PDB_ID PUBMED_CID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS CITATION TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 2QWS 18007033 Neutron and X-ray structural studies of short hydrogen bonds in Photoactive Yellow Protein (PYP) 2007-08-10 2008-03-18 Fisher, S.Z.,Anderson, S.,Henning, R.,Moffat, K.,Langan, P.,Thiyagarajan, P.,Schultz, A.J. Neutron and X-ray structural studies of short hydrogen bonds in photoactive yellow protein (PYP) Acta Crystallogr.,Sect.D 2007 63 1178 1184 3CWH 18578508 D-xylose Isomerase in complex with linear product, per-deuterated xylulose 2008-04-21 2008-08-05 Kovalevsky, A.Y.,Katz, A.K.,Carrell, H.L.,Hanson, L.,Mustyakimov, M.,Fisher, S.Z.,Coates, L.,Schoenborn, B.P.,Bunick, G.J.,Glusker, J.P.,Langan, P. Hydrogen location in stages of an enzyme-catalyzed reaction: time-of-flight neutron structure of D-xylose isomerase with bound D-xylulose Biochemistry 2008 47 7595 7597 3KMF 20230836 Room Temperature Time-of-Flight Neutron Diffraction Study of Deoxy Human Normal Adult Hemoglobin 2009-11-10 2010-04-21 Kovalevsky, A.Y.,Chatake, T.,Shibayama, N.,Park, S.Y.,Ishikawa, T.,Mustyakimov, M.,Fisher, Z.,Langan, P.,Morimoto, Y. Direct Determination of Protonation States of Histidine Residues in a 2 A Neutron Structure of Deoxy-Human Normal Adult Hemoglobin and Implications for the Bohr Effect. J.Mol.Biol. 2010 398 276 291 3L45 20351252 A Joint Neutron and X-ray structure of Oxidized Amicyanin 2009-12-18 2010-04-28 Sukumar, N.,Mathews, F.S.,Langan, P.,Davidson, V.L. A joint x-ray and neutron study on amicyanin reveals the role of protein dynamics in electron transfer. Proc.Natl.Acad.Sci.USA 2010 107 6817 6822 3L45 20351252 A Joint Neutron and X-ray structure of Oxidized Amicyanin 2009-12-18 2010-04-28 Sukumar, N.,Mathews, F.S.,Langan, P.,Davidson, V.L. A joint x-ray and neutron study on amicyanin reveals the role of protein dynamics in electron transfer. Proc.Natl.Acad.Sci.USA 2010 107 6817 6822 3KCO 20541506 Room temperature neutron structure of D-Xylose Isomerase in complex with two Ni2+ cations and d12-D-glucose in the linear form (refined jointly with X-ray structure 3KBN) 2009-10-21 2010-06-16 Kovalevsky, A.Y.,Hanson, L.,Fisher, S.Z.,Mustyakimov, M.,Mason, S.A.,Forsyth, V.T.,Blakeley, M.P.,Keen, D.A.,Wagner, T.,Carrell, H.L.,Katz, A.K.,Glusker, J.P.,Langan, P. Metal ion roles and the movement of hydrogen during reaction catalyzed by D-xylose isomerase: a joint x-ray and neutron diffraction study. Structure 2010 18 688 699 3KCO 20541506 Room temperature neutron structure of D-Xylose Isomerase in complex with two Ni2+ cations and d12-D-glucose in the linear form (refined jointly with X-ray structure 3KBN) 2009-10-21 2010-06-16 Kovalevsky, A.Y.,Hanson, L.,Fisher, S.Z.,Mustyakimov, M.,Mason, S.A.,Forsyth, V.T.,Blakeley, M.P.,Keen, D.A.,Wagner, T.,Carrell, H.L.,Katz, A.K.,Glusker, J.P.,Langan, P. Metal ion roles and the movement of hydrogen during reaction catalyzed by D-xylose isomerase: a joint x-ray and neutron diffraction study. Structure 2010 18 688 699 3QZA 21604345 Joint neutron and X-ray structure of apo-D-Xylose Isomerase at pH=5.9 2011-03-04 2011-08-17 Kovalevsky, A.Y.,Hanson, B.L.,Mason, S.A.,Yoshida, T.,Fisher, S.Z.,Mustyakimov, M.,Forsyth, V.T.,Blakeley, M.P.,Keen, D.A.,Langan, P. Identification of the Elusive Hydronium Ion Exchanging Roles with a Proton in an Enzyme at Lower pH Values. Angew.Chem.Int.Ed.Engl. 2011 50 7520 7523 3QZA 21604345 Joint neutron and X-ray structure of apo-D-Xylose Isomerase at pH=5.9 2011-03-04 2011-08-17 Kovalevsky, A.Y.,Hanson, B.L.,Mason, S.A.,Yoshida, T.,Fisher, S.Z.,Mustyakimov, M.,Forsyth, V.T.,Blakeley, M.P.,Keen, D.A.,Langan, P. Identification of the Elusive Hydronium Ion Exchanging Roles with a Proton in an Enzyme at Lower pH Values. Angew.Chem.Int.Ed.Engl. 2011 50 7520 7523 3Q3L 23192028 The neutron crystallographic structure of inorganic pyrophosphatase from Thermococcus thioreducens 2010-12-22 2012-02-08 Hughes, R.C.,Coates, L.,Blakeley, M.P.,Tomanicek, S.J.,Langan, P.,Kovalevsky, A.Y.,Garcia-Ruiz, J.M.,Ng, J.D. Inorganic pyrophosphatase crystals from Thermococcus thioreducens for X-ray and neutron diffraction. Acta Crystallogr.,Sect.F 2012 68 1482 1487 4FC1 22949690 Ultra-high resolution neutron structure of crambin at room-temperature 2012-05-23 2012-09-19 Chen, J.C.,Hanson, B.L.,Fisher, S.Z.,Langan, P.,Kovalevsky, A.Y. Direct observation of hydrogen atom dynamics and interactions by ultrahigh resolution neutron protein crystallography. Proc.Natl.Acad.Sci.USA 2012 109 15301 15306 4QDP 25132082 Joint X-ray and neutron structure of Streptomyces rubiginosus D-xylose isomerase in complex with two Cd2+ ions and cyclic beta-L-arabinose 2014-05-14 2014-09-03 Langan, P.,Sangha, A.K.,Wymore, T.,Parks, J.M.,Yang, Z.K.,Hanson, B.L.,Fisher, Z.,Mason, S.A.,Blakeley, M.P.,Forsyth, V.T.,Glusker, J.P.,Carrell, H.L.,Smith, J.C.,Keen, D.A.,Graham, D.E.,Kovalevsky, A. L-Arabinose Binding, Isomerization, and Epimerization by D-Xylose Isomerase: X-Ray/Neutron Crystallographic and Molecular Simulation Study. Structure 2014 22 1287 1300 4QDP 25132082 Joint X-ray and neutron structure of Streptomyces rubiginosus D-xylose isomerase in complex with two Cd2+ ions and cyclic beta-L-arabinose 2014-05-14 2014-09-03 Langan, P.,Sangha, A.K.,Wymore, T.,Parks, J.M.,Yang, Z.K.,Hanson, B.L.,Fisher, Z.,Mason, S.A.,Blakeley, M.P.,Forsyth, V.T.,Glusker, J.P.,Carrell, H.L.,Smith, J.C.,Keen, D.A.,Graham, D.E.,Kovalevsky, A. L-Arabinose Binding, Isomerization, and Epimerization by D-Xylose Isomerase: X-Ray/Neutron Crystallographic and Molecular Simulation Study. Structure 2014 22 1287 1300 4Y0J 25902526 H/D exchanged human carbonic anhydrase II pH 6 room temperature neutron crystal structure. 2015-02-06 2015-04-22 Michalczyk, R.,Unkefer, C.J.,Bacik, J.P.,Schrader, T.E.,Ostermann, A.,Kovalevsky, A.Y.,McKenna, R.,Fisher, S.Z. Joint neutron crystallographic and NMR solution studies of Tyr residue ionization and hydrogen bonding: Implications for enzyme-mediated proton transfer. Proc.Natl.Acad.Sci.USA 2015 112 5673 5678 4S2D 26392527 Joint X-ray/neutron structure of Trichoderma reesei xylanase II in complex with MES at pH 5.7 2015-01-20 2015-09-23 Wan, Q.,Parks, J.M.,Hanson, B.L.,Fisher, S.Z.,Ostermann, A.,Schrader, T.E.,Graham, D.E.,Coates, L.,Langan, P.,Kovalevsky, A. Direct determination of protonation states and visualization of hydrogen bonding in a glycoside hydrolase with neutron crystallography. Proc.Natl.Acad.Sci.USA 2015 112 12384 12389 4S2D 26392527 Joint X-ray/neutron structure of Trichoderma reesei xylanase II in complex with MES at pH 5.7 2015-01-20 2015-09-23 Wan, Q.,Parks, J.M.,Hanson, B.L.,Fisher, S.Z.,Ostermann, A.,Schrader, T.E.,Graham, D.E.,Coates, L.,Langan, P.,Kovalevsky, A. Direct determination of protonation states and visualization of hydrogen bonding in a glycoside hydrolase with neutron crystallography. Proc.Natl.Acad.Sci.USA 2015 112 12384 12389 4XPV 26392527 Neutron and X-ray structure analysis of xylanase: N44D at pH6 2015-01-18 2015-09-30 Wan, Q.,Parks, J.M.,Hanson, B.L.,Fisher, S.Z.,Ostermann, A.,Schrader, T.E.,Graham, D.E.,Coates, L.,Langan, P.,Kovalevsky, A. Direct determination of protonation states and visualization of hydrogen bonding in a glycoside hydrolase with neutron crystallography. Proc.Natl.Acad.Sci.USA 2015 112 12384 12389 4XPV 26392527 Neutron and X-ray structure analysis of xylanase: N44D at pH6 2015-01-18 2015-09-30 Wan, Q.,Parks, J.M.,Hanson, B.L.,Fisher, S.Z.,Ostermann, A.,Schrader, T.E.,Graham, D.E.,Coates, L.,Langan, P.,Kovalevsky, A. Direct determination of protonation states and visualization of hydrogen bonding in a glycoside hydrolase with neutron crystallography. Proc.Natl.Acad.Sci.USA 2015 112 12384 12389 5C6E 27377386 Joint X-ray/neutron structure of equine cyanomet hemoglobin in R state 2015-06-22 2016-06-22 Dajnowicz, S.,Seaver, S.,Hanson, B.L.,Fisher, S.Z.,Langan, P.,Kovalevsky, A.Y.,Mueser, T.C. Visualizing the Bohr effect in hemoglobin: neutron structure of equine cyanomethemoglobin in the R state and comparison with human deoxyhemoglobin in the T state. Acta Crystallogr D Struct Biol 2016 72 892 903 5C6E 27377386 Joint X-ray/neutron structure of equine cyanomet hemoglobin in R state 2015-06-22 2016-06-22 Dajnowicz, S.,Seaver, S.,Hanson, B.L.,Fisher, S.Z.,Langan, P.,Kovalevsky, A.Y.,Mueser, T.C. Visualizing the Bohr effect in hemoglobin: neutron structure of equine cyanomethemoglobin in the R state and comparison with human deoxyhemoglobin in the T state. Acta Crystallogr D Struct Biol 2016 72 892 903