Tryfona, T.,Lenfant, N.,Poulsen, J.C.,Wilson, L.F.L.,Tandrup, T.,Tovborg, M.,Schnorr, K.,Johansen, K.S.,Henrissat, B.,Walton, P.H.,Lo Leggio, L.,Dupree, P. Structural and electronic determinants of lytic polysaccharide monooxygenase reactivity on polysaccharide substrates. Nat Commun 2017 8 1064 1064 5MJN 28024887 Three dimensional structure of human carbonic anhydrase II in complex with 5-[(4Chlorobenzyl)sulfanyl]thiophene-2-sulfonamide 2016-12-01 2017-12-06 Ivanova, J.,Balode, A.,Zalubovskis, R.,Leitans, J.,Kazaks, A.,Vullo, D.,Tars, K.,Supuran, C.T. 5-Substituted-benzylsulfanyl-thiophene-2-sulfonamides with effective carbonic anhydrase inhibitory activity: Solution and crystallographic investigations. Bioorg. Med. Chem. 2017 25 857 863 5O9A 29256599 Crystal structure of the GluA2 ligand-binding domain (S1S2J-L504Y-N775S) in complex with glutamate and BPAM121 at 1.78 A resolution 2017-06-16 2018-01-03 Goffin, E.,Drapier, T.,Larsen, A.P.,Geubelle, P.,Ptak, C.P.,Laulumaa, S.,Rovinskaja, K.,Gilissen, J.,Tullio, P.,Olsen, L.,Frydenvang, K.,Pirotte, B.,Hanson, J.,Oswald, R.E.,Kastrup, J.S.,Francotte, P. 7-Phenoxy-Substituted 3,4-Dihydro-2H-1,2,4-benzothiadiazine 1,1-Dioxides as Positive Allosteric Modulators of alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid (AMPA) Receptors with Nanomolar Potency. J. Med. Chem. 2018 61 251 264 5OEW 29256599 Crystal structure of the GluA2 ligand-binding domain (S1S2J) in complex with glutamate and positive allosteric modulator BPAM538 2017-07-10 2018-01-03 Goffin, E.,Drapier, T.,Larsen, A.P.,Geubelle, P.,Ptak, C.P.,Laulumaa, S.,Rovinskaja, K.,Gilissen, J.,Tullio, P.,Olsen, L.,Frydenvang, K.,Pirotte, B.,Hanson, J.,Oswald, R.E.,Kastrup, J.S.,Francotte, P. 7-Phenoxy-Substituted 3,4-Dihydro-2H-1,2,4-benzothiadiazine 1,1-Dioxides as Positive Allosteric Modulators of alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid (AMPA) Receptors with Nanomolar Potency. J. Med. Chem. 2018 61 251 264 5O5D 29344086 Cellobiohydrolase Cel7A from T. atroviride 2017-06-01 2018-01-31 Borisova, A.S.,Eneyskaya, E.V.,Jana, S.,Badino, S.F.,Kari, J.,Amore, A.,Karlsson, M.,Hansson, H.,Sandgren, M.,Himmel, M.E.,Westh, P.,Payne, C.M.,Kulminskaya, A.A.,Stahlberg, J. Correlation of structure, function and protein dynamics in GH7 cellobiohydrolases from Trichoderma atroviride, T. reesei and T. harzianum. Biotechnol Biofuels 2018 11 5 5 6F28 29451794 Crystal structure of the kainate receptor GluK3 ligand binding domain in complex with (S)-1-[2'-Amino-2'-carboxyethyl]-6-methyl-5,7-dihydropyrrolo[3,4-d]pyrimidin-2,4(1H,3H)-dione at resolution 2.4A 2017-11-23 2018-02-28 Brogi, S.,Brindisi, M.,Butini, S.,Kshirsagar, G.U.,Maramai, S.,Chemi, G.,Gemma, S.,Campiani, G.,Novellino, E.,Fiorenzani, P.,Pinassi, J.,Aloisi, A.M.,Gynther, M.,Venskutonyte, R.,Han, L.,Frydenvang, K.,Kastrup, J.S.,Pickering, D.S. ( S)-2-Amino-3-(5-methyl-3-hydroxyisoxazol-4-yl)propanoic Acid (AMPA) and Kainate Receptor Ligands: Further Exploration of Bioisosteric Replacements and Structural and Biological Investigation. J. Med. Chem. 2018 61 2124 2130 6F29 29451794 Crystal structure of the kainate receptor GluK3 ligand binding domain in complex with (S)-1-[2-Amino-2-carboxyethyl]-5,7-dihydrothieno[3,4-d]pyrimidin-2,4(1H,3H)-dione at resolution 2.6A 2017-11-23 2018-02-28 Brogi, S.,Brindisi, M.,Butini, S.,Kshirsagar, G.U.,Maramai, S.,Chemi, G.,Gemma, S.,Campiani, G.,Novellino, E.,Fiorenzani, P.,Pinassi, J.,Aloisi, A.M.,Gynther, M.,Venskutonyte, R.,Han, L.,Frydenvang, K.,Kastrup, J.S.,Pickering, D.S. ( S)-2-Amino-3-(5-methyl-3-hydroxyisoxazol-4-yl)propanoic Acid (AMPA) and Kainate Receptor Ligands: Further Exploration of Bioisosteric Replacements and Structural and Biological Investigation. J. Med. Chem. 2018 61 2124 2130 5NBS 30511673 Structural studies of a Glycoside Hydrolase Family 3 beta-glucosidase from the Model Fungus Neurospora crassa 2017-03-02 2018-03-21 Karkehabadi, S.,Hansson, H.,Mikkelsen, N.E.,Kim, S.,Kaper, T.,Sandgren, M.,Gudmundsson, M. Structural studies of a glycoside hydrolase family 3 beta-glucosidase from the model fungus Neurospora crassa. Acta Crystallogr F Struct Biol 2018 74 787 796 5NMV 29532595 Crystal structure of 2F22 Fab fragment against TFPI1 2017-04-07 2018-03-28 Augustsson, C.,Svensson, A.,Kjaer, B.,Chao, T.Y.,Wenjuan, X.,Krogh, B.O.,Breinholt, J.,Clausen, J.T.,Hilden, I.,Petersen, H.H.,Petersen, L.C. Factor Xa and VIIa inhibition by tissue factor pathway inhibitor is prevented by a monoclonal antibody to its Kunitz-1 domain. J. Thromb. Haemost. 2018 16 893 904 6EKI 29685353 Structure of a hyperthermostable carbonic anhydrase identified from an active hydrothermal vent chimney 2017-09-26 2018-04-11 Fredslund, F.,Borchert, M.S.,Poulsen, J.N.,Mortensen, S.B.,Perner, M.,Streit, W.R.,Lo Leggio, L. Structure of a hyperthermostable carbonic anhydrase identified from an active hydrothermal vent chimney. Enzyme Microb. 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Three-dimensional structure of an influenza hemagglutinin LAH protein To Be Published 0 0 0 0 7AU7 34716271 Crystal structure of Nod Factor Perception ectodomain 2020-11-02 2021-11-10 Gysel, K.,Laursen, M.,Thygesen, M.B.,Lironi, D.,Bozsoki, Z.,Hjuler, C.T.,Maolanon, N.N.,Cheng, J.,Bjork, P.K.,Vinther, M.,Madsen, L.H.,Rubsam, H.,Muszynski, A.,Ghodrati, A.,Azadi, P.,Sullivan, J.T.,Ronson, C.W.,Jensen, K.J.,Blaise, M.,Radutoiu, S.,Stougaard, J.,Andersen, K.R. Kinetic proofreading of lipochitooligosaccharides determines signal activation of symbiotic plant receptors. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7R0A 35420233 Structure of sarin phosphonylated acetylcholinesterase in complex with 2-((hydroxyimino)methyl)-1-(5-(4-methyl-3-nitrobenzamido)pentyl)pyridinium 2022-02-01 2022-04-27 Lindgren, C.,Forsgren, N.,Hoster, N.,Akfur, C.,Artursson, E.,Edvinsson, L.,Svensson, R.,Worek, F.,Ekstrom, F.,Linusson, A. Broad-Spectrum Antidote Discovery by Untangling the Reactivation Mechanism of Nerve-Agent-Inhibited Acetylcholinesterase. Chemistry 2022 28 0 0 7R2F 35420233 Structure of tabun inhibited acetylcholinesterase in complex with 2-((hydroxyimino)methyl)-1-(5-(4-methyl-3-nitrobenzamido)pentyl)pyridinium 2022-02-04 2022-04-27 Lindgren, C.,Forsgren, N.,Hoster, N.,Akfur, C.,Artursson, E.,Edvinsson, L.,Svensson, R.,Worek, F.,Ekstrom, F.,Linusson, A. Broad-Spectrum Antidote Discovery by Untangling the Reactivation Mechanism of Nerve-Agent-Inhibited Acetylcholinesterase. Chemistry 2022 28 0 0 7R3C 35420233 VX-inhibited acetylcholinesterase in complex with 2-((hydroxyimino)methyl)-1-(5-(4-methyl-3-nitrobenzamido)pentyl)pyridinium 2022-02-07 2022-04-27 Lindgren, C.,Forsgren, N.,Hoster, N.,Akfur, C.,Artursson, E.,Edvinsson, L.,Svensson, R.,Worek, F.,Ekstrom, F.,Linusson, A. Broad-Spectrum Antidote Discovery by Untangling the Reactivation Mechanism of Nerve-Agent-Inhibited Acetylcholinesterase. Chemistry 2022 28 0 0 7R4E 35420233 RVX-inhibited acetylcholinesterase in complex with 2-((hydroxyimino)methyl)-1-(5-(4-methyl-3-nitrobenzamido)pentyl)pyridinium 2022-02-08 2022-04-27 Lindgren, C.,Forsgren, N.,Hoster, N.,Akfur, C.,Artursson, E.,Edvinsson, L.,Svensson, R.,Worek, F.,Ekstrom, F.,Linusson, A. Broad-Spectrum Antidote Discovery by Untangling the Reactivation Mechanism of Nerve-Agent-Inhibited Acetylcholinesterase. Chemistry 2022 28 0 0 7Q6P Crystal Structure of bacterial Prolyl Peptidyl Isomerase with 5,5'-difluoroleucines 2021-11-09 2022-11-16 Tars, K.,Jaudzems, K.,Recacha, R. Crystal Structure of bacterial Prolyl Peptidyl Isomerase with 5,5'-difluoroleucines To Be Published 0 0 0 0 8Q18 37837260 The Crystal Structure of Human Carbonic Anhydrase IX in Complex with Sulfonamide 2023-07-31 2023-11-08 Leitans, J.,Kazaks, A.,Bogans, J.,Supuran, C.T.,Akopjana, I.,Ivanova, J.,Zalubovskis, R.,Tars, K. Structural Basis of Saccharin Derivative Inhibition of Carbonic Anhydrase IX. Chemmedchem 2023 18 0 0 8Q19 37837260 The Crystal Structure of Human Carbonic Anhydrase IX in Complex with Sulfonamide 2023-07-31 2023-11-08 Leitans, J.,Kazaks, A.,Bogans, J.,Supuran, C.T.,Akopjana, I.,Ivanova, J.,Zalubovskis, R.,Tars, K. Structural Basis of Saccharin Derivative Inhibition of Carbonic Anhydrase IX. Chemmedchem 2023 18 0 0 8Q1A 37837260 The Crystal Structure of Human Carbonic Anhydrase IX in Complex with inhibitor 2023-07-31 2023-11-08 Leitans, J.,Kazaks, A.,Bogans, J.,Supuran, C.T.,Akopjana, I.,Ivanova, J.,Zalubovskis, R.,Tars, K. Structural Basis of Saccharin Derivative Inhibition of Carbonic Anhydrase IX. Chemmedchem 2023 18 0 0 8BST 38145505 Crystal structure of the kainate receptor GluK3-H523A ligand binding domain in complex with kainate at 2.7A resolution 2022-11-26 2023-12-13 Bay, Y.,Venskutonyte, R.,Frantsen, S.M.,Thorsen, T.S.,Musgaard, M.,Frydenvang, K.,Francotte, P.,Pirotte, B.,Biggin, P.C.,Kristensen, A.S.,Boesen, T.,Pickering, D.S.,Gajhede, M.,Kastrup, J.S. Small-molecule positive allosteric modulation of homomeric kainate receptors GluK1-3: development of screening assays and insight into GluK3 structure. Febs J. 2024 291 1506 1529 8BSU Crystal structure of the kainate receptor GluK3-H523A ligand binding domain in complex with kainate and the positive allosteric modulator BPAM344 at 2.9A resolution 2022-11-26 2023-12-13 Bay, Y.,Venskutonyte, R.,Frantsen, S.M.,Thorsen, T.S.,Musgaard, M.,Frydenvang, K.,Francotte, P.,Pirotte, B.,Biggin, P.C.,Kristensen, A.S.,Boesen, T.,Pickering, D.S.,Gajhede, M.,Kastrup, J.S. Positive allosteric modulation of homomeric kainate receptors GluK1-3 To Be Published 0 0 0 0 8ONI Human insulin in complex with the analytical antibody S1 Fab 2023-04-03 2024-04-10 Christoffersen, S.,Baumann, K.,Millner, A.H.,Toft-Hansen, H.,Johansson, E.,Thorlaksen, C.,Skov, P.S. Macromolecular structure of insulin and IgE clonality impacts IgE-mediated activation of sensitized basophils To Be Published 0 0 0 0