PDB_ID PUBMED_CID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS CITATION TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 1DKF 10882070 CRYSTAL STRUCTURE OF A HETERODIMERIC COMPLEX OF RAR AND RXR LIGAND-BINDING DOMAINS 1999-12-07 2000-04-19 Bourguet, W.,Vivat, V.,Wurtz, J.M.,Chambon, P.,Gronemeyer, H.,Moras, D. Crystal structure of a heterodimeric complex of RAR and RXR ligand-binding domains. Mol.Cell 2000 5 289 298 1FGX 10393171 CRYSTAL STRUCTURE OF THE BOVINE BETA 1,4 GALACTOSYLTRANSFERASE (B4GALT1) CATALYTIC DOMAIN COMPLEXED WITH UMP 2000-07-29 2000-08-16 Gastinel, L.N.,Cambillau, C.,Bourne, Y. Crystal structures of the bovine beta4galactosyltransferase catalytic domain and its complex with uridine diphosphogalactose. EMBO J. 1999 18 3546 3557 1E0P 10949307 L intermediate of bacteriorhodopsin 2000-04-04 2000-08-19 Royant, A.,Edman, K.,Ursby, T.,Pebay-Peyroula, E.,Landau, E.M.,Neutze, R. 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The crystal structure and mode of action of trans-sialidase, a key enzyme of Trypanosoma cruzi pathogenesis Mol.Cell 2002 10 757 768 1OA2 12649442 Comparison of Family 12 Glycoside Hydrolases and Recruited Substitutions Important for Thermal Stability 2002-12-28 2003-03-27 Sandgren, M.,Gualfetti, P.J.,Shaw, A.,Gross, L.S.,Saldajeno, M.,Day, A.G.,Jones, T.A.,Mitchinson, C. Comparison of Family 12 Glycoside Hydrolases and Recruited Substitutions Important for Thermal Stability Protein Sci. 2003 12 848 0 1OOQ 12954054 Nitroreductase from e-coli in complex with the inhibitor dicoumarol 2003-03-04 2003-04-02 Johansson, E.,Parkinson, G.N.,Denny, W.A.,Neidle, S. Studies on the Nitroreductase Prodrug-Activating System. 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Biochemistry 2003 42 5706 5712 1OEM 12802338 PTP1B with the catalytic cysteine oxidized to a sulfenyl-amide bond 2003-03-28 2003-06-12 Salmeen, A.,Andersen, J.N.,Myers, M.P.,Meng, T.C.,Hinks, J.A.,Tonks, N.K.,Barford, D. Redox Regulation of Protein Tyrosine Phosphatase Involves a Sulfenyl-Amide Intermediate Nature 2003 423 769 0 1P7B 12738871 Crystal structure of an inward rectifier potassium channel 2003-05-01 2003-06-17 Kuo, A.,Gulbis, J.M.,Antcliff, J.F.,Rahman, T.,Lowe, E.D.,Zimmer, J.,Cuthbertson, J.,Ashcroft, F.M.,Ezaki, T.,Doyle, D.A. Crystal structure of the potassium channel KirBac1.1 in the closed state. Science 2003 300 1922 1926 1HKU 12805226 CtBP/BARS: a dual-function protein involved in transcription corepression and Golgi membrane fission 2003-03-11 2003-06-19 Nardini, M.,Spano, S.,Cericola, C.,Pesce, A.,Massaro, A.,Millo, E.,Luini, A.,Corda, D.,Bolognesi, M. 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J.Bacteriol. 2003 185 4050 4056 1H1O 12737820 Acidithiobacillus ferrooxidans cytochrome c4 structure supports a complex-induced tuning of electron transfer 2002-07-19 2003-07-17 Abergel, C.,Nitschke, W.,Malarte, G.,Bruschi, M.,Claverie, J.-M.,Guidici-Orticoni, M.-T. The Structure of Acidithiobacillus Ferrooxidans C(4)-Cytochrome. A Model for Complex-Induced Electron Transfer Tuning Structure 2003 11 547 0 1H1W 12169624 High resolution crystal structure of the human PDK1 catalytic domain 2002-07-23 2003-07-17 Biondi, R.M.,Komander, D.,Thomas, C.C.,Lizcano, J.M.,Deak, M.,Alessi, D.R.,Van Aalten, D.M.F. High Resolution Crystal Structure of the Human Pdk1 Catalytic Domain Defines the Regulatory Phosphopeptide Docking Site Embo J. 2003 21 4219 0 1P4T 12716881 Crystal structure of Neisserial surface protein A (NspA) 2003-04-24 2003-07-22 Vandeputte-Rutten, L.,Bos, M.P.,Tommassen, J.,Gros, P. Crystal structure of Neisserial Surface Protein A (NspA), a conserved outer membrane protein with vaccine potential J.Biol.Chem. 2003 278 24825 24830 1OFZ 12732625 Crystal structure of fungal lectin : six-bladed beta-propeller fold and novel fucose recognition mode for aleuria aurantia lectin 2003-04-22 2003-07-24 Wimmerova, M.,Mitchell, E.,Sanchez, J.F.,Gautier, C.,Imberty, A. Crystal Structure of Fungal Lectin: Six-Bladed {Beta}-Propeller Fold and Novel Fucose Recognition Mode for Aleuria Aurantia Lectin J.Biol.Chem. 2003 278 27059 0 1P5H 12839984 Crystal structure of Formyl-CoA Transferase (apoenzyme) from Oxalobacter formigenes 2003-04-27 2003-07-29 Ricagno, S.,Jonsson, S.,Richards, N.,Lindqvist, Y. Formyl-CoA Transferase encloses the CoA binding site at the interface of an interlocked dimer Embo J. 2003 22 3210 3219 1OS9 12813751 Binary enzyme-product complexes of human MMP12 2003-03-19 2003-08-05 Bertini, I.,Calderone, V.,Fragai, M.,Luchinat, C.,Mangani, S.,Terni, B. 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The Structure of the Jab1/Mpn Domain and its Implications for Proteasome Function Biochemistry 2003 42 11460 0 1P0Z 12867417 Sensor Kinase CitA binding domain 2003-04-11 2003-08-19 Reinelt, S.,Hofmann, E.,Gerharz, T.,Bott, M.,Madden, D.R. The structure of the periplasmic ligand-binding domain of the sensor kinase CitA reveals the first extracellular PAS domain. J.Biol.Chem. 2003 278 39189 39196 1O57 12837783 CRYSTAL STRUCTURE OF THE PURINE OPERON REPRESSOR OF BACILLUS SUBTILIS 2003-04-20 2003-08-26 Sinha, S.C.,Krahn, J.,Shin, B.S.,Tomchick, D.R.,Zalkin, H.,Smith, J.L. The Purine Repressor of Bacillus Subtilis: A Novel Combination of Domains Adapted for Transcription Regulation J.Bacteriol. 2003 185 4087 4098 1MMK 14568534 Crystal structure of ternary complex of the catalytic domain of human phenylalanine hydroxylase ((FeII)) complexed with tetrahydrobiopterin and thienylalanine 2002-09-04 2003-09-04 Andersen, O.A.,Stokka, A.J.,Flatmark, T.,Hough, E. 2.0A resolution crystal structures of the ternary complexes of human phenylalanine hydroxylase catalytic domain with tetrahydrobiopterin and 3-(2-thienyl)-L-alanine or L-norleucine: substrate specificity and molecular motions related to substrate binding J.Mol.Biol. 2003 333 747 757 1OGM 12962629 Dex49A from Penicillium minioluteum 2003-05-07 2003-09-11 Larsson, A.M.,Andersson, R.,Stahlberg, J.,Kenne, L.,Jones, T.A. Dextranase from Penicillium Minioluteum. 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Structural Basis of Aurora-A Activation by Tpx2 at the Mitotic Spindle Mol.Cell 2003 12 851 0 1UNN 14592985 Complex of beta-clamp processivity factor and little finger domain of PolIV 2003-09-11 2003-11-06 Bunting, K.A.,Roe, S.M.,Pearl, L.H. Structural Basis for Recruitment of Translesion DNA Polymerase Pol Iv/Dinb to the Beta-Clamp Embo J. 2003 22 5883 0 1R3N 14534321 Crystal structure of beta-alanine synthase from Saccharomyces kluyveri 2003-10-02 2003-11-11 Lundgren, S.,Gojkovic, Z.,Piskur, J.,Dobritzsch, D. Yeast beta-Alanine Synthase Shares a Structural Scaffold and Origin with Dizinc-dependent Exopeptidases J.Biol.Chem. 2003 278 51851 51862 1PO0 12948487 Crystal structure of ferric citrate transporter FecA in complex with iron-free citrate 2003-06-13 2003-11-18 Yue, W.W.,Grizot, S.,Buchanan, S.K. 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Structure of human Inositol 1,3,4-trisphosphate 5/6-kinase To be Published 0 0 0 0 2J6B 17241456 crystal structure of AFV3-109, a highly conserved protein from crenarchaeal viruses 2006-09-27 2007-02-20 Keller, J.,Leulliot, N.,Cambillau, C.,Campanacci, V.,Porciero, S.,Prangishvili, D.,Forterre, P.,Cortez, D.,Quevillon-Cheruel, S.,Van Tilbeurgh, H. Crystal Structure of Afv3-109, a Highly Conserved Protein from Crenarchaeal Viruses. Virol J. 2007 4 12 0 2J6C 17241456 crystal structure of AFV3-109, a highly conserved protein from crenarchaeal viruses 2006-09-27 2007-02-20 Keller, J.,Leulliot, N.,Cambillau, C.,Campanacci, V.,Porciero, S.,Prangishvili, D.,Forterre, P.,Cortez, D.,Quevillon-Cheruel, S.,Van Tilbeurgh, H. Crystal Structure of Afv3-109, a Highly Conserved Protein from Crenarchaeal Viruses. Virol J. 2007 4 12 0 2JCB 17329806 The crystal structure of 5-formyl-tetrahydrofolate cycloligase from Bacillus anthracis (BA4489) 2006-12-21 2007-02-20 Meier, C.,Carter, L.G.,Winter, G.,Owens, R.J.,Stuart, D.I.,Esnouf, R.M. Structure of 5-Formyltetrahydrofolate Cyclo-Ligase from Bacillus Anthracis (Ba4489). Acta Crystallogr.,Sect.F 2007 63 168 0 2C4M Starch phosphorylase: structural studies explain oxyanion-dependent kinetic stability and regulatory control. 2005-10-20 2007-02-27 Purvis, A.,Nidetzky, B.,Watson, K. Starch Phosphorylase: Structural Studies Explain Oxyanion-Dependent Kinetic Stability and Regulatory Control To be Published 0 0 0 0 2CG7 17368672 SECOND AND THIRD FIBRONECTIN TYPE I MODULE PAIR (CRYSTAL FORM II). 2006-02-27 2007-02-27 Rudino-Pinera, E.,Ravelli, R.B.G.,Sheldrick, G.M.,Nanao, M.H.,Korostelev, V.V.,Werner, J.M.,Schwarz-Linek, U.,Potts, J.R.,Garman, E.F. The Solution and Crystal Structures of a Module Pair from the Staphylococcus Aureus-Binding Site of Human Fibronectin-A Tale with a Twist. J.Mol.Biol. 2007 368 833 0 2O4G 17355961 Structure of TREX1 in complex with a nucleotide 2006-12-04 2007-03-13 Brucet, M.,Querol-Audi, J.,Serra, M.,Ramirez-Espain, X.,Bertlik, K.,Ruiz, L.,Lloberas, J.,Macias, M.J.,Fita, I.,Celada, A. Structure of the dimeric exonuclease TREX1 in complex with DNA displays a proline-rich binding site for WW Domains. J.Biol.Chem. 2007 282 14547 14557 2OHK 17315856 X-ray crystal structure of beta secretase complexed with 1-amino-isoquinoline 2007-01-10 2007-03-13 Murray, C.W.,Callaghan, O.,Chessari, G.,Cleasby, A.,Congreve, M.,Frederickson, M.,Hartshorn, M.J.,McMenamin, R.,Patel, S.,Wallis, N. Application of fragment screening by X-ray crystallography to beta-Secretase. J.Med.Chem. 2007 50 1116 1123 2P0U crystal structure of Marchantia polymorpha stilbenecarboxylate synthase 2 (STCS2) 2007-03-01 2007-03-13 Borel, F.,Schroeder, G.,Schroeder, J.,Ferrer, J.-L. crystal structure of Marchantia polymorpha stilbenecarboxylate synthase 2 (STCS2) To be Published 0 0 0 0 2GA8 18004758 Crystal structure of YFH7 from Saccharomyces cerevisiae: a putative P-loop containing kinase with a circular permutation. 2006-03-08 2007-03-20 Gueguen-Chaignon, V.,Chaptal, V.,Lariviere, L.,Costa, N.,Lopes, P.,Morera, S.,Nessler, S. Crystal structure and functional analysis identify the P-loop containing protein YFH7 of Saccharomyces cerevisiae as an ATP-dependent kinase. Proteins 2007 71 804 812 2J8A X-ray structure of the N-terminus RRM domain of Set1 2006-10-24 2007-03-20 Tresaugues, L.,Dehe, P.M.,Guerois, R.,Rodriguez-Gil, A.,Varlet, I.,Salah, P.,Pamblanco, M.,Luciano, P.,Quevillon-Cheruel, S.,Sollier, J.,Leulliot, N.,Couprie, J.,Tordera, V.,Zinn-Justin, S.,Chavez, S.,Van Tilbeurgh, H.,Geli, V. X-Ray Structure of the N-Terminus Rrm Domain of Set1 To be Published 0 0 0 0 2JEN 17376777 Family 12 xyloglucanase from Bacillus licheniformis in complex with ligand 2007-01-18 2007-03-20 Gloster, T.M.,Ibatullin, F.M.,Macauley, K.,Eklof, J.M.,Roberts, S.,Turkenburg, J.P.,Bjornvad, M.E.,Jorgensen, P.L.,Danielsen, S.,Johansen, K.S.,Borchert, T.V.,Wilson, K.S.,Brumer, H.,Davies, G.J. Characterization and Three-Dimensional Structures of Two Distinct Bacterial Xyloglucanases from Families Gh5 and Gh12. 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J.Biol.Chem. 2007 282 20705 20714 2OWC 17420245 Structure of a covalent intermediate in Thermus thermophilus amylomaltase 2007-02-16 2007-04-03 Barends, T.R.,Bultema, J.B.,Kaper, T.,van der Maarel, M.J.,Dijkhuizen, L.,Dijkstra, B.W. Three-way stabilization of the covalent intermediate in amylomaltase, an alpha-amylase-like transglycosylase. J.Biol.Chem. 2007 282 17242 17249 2P6S 17374605 Crystal Structure of Transcriptional Regulator NMB0573/L-Met Complex from Neisseria Meningitidis 2007-03-19 2007-04-03 Ren, J.,Sainsbury, S.,Combs, S.E.,Capper, R.G.,Jordan, P.W.,Berrow, N.S.,Stammers, D.K.,Saunders, N.J.,Owens, R.J. The Structure and Transcriptional Analysis of a Global Regulator from Neisseria meningitidis. 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Science 2007 316 449 453 2OHP 17315857 X-ray crystal structure of beta secretase complexed with compound 3 2007-01-10 2007-05-01 Congreve, M.,Aharony, D.,Albert, J.,Callaghan, O.,Campbell, J.,Carr, R.A.,Chessari, G.,Cowan, S.,Edwards, P.D.,Frederickson, M.,McMenamin, R.,Murray, C.W.,Patel, S.,Wallis, N. Application of fragment screening by X-ray crystallography to the discovery of aminopyridines as inhibitors of beta-secretase. J.Med.Chem. 2007 50 1124 1132 2OK4 17475620 Crystal structure of aromatic amine dehydrogenase TTQ-phenylacetaldehyde adduct oxidized with ferricyanide 2007-01-16 2007-05-01 Roujeinikova, A.,Hothi, P.,Masgrau, L.,Sutcliffe, M.J.,Scrutton, N.S.,Leys, D. New insights into the reductive half-reaction mechanism of aromatic amine dehydrogenase revealed by reaction with carbinolamine substrates. 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J.Biol.Chem. 2007 282 23194 23204 2IBS 17455934 Crystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing 2-aminopurine at the target position 2006-09-12 2007-05-29 Lenz, T.,Bonnist, E.Y.M.,Pljevaljcic, G.,Neely, R.K.,Dryden, D.T.F.,Scheidig, A.J.,Jones, A.C.,Weinhold, E. 2-Aminopurine Flipped into the Active Site of the Adenine-Specific DNA Methyltransferase M.TaqI: Crystal Structures and Time-Resolved Fluorescence J.Am.Chem.Soc. 2007 129 6240 6248 2PXA 17622627 Crystal structure of the Murray Valley Encephalitis Virus NS5 2'-O Methyltransferase domain in complex with SAH and GTPG 2007-05-14 2007-05-29 Assenberg, R.,Ren, J.,Verma, A.,Walter, T.S.,Alderton, D.,Hurrelbrink, R.J.,Fuller, S.D.,Bressanelli, S.,Owens, R.J.,Stuart, D.I.,Grimes, J.M. Crystal structure of the Murray Valley encephalitis virus NS5 methyltransferase domain in complex with cap analogues. 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Proteins 2007 71 1721 1731 2J9X 17559232 Tryptophan Synthase in complex with GP, alpha-D,L-glycerol-phosphate, Cs, pH6.5 - alpha aminoacrylate form - (GP)E(A-A) 2006-11-16 2007-06-26 Ngo, H.,Kimmich, N.,Harris, R.,Niks, D.,Blumenstein, L.,Kulik, V.,Barends, T.R.,Schlichting, I.,Dunn, M.F. Allosteric Regulation of Substrate Channeling in Tryptophan Synthase: Modulation of the L-Serine Reaction in Stage I of the Beta-Reaction by Alpha-Site Ligands. Biochemistry 2007 46 7740 0 2PE8 17589525 Crystal structure of the UHM domain of human SPF45 (free form) 2007-04-02 2007-06-26 Corsini, L.,Bonna, S.,Basquin, J.,Hothorn, M.,Scheffzek, K.,Valcarcel, J.,Sattler, M. U2AF-homology motif interactions are required for alternative splicing regulation by SPF45. Nat.Struct.Mol.Biol. 2007 14 620 629 2UUV 17562315 alkyldihydroxyacetonephosphate synthase in P1 2007-03-07 2007-06-26 Razeto, A.,Mattiroli, F.,Carpanelli, E.,Aliverti, A.,Pandini, V.,Coda, A.,Mattevi, A. The Crucial Step in Ether Phospholipid Biosynthesis: Structural Basis of a Noncanonical Reaction Associated with a Peroxisomal Disorder. Structure 2007 15 683 0 2V38 Family 5 endoglucanase Cel5A from Bacillus agaradhaerens in complex with cellobio-derived noeuromycin 2007-06-13 2007-06-26 Meloncelli, P.J.,Gloster, T.M.,Money, V.A.,Tarling, C.A.,Davies, G.J.,Withers, S.G.,Stick, R.V. D-Glucosylated Derivatives of Isofagomine and Noeuromycin and Their Potential as Inhibitors of Beta-Glycoside Hydrolases To be Published 0 0 0 0 2V2K 17577575 THE CRYSTAL STRUCTURE OF FDXA, A 7FE FERREDOXIN FROM MYCOBACTERIUM SMEGMATIS 2007-06-06 2007-07-03 Ricagno, S.,De Rosa, M.,Aliverti, A.,Zanetti, G.,Bolognesi, M. The Crystal Structure of Fdxa, a 7Fe Ferredoxin from Mycobacterium Smegmatis. Biochem.Biophys.Res.Commun. 2007 360 97 0 2PHF 17556509 Pterocarpus angolensis lectin complexed with Man-6 2007-04-11 2007-07-10 Garcia-Pino, A.,Buts, L.,Wyns, L.,Imberty, A.,Loris, R. How a plant lectin recognizes high mannose oligosaccharides Plant Physiol. 2007 144 1733 1741 2JIB 17637344 X-ray structure of Oxalyl-CoA decarboxylase in complex with coenzyme- A 2007-02-26 2007-07-17 Berthold, C.L.,Toyota, C.G.,Moussatche, P.,Wood, M.D.,Leeper, F.,Richards, N.G.J.,Lindqvist, Y. Crystallographic Snapshots of Oxalyl-Coa Decarboxylase Give Insights Into Catalysis by Nonoxidative Thdp-Dependent Decarboxylases Structure 2007 15 853 0 2O89 17368484 S. aureus thioredoxin P31T/C32S mutant 2006-12-12 2007-07-24 Roos, G.,Garcia-Pino, A.,Van Belle, K.,Brosens, E.,Wahni, K.,Vandenbussche, G.,Wyns, L.,Loris, R.,Messens, J. The conserved active site proline determines the reducing power of Staphylococcus aureus thioredoxin J.Mol.Biol. 2007 368 800 811 2UZ1 17620706 1.65 Angstrom structure of Benzaldehyde Lyase complexed with 2-methyl- 2,4-pentanediol 2007-04-23 2007-07-24 Maraite, A.,Schmidt, T.,Ansorge-Schumacher, M.B.,Brzozowski, A.M.,Grogan, G. Structure of the Thdp-Dependent Enzyme Benzaldehyde Lyase Refined to 1.65 A Resolution. Acta Crystallogr.,Sect.F 2007 63 546 0 2V1L 18300248 Structure of the conserved hypothetical protein VC1805 from pathogenicity island VPI-2 of Vibrio cholerae O1 biovar eltor str. N16961 shares structural homology with the human P32 protein 2007-05-25 2007-07-24 Sheikh, M.A.,Potter, J.A.,Johnson, K.A.,Sim, R.B.,Boyd, E.F.,Taylor, G.L. Crystal Structure of Vc1805, a Conserved Hypothetical Protein from a Vibrio Cholerae Pathogenicity Island, Reveals Homology to Human P32. Proteins 2008 71 1563 0 2V63 17824672 Crystal structure of Rubisco from Chlamydomonas reinhardtii with a large-subunit V331A mutation 2007-07-13 2007-07-31 Karkehabadi, S.,Satagopan, S.,Taylor, T.C.,Spreitzer, R.J.,Andersson, I. Structural Analysis of Altered Large-Subunit Loop-6-Carboxy-Terminus Interactions that Influence Catalytic Efficiency and Co2 O2 Specificity of Ribulose-1,5-Bisphosphate Carboxylase Oxygenase Biochemistry 2007 46 11080 0 2JG3 17654629 MtaqI with BAZ 2007-02-07 2007-08-07 Pljevaljcic, G.,Schmidt, F.,Scheidig, A.J.,Lurz, R.,Weinhold, E. Quantitative Labeling of Long Plasmid DNA with Nanometer Precision. Chembiochem 2007 8 1516 0 2V67 17824672 Crystal structure of Chlamydomonas reinhardtii Rubisco with a large- subunit supressor mutation T342I 2007-07-13 2007-08-07 Karkehabadi, S.,Satagopan, S.,Taylor, T.C.,Spreitzer, R.J.,Andersson, I. Structural Analysis of Altered Large-Subunit Loop-6-Carboxy-Terminus Interactions that Influence Catalytic Efficiency and Co2 O2 Specificity of Ribulose-1,5-Bisphosphate Carboxylase Oxygenase Biochemistry 2007 46 11080 0 2V78 19018105 Crystal structure of Sulfolobus solfataricus 2-keto-3-deoxygluconate kinase 2007-07-27 2007-08-07 Potter, J.A.,Kerou, M.,Lamble, H.J.,Bull, S.D.,Hough, D.W.,Danson, M.J.,Taylor, G.L. The Structure of Sulfolobus Solfataricus 2-Keto-3-Deoxygluconate Kinase. Acta Crystallogr.,Sect.D 2008 64 1283 0 2JJ2 17698806 The Structure of F1-ATPase inhibited by quercetin. 2007-07-03 2007-08-21 Gledhill, J.R.,Montgomery, M.G.,Leslie, A.G.W.,Walker, J.E. Mechanism of Inhibition of Bovine F1-ATPase by Resveratrol and Related Polyphenols. Proc.Natl.Acad.Sci.USA 2007 104 13632 0 2IQF 17358056 Crystal structure of Helicobacter pylori catalase compound I 2006-10-13 2007-08-28 Alfonso-Prieto, M.,Borovik, A.,Carpena, X.,Murshudov, G.,Melik-Adamyan, W.,Fita, I.,Rovira, C.,Loewen, P.C. The structures and electronic configuration of compound I intermediates of Helicobacter pylori and Penicillium vitale catalases determined by X-ray crystallography and QM/MM density functional theory calculations. J.Am.Chem.Soc. 2007 129 4193 4205 2NTB 17717531 Crystal structure of pectin methylesterase in complex with hexasaccharide V 2006-11-07 2007-09-18 Fries, M.,Ihrig, J.,Brocklehurst, K.,Shevchik, V.E.,Pickersgill, R.W. Molecular basis of the activity of the phytopathogen pectin methylesterase. Embo J. 2007 26 3879 3887 2QMH 17878158 structure of V267F mutant HprK/P 2007-07-16 2007-09-18 Chaptal, V.,Vincent, F.,Gueguen-Chaignon, V.,Monedero, V.,Poncet, S.,Deutscher, J.,Nessler, S.,Morera, S. Structural Analysis of the Bacterial HPr Kinase/Phosphorylase V267F Mutant Gives Insights into the Allosteric Regulation Mechanism of This Bifunctional Enzyme. J.Biol.Chem. 2007 282 34952 34957 2V1U 17761880 STRUCTURE OF THE AEROPYRUM PERNIX ORC1 PROTEIN IN COMPLEX WITH DNA 2007-05-30 2007-09-18 Gaudier, M.,Schuwirth, B.S.,Westcott, S.L.,Wigley, D.B. Structural Basis of DNA Replication Origin Recognition by an Orc Protein. Science 2007 317 1213 0 2V7A 17804707 Crystal structure of the T315I Abl mutant in complex with the inhibitor PHA-739358 2007-07-27 2007-09-18 Modugno, M.,Casale, E.,Soncini, C.,Rosettani, P.,Colombo, R.,Lupi, R.,Rusconi, L.,Fancelli, D.,Carpinelli, P.,Cameron, A.D.,Isacchi, A.,Moll, J. Crystal Structure of the T315I Abl Mutant in Complex with the Aurora Kinases Inhibitor Pha-739358. Cancer Res. 2007 67 7987 0 2IZW 17881031 Crystal structure of Ryegrass Mottle Virus 2006-07-27 2007-10-02 Plevka, P.,Tars, K.,Zeltins, A.,Balke, I.,Truve, E.,Liljas, L. The Three-Dimensional Structure of Ryegrass Mottle Virus at 2.9 A Resolution. Virology 2007 369 364 0 2NXX 17673910 Crystal Structure of the Ligand-Binding Domains of the T.castaneum (Coleoptera) Heterodimer EcrUSP Bound to Ponasterone A 2006-11-20 2007-10-02 Iwema, T.,Billas, I.M.,Beck, Y.,Bonneton, F.,Nierengarten, H.,Chaumot, A.,Richards, G.,Laudet, V.,Moras, D. Structural and functional characterization of a novel type of ligand-independent RXR-USP receptor. Embo J. 2007 26 3770 3782 2RCT 18076076 Crystal structure of human holo cellular retinol-binding protein II (CRBP-II) 2007-09-20 2007-10-02 Tarter, M.,Capaldi, S.,Carrizo, M.E.,Ambrosi, E.,Perduca, M.,Monaco, H.L. Crystal structure of human cellular retinol-binding protein II to 1.2 A resolution. Proteins 2007 70 1626 1630 2V74 17882261 Crystal structure of coactivator-associated arginine methyltransferase 1 (CARM1), in complex with S-adenosyl-homocysteine 2007-07-26 2007-10-02 Yue, W.W.,Hassler, M.,Roe, S.M.,Thompson-Vale, V.,Pearl, L.H. Insights Into Histone Code Syntax from Structural and Biochemical Studies of Carm1 Methyltransferase Embo J. 2007 26 4402 0 2IYB 18158903 Structure of complex between the 3rd LIM domain of TES and the EVH1 domain of Mena 2006-07-14 2007-10-16 Boeda, B.,Briggs, D.C.,Higgins, T.,Garvalov, B.K.,Fadden, A.J.,McDonald, N.Q.,Way, M. Tes, a specific Mena interacting partner, breaks the rules for EVH1 binding. Mol. Cell 2007 28 1071 1082 2V61 17915852 Structure of human MAO B in complex with the selective inhibitor 7-(3- chlorobenzyloxy)-4-(methylamino)methyl-coumarin 2007-07-13 2007-10-16 Binda, C.,Wang, J.,Pisani, L.,Caccia, C.,Carotti, A.,Salvati, P.,Edmondson, D.E.,Mattevi, A. Structures of Human Monoamine Oxidase B Complexes with Selective Noncovalent Inhibitors: Safinamide and Coumarin Analogs. J.Med.Chem. 2007 50 5848 0 2VC3 17916187 Ricin A-Chain (Recombinant) E177D Mutant with a bound acetate 2007-09-18 2007-10-16 Allen, S.C.H.,Moore, K.A.H.,Marsden, C.J.,Fulop, V.,Moffat, K.G.,Lord, J.M.,Ladds, G.,Roberts, L.M. The Isolation and Characterisation of Temperature-Dependent Ricin a Chain Molecules in Saccharomyces Cerevisiae FEBS J. 2007 274 5586 0 2VCE 18077347 Characterization and engineering of the bifunctional N- and O- glucosyltransferase involved in xenobiotic metabolism in plants 2007-09-20 2007-10-16 Brazier-Hicks, M.,Offen, W.A.,Gershater, M.C.,Revett, T.J.,Lim, E.K.,Bowles, D.J.,Davies, G.J.,Edwards, R. Characterization and Engineering of the Bifunctional N- and O-Glucosyltransferase Involved in Xenobiotic Metabolism in Plants. Proc.Natl.Acad.Sci.USA 2007 104 20238 0 2HJ4 17636875 Crystal structure of Alcaligenes faecalis AADH complex with p-nitrobenzylamine 2006-06-30 2007-11-06 Hothi, P.,Roujeinikova, A.,Khadra, K.A.,Lee, M.,Cullis, P.,Leys, D.,Scrutton, N.S. Isotope effects reveal that para-substituted benzylamines are poor reactivity probes of the quinoprotein mechanism for aromatic amine dehydrogenase. Biochemistry 2007 46 9250 9259 2HJB 17636875 Crystal structure of Alcaligenes faecalis AADH in complex with p-methoxybenzylamine 2006-06-30 2007-11-06 Hothi, P.,Roujeinikova, A.,Khadra, K.A.,Lee, M.,Cullis, P.,Leys, D.,Scrutton, N.S. Isotope effects reveal that para-substituted benzylamines are poor reactivity probes of the quinoprotein mechanism for aromatic amine dehydrogenase. Biochemistry 2007 46 9250 9259 2JBM 17868694 QPRTASE STRUCTURE FROM HUMAN 2006-12-08 2007-11-13 Liu, H.,Woznica, K.,Catton, G.,Crawford, A.,Bottinf, N.,Naismith, J.H. Structural and Kinetic Characterization of Quinolinate Phosphoribosyltransferase (Hqprtase) from Homo Sapiens. J.Mol.Biol. 2007 373 755 0 3B7K Human Acyl-coenzyme A thioesterase 12 2007-10-31 2007-11-13 Lehtio, L.,Busam, R.D.,Arrowsmith, C.H.,Collins, R.,Dahlgren, L.G.,Edwards, A.M.,Flodin, S.,Flores, A.,Graslund, S.,Hammarstrom, M.,Hallberg, B.M.,Herman, M.D.,Johansson, A.,Johansson, I.,Kallas, A.,Karlberg, T.,Kotenyova, T.,Moche, M.,Nilsson, M.E.,Nordlund, P.,Nyman, T.,Persson, C.,Sagemark, J.,Sundstrom, M.,Svensson, L.,Thorsell, A.G.,Tresaugues, L.,Van Den Berg, S.,Weigelt, J.,Welin, M.,Berglund, H. Human Acyl-coenzyme A thioesterase 12. To be Published 0 0 0 0 2VEP 17967415 Crystal Structure Of The Full Length Bifunctional Enzyme Pria 2007-10-25 2007-11-20 Wright, H.,Noda-Garcia, L.,Ochoa-Leyva, A.,Hodgson, D.A.,Fulop, V.,Barona-Gomez, F. The Structure/Function Relationship of a Dual Substrate (Betaalpha)(8)-Isomerase Biochem.Biophys.Res.Commun. 2008 365 16 0 2V66 17997972 Crystal Structure of the coiled-coil domain of Ndel1 (a.a. 58 to 169) C 2007-07-13 2007-11-27 Derewenda, U.,Tarricone, C.,Choi, W.C.,Cooper, D.R.,Lukasik, S.,Perrina, F.,Tripathy, A.,Kim, M.H.,Cafiso, D.S.,Musacchio, A.,Derewenda, Z.S. The Structure of the Coiled-Coil Domain of Ndel1 and the Basis of its Interaction with Lis1, the Causal Protein of Miller-Dieker Lissencephaly. Structure 2007 15 1467 0 2VG8 18077347 Characterization and engineering of the bifunctional N- and O- glucosyltransferase involved in xenobiotic metabolism in plants 2007-11-09 2007-12-04 Brazier-Hicks, M.,Offen, W.A.,Gershater, M.C.,Revett, T.J.,Lim, E.K.,Bowles, D.J.,Davies, G.J.,Edwards, R. Characterization and Engineering of the Bifunctional N- and O-Glucosyltransferase Involved in Xenobiotic Metabolism in Plants. Proc.Natl.Acad.Sci.USA 2007 104 20238 0 2VGY 18054956 Crystal structure of the Yersinia enterocolitica Type III Secretion Translocator Chaperone SycD (alternative dimer) 2007-11-16 2007-12-04 Buttner, C.R.,Sorg, I.,Cornelis, G.R.,Heinz, D.W.,Niemann, H.H. Structure of the Yersinia Enterocolitica Type III Secretion Chaperone Sycd J.Mol.Biol. 2008 375 997 0 2VGZ 18056996 CRYSTAL STRUCTURE OF HUMAN KYNURENINE AMINOTRANSFERASE II 2007-11-16 2007-12-04 Rossi, F.,Garavaglia, S.,Montalbano, V.,Walsh, M.A.,Rizzi, M. Crystal Structure of Human Kynurenine Aminotransferase II, a Drug Target for the Treatment of Schizophrenia. J.Biol.Chem. 2008 283 3559 0 2VHJ 18057007 P4 PROTEIN FROM BACTERIOPHAGE PHI12 S252A mutant in complex with ADP 2007-11-21 2007-12-04 Kainov, D.E.,Mancini, E.J.,Telenius, J.,Lisal, J.,Grimes, J.M.,Bamford, D.H.,Stuart, D.I.,Tuma, R. Structural Basis of Mechanochemical Coupling in a Hexameric Molecular Motor. J.Biol.Chem. 2008 283 3607 0 2H8V Structure of empty Pheromone Binding Protein ASP1 from the Honeybee Apis mellifera L 2006-06-08 2007-12-11 Pesenti, M.E.,Spinelli, S.,Briand, L.,Pernollet, J.-C.,Cambillau, C.,Tegoni, M. Conformational Changes of the Pheromone Binding Protein ASP1 from the Honeybee Apis mellifera L upon Ligand Binding To be Published 0 0 0 0 2QB6 17599355 Saccharomyces cerevisiae cytosolic exopolyphosphatase, sulfate complex 2007-06-16 2007-12-11 Ugochukwu, E.,Lovering, A.L.,Mather, O.C.,Young, T.W.,White, S.A. The crystal structure of the cytosolic exopolyphosphatase from Saccharomyces cerevisiae reveals the basis for substrate specificity. J.Mol.Biol. 2007 371 1007 1021 2QB7 17599355 Saccharomyces cerevisiae cytosolic exopolyphosphatase, phosphate complex 2007-06-16 2007-12-11 Ugochukwu, E.,Lovering, A.L.,Mather, O.C.,Young, T.W.,White, S.A. The crystal structure of the cytosolic exopolyphosphatase from Saccharomyces cerevisiae reveals the basis for substrate specificity. J.Mol.Biol. 2007 371 1007 1021 2VBF 18084069 The holostructure of the branched-chain keto acid decarboxylase (KdcA) from Lactococcus lactis 2007-09-12 2007-12-18 Berthold, C.L.,Gocke, D.,Wood, M.D.,Leeper, F.,Pohl, M.,Schneider, G. Crystal Structure of the Branched-Chain Keto Acid Decarboxylase (Kdca) from Lactococcus Lactis Provides Insights Into the Structural Basis for the Chemo- and Enantioselective Carboligation Reaction Acta Crystallogr.,Sect.D 2007 63 1217 0 2UYD 18162469 Crystal structure of the SmHasA mutant H83A 2007-04-04 2007-12-25 Caillet-Saguy, C.,Turano, P.,Piccioli, M.,Lukat-Rodgers, G.S.,Czjzek, M.,Guigliarelli, B.,Izadi-Pruneyre, N.,Rodgers, K.R.,Delepierre, M.,Lecroisey, A. Deciphering the Structural Role of Histidine 83 for Heme Binding in Hemophore Hasa. J.Biol.Chem. 2008 283 5960 0 2VGL 12086608 AP2 CLATHRIN ADAPTOR CORE 2007-11-14 2007-12-25 Collins, B.M.,Mccoy, A.J.,Kent, H.M.,Evans, P.R.,Owen, D.J. Molecular Architecture and Functional Model of the Endocytic Ap2 Complex Cell(Cambridge,Mass.) 2002 109 523 0 2VJK 18162462 Formyl-CoA transferase with aspartyl-CoA thioester intermediate derived from oxalyl-CoA 2007-12-11 2007-12-25 Berthold, C.L.,Toyota, C.G.,Richards, N.G.J.,Lindqvist, Y. Reinvestigation of the Catalytic Mechanism of Formyl-Coa Transferase, a Class III Coa-Transferase. J.Biol.Chem. 2008 283 6519 0 2VJL 18162462 Formyl-CoA transferase with aspartyl-CoA thioester intermediate derived from formyl-CoA 2007-12-11 2007-12-25 Berthold, C.L.,Toyota, C.G.,Richards, N.G.J.,Lindqvist, Y. Reinvestigation of the Catalytic Mechanism of Formyl-Coa Transferase, a Class III Coa-Transferase. J.Biol.Chem. 2008 283 6519 0 3B9Q 18022392 The crystal structure of cpFtsY from Arabidopsis thaliana 2007-11-06 2007-12-25 Stengel, K.F.,Holdermann, I.,Wild, K.,Sinning, I. The structure of the chloroplast signal recognition particle (SRP) receptor reveals mechanistic details of SRP GTPase activation and a conserved membrane targeting site Febs Lett. 2007 581 5671 5676 2VA8 18056710 DNA Repair Helicase Hel308 2007-08-30 2008-01-15 Richards, J.D.,Johnson, K.A.,Liu, H.,Mcrobbie, A.M.,Mcmahon, S.,Oke, M.,Carter, L.,Naismith, J.H.,White, M.F. Structure of the DNA Repair Helicase Hel308 Reveals DNA Binding and Autoinhibitory Domains. J.Biol.Chem. 2008 283 5118 0 2VJQ 18245280 Formyl-CoA transferase mutant variant W48Q 2007-12-11 2008-01-15 Toyota, C.G.,Berthold, C.L.,Gruez, A.,Jonsson, S.,Lindqvist, Y.,Cambillau, C.,Richards, N.G.J. Differential Substrate Specificity and Kinetic Behavior of Escherichia Coli Yfdw and Oxalobacter Formigenes Formyl Coenzyme a Transferase. J.Bacteriol. 2008 190 2556 0 2VK5 18218621 THE STRUCTURE OF CLOSTRIDIUM PERFRINGENS NANI SIALIDASE AND ITS CATALYTIC INTERMEDIATES 2007-12-17 2008-01-22 Newstead, S.L.,Potter, J.A.,Wilson, J.C.,Xu, G.,Chien, C.H.,Watts, A.G.,Withers, S.G.,Taylor, G.L. The Structure of Clostridium Perfringens Nani Sialidase and its Catalytic Intermediates. J.Biol.Chem. 2008 283 9080 0 2QNC 17873859 Crystal structure of T4 Endonuclease VII N62D mutant in complex with a DNA Holliday junction 2007-07-18 2008-01-29 Biertumpfel, C.,Yang, W.,Suck, D. Crystal structure of T4 endonuclease VII resolving a Holliday junction. Nature 2007 449 616 620 2VHE 18198901 PglD-CoA complex: An acetyl transferase from Campylobacter jejuni 2007-11-21 2008-01-29 Rangarajan, E.S.,Ruane, K.M.,Sulea, T.,Watson, D.C.,Proteau, A.,Leclerc, S.,Cygler, M.,Matte, A.,Young, N.M. Structure and Active Site Residues of Pgld, an N-Acetyltransferase from the Bacillosamine Synthetic Pathway Required for N-Glycan Synthesis in Campylobacter Jejuni Biochemistry 2008 47 1827 0 3BE8 18093521 Crystal structure of the synaptic protein neuroligin 4 2007-11-16 2008-01-29 Fabrichny, I.P.,Leone, P.,Sulzenbacher, G.,Comoletti, D.,Miller, M.T.,Taylor, P.,Bourne, Y.,Marchot, P. Structural Analysis of the Synaptic Protein Neuroligin and Its beta-Neurexin Complex: Determinants for Folding and Cell Adhesion Neuron 2007 56 979 991 2VM6 18812174 Human Bcl2-A1 in complex with Bim-BH3 peptide 2008-01-23 2008-02-05 Herman, M.D.,Nyman, T.,Welin, M.,Lehtio, L.,Flodin, S.,Tresaugues, L.,Kotenyova, T.,Flores, A.,Nordlund, P. Completing the Family Portrait of the Anti- Apoptotic Bcl-2 Proteins: Crystal Structure of Human Bfl-1 in Complex with Bim. FEBS Lett. 2008 582 3590 0 2PWY 18262540 Crystal Structure of a m1A58 tRNA methyltransferase 2007-05-14 2008-02-26 Barraud, P.,Golinelli-Pimpaneau, B.,Atmanene, C.,Sanglier, S.,Van Dorsselaer, A.,Droogmans, L.,Dardel, F.,Tisne, C. Crystal Structure of Thermus thermophilus tRNA m(1)A(58) Methyltransferase and Biophysical Characterization of Its Interaction with tRNA. J.Mol.Biol. 2008 377 535 550 2VGA 18208323 The structure of Vaccinia virus A41 2007-11-09 2008-02-26 Bahar, M.W.,Kenyon, J.C.,Putz, M.M.,Abrescia, N.G.A.,Pease, J.E.,Wise, E.L.,Stuart, D.I.,Smith, G.L.,Grimes, J.M. Structure and Function of A41, a Vaccinia Virus Chemokine Binding Protein. Plos Pathog. 2008 4 0 0 2VGP 18307303 Crystal structure of Aurora B kinase in complex with a aminothiazole inhibitor 2007-11-15 2008-02-26 Andersen, C.B.,Wan, Y.,Chang, J.W.,Riggs, B.,Lee, C.,Liu, Y.,Sessa, F.,Villa, F.,Kwiatkowski, N.,Suzuki, M.,Nallan, L.,Heald, R.,Musacchio, A.,Gray, N.S. Discovery of Selective Aminothiazole Aurora Kinase Inhibitors Acs Chem.Biol. 2008 3 180 0 2VF4 18295797 E. coli glucosamine-6-P synthase 2007-10-30 2008-03-04 Mouilleron, S.,Badet-Denisot, M.-A.,Golinelli-Pimpaneau, B. Ordering of C-Terminal Loop and Glutaminase Domains of Glucosamine-6-Phosphate Synthase Promotes Sugar Ring Opening and Formation of the Ammonia Channel. J.Mol.Biol. 2008 377 1174 0 2VHV 18304579 Crystal structure of the D270A mutant of L-alanine dehydrogenase from Mycobacterium tuberculosis in complex with NADH. 2007-11-26 2008-03-11 Agren, D.,Stehr, M.,Berthold, C.L.,Kapoor, S.,Oehlmann, W.,Singh, M.,Schneider, G. Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding. J.Mol.Biol. 2008 377 1161 0 2VHW 18304579 Crystal structure of holo L-alanine dehydrogenase from Mycobacterium tuberculosis in the open and closed conformation 2007-11-26 2008-03-11 Agren, D.,Stehr, M.,Berthold, C.L.,Kapoor, S.,Oehlmann, W.,Singh, M.,Schneider, G. Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding. J.Mol.Biol. 2008 377 1161 0 2VHX 18304579 Crystal structure of the ternary complex of L-alanine dehydrogenase from Mycobacterium tuberculosis with NAD+ and pyruvate 2007-11-26 2008-03-11 Agren, D.,Stehr, M.,Berthold, C.L.,Kapoor, S.,Oehlmann, W.,Singh, M.,Schneider, G. Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding. J.Mol.Biol. 2008 377 1161 0 2JIP 18327621 A New Catalytic Mechanism of Periplasmic Nitrate Reductase from Desulfovibrio desulfuricans ATCC 27774 from Crystallographic and EPR Data and based on detailed analysis of the sixth ligand 2007-06-28 2008-03-18 Najmudin, S.,Gonzalez, P.J.,Trincao, J.,Coelho, C.,Mukhopadhyay, A.,Cerqueira, N.M.F.S.A.,Romao, C.C.,Moura, I.,Moura, J.J.G.,Brondino, C.D.,Romao, M.J. Periplasmic Nitrate Reductase Revisited: A Sulfur Atom Completes the Sixth Coordination of the Catalytic Molybdenum. J.Biol.Inorg.Chem. 2008 13 737 0 2JIQ 18327621 A New Catalytic Mechanism of Periplasmic Nitrate Reductase from Desulfovibrio desulfuricans ATCC 27774 from Crystallographic and EPR Data and based on detailed analysis of the sixth ligand 2007-06-28 2008-03-18 Najmudin, S.,Gonzalez, P.J.,Trincao, J.,Coelho, C.,Mukhopadhyay, A.,Cerqueira, N.M.F.S.A.,Romao, C.C.,Moura, I.,Moura, J.J.G.,Brondino, C.D.,Romao, M.J. 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Crystal structure of Drosophila PGRP-SD suggests binding to DAP-type but not lysine-type peptidoglycan Mol.Immunol. 2008 45 2521 2530 2UUO 19007109 Crystal structure of MurD ligase in complex with D-Glu containing sulfonamide inhibitor 2007-03-06 2008-03-25 Humljan, J.,Kotnik, M.,Contreras-Martel, C.,Blanot, D.,Urleb, U.,Dessen, A.,Solmajer, T.,Gobec, S. Novel naphthalene-N-sulfonyl-D-glutamic acid derivatives as inhibitors of MurD, a key peptidoglycan biosynthesis enzyme. J. Med. Chem. 2008 51 7486 7494 2HKM Crystal structure of the Schiff base intermediate in the reductive half-reaction of aromatic amine dehydrogenase (AADH) with phenylethylamine. 2006-07-05 2008-04-01 Hothi, P.,Roujeinikova, A.,Sutcliffe, M.J.,Cullis, P.,Leys, D.,Scrutton, N.S. Structure-reactivity correlations and kinetic isotope effects in aromatic amine dehydrogenase To be Published 0 0 0 0 2HKR Structures of the carbinolamine and schiff-base intermediates in the reductive half-reaction of aromatic amine dehydrogenase (AADH) with p-methoxyphenylethylamine 2006-07-05 2008-04-01 Hothi, P.,Roujeinikova, A.,Sutcliffe, M.J.,Cullis, P.,Leys, D.,Scrutton, N.S. Structure-reactivity correlations and kinetic isotope effects in aromatic amine dehydrogenase To be Published 0 0 0 0 2VO5 18408714 Structural and biochemical evidence for a boat-like transition state in beta-mannosidases 2008-02-08 2008-04-01 Tailford, L.E.,Offen, W.A.,Smith, N.L.,Dumon, C.,Morland, C.,Gratien, J.,Heck, M.P.,Stick, R.V.,Bleriot, Y.,Vasella, A.,Gilbert, H.J.,Davies, G.J. Structural and Biochemical Evidence for a Boat-Like Transition State in Beta-Mannosidases. Nat.Chem.Biol. 2008 4 306 0 2JJ7 19334535 Crystal structure of the HlyIIR mutant protein with residues 170-185 substituted by alanine 2008-03-18 2008-04-08 Kovalevskii, O.V.,Antson, A.A.,Solonin, A.S. [Contraction of the disordered loop located within C-terminal domain of the transcriptional regulator HlyIIR causes its structural rearrangement]. Mol.Biol.(Moscow) 2009 43 126 135 2PR8 18292754 crystal structure of aminoglycoside N-acetyltransferase AAC(6')-Ib11 2007-05-04 2008-04-08 Maurice, F.,Broutin, I.,Podglajen, I.,Benas, P.,Collatz, E.,Dardel, F. Enzyme structural plasticity and the emergence of broad-spectrum antibiotic resistance. Embo Rep. 2008 9 344 349 2QIR 18292754 Crystal structure of aminoglycoside acetyltransferase AAC(6')-Ib in complex whith coenzyme A and kanamycin 2007-07-05 2008-04-08 Maurice, F.,Broutin, I.,Podglajen, I.,Benas, P.,Collatz, E.,Dardel, F. Enzyme structural plasticity and the emergence of broad-spectrum antibiotic resistance. Embo Rep. 2008 9 344 349 3CIW 18400755 X-RAY structure of the [FeFe]-hydrogenase maturase HydE from thermotoga maritima 2008-03-12 2008-04-08 Nicolet, Y.,Rubach, J.K.,Posewitz, M.C.,Amara, P.,Mathevon, C.,Atta, M.,Fontecave, M.,Fontecilla-Camps, J.C. X-ray Structure of the [FeFe]-Hydrogenase Maturase HydE from Thermotoga maritima J.Biol.Chem. 2008 283 18861 18872 3CIX 18400755 X-RAY structure of the [FeFe]-hydrogenase maturase HydE from thermotoga maritima in complex with thiocyanate 2008-03-12 2008-04-08 Nicolet, Y.,Rubach, J.K.,Posewitz, M.C.,Amara, P.,Mathevon, C.,Atta, M.,Fontecave, M.,Fontecilla-Camps, J.C. X-ray Structure of the [FeFe]-Hydrogenase Maturase HydE from Thermotoga maritima J.Biol.Chem. 2008 283 18861 18872 3CLR 18407658 Crystal structure of the R236A ETF mutant from M. methylotrophus 2008-03-20 2008-04-08 Burgess, S.G.,Messiha, H.L.,Katona, G.,Rigby, S.E.,Leys, D.,Scrutton, N.S. Probing the dynamic interface between trimethylamine dehydrogenase (TMADH) and electron transferring flavoprotein (ETF) in the TMADH-2ETF complex: role of the Arg-alpha237 (ETF) and Tyr-442 (TMADH) residue pair. Biochemistry 2008 47 5168 5181 3CLS 18407658 Crystal structure of the R236C mutant of ETF from Methylophilus methylotrophus 2008-03-20 2008-04-08 Burgess, S.G.,Messiha, H.L.,Katona, G.,Rigby, S.E.,Leys, D.,Scrutton, N.S. Probing the dynamic interface between trimethylamine dehydrogenase (TMADH) and electron transferring flavoprotein (ETF) in the TMADH-2ETF complex: role of the Arg-alpha237 (ETF) and Tyr-442 (TMADH) residue pair. Biochemistry 2008 47 5168 5181 3CLT 18407658 Crystal structure of the R236E mutant of Methylophilus methylotrophus ETF 2008-03-20 2008-04-08 Burgess, S.G.,Messiha, H.L.,Katona, G.,Rigby, S.E.,Leys, D.,Scrutton, N.S. Probing the dynamic interface between trimethylamine dehydrogenase (TMADH) and electron transferring flavoprotein (ETF) in the TMADH-2ETF complex: role of the Arg-alpha237 (ETF) and Tyr-442 (TMADH) residue pair. Biochemistry 2008 47 5168 5181 3CLU 18407658 Crystal structure of the R236K mutant from Methylophilus methylotrophus ETF 2008-03-20 2008-04-08 Burgess, S.G.,Messiha, H.L.,Katona, G.,Rigby, S.E.,Leys, D.,Scrutton, N.S. Probing the dynamic interface between trimethylamine dehydrogenase (TMADH) and electron transferring flavoprotein (ETF) in the TMADH-2ETF complex: role of the Arg-alpha237 (ETF) and Tyr-442 (TMADH) residue pair. Biochemistry 2008 47 5168 5181 2VC7 18486146 Structural basis for natural lactonase and promiscuous phosphotriesterase activities 2007-09-19 2008-04-15 Elias, M.,Dupuy, J.,Merone, L.,Mandrich, L.,Porzio, E.,Moniot, S.,Rochu, D.,Lecomte, C.,Rossi, M.,Masson, P.,Manco, G.,Chabriere, E. Structural Basis for Natural Lactonase and Promiscuous Phosphotriesterase Activities. J.Mol.Biol. 2008 379 1017 0 2VQB 18443301 Bacterial flavin-containing monooxygenase in complex with NADP: soaking in aerated solution 2008-03-12 2008-04-22 Alfieri, A.,Malito, E.,Orru, R.,Fraaije, M.W.,Mattevi, A. Revealing the Moonlighting Role of Nadp in the Structure of a Flavin-Containing Monooxygenase. Proc.Natl.Acad.Sci.USA 2008 105 6572 0 2VRL 18426226 Structure of human MAO B in complex with benzylhydrazine 2008-04-09 2008-04-22 Binda, C.,Wang, J.,Li, M.,Hubalek, F.,Mattevi, A.,Edmondson, D.E. Structural and Mechanistic Studies of Arylalkylhydrazine Inhibition of Human Monoamine Oxidases a and B Biochemistry 2008 47 5616 0 2VRM 18426226 Structure of human MAO B in complex with phenyethylhydrazine 2008-04-09 2008-04-22 Binda, C.,Wang, J.,Li, M.,Hubalek, F.,Mattevi, A.,Edmondson, D.E. 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FEBS J. 2008 275 2151 0 2VOO 18547518 Crystal structure of N-terminal domains of Human La protein complexed with RNA oligomer UUUUUUUU 2008-02-19 2008-05-06 Kotik-Kogan, O.,Valentine, E.R.,Sanfelice, D.,Conte, M.R.,Curry, S. Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3' Ends by the Human La Protein. Structure 2008 16 852 0 2VQZ 18454157 Structure of the cap-binding domain of influenza virus polymerase subunit PB2 with bound m7GTP 2008-03-21 2008-05-13 Guilligay, D.,Tarendeau, F.,Resa-Infante, P.,Coloma, R.,Crepin, T.,Sehr, P.,Lewis, J.,Ruigrok, R.W.H.,Ortin, J.,Hart, D.J.,Cusack, S. The Structural Basis for CAP Binding by Influenza Virus Polymerase Subunit Pb2. Nat.Struct.Mol.Biol. 2008 15 500 0 3CXH 18390544 Structure of yeast complex III with isoform-2 cytochrome c bound and definition of a minimal core interface for electron transfer. 2008-04-24 2008-05-13 Solmaz, S.R.,Hunte, C. 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Logical identification of an allantoinase analog (puuE) recruited from polysaccharide deacetylases J.Biol.Chem. 2008 283 23295 23304 3CL8 18550550 Crystal structure of Puue Allantoinase complexed with ACA 2008-03-18 2008-06-10 Ramazzina, I.,Cendron, L.,Folli, C.,Berni, R.,Monteverdi, D.,Zanotti, G.,Percudani, R. Logical identification of an allantoinase analog (puuE) recruited from polysaccharide deacetylases J.Biol.Chem. 2008 283 23295 23304 2VPB 18498752 Decoding of methylated histone H3 tail by the Pygo-BCL9 Wnt signaling complex 2008-02-27 2008-06-17 Fiedler, M.,Sanchez-Barrena, M.J.,Nekrasov, M.,Mieszczanek, J.,Rybin, V.,Muller, J.,Evans, P.,Bienz, M. Decoding of Methylated Histone H3 Tail by the Pygo- Bcl9 Wnt Signaling Complex. Mol.Cell 2008 30 507 0 2VPG 18498752 Decoding of methylated histone H3 tail by the Pygo-BCL9 Wnt signaling complex 2008-02-27 2008-06-17 Fiedler, M.,Sanchez-Barrena, M.J.,Nekrasov, M.,Mieszczanek, J.,Rybin, V.,Muller, J.,Evans, P.,Bienz, M. Decoding of Methylated Histone H3 Tail by the Pygo- Bcl9 Wnt Signaling Complex. Mol.Cell 2008 30 507 0 2VW0 18835278 Crystal structure of the NanB sialidase from Streptococcus pneumoniae 2008-06-13 2008-06-24 Xu, G.,Potter, J.A.,Russell, R.J.M.,Oggioni, M.R.,Andrew, P.W.,Taylor, G.L. Crystal Structure of the Nanb Sialidase from Streptococcus Pneumoniae J.Mol.Biol. 2008 384 436 0 2Q9X Crystal structure of highly stable mutant Q40P/S47I/H93G of human fibroblast growth factor-1 2007-06-14 2008-07-01 Szlachcic, A.,Zakrzewska, M.,Krowarsch, D.,Os, V.,Helland, R.,Otlewski, J. Crystal structure of highly stable mutant Q40P/S47I/H93G of human fibroblast growth factor-1 To be Published 0 0 0 0 2QDO 18718907 NblA protein from T. vulcanus 2007-06-21 2008-07-01 Dines, M.,Sendersky, E.,David, L.,Schwarz, R.,Adir, N. Structural, Functional, and Mutational Analysis of the NblA Protein Provides Insight into Possible Modes of Interaction with the Phycobilisome J.Biol.Chem. 2008 283 30330 30340 2QPM 20478354 Leu492Ala mutant of Maize cytokinin oxidase/dehydrogenase complexed with benzylurea inhibitor CPBU 2007-07-24 2008-07-01 Kopecny, D.,Briozzo, P.,Popelkova, H.,Sebela, M.,Koncitikova, R.,Spichal, L.,Nisler, J.,Madzak, C.,Frebort, I.,Laloue, M.,Houba-Herin, N. Phenyl- and benzylurea cytokinins as competitive inhibitors of cytokinin oxidase/dehydrogenase: a structural study. Biochimie 2010 92 1052 1062 2R14 17939663 Structure of morphinone reductase in complex with tetrahydroNAD 2007-08-22 2008-07-01 Pudney, C.R.,Hay, S.,Pang, J.,Costello, C.,Leys, D.,Sutcliffe, M.J.,Scrutton, N.S. Mutagenesis of morphinone reductase induces multiple reactive configurations and identifies potential ambiguity in kinetic analysis of enzyme tunneling mechanisms. J.Am.Chem.Soc. 2007 129 13949 13956 2V36 Crystal structure of gamma-glutamyl transferase from Bacillus subtilis 2007-06-13 2008-07-01 Sharath, B.,Prabhune, A.A.,Suresh, C.G.,Wilkinson, A.J.,Brannigan, J.A. Crystal Structure of Gamma-Glutamyl Transferase To be Published 0 0 0 0 2VMC 18384150 Structure of the complex of discoidin II from Dictyostelium discoideum with N-acetyl-galactosamine 2008-01-25 2008-07-01 Aragao, K.S.,Satre, M.,Imberty, A.,Varrot, A. Structure Determination of Discoidin II from Dictyostelium Discoideum and Carbohydrate Binding Properties of the Lectin Domain. Proteins 2008 73 43 0 2VRX 18559266 Structure of Aurora B kinase in complex with ZM447439 2008-04-16 2008-07-01 Girdler, F.,Sessa, F.,Patercoli, S.,Villa, F.,Musacchio, A.,Taylor, S.S. Molecular Basis of Drug Resistance in Aurora Kinases. Chem.Biol. 2008 15 552 0 3C5S 18621718 Crystal Structure of monoclonal Fab F22-4 specific for Shigella flexneri 2a O-Ag 2008-02-01 2008-07-01 Vulliez-Le Normand, B.,Saul, F.A.,Phalipon, A.,Belot, F.,Guerreiro, C.,Mulard, L.A.,Bentley, G.A. Structures of synthetic O-antigen fragments from serotype 2a Shigella flexneri in complex with a protective monoclonal antibody Proc.Natl.Acad.Sci.Usa 2008 105 9976 9981 3DEM 18596036 CUB1-EGF-CUB2 domain of HUMAN MASP-1/3 2008-06-10 2008-07-01 Teillet, F.,Gaboriaud, C.,Lacroix, M.,Martin, L.,Arlaud, G.J.,Thielens, N.M. Crystal structure of the CUB1-EGF-CUB2 domain of human MASP-1/3 and identification of its interaction sites with mannan-binding lectin and ficolins J.Biol.Chem. 2008 283 25715 25724 2VQJ 18614528 Structure of HDAC4 catalytic domain bound to a trifluoromethylketone inhbitor 2008-03-17 2008-07-08 Bottomley, M.J.,Lo Surdo, P.,Di Giovine, P.,Cirillo, A.,Scarpelli, R.,Ferrigno, F.,Jones, P.,Neddermann, P.,De Francesco, R.,Steinkuhler, C.,Gallinari, P.,Carfi, A. Structural and Functional Analysis of the Human Hdac4 Catalytic Domain Reveals a Regulatory Zinc-Binding Domain. J.Biol.Chem. 2008 283 26694 0 2VQM 18614528 Structure of HDAC4 catalytic domain bound to a hydroxamic acid inhbitor 2008-03-17 2008-07-08 Bottomley, M.J.,Lo Surdo, P.,Di Giovine, P.,Cirillo, A.,Scarpelli, R.,Ferrigno, F.,Jones, P.,Neddermann, P.,De Francesco, R.,Steinkuhler, C.,Gallinari, P.,Carfi, A. Structural and Functional Analysis of the Human Hdac4 Catalytic Domain Reveals a Regulatory Zinc-Binding Domain. J.Biol.Chem. 2008 283 26694 0 2VQO 18614528 Structure of HDAC4 catalytic domain with a gain-of-function muation bound to a trifluoromethylketone inhbitor 2008-03-18 2008-07-08 Bottomley, M.J.,Lo Surdo, P.,Di Giovine, P.,Cirillo, A.,Scarpelli, R.,Ferrigno, F.,Jones, P.,Neddermann, P.,De Francesco, R.,Steinkuhler, C.,Gallinari, P.,Carfi, A. Structural and Functional Analysis of the Human Hdac4 Catalytic Domain Reveals a Regulatory Zinc-Binding Domain. J.Biol.Chem. 2008 283 26694 0 2VQQ 18614528 Structure of HDAC4 catalytic domain (a double cysteine-to-alanine mutant) bound to a trifluoromethylketone inhbitor 2008-03-18 2008-07-08 Bottomley, M.J.,Lo Surdo, P.,Di Giovine, P.,Cirillo, A.,Scarpelli, R.,Ferrigno, F.,Jones, P.,Neddermann, P.,De Francesco, R.,Steinkuhler, C.,Gallinari, P.,Carfi, A. Structural and Functional Analysis of the Human Hdac4 Catalytic Domain Reveals a Regulatory Zinc-Binding Domain. J.Biol.Chem. 2008 283 26694 0 3C0P 18571199 Maize cytokinin oxidase/dehydrogenase complexed with the allenic cytokinin analog HA-8 2008-01-21 2008-07-15 Kopecny, D.,Sebela, M.,Briozzo, P.,Spichal, L.,Houba-Herin, N.,Masek, V.,Joly, N.,Madzak, C.,Anzenbacher, P.,Laloue, M. Mechanism-based inhibitors of cytokinin oxidase/dehydrogenase attack FAD cofactor J.Mol.Biol. 2008 380 886 899 2Q8V 18718907 NblA protein from T. vulcanus crystallized with urea 2007-06-12 2008-07-22 Dines, M.,Sendersky, E.,David, L.,Schwarz, R.,Adir, N. Structural, Functional, and Mutational Analysis of the NblA Protein Provides Insight into Possible Modes of Interaction with the Phycobilisome J.Biol.Chem. 2008 283 30330 30340 2VWK 18614176 Uracil Recognition in Archaeal DNA Polymerases Captured by X-ray Crystallography. V93Q polymerase variant 2008-06-26 2008-07-22 Firbank, S.J.,Wardle, J.,Heslop, P.,Lewis, R.J.,Connolly, B.A. Uracil Recognition in Archaeal DNA Polymerases Captured by X-Ray Crystallography. J.Mol.Biol. 2008 381 529 0 3DDQ 18574471 Structure of phosphorylated Thr160 CDK2/cyclin A in complex with the inhibitor roscovitine 2008-06-06 2008-07-22 Bettayeb, K.,Oumata, N.,Echalier, A.,Ferandin, Y.,Endicott, J.A.,Galons, H.,Meijer, L. CR8, a potent and selective, roscovitine-derived inhibitor of cyclin-dependent kinases. Oncogene 2008 27 5797 5807 2VJ2 18660822 Human Jagged-1, domains DSL and EGFs1-3 2007-12-06 2008-07-29 Cordle, J.,Johnson, S.,Tay, J.Z.,Roversi, P.,Wilkin, M.B.,De Madrid, B.H.,Shimizu, H.,Jensen, S.,Whiteman, P.,Jin, B.,Redfield, C.,Baron, M.,Lea, S.M.,Handford, P.A. A Conserved Face of the Jagged/Serrate Dsl Domain is Involved in Notch Trans-Activation and Cis-Inhibition. Nat.Struct.Mol.Biol. 2008 15 849 0 2VUT 18602114 Crystal structure of NAD-bound NmrA-AreA zinc finger complex 2008-05-30 2008-07-29 Kotaka, M.,Johnson, C.,Lamb, H.K.,Hawkins, A.R.,Ren, J.,Stammers, D.K. Structural Analysis of the Recognition of the Negative Regulator Nmra and DNA by the Zinc Finger from the Gata-Type Transcription Factor Area. J.Mol.Biol. 2008 381 373 0 2RKY 18713862 Crystal structure of the fourth and fifth fibronectin F1 modules in complex with a fragment of staphylococcus aureus fnbpa-1 2007-10-18 2008-08-05 Bingham, R.J.,Meenan, N.A.,Schwarz-Linek, U.,Turkenburg, J.P.,Garman, E.F.,Potts, J.R. Crystal structures of fibronectin-binding sites from Staphylococcus aureus FnBPA in complex with fibronectin domains Proc.Natl.Acad.Sci.Usa 2008 105 12254 12258 2VUV 18687680 Crystal structure of Codakine at 1.3A resolution 2008-05-30 2008-08-05 Gourdine, J.P.,Cioci, G.C.,Miguet, L.,Unverzagt, C.,Silva, D.V.,Varrot, A.,Gautier, C.,Smith-Ravin, E.J.,Imberty, A. High Affinity Interaction between a Bivalve C-Type Lectin and a Biantennary Complex-Type N-Glycan Revealed by Crystallography and Microcalorimetry. J.Biol.Chem. 2008 283 30112 0 3D1K 18642904 R/T intermediate quaternary structure of an antarctic fish hemoglobin in an alpha(CO)-beta(pentacoordinate) state 2008-05-06 2008-08-05 Vitagliano, L.,Vergara, A.,Bonomi, G.,Merlino, A.,Verde, C.,di Prisco, G.,Howes, B.D.,Smulevich, G.,Mazzarella, L. Spectroscopic and crystallographic characterization of a tetrameric hemoglobin oxidation reveals structural features of the functional intermediate relaxed/tense state. J.Am.Chem.Soc. 2008 130 10527 10535 3D32 18638487 Complex of GABA(A) receptor-associated protein (GABARAP) with a synthetic peptide 2008-05-09 2008-08-05 Weiergraber, O.H.,Stangler, T.,Thielmann, Y.,Mohrluder, J.,Wiesehan, K.,Willbold, D. Ligand Binding Mode of GABA(A) Receptor-Associated Protein. J.Mol.Biol. 2008 381 1320 1331 2VYI 18759457 Crystal Structure of the TPR domain of Human SGT 2008-07-24 2008-08-12 Dutta, S.,Tan, Y.J. Structural and Functional Characterization of Human Sgt and its Interaction with Vpu of the Human Immunodeficiency Virus Type 1. Biochemistry 2008 47 10123 0 2VYW 18621914 Hemoglobin (Hb2) from trematode Fasciola hepatica 2008-07-29 2008-08-12 Dewilde, S.,Ioanitescu, A.I.,Kiger, L.,Gilany, K.,Marden, M.C.,Van Doorslaer, S.,Vercruysse, J.,Pesce, A.,Nardini, M.,Bolognesi, M.,Moens, L. The Hemoglobins of the Trematodes Fasciola Hepatica and Paramphistomum Epiclitum: A Molecular Biological, Physico-Chemical, Kinetic, and Vaccination Study. Protein Sci. 2008 17 1653 0 2VLE 18613661 The structure of daidzin, a naturally occurring anti alcohol- addiction agent, in complex with human mitochondrial aldehyde dehydrogenase 2008-01-13 2008-08-19 Lowe, E.D.,Gao, G.Y.,Johnson, L.N.,Keung, W.M. Structure of Daidzin, a Naturally Occurring Anti-Alcohol-Addiction Agent, in Complex with Human Mitochondrial Aldehyde Dehydrogenase. J.Med.Chem. 2008 51 4482 0 2Z71 Structure of truncated mutant CYS1GLY of penicillin V acylase from bacillus sphaericus co-crystallized with penicillin V 2007-08-10 2008-08-26 Pathak, M.C.,Brannigan, J.,Dodson, G.G.,Suresh, C.G. Studies on the catalysis and post translational processing of penicillin V acylase To be published 0 0 0 0 3BSG 18588886 Barley alpha-amylase isozyme 1 (AMY1) H395A mutant 2007-12-24 2008-08-26 Nielsen, M.M.,Seo, E.S.,Bozonnet, S.,Aghajari, N.,Robert, X.,Haser, R.,Svensson, B. Multi-site substrate binding and interplay in barley alpha-amylase 1 Febs Lett. 2008 582 2567 2571 3BSH 18588886 Barley alpha-amylase isozyme 1 (AMY1) double mutant Y105A/Y380A in complex with inhibitor acarbose 2007-12-24 2008-08-26 Nielsen, M.M.,Seo, E.S.,Bozonnet, S.,Aghajari, N.,Robert, X.,Haser, R.,Svensson, B. Multi-site substrate binding and interplay in barley alpha-amylase 1 Febs Lett. 2008 582 2567 2571 2RKN 18552128 X-ray structure of the self-defense and signaling protein DIR1 from Arabidopsis taliana 2007-10-17 2008-09-02 Lascombe, M.B.,Bakan, B.,Buhot, N.,Marion, D.,Blein, J.P.,Larue, V.,Lamb, C.,Prange, T. The structure of ""defective in induced resistance"" protein of Arabidopsis thaliana, DIR1, reveals a new type of lipid transfer protein. Protein Sci. 2008 17 1522 1530 3CS5 18718907 NblA protein from Synechococcus elongatus PCC 7942 2008-04-09 2008-09-09 Dines, M.,Sendersky, E.,David, L.,Schwarz, R.,Adir, N. Structural, Functional, and Mutational Analysis of the NblA Protein Provides Insight into Possible Modes of Interaction with the Phycobilisome J.Biol.Chem. 2008 283 30330 30340 3DWC 18793339 Trypanosoma Cruzi Metallocarboxypeptidase 1 2008-07-22 2008-09-09 Niemirowicz, G.,Fernandez, D.,Sola, M.,Cazzulo, J.J.,Aviles, F.X.,Gomis-Ruth, F.X. The molecular analysis of Trypanosoma cruzi metallocarboxypeptidase 1 provides insight into fold and substrate specificity Mol.Microbiol. 2008 70 853 866 2VX4 18799462 CELLVIBRIO JAPONICUS MANNANASE CJMAN26C NATIVE FORM 2008-07-01 2008-09-16 Cartmell, A.,Topakas, E.,Ducros, V.M.-A.,Suits, M.D.L.,Davies, G.J.,Gilbert, H.J. The Cellvibrio Japonicus Mannanase Cjman26C Displays a Unique Exo-Mode of Action that is Conferred by Subtle Changes to the Distal Region of the Active Site. J.Biol.Chem. 2008 283 34403 0 2VX7 18799462 CELLVIBRIO JAPONICUS MANNANASE CJMAN26C MANNOBIOSE-BOUND FORM 2008-07-01 2008-09-16 Cartmell, A.,Topakas, E.,Ducros, V.M.-A.,Suits, M.D.L.,Davies, G.J.,Gilbert, H.J. The Cellvibrio Japonicus Mannanase Cjman26C Displays a Unique Exo-Mode of Action that is Conferred by Subtle Changes to the Distal Region of the Active Site. J.Biol.Chem. 2008 283 34403 0 2VXJ 18762193 CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH AGAL13BGAL14GLC AT 1.9 A RESOLUTION 2008-07-04 2008-09-16 Blanchard, B.,Nurisso, A.,Hollville, E.,Tetaud, C.,Wiels, J.,Pokorna, M.,Wimmerova, M.,Varrot, A.,Imberty, A. Structural Basis of the Preferential Binding for Globo-Series Glycosphingolipids Displayed by Pseudomonas Aeruginosa Lectin I. J.Mol.Biol. 2008 383 837 0 2VAT 18279889 Crystal structure of deacetylcephalosporin C acetyltransferase in complex with coenzyme A 2007-09-04 2008-09-23 Lejon, S.,Ellis, J.,Valegard, K. The Last Step in Cephalosporin C Formation Revealed: Crystal Structures of Deacetylcephalosporin C Acetyltransferase from Acremonium Chrysogenum in Complexes with Reaction Intermediates. J.Mol.Biol. 2008 377 935 0 2VF9 18786545 Crystal structure of bacteriophage PRR1 2007-11-01 2008-09-23 Persson, M.,Tars, K.,Liljas, L. The Capsid of the Small RNA Phage Prr1 is Stabilized by Metal Ions J.Mol.Biol. 2008 383 914 0 2VY1 18784751 Structure of LEAFY transcription factor from Arabidopsis thaliana in complex with DNA from AP1 promoter 2008-07-16 2008-09-23 Hames, C.,Ptchelkine, D.,Grimm, C.,Thevenon, E.,Moyroud, E.,Gerard, F.,Martiel, J.L.,Benlloch, R.,Parcy, F.,Muller, C.W. Structural Basis for Leafy Floral Switch Function and Similarity with Helix-Turn-Helix Proteins. Embo J. 2008 27 2628 0 2W0C 18775333 X-ray structure of the entire lipid-containing bacteriophage PM2 2008-08-13 2008-09-23 Abrescia, N.G.A.,Grimes, J.M.,Kivela, H.M.,Assenberg, R.,Sutton, G.C.,Butcher, S.J.,Bamford, J.K.H.,Bamford, D.H.,Stuart, D.I. Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2 Mol.Cell 2008 31 749 0 3CCO 18619463 Structural adaptation and conservation in quadruplex-drug recognition 2008-02-26 2008-09-23 Parkinson, G.N.,Cuenca, F.,Neidle, S. Topology conservation and loop flexibility in quadruplex-drug recognition: crystal structures of inter- and intramolecular telomeric DNA quadruplex-drug complexes J.Mol.Biol. 2008 381 1145 1156 3CDM 18619463 Structural adaptation and conservation in quadruplex-drug recognition 2008-02-27 2008-09-23 Parkinson, G.N.,Cuenca, F.,Neidle, S. Topology conservation and loop flexibility in quadruplex-drug recognition: crystal structures of inter- and intramolecular telomeric DNA quadruplex-drug complexes J.Mol.Biol. 2008 381 1145 1156 3CXV 18818197 Crystal structure of the Cytochrome P450 CYP121 A233G mutant from Mycobacterium tuberculosis 2008-04-25 2008-09-23 McLean, K.J.,Carroll, P.,Lewis, D.G.,Dunford, A.J.,Seward, H.E.,Neeli, R.,Cheesman, M.R.,Marsollier, L.,Douglas, P.,Smith, W.E.,Rosenkrands, I.,Cole, S.T.,Leys, D.,Parish, T.,Munro, A.W. Characterization of active site structure in CYP121. A cytochrome P450 essential for viability of Mycobacterium tuberculosis H37Rv. J.Biol.Chem. 2008 283 33406 33416 3CXX Crystal structure of cytochrome P450 CYP121 F338H from M. tuberculosis 2008-04-25 2008-09-23 McLean, K.J.,Carrol, P.,Lewis, D.G.,Dunford, A.J.,Seward, H.E.,Neeli, R.,Cole, S.T.,Leys, D.,Parish, T.,Munro, A.W. Characterization of the active site structure of CY121 TO BE PUBLISHED 0 0 0 0 3E6B 18717788 OCPA complexed CprK (C200S) 2008-08-15 2008-09-30 Levy, C.,Pike, K.,Heyes, D.J.,Joyce, M.G.,Gabor, K.,Smidt, H.,van der Oost, J.,Leys, D. Molecular basis of halorespiration control by CprK, a CRP-FNR type transcriptional regulator Mol.Microbiol. 2008 70 151 167 2VYY 18840607 Mutant Ala55Trp of Cerebratuls lacteus mini-hemoglobin 2008-07-29 2008-10-07 Salter, M.D.,Nienhaus, K.,Nienhaus, G.U.,Dewilde, S.,Moens, L.,Pesce, A.,Nardini, M.,Bolognesi, M.,Olson, J.S. The Apolar Channel in Cerebratulus Lacteus Hemoglobin is the Route for O2 Entry and Exit. J.Biol.Chem. 2008 283 35689 0 2VYZ 18840607 Mutant Ala55Phe of Cerebratulus lacteus mini-hemoglobin 2008-07-29 2008-10-07 Salter, M.D.,Nienhaus, K.,Nienhaus, G.U.,Dewilde, S.,Moens, L.,Pesce, A.,Nardini, M.,Bolognesi, M.,Olson, J.S. The Apolar Channel in Cerebratulus Lacteus Hemoglobin is the Route for O2 Entry and Exit. J.Biol.Chem. 2008 283 35689 0 2V54 18971333 Crystal structure of vaccinia virus thymidylate kinase bound to TDP 2008-10-01 2008-10-21 Caillat, C.,Topalis, D.,Agrofoglio, L.A.,Pochet, S.,Balzarini, J.,Deville-Bonne, D.,Meyer, P. Crystal Structure of Poxvirus Thymidylate Kinase: An Unexpected Dimerization Has Implications for Antiviral Therapy Proc.Natl.Acad.Sci.USA 2008 105 16900 0 2VCV 20083122 Glutathione transferase A3-3 in complex with glutathione and delta-4- androstene-3-17-dione 2007-09-27 2008-10-28 Tars, K.,Olin, B.,Mannervik, B. Structural Basis for Featuring of Steroid Isomerase Activity in Alpha Class Glutathione Transferases. J.Mol.Biol. 2010 397 332 0 2VGO 18483302 Crystal structure of Aurora B kinase in complex with Reversine inhibitor 2007-11-15 2008-10-28 D'Alise, A.M.,Amabile, G.,Iovino, M.,Di Giorgio, F.P.,Bartiromo, M.,Sessa, F.,Villa, F.,Musacchio, A.,Cortese, R. Reversine, a Novel Aurora Kinases Inhibitor, Inhibits Colony Formation of Human Acute Myeloid Leukemia Cells. Mol.Cancer Ther. 2008 7 1140 0 3CHM 18854373 Crystal structure of PCI domain from A. thaliana COP9 signalosome subunit 7 (CSN7) 2008-03-10 2008-10-28 Dessau, M.,Halimi, Y.,Erez, T.,Chomsky-Hecht, O.,Chamovitz, D.A.,Hirsch, J.A. The Arabidopsis COP9 signalosome subunit 7 is a model PCI domain protein with subdomains involved in COP9 signalosome assembly Plant Cell 2008 20 2815 2834 3CM2 18851976 Crystal Structure of XIAP BIR3 domain in complex with a Smac-mimetic compound, Smac010 2008-03-20 2008-10-28 Mastrangelo, E.,Cossu, F.,Milani, M.,Sorrentino, G.,Lecis, D.,Delia, D.,Manzoni, L.,Drago, C.,Seneci, P.,Scolastico, C.,Rizzo, V.,Bolognesi, M. Targeting the X-linked inhibitor of apoptosis protein through 4-substituted azabicyclo[5.3.0]alkane smac mimetics. Structure, activity, and recognition principles. J.Mol.Biol. 2008 384 673 689 3CP5 18855424 Cytochrome c from rhodothermus marinus 2008-03-31 2008-10-28 Stelter, M.,Melo, A.M.,Pereira, M.M.,Gomes, C.M.,Hreggvidsson, G.O.,Hjorleifsdottir, S.,Saraiva, L.M.,Teixeira, M.,Archer, M. A novel type of monoheme cytochrome c: biochemical and structural characterization at 1.23 A resolution of rhodothermus marinus cytochrome c Biochemistry 2008 47 11953 11963 3EMO 18948113 Crystal structure of transmembrane Hia 973-1098 2008-09-24 2008-11-04 Meng, G.,St Geme, J.W.,Waksman, G. Repetitive Architecture of the Haemophilus influenzae Hia Trimeric Autotransporter J.Mol.Biol. 2008 384 824 836 3DBJ 18823993 Allophycocyanin from Thermosynechococcus vulcanus 2008-06-01 2008-11-11 McGregor, A.,Klartag, M.,David, L.,Adir, N. Allophycocyanin Trimer Stability and Functionality Are Primarily Due to Polar Enhanced Hydrophobicity of the Phycocyanobilin Binding Pocket J.Mol.Biol. 2008 384 406 421 2RH8 19690377 Structure of apo anthocyanidin reductase from vitis vinifera 2007-10-08 2008-11-18 Gargouri, M.,Manigand, C.,Mauge, C.,Granier, T.,Langlois d'Estaintot, B.,Cala, O.,Pianet, I.,Bathany, K.,Chaudiere, J.,Gallois, B. Structure and epimerase activity of anthocyanidin reductase from Vitis vinifera. Acta Crystallogr.,Sect.D 2009 65 989 1000 3CWZ 19141279 Structure of RAB6(GTP)-R6IP1 complex 2008-04-23 2008-11-18 Recacha, R.,Boulet, A.,Jollivet, F.,Monier, S.,Houdusse, A.,Goud, B.,Khan, A.R. Structural basis for recruitment of Rab6-interacting protein 1 to Golgi via a RUN domain. Structure 2009 17 21 30 2JLB 18818698 Xanthomonas campestris putative OGT (XCC0866), complex with UDP- GlcNAc phosphonate analogue 2008-09-07 2008-11-25 Clarke, A.J.,Hurtado-Guerrero, R.,Pathak, S.,Schuttelkopf, A.W.,Borodkin, V.,Shepherd, S.M.,Ibrahim, A.F.M.,Van Aalten, D.M.F. Structural Insights Into Mechanism and Specificity of O-Glcnac Transferase. Embo J. 2008 27 2780 0 2V51 19008859 Structure of MAL-RPEL1 complexed to actin 2008-10-01 2008-11-25 Mouilleron, S.,Guettler, S.,Langer, C.A.,Treisman, R.,McDonald, N.Q. Molecular basis for G-actin binding to RPEL motifs from the serum response factor coactivator MAL. EMBO J. 2008 27 3198 3208 2VYR 19084022 Structure of human MDM4 N-terminal domain bound to a single domain antibody 2008-07-28 2008-11-25 Yu, G.W.,Vaysburd, M.,Allen, M.D.,Settanni, G.,Fersht, A.R. Structure of Human Mdm4 N-Terminal Domain Bound to a Single-Domain Antibody. J.Mol.Biol. 2009 385 1578 0 3C9Z 18798567 Sambucus nigra agglutinin II (SNA-II), tetragonal crystal form 2008-02-19 2008-11-25 Maveyraud, L.,Niwa, H.,Guillet, V.,Svergun, D.I.,Konarev, P.V.,Palmer, R.A.,Peumans, W.J.,Rouge, P.,Van Damme, E.J.,Reynolds, C.D.,Mourey, L. Structural basis for sugar recognition, including the Tn carcinoma antigen, by the lectin SNA-II from Sambucus nigra Proteins 2009 75 89 103 3CA0 18798567 Sambucus nigra agglutinin II (SNA-II), hexagonal crystal form 2008-02-19 2008-11-25 Maveyraud, L.,Niwa, H.,Guillet, V.,Svergun, D.I.,Konarev, P.V.,Palmer, R.A.,Peumans, W.J.,Rouge, P.,Van Damme, E.J.,Reynolds, C.D.,Mourey, L. Structural basis for sugar recognition, including the Tn carcinoma antigen, by the lectin SNA-II from Sambucus nigra Proteins 2009 75 89 103 3DWT 19010777 Structure of CabBCII-10 nanobody 2008-07-23 2008-12-02 Vincke, C.,Loris, R.,Saerens, D.,Martinez-Rodriguez, S.,Muyldermans, S.,Conrath, K. General strategy to humanize a camelid single-domain antibody and identification of a universal humanized nanobody scaffold. J.Biol.Chem. 2008 0 0 0 3E26 19015727 Crystal structure of M. tuberculosis glucosyl-3-phosphoglycerate synthase 2008-08-05 2008-12-02 Pereira, P.J.B.,Empadinhas, N.,Albuquerque, L.,Sa-Moura, B.,da Costa, M.S.,Macedo-Ribeiro, S. Mycobacterium tuberculosis glucosyl-3-phosphoglycerate synthase: structure of a key enzyme in methylglucose lipopolysaccharide biosynthesis Plos One 2008 3 0 0 2W42 19187762 THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT DNA DUPLEX. 2008-11-19 2008-12-09 Parker, J.S.,Parizotto, E.A.,Wang, M.,Roe, S.M.,Barford, D. Enhancement of the Seed-Target Recognition Step in RNA Silencing by a Piwi-Mid Domain Protein Mol.Cell 2009 33 204 0 2VZ2 19053775 Human MAO B in complex with mofegiline 2008-07-29 2008-12-16 Milczek, E.M.,Bonivento, D.,Binda, C.,Mattevi, A.,McDonald, I.A.,Edmondson, D.E. Structural and mechanistic studies of mofegiline inhibition of recombinant human monoamine oxidase B. J. Med. Chem. 2008 51 8019 8026 3BNZ 21696158 Crystal structure of Thymidylate Synthase ternary complex with dUMP and 8A inhibitor 2007-12-15 2008-12-16 Mangani, S.,Cancian, L.,Leone, R.,Pozzi, C.,Lazzari, S.,Luciani, R.,Ferrari, S.,Costi, M.P. Identification of the binding modes of N-phenylphthalimides inhibiting bacterial thymidylate synthase through X-ray crystallography screening J.Med.Chem. 2011 54 5454 5467 3DM6 18842420 Beta-secretase 1 complexed with statine-based inhibitor 2008-06-30 2008-12-16 Back, M.,Nyhlen, J.,Kvarnstrom, I.,Appelgren, S.,Borkakoti, N.,Jansson, K.,Lindberg, J.,Nystrom, S.,Hallberg, A.,Rosenquist, S.,Samuelsson, B. Design, synthesis and SAR of potent statine-based BACE-1 inhibitors: exploration of P1 phenoxy and benzyloxy residues Bioorg.Med.Chem. 2008 16 9471 9486 3DM6 18842420 Beta-secretase 1 complexed with statine-based inhibitor 2008-06-30 2008-12-16 Back, M.,Nyhlen, J.,Kvarnstrom, I.,Appelgren, S.,Borkakoti, N.,Jansson, K.,Lindberg, J.,Nystrom, S.,Hallberg, A.,Rosenquist, S.,Samuelsson, B. Design, synthesis and SAR of potent statine-based BACE-1 inhibitors: exploration of P1 phenoxy and benzyloxy residues Bioorg.Med.Chem. 2008 16 9471 9486 3F03 Crystal structure of Pentaerythritol Tetranitrate Reductase complex with 1-nitrocyclohexene 2008-10-24 2008-12-16 Toogood, H.S.,Fryszkowska, A.,Hare, V.,Fisher, K.,Roujeinikova, A.,Leys, D.,Gardiner, J.M.,Stephens, G.M.,Scrutton, N.S. Structure-based insight into the asymmetric bioreduction of the C=C double bond of alpha,beta-unsaturated nitroalkenes by pentaerythritol tetranitrate reductase. To be published 0 0 0 0 3FCG 19032149 Crystal Structure Analysis of the Middle Domain of the Caf1A Usher 2008-11-21 2008-12-16 Yu, X.,Visweswaran, G.R.,Duck, Z.,Marupakula, S.,MacIntyre, S.,Knight, S.D.,Zavialov, A.V. Caf1A usher possesses a Caf1 subunit-like domain that is crucial for Caf1 fibre secretion Biochem.J. 2009 418 541 551 2VU8 19020355 Crystal structure of an insect inhibitor with a fungal trypsin 2008-05-21 2008-12-23 Leone, P.,Roussel, A.,Kellenberger, C. Structure of Locusta Migratoria Protease Inhibitor 3 (Lmpi-3) in Complex with Fusarium Oxysporum Trypsin. Acta Crystallogr.,Sect.D 2008 64 1165 0 2W5B 19124027 Human Nek2 kinase ATPgammaS-bound 2008-12-08 2008-12-23 Westwood, I.,Cheary, D.M.,Baxter, J.E.,Richards, M.W.,Van Montfort, R.L.,Fry, A.M.,Bayliss, R. Insights Into the Conformational Variability and Regulation of Human Nek2 Kinase. J.Mol.Biol. 2009 386 476 0 2W6K The crystal structure at 1.7 A resolution of CobE, a protein from the cobalamin (vitamin B12) biosynthetic pathway 2008-12-18 2008-12-30 Vevodova, J.,Smith, D.,Mcgoldrick, H.,Deery, E.,Murzin, A.G.,Warren, M.J.,Wilson, K.S. The Crystal Structure at 1.7 A Resolution of Cobe, a Protein from the Cobalamin (Vitamin B12) Biosynthetic Pathway To be Published 0 0 0 0 2W6L The crystal structure at 1.7 A resolution of CobE, a protein from the cobalamin (vitamin B12) biosynthetic pathway 2008-12-18 2008-12-30 Vevodova, J.,Smith, D.,Mcgoldrick, H.,Deery, E.,Murzin, A.G.,Warren, M.J.,Wilson, K.S. The Crystal Structure at 1.7 A Resolution of Cobe, a Protein from the Cobalamin (Vitamin B12) Biosynthetic Pathway To be Published 0 0 0 0 3CDS 19053776 Crystal structure of the complex between PPAR-gamma and the agonist LT248 (clofibric acid analogue) 2008-02-27 2008-12-30 Montanari, R.,Saccoccia, F.,Scotti, E.,Crestani, M.,Godio, C.,Gilardi, F.,Loiodice, F.,Fracchiolla, G.,Laghezza, A.,Tortorella, P.,Lavecchia, A.,Novellino, E.,Mazza, F.,Aschi, M.,Pochetti, G. Crystal Structure of the Peroxisome Proliferator-Activated Receptor gamma (PPARgamma) Ligand Binding Domain Complexed with a Novel Partial Agonist: A New Region of the Hydrophobic Pocket Could Be Exploited for Drug Design J.Med.Chem. 2008 51 7768 7776 3EKB 18721129 Crystal structure of the A264C mutant heme domain of cytochrome P450 BM3 2008-09-19 2008-12-30 Girvan, H.M.,Toogood, H.S.,Littleford, R.E.,Seward, H.E.,Smith, W.E.,Ekanem, I.S.,Leys, D.,Cheesman, M.R.,Munro, A.W. Novel haem co-ordination variants of flavocytochrome P450BM3. Biochem.J. 2009 417 65 76 3EKD 18721129 Crystal structure of the A264M heme domain of cytochrome P450 BM3 2008-09-19 2008-12-30 Girvan, H.M.,Toogood, H.S.,Littleford, R.E.,Seward, H.E.,Smith, W.E.,Ekanem, I.S.,Leys, D.,Cheesman, M.R.,Munro, A.W. Novel haem co-ordination variants of flavocytochrome P450BM3. 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J.Mol.Biol. 2009 391 86 97 3CDP 22341573 Crystal structure of PPAR-gamma LBD complexed with a partial agonist, analogue of clofibric acid 2008-02-27 2009-01-13 Fracchiolla, G.,Laghezza, A.,Piemontese, L.,Parente, M.,Lavecchia, A.,Pochetti, G.,Montanari, R.,Di Giovanni, C.,Carbonara, G.,Tortorella, P.,Novellino, E.,Loiodice, F. Synthesis, biological evaluation and molecular investigation of fluorinated peroxisome proliferator-activated receptors alpha/gamma dual agonists Bioorg.Med.Chem. 2012 20 2141 2151 2W23 19158088 Structure of mutant W169Y of Pleurotus eryngii versatile peroxidase (VP) 2008-10-23 2009-01-20 Ruiz-Duenas, F.J.,Pogni, R.,Morales, M.,Giansanti, S.,Mate, M.J.,Romero, A.,Martinez, M.J.,Basosi, R.,Martinez, A.T. Protein Radicals in Fungal Versatile Peroxidase: Catalytic Tryptophan Radical in Both Compound I and Compound II and Studies on W164Y, W164H, and W164S Variants. J.Biol.Chem. 2009 284 7986 0 2W3J 19218457 Structure of a family 35 carbohydrate binding module from an environmental isolate 2008-11-12 2009-01-20 Montanier, C.,Van Bueren, A.L.,Dumon, C.,Flint, J.E.,Correia, M.A.,Prates, J.A.,Firbank, S.J.,Lewis, R.J.,Grondin, G.G.,Ghinet, M.G.,Gloster, T.M.,Herve, C.,Knox, J.P.,Talbot, B.G.,Turkenburg, J.P.,Kerovuo, J.,Brzezinski, R.,Fontes, C.M.G.A.,Davies, G.J.,Boraston, A.B.,Gilbert, H.J. Evidence that Family 35 Carbohydrate Binding Modules Display Conserved Specificity But Divergent Function. Proc.Natl.Acad.Sci.USA 2009 106 3065 0 3BYX 21696158 Lactobacillus CASEI Thymidylate Synthase Ternary Complex with DUMP and the Phtalimidic Derivative C00 in Multiple Binding Modes 2008-01-16 2009-01-20 Mangani, S.,Cancian, L.,Leone, R.,Pozzi, C.,Lazzari, S.,Luciani, R.,Ferrari, S.,Costi, M.P. 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Crystal Structures of a Family 8 Polysaccharide Lyase Reveal Open and Highly Occluded Substrate-Binding Cleft Conformations. Proteins 2011 79 965 0 2XO5 21612216 RIBONUCLEOTIDE REDUCTASE Y731NH2Y MODIFIED R1 SUBUNIT OF E. COLI 2010-08-09 2010-08-18 Minnihan, E.C.,Seyedsayamdost, M.R.,Uhlin, U.,Stubbe, J. Kinetics of Radical Intermediate Formation and Deoxynucleotide Production in 3-Aminotyrosine- Substituted Escherichia Coli Ribonucleotide Reductases. J.Am.Chem.Soc. 2011 133 9430 0 3M9X 20678502 Open liganded crystal structure of xylose binding protein from Escherichia coli 2010-03-22 2010-08-18 Sooriyaarachchi, S.,Ubhayasekera, W.,Park, C.,Mowbray, S.L. Conformational changes and ligand recognition of Escherichia coli D-xylose binding protein revealed J.Mol.Biol. 2010 402 657 668 2XGO 20640461 XcOGT in complex with UDP-S-GlcNAc 2010-06-07 2010-08-25 Dorfmueller, H.C.,Borodkin, V.S.,Blair, D.E.,Pathak, S.,Navratilova, I.,Van Aalten, D.M. 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J.Am.Chem.Soc. 2011 133 8436 0 2WV7 20541512 Intracellular subtilisin precursor from B. clausii 2009-10-15 2010-09-08 Vevodova, J.,Gamble, M.,Kunze, G.,Ariza, A.,Dodson, E.,Jones, D.D.,Wilson, K.S. Crystal Structure of an Intracellular Subtilisin Reveals Novel Structural Features Unique to This Subtilisin Family. Structure 2010 18 744 0 2WWT 20541512 Intracellular subtilisin precursor from B. clausii 2009-10-27 2010-09-08 Vevodova, J.,Gamble, M.,Kunze, G.,Ariza, A.,Dodson, E.,Jones, D.D.,Wilson, K.S. Crystal Structure of an Intracellular Subtilisin Reveals Novel Structural Features Unique to This Subtilisin Family. Structure 2010 18 744 0 3NFF 20797630 Crystal structure of extended Dimerization module of RNA polymerase I subcomplex A49/A34.5 2010-06-10 2010-09-08 Geiger, S.R.,Lorenzen, K.,Schreieck, A.,Hanecker, P.,Kostrewa, D.,Heck, A.J.,Cramer, P. RNA Polymerase I Contains a TFIIF-Related DNA-Binding Subcomplex. Mol.Cell 2010 39 583 594 2XLT 20807767 Joint-functions of protein residues and NADP(H) in oxygen-activation by flavin-containing monooxygenase: complex with 3-Acetylpyridine adenine dinucleotide phosphate (APADP) 2010-07-21 2010-09-15 Orru, R.,Pazmino, D.E.,Fraaije, M.W.,Mattevi, A. Joint functions of protein residues and NADP(H) in oxygen activation by flavin-containing monooxygenase. J. Biol. Chem. 2010 285 35021 35028 3O2A 20805031 Ligand-binding domain of GluA2 (flip) ionotropic glutamate receptor in complex with an allosteric modulator 2010-07-22 2010-09-15 Jamieson, C.,Basten, S.,Campbell, R.A.,Cumming, I.A.,Gillen, K.J.,Gillespie, J.,Kazemier, B.,Kiczun, M.,Lamont, Y.,Lyons, A.J.,Maclean, J.K.,Moir, E.M.,Morrow, J.A.,Papakosta, M.,Rankovic, Z.,Smith, L. A novel series of positive modulators of the AMPA receptor: discovery and structure based hit-to-lead studies. Bioorg.Med.Chem.Lett. 2010 20 5753 5756 2XNE 20833547 Structure of Aurora-A bound to an imidazopyrazine inhibitor 2010-08-02 2010-09-22 Bouloc, N.,Large, J.M.,Kosmopoulou, M.,Sun, C.,Faisal, A.,Matteucci, M.,Reynisson, J.,Brown, N.,Atrash, B.,Blagg, J.,McDonald, E.,Linardopoulos, S.,Bayliss, R.,Bavetsias, V. Structure-based design of imidazo[1,2-a]pyrazine derivatives as selective inhibitors of Aurora-A kinase in cells. Bioorg. Med. Chem. Lett. 2010 20 5988 5993 2XNG 20833547 Structure of Aurora-A bound to a selective imidazopyrazine inhibitor 2010-08-02 2010-09-22 Bouloc, N.,Large, J.M.,Kosmopoulou, M.,Sun, C.,Faisal, A.,Matteucci, M.,Reynisson, J.,Brown, N.,Atrash, B.,Blagg, J.,McDonald, E.,Linardopoulos, S.,Bayliss, R.,Bavetsias, V. Structure-based design of imidazo[1,2-a]pyrazine derivatives as selective inhibitors of Aurora-A kinase in cells. Bioorg. Med. Chem. Lett. 2010 20 5988 5993 3NPZ 20875426 Prolactin Receptor (PRLR) Complexed with the Natural Hormone (PRL) 2010-06-29 2010-10-06 van Agthoven, J.,Zhang, C.,Tallet, E.,Raynal, B.,Hoos, S.,Baron, B.,England, P.,Goffin, V.,Broutin, I. Structural characterization of the stem-stem dimerization interface between prolactin receptor chains complexed with the natural hormone. J.Mol.Biol. 2010 404 112 126 2WP6 21851087 Trypanosoma brucei trypanothione reductase in complex with 3,4- dihydroquinazoline inhibitor (DDD00071494) 2009-08-03 2010-10-13 Patterson, S.,Alphey, M.S.,Jones, D.C.,Shanks, E.J.,Street, I.P.,Frearson, J.A.,Wyatt, P.G.,Gilbert, I.H.,Fairlamb, A.H. Dihydroquinazolines as a Novel Class of Trypanosoma Brucei Trypanothione Reductase Inhibitors: Discovery, Synthesis, and Characterization of Their Binding Mode by Protein Crystallography. J.Med.Chem. 2011 54 6514 0 2WPC 21851087 Trypanosoma brucei trypanothione reductase in complex with 3,4- dihydroquinazoline inhibitor (DDD00073357) 2009-08-05 2010-10-13 Patterson, S.,Alphey, M.S.,Jones, D.C.,Shanks, E.J.,Street, I.P.,Frearson, J.A.,Wyatt, P.G.,Gilbert, I.H.,Fairlamb, A.H. Dihydroquinazolines as a Novel Class of Trypanosoma Brucei Trypanothione Reductase Inhibitors: Discovery, Synthesis, and Characterization of Their Binding Mode by Protein Crystallography. J.Med.Chem. 2011 54 6514 0 2WPE 21851087 Trypanosoma brucei trypanothione reductase in complex with 3,4- dihydroquinazoline inhibitor (DDD00073359) 2009-08-06 2010-10-13 Patterson, S.,Alphey, M.S.,Jones, D.C.,Shanks, E.J.,Street, I.P.,Frearson, J.A.,Wyatt, P.G.,Gilbert, I.H.,Fairlamb, A.H. Dihydroquinazolines as a Novel Class of Trypanosoma Brucei Trypanothione Reductase Inhibitors: Discovery, Synthesis, and Characterization of Their Binding Mode by Protein Crystallography. J.Med.Chem. 2011 54 6514 0 2XSU 20869471 Crystal structure of the A72G mutant of Acinetobacter radioresistens catechol 1,2 dioxygenase 2010-09-30 2010-10-13 Micalella, C.,Martignon, S.,Bruno, S.,Pioselli, B.,Caglio, R.,Valetti, F.,Pessione, E.,Giunta, C.,Rizzi, M. X-Ray Crystallography, Mass Spectrometry and Single Crystal Microspectrophotometry: A Multidisciplinary Characterization of Catechol 1,2 Dioxygenase. Biochim.Biophys.Acta 2011 1814 817 0 2XSV 20869471 Crystal structure of L69A mutant Acinetobacter radioresistens catechol 1,2 dioxygenase 2010-09-30 2010-10-13 Micalella, C.,Martignon, S.,Bruno, S.,Pioselli, B.,Caglio, R.,Valetti, F.,Pessione, E.,Giunta, C.,Rizzi, M. X-Ray Crystallography, Mass Spectrometry and Single Crystal Microspectrophotometry: A Multidisciplinary Characterization of Catechol 1,2 Dioxygenase. Biochim.Biophys.Acta 2011 1814 817 0 3O8E 20941397 Structure of extracelllar portion of CD46 in complex with Adenovirus type 11 knob 2010-08-03 2010-10-13 Persson, B.D.,Schmitz, N.B.,Santiago, C.,Zocher, G.,Larvie, M.,Scheu, U.,Casasnovas, J.M.,Stehle, T. Structure of the extracellular portion of CD46 provides insights into its interactions with complement proteins and pathogens. Plos Pathog. 2010 6 0 0 3K7O 21205211 Structure of type B ribose 5-phosphate isomerase from Trypanosoma cruzi 2009-10-13 2010-10-27 Stern, A.L.,Naworyta, A.,Cazzulo, J.J.,Mowbray, S.L. Structures of type B ribose 5-phosphate isomerase from Trypanosoma cruzi shed light on the determinants of sugar specificity in the structural family. Febs J. 2011 278 793 808 3K7P 21205211 Structure of mutant of ribose 5-phosphate isomerase type B from Trypanosoma cruzi. 2009-10-13 2010-10-27 Stern, A.L.,Naworyta, A.,Cazzulo, J.J.,Mowbray, S.L. Structures of type B ribose 5-phosphate isomerase from Trypanosoma cruzi shed light on the determinants of sugar specificity in the structural family. Febs J. 2011 278 793 808 3LEO 20980252 Structure of human Leukotriene C4 synthase mutant R31Q in complex with glutathione 2010-01-15 2010-10-27 Rinaldo-Matthis, A.,Wetterholm, A.,Martinez Molina, D.,Holm, J.,Niegowski, D.,Ohlson, E.,Nordlund, P.,Morgenstern, R.,Haeggstrom, J.Z. Arginine 104 is a key catalytic residue in leukotriene C4 synthase. J.Biol.Chem. 2010 285 40771 40776 3KIA 21166895 Crystal structure of mannosyl-3-phosphoglycerate synthase from Rubrobacter xylanophilus 2009-11-01 2010-11-03 Empadinhas, N.,Pereira, P.J.B.,Albuquerque, L.,Costa, J.,Sa-Moura, B.,Marques, A.T.,Macedo-Ribeiro, S.,da Costa, M.S. 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High-resolution crystal structures of trimeric and rod phycocyanin. J.Mol.Biol. 2011 405 201 213 2XTT 21097875 Bovine trypsin in complex with evolutionary enhanced Schistocerca gregaria protease inhibitor 1 (SGPI-1-P02) 2010-10-12 2010-11-10 Wahlgren, W.Y.,Pal, G.,Kardos, J.,Porrogi, P.,Szenthe, B.,Patthy, A.,Graf, L.,Katona, G. The catalytic aspartate is protonated in the Michaelis complex formed between trypsin and an in vitro evolved substrate-like inhibitor: a refined mechanism of serine protease action. J.Biol.Chem. 2011 286 3587 3596 3MSH 21059355 Crystal structure of Hepatitis B X-Interacting Protein at high resolution 2010-04-29 2010-11-10 Garcia-Saez, I.,Lacroix, F.B.,Blot, D.,Gabel, F.,Skoufias, D.A. Structural Characterization of HBXIP: The Protein That Interacts with the Anti-Apoptotic Protein Survivin and the Oncogenic Viral Protein HBx. J.Mol.Biol. 2011 405 331 340 3O6M 21035463 Anti-Tat HIV 11H6H1 Fab' complexed with a 9-mer Tat peptide 2010-07-29 2010-11-10 Serriere, J.,Dugua, J.M.,Bossus, M.,Verrier, B.,Haser, R.,Gouet, P.,Guillon, C. Fab'-induced folding of antigenic N-terminal peptides from intrinsically disordered HIV-1 Tat revealed by X-ray crystallography. J.Mol.Biol. 2011 405 33 42 3O9O 21045286 Crystal Structure of GBS1074, an Esat-6 homologue from Group B Streptococcus 2010-08-04 2010-11-10 Shukla, A.,Pallen, M.,Anthony, M.,White, S.A. The homodimeric GBS1074 from Streptococcus agalactiae. Acta Crystallogr. Sect. F Stru 2010 66 1421 1425 2XPO 21057455 Crystal structure of a Spt6-Iws1(Spn1) complex from Encephalitozoon cuniculi, Form II 2010-08-27 2010-11-17 Diebold, M.-L.,Koch, M.,Loeliger, E.,Cura, V.,Winston, F.,Cavarelli, J.,Romier, C. The Structure of an Iws1/Spt6 Complex Reveals an Interaction Domain Conserved in Tfiis, Elongin a and Med26 Embo J. 2010 29 3979 0 2XXB Penta-mutant of Thermus thermophilus lactate dehydrogenase, complex with AMP 2010-11-09 2010-11-17 Diop, F.,Coquelle, N.,Vellieux, F.M.D. Lactate Dehydrogenase from T. Thermophilus, Penta-Mutant (Complex with AMP) To be Published 0 0 0 0 3NQ0 21040728 Crystal Structure of Tyrosinase from Bacillus megaterium crystallized in the absence of Zinc 2010-06-29 2010-11-17 Sendovski, M.,Kanteev, M.,Shuster Ben-Yosef, V.,Adir, N.,Fishman, A. First structures of an active bacterial tyrosinase reveal copper plasticity. J.Mol.Biol. 2011 405 227 237 3NQ1 21040728 Crystal Structure of Tyrosinase from Bacillus megaterium in complex with inhibitor kojic acid 2010-06-29 2010-11-17 Sendovski, M.,Kanteev, M.,Shuster Ben-Yosef, V.,Adir, N.,Fishman, A. First structures of an active bacterial tyrosinase reveal copper plasticity. 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Crystal Structure of the Wild Type and Two Mutants of the Cp1 Hydrolytic Domain from Aquifex Aeolicus Leucyl-tRNA Synthetase To be Published 0 0 0 0 2XXJ Penta mutant of lactate dehydrogenase from Thermus thermophilus, ternary complex 2010-11-10 2010-11-24 Tickle, J.,De Mendoza Barbera, E.,Vellieux, F.M.D. Lactate Dehydrogenase from T. Thermophilus, Penta- Mutant (Ternary Complex) To be Published 0 0 0 0 2XMC 21091433 G117H mutant of human butyrylcholinesterase in complex with fluoride anion 2010-07-27 2010-12-01 Nachon, F.,Carletti, E.,Wandhammer, M.,Nicolet, Y.,Schopfer, L.M.,Masson, P.,Lockridge, O. X-Ray Crystallographic Snapshots of Reaction Intermediates in the G117H Mutant of Human Butyrylcholinesterase, a Nerve Agent Target Engineered Into a Catalytic Bioscavenge Biochem.J. 2011 434 73 0 3MKM 21082835 Crystal structure of the E. coli pyrimidine nucleoside hydrolase YeiK (Apo-form) 2010-04-15 2010-12-01 Fornili, A.,Giabbai, B.,Garau, G.,Degano, M. 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Ligand Migration in the Apolar Tunnel of Cerebratulus Lacteus Mini-Hemoglobin. J.Biol.Chem. 2011 286 5347 0 2XKI 21147768 Aquo-met structure of C.lacteus mini-Hb 2010-07-08 2010-12-08 Pesce, A.,Nardini, M.,Dewilde, S.,Capece, L.,Marti, M.A.,Congia, S.,Salter, M.D.,Blouin, G.C.,Estrin, D.A.,Ascenzi, P.,Moens, L.,Bolognesi, M.,Olson, J.S. Ligand Migration in the Apolar Tunnel of Cerebratulus Lacteus Mini-Hemoglobin. J.Biol.Chem. 2011 286 5347 0 2XSR 20869471 Crystal structure of wild type Acinetobacter radioresistens catechol 1,2 dioxygenase 2010-09-30 2010-12-08 Micalella, C.,Martignon, S.,Bruno, S.,Pioselli, B.,Caglio, R.,Valetti, F.,Pessione, E.,Giunta, C.,Rizzi, M. X-Ray Crystallography, Mass Spectrometry and Single Crystal Microspectrophotometry: A Multidisciplinary Characterization of Catechol 1,2 Dioxygenase. 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J.Mol.Recognit. 2011 24 371 377 2XGT 21134380 Asparaginyl-tRNA synthetase from Brugia malayi complexed with the sulphamoyl analogue of asparaginyl-adenylate 2010-06-07 2010-12-15 Crepin, T.,Peterson, F.,Haertlein, M.,Jensen, D.,Wang, C.,Cusack, S.,Kron, M. A Hybrid Structural Model of the Complete Brugia Malayi Cytoplasmic Asparaginyl-tRNA Synthetase. J.Mol.Biol. 2011 405 1056 0 3IXP Crystal structure of the ecdysone receptor bound to BYI08346 2009-09-04 2010-12-15 Moras, D.,Billas, I.M.L.,Browning, C. Adaptability of the ecdysone receptor bound to synthetic ligands To be Published 0 0 0 0 3KZ7 24879919 C-terminal domain of Murine FKBP25 rapamycin complex 2009-12-08 2010-12-15 Galat, A.,Thai, R.,Stura, E.A. Diversified targets of FKBP25 and its complex with rapamycin. 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Structural and functional analysis of the flexible regions of the catalytic alpha-subunit of protein kinase CK2 to be published 0 0 0 0 3ZZV 22170069 BambL complexed with Htype2 tetrasaccharide 2011-09-05 2011-12-21 Audfray, A.,Claudinon, J.,Abounit, S.,Ruvoen-Clouet, N.,Larson, G.,Smith, D.F.,Wimmerova, M.,Le Pendu, J.,Romer, W.,Varrot, A.,Imberty, A. Fucose-Binding Lectin from Opportunistic Pathogen Burkholderia Ambifaria Binds to Both Plant and Human Oligosaccharidic Epitopes. J.Biol.Chem. 2012 287 4335 0 4A73 22319152 SINGLE POINT MUTANT OF THERMUS THERMOPHILUS LACTATE DEHYDROGENASE 2011-11-10 2011-12-28 Colletier, J.P.,Aleksandrov, A.,Coquelle, N.,Mraihi, S.,De Mendoza-Barbera, E.,Field, M.,Madern, D. Sampling the Conformational Energy Landscape of a Hyperthermophilic Protein by Engineering Key Substitutions Mol.Biol.Evol. 2012 29 1683 0 2YAU 21833767 X-ray structure of the Leishmania infantum tryopanothione reductase in complex with auranofin 2011-02-24 2012-01-11 Ilari, A.,Baiocco, P.,Messori, L.,Fiorillo, A.,Boffi, A.,Gramiccia, M.,Di Muccio, T.,Colotti, G. A Gold-Containing Drug Against Parasitic Polyamine Metabolism: The X-Ray Structure of Trypanothione Reductase from Leishmania Infantum in Complex with Auranofin Reveals a Dual Mechanism of Enzyme Inhibition. Amino Acids 2012 42 803 0 3PYM Structure of GAPDH 3 from S.cerevisiae at 2.0 A resolution 2010-12-13 2012-01-11 0 0 0 0 3R8I 22081932 Crystal Structure of PPARgamma with an achiral ureidofibrate derivative (RT86) 2011-03-24 2012-01-11 Porcelli, L.,Gilardi, F.,Laghezza, A.,Piemontese, L.,Mitro, N.,Azzariti, A.,Altieri, F.,Cervoni, L.,Fracchiolla, G.,Giudici, M.,Guerrini, U.,Lavecchia, A.,Montanari, R.,Di Giovanni, C.,Paradiso, A.,Pochetti, G.,Simone, G.M.,Tortorella, P.,Crestani, M.,Loiodice, F. Synthesis, characterization and biological evaluation of ureidofibrate-like derivatives endowed with peroxisome proliferator-activated receptor activity. J.Med.Chem. 2012 55 37 54 3UCQ 22210773 Crystal structure of amylosucrase from Deinococcus geothermalis 2011-10-27 2012-01-11 Guerin, F.,Barbe, S.,Pizzut-Serin, S.,Potocki-Veronese, G.,Guieysse, D.,Guillet, V.,Monsan, P.,Mourey, L.,Remaud-Simeon, M.,Andre, I.,Tranier, S. 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J.Biol.Chem. 2012 287 26352 0 4A02 22210154 X-ray crystallographic structure of EfCBM33A 2011-09-07 2012-01-11 Vaaje-Kolstad, G.,Bohle, L.A.,Gaseidnes, S.,Dalhus, B.,Bjoras, M.,Mathiesen, G.,Eijsink, V.G.H. Characterization of the Chitinolytic Machinery of Enterococcus Faecalis V583 and High Resolution Structure of its Oxidative Cbm33 Enzyme J.Mol.Biol. 2012 416 239 0 4A7J 22231400 Symmetric Dimethylation of H3 Arginine 2 is a Novel Histone Mark that Supports Euchromatin Maintenance 2011-11-14 2012-01-11 Migliori, V.,Muller, J.,Phalke, S.,Low, D.,Bezzi, M.,Chuenmok, W.,Sahu, S.K.,Gunaratne, J.,Capasso, P.,Bassi, C.,Cecatiello, V.,Demarco, A.,Blackstock, W.,Kuznetsov, V.,Amati, B.,Mapelli, M.,Guccione, E. Symmetric Dimethylation of H3R2 is a Newly Identified Histone Mark that Supports Euchromatin Maintenance Nat.Struct.Mol.Biol. 2012 19 136 0 2Y1M 22266821 Structure of native c-Cbl 2010-12-08 2012-01-18 Dou, H.,Buetow, L.,Hock, A.,Sibbet, G.J.,Vousden, K.H.,Huang, D.T. 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Nucleic Acids Res. 2012 40 4158 4167 3R5C 22359568 Pseudomonas aeruginosa DapD (PA3666) in complex with CoA and succinate 2011-03-18 2012-01-25 Schnell, R.,Oehlmann, W.,Sandalova, T.,Braun, Y.,Huck, C.,Maringer, M.,Singh, M.,Schneider, G. Tetrahydrodipicolinate N-succinyltransferase and dihydrodipicolinate synthase from Pseudomonas aeruginosa: structure analysis and gene deletion. Plos One 2012 7 0 0 3U9Y 22233320 Crystal structure of human tankyrase 2 catalytic domain in complex with olaparib 2011-10-20 2012-01-25 Narwal, M.,Venkannagari, H.,Lehtio, L. Structural basis of selective inhibition of human tankyrases. J.Med.Chem. 2012 55 1360 1367 4AEA 22223648 Dimeric alpha-cobratoxin X-ray structure: Localization of intermolecular disulfides and possible mode of binding to nicotinic acetylcholine receptors 2012-01-09 2012-01-25 Osipov, A.V.,Rucktooa, P.,Kasheverov, I.E.,Filkin, S.Y.,Starkov, V.G.,Andreeva, T.V.,Sixma, T.K.,Bertrand, D.,Utkin, Y.N.,Tsetlin, V.I. 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Proteins 2012 80 1658 0 4AKO 20200715 Mutations in the neighbourhood of CotA-laccase trinuclear site: E498L mutant 2012-02-28 2012-03-14 Chen, Z.,Durao, P.,Silva, C.S.,Pereira, M.M.,Todorovic, S.,Hildebrandt, P.,Bento, I.,Lindley, P.F.,Martins, L.O. The Role of Glu498 in the Dioxygen Reactivity of Cota-Laccase from Bacillus Subtilis. Dalton Trans 2010 39 2875 0 4AKP 20200715 Mutations in the neighbourhood of CotA-laccase trinuclear site: E498T mutant 2012-02-28 2012-03-14 Chen, Z.,Durao, P.,Silva, C.S.,Pereira, M.M.,Todorovic, S.,Hildebrandt, P.,Bento, I.,Lindley, P.F.,Martins, L.O. The Role of Glu498 in the Dioxygen Reactivity of Cota-Laccase from Bacillus Subtilis. Dalton Trans 2010 39 2875 0 3U69 22457833 Unliganded wild-type human thrombin 2011-10-12 2012-04-11 Figueiredo, A.C.,Clement, C.C.,Zakia, S.,Gingold, J.,Philipp, M.,Pereira, P.J. Rational design and characterization of d-phe-pro-d-arg-derived direct thrombin inhibitors. 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Crystal structure of cathepsin A, a novel target for the treatment of cardiovascular diseases. Biochem. Biophys. Res. Commun. 2014 445 451 456 3ZOL 26047471 M.acetivorans protoglobin F93Y mutant in complex with cyanide 2013-02-22 2014-03-12 Tilleman, L.,Abbruzzetti, S.,Ciaccio, C.,De Sanctis, G.,Nardini, M.,Pesce, A.,Desmet, F.,Moens, L.,Van Doorslaer, S.,Bruno, S.,Bolognesi, M.,Ascenzi, P.,Coletta, M.,Viappiani, C.,Dewilde, S. Structural Bases for the Regulation of Co Binding in the Archaeal Protoglobin from Methanosarcina Acetivorans. Plos One 2015 10 25959 0 3ZOU 25760619 Native structure of Farnesyl Pyrophosphate Synthase from Pseudomonas aeruginosa PA01, with bound fragment SPB02696, and substrate geranyl pyrophosphate. 2013-02-25 2014-03-12 Schmidberger, J.W.,Schnell, R.,Schneider, G. 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Plos One 2015 10 21494 0 4ORS 25084332 Three-dimensional structure of the C65A mutant of Human lipocalin-type Prostaglandin D Synthase apo-form 2014-02-12 2014-08-06 Perduca, M.,Bovi, M.,Bertinelli, M.,Bertini, E.,Destefanis, L.,Carrizo, M.E.,Capaldi, S.,Monaco, H.L. High-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase. Acta Crystallogr.,Sect.D 2014 70 2125 2138 4TX6 25063338 AfChiA1 in complex with compound 1 2014-07-02 2014-08-06 Lockhart, D.E.,Schuettelkopf, A.W.,Blair, D.E.,van Aalten, D.M.F. Screening-based discovery of Aspergillus fumigatus plant-type chitinase inhibitors FEBS Lett 2014 588 3282 0 4TXE 25063338 ScCTS1 in complex with compound 5 2014-07-03 2014-08-06 Lockhart, D.E.,Schuettelkopf, A.W.,Blair, D.E.,van Aalten, D.M.F. Screening-based discovery of Aspergillus fumigatus plant-type chitinase inhibitors FEBS Lett 2014 588 3282 0 4BY5 25074811 Crystal structure of Drosophila Frq2 2013-07-17 2014-08-13 Romero-Pozuelo, J.,Dason, J.S.,Mansilla, A.,Banos-Mateos, S.,Sardina, J.L.,Chaves-Sanjuan, A.,Jurado-Gomez, J.,Santana, E.,Atwood, H.L.,Hernandez-Hernandez, A.,Sanchez-Barrena, M.,Ferrus, A. The Guanine-Exchange Factor Ric8A Binds the Calcium Sensor Ncs-1 to Regulate Synapse Number and Probability of Release. J.Cell.Sci. 2014 127 4246 0 4CTD 24988371 X-ray structure of an engineered OmpG loop6-deletion 2014-03-13 2014-08-13 Grosse, W.,Psakis, G.,Mertins, B.,Reiss, P.,Windisch, D.,Brademann, F.,Burck, J.,Ulrich, A.,Koert, U.,Essen, L. Structure-Based Engineering of a Minimal Porin Reveals Loop- Independent Channel Closure. Biochemistry 2014 53 4826 0 4MGK Selective activation of Epac1 and Epac2 2013-08-28 2014-09-03 Rehmann, H. Selective activation of Epac1 and Epac2 To be Published 0 0 0 0 4CSI 25195749 Crystal structure of the thermostable Cellobiohydrolase Cel7A from the fungus Humicola grisea var. thermoidea. 2014-03-07 2014-09-10 Haddad-Momeni, M.,Goedegebuur, F.,Hansson, H.,Karkehabadi, S.,Askarieh, G.,Mitchinson, C.,Larenas, E.,Stahlberg, J.,Sandgren, M. Expression, Crystal Structure and Cellulase Activity of the Thermostable Cellobiohydrolase Cel7A from the Fungus Humicola Grisea Var. Thermoidea. Acta Crystallogr.,Sect.D 2014 70 2356 0 4CAW 25706802 Crystal structure of Aspergillus fumigatus N-myristoyl transferase in complex with myristoyl CoA and a pyrazole sulphonamide ligand 2013-10-09 2014-09-17 Fang, W.,Robinson, D.A.,Raimi, O.G.,Blair, D.E.,Harrison, J.R.,Lockhart, D.E.A.,Torrie, L.S.,Ruda, G.F.,Wyatt, P.G.,Gilbert, I.H.,Van Aalten, D.M.F. N-Myristoyltransferase is a Cell Wall Target in Aspergillus Fumigatus. Acs Chem.Biol. 2015 10 1425 0 4CAX 25706802 Crystal structure of Aspergillus fumigatus N-myristoyl transferase in complex with myristoyl CoA and a pyrazole sulphonamide ligand (DDD85646) 2013-10-09 2014-09-17 Fang, W.,Robinson, D.A.,Raimi, O.G.,Blair, D.E.,Harrison, J.R.,Lockhart, D.E.A.,Torrie, L.S.,Ruda, G.F.,Wyatt, P.G.,Gilbert, I.H.,Van Aalten, D.M.F. N-Myristoyltransferase is a Cell Wall Target in Aspergillus Fumigatus. Acs Chem.Biol. 2015 10 1425 0 4MNO Crystal structure of aIF1A from Pyrococcus abyssi 2013-09-11 2014-09-17 Coureux, P.-D.,Schmitt, E.,Monestier, A.,Larquet, E.,Cladiere, L.,Menetret, J.-F.,Klaholz, B.,Mechulam, Y. Crystal structure of aIF1A from Pyrococcus abyssi To be Published 0 0 0 0 4MTZ Structure of XIAP-BIR1 in complex with NF023 2013-09-20 2014-09-24 Cossu, F.,Milani, M.,Grassi, S.,Malvezzi, F.,Corti, A.,Bolognesi, M.,Mastrangelo, E. Protein-protein interactions in nfkb pathway: novel tools to promote apoptosis in cancer therapy To be Published 0 0 0 0 4MD1 25286851 Orange species of bacteriorhodopsin from Halobacterium salinarum 2013-08-22 2014-10-08 Borshchevskiy, V.,Round, E.,Erofeev, I.,Weik, M.,Ishchenko, A.,Gushchin, I.,Mishin, A.,Willbold, D.,Buldt, G.,Gordeliy, V. Low-dose X-ray radiation induces structural alterations in proteins. Acta Crystallogr.,Sect.D 2014 70 2675 2685 4MD2 25286851 Ground state of bacteriorhodopsin from Halobacterium salinarum 2013-08-22 2014-10-08 Borshchevskiy, V.,Round, E.,Erofeev, I.,Weik, M.,Ishchenko, A.,Gushchin, I.,Mishin, A.,Willbold, D.,Buldt, G.,Gordeliy, V. Low-dose X-ray radiation induces structural alterations in proteins. Acta Crystallogr.,Sect.D 2014 70 2675 2685 4UPE 25315838 Structure of the unready Ni-A state of the S499C mutant of D. fructosovorans NiFe-hydrogenase 2014-06-16 2014-10-29 Volbeda, A.,Martin, L.,Barbier, E.,Gutierrez-Sanz, O.,De Lacey, A.L.,Liebgott, P.P.,Dementin, S.,Rousset, M.,Fontecilla-Camps, J.C. Crystallographic studies of [NiFe]-hydrogenase mutants: towards consensus structures for the elusive unready oxidized states. J. Biol. Inorg. Chem. 2015 20 11 22 4QBB 25240326 Structure of the foot-and-mouth disease virus leader proteinase in complex with inhibitor (N~2~-[(3S)-4-({(2R)-1-[(4-CARBAMIMIDAMIDOBUTYL)AMINO]-4-METHYL-1-OXOPENTAN-2-YL}AMINO)-3-HYDROXY-4-OXOBUTANOYL]-L-ARGINYL-L-PROLINAMIDE) 2014-05-07 2014-11-05 Steinberger, J.,Grishkovskaya, I.,Cencic, R.,Juliano, L.,Juliano, M.A.,Skern, T. Foot-and-mouth disease virus leader proteinase: Structural insights into the mechanism of intermolecular cleavage. Virology 2014 0 397 408 4UYK 25336584 Crystal structure of a Signal Recognition Particle Alu domain in the elongation arrest conformation 2014-09-01 2014-11-05 Bousset, L.,Mary, C.,Brooks, M.A.,Scherrer, A.,Strub, K.,Cusack, S. Crystal Structure of a Signal Recognition Particle Alu Domain in the Elongation Arrest Conformation. RNA 2014 20 1955 0 4RNJ 25447517 PaMorA phosphodiesterase domain, apo form 2014-10-24 2014-11-19 Phippen, C.W.,Mikolajek, H.,Schlaefli, H.G.,Keevil, C.W.,Webb, J.S.,Tews, I. Formation and dimerization of the phosphodiesterase active site of the Pseudomonas aeruginosa MorA, a bi-functional c-di-GMP regulator. Febs Lett. 2014 588 4631 4636 4KUK 25887755 A superfast recovering full-length LOV protein from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) 2013-05-22 2014-11-26 Endres, S.,Granzin, J.,Circolone, F.,Stadler, A.,Krauss, U.,Drepper, T.,Svensson, V.,Knieps-Grunhagen, E.,Wirtz, A.,Cousin, A.,Tielen, P.,Willbold, D.,Jaeger, K.E.,Batra-Safferling, R. Structure and function of a short LOV protein from the marine phototrophic bacterium Dinoroseobacter shibae. BMC Microbiol 2015 15 30 30 4UWJ 25412409 Crystal structure of Aspergillus fumigatus N-myristoyl transferase in complex with myristoyl CoA and a capped pyrazole sulphonamide ligand 2014-08-12 2014-12-03 Brand, S.,Norcross, N.R.,Thompson, S.,Harrison, J.R.,Smith, V.C.,Robinson, D.A.,Torrie, L.S.,McElroy, S.P.,Hallyburton, I.,Norval, S.,Scullion, P.,Stojanovski, L.,Simeons, F.R.,van Aalten, D.,Frearson, J.A.,Brenk, R.,Fairlamb, A.H.,Ferguson, M.A.,Wyatt, P.G.,Gilbert, I.H.,Read, K.D. Lead optimization of a pyrazole sulfonamide series of Trypanosoma brucei N-myristoyltransferase inhibitors: identification and evaluation of CNS penetrant compounds as potential treatments for stage 2 human African trypanosomiasis. J. Med. Chem. 2014 57 9855 9869 4NDS 25504801 Crystal structure of L. decastes alpha-galactosyl-binding lectin 2013-10-27 2014-12-10 van Eerde, A.,Grahn, E.M.,Winter, H.C.,Goldstein, I.J.,Krengel, U. Atomic-resolution structure of the alpha-galactosyl binding Lyophyllum decastes lectin reveals a new protein family found in both fungi and plants. Glycobiology 2015 25 492 501 4NDV 25504801 Crystal structure of L. decastes alpha-galactosyl-binding lectin in complex with globotriose 2013-10-27 2014-12-10 van Eerde, A.,Grahn, E.M.,Winter, H.C.,Goldstein, I.J.,Krengel, U. Atomic-resolution structure of the alpha-galactosyl binding Lyophyllum decastes lectin reveals a new protein family found in both fungi and plants. Glycobiology 2015 25 492 501 4UWN 25427784 Lysozyme soaked with a ruthenium based CORM with a methione oxide ligand (complex 6b) 2014-08-13 2014-12-10 Seixas, J.D.,Santos, M.F.A.,Mukhopadhyay, A.,Coelho, A.C.,Reis, P.M.,Veiros, L.F.,Marques, A.R.,Penacho, N.,Goncalves, A.M.L.,Romao, M.J.,Bernardes, G.J.L.,Santos-Silva, T.,Romao, C.C. A Contribution to the Rational Design of Ru(Co)3Cl2L Complexes for in Vivo Delivery of Co. Dalton Trans 2015 44 5058 0 4D0V 25486282 Crystal structure of the fiber head domain of the Atadenovirus snake adenovirus 1, native, I213 crystal form 2014-04-30 2014-12-17 Singh, A.K.,Menendez-Conejero, R.,San Martin, C.,van Raaij, M.J. Crystal structure of the fibre head domain of the Atadenovirus Snake Adenovirus 1. PLoS ONE 2014 9 0 0 4OOW 25053847 HCV NS5B polymerase with a fragment of quercetagetin 2014-02-04 2014-12-17 Ahmed-Belkacem, A.,Guichou, J.F.,Brillet, R.,Ahnou, N.,Hernandez, E.,Pallier, C.,Pawlotsky, J.M. Inhibition of RNA binding to hepatitis C virus RNA-dependent RNA polymerase: a new mechanism for antiviral intervention. Nucleic Acids Res. 2014 42 9399 9409 4QT7 25447263 Crystal structure of the c-Src SH3 domain in complex with a peptide from the Hepatitis C virus NS5A-protein 2014-07-07 2014-12-24 Bacarizo, J.,Martinez-Rodriguez, S.,Camara-Artigas, A. Structure of the c-Src-SH3 domain in complex with a proline-rich motif of NS5A protein from the hepatitis C virus. J.Struct.Biol. 2015 189 67 72 4RE6 25760596 Acylaminoacyl peptidase complexed with a chloromethylketone inhibitor 2014-09-22 2015-01-28 Menyhard, D.K.,Orgovan, Z.,Szeltner, Z.,Szamosi, I.,Harmat, V. Catalytically distinct states captured in a crystal lattice: the substrate-bound and scavenger states of acylaminoacyl peptidase and their implications for functionality. Acta Crystallogr.,Sect.D 2015 71 461 472 4WV6 25586196 Heterodimer of Importin alpha 1 with nuclear localization signal of TAF8 2014-11-04 2015-01-28 Trowitzsch, S.,Viola, C.,Scheer, E.,Conic, S.,Chavant, V.,Fournier, M.,Papai, G.,Ebong, I.O.,Schaffitzel, C.,Zou, J.,Haffke, M.,Rappsilber, J.,Robinson, C.V.,Schultz, P.,Tora, L.,Berger, I. Cytoplasmic TAF2-TAF8-TAF10 complex provides evidence for nuclear holo-TFIID assembly from preformed submodules. Nat Commun 2015 6 6011 6011 4OIF 24100561 3D structure of Gan42B, a GH42 beta-galactosidase from G. 2014-01-19 2015-02-04 Solomon, H.V.,Tabachnikov, O.,Feinberg, H.,Govada, L.,Chayen, N.E.,Shoham, Y.,Shoham, G. Crystallization and preliminary crystallographic analysis of GanB, a GH42 intracellular beta-galactosidase from Geobacillus stearothermophilus. Acta Crystallogr.,Sect.F 2013 69 1114 1119 4OIF 24100561 3D structure of Gan42B, a GH42 beta-galactosidase from G. 2014-01-19 2015-02-04 Solomon, H.V.,Tabachnikov, O.,Feinberg, H.,Govada, L.,Chayen, N.E.,Shoham, Y.,Shoham, G. Crystallization and preliminary crystallographic analysis of GanB, a GH42 intracellular beta-galactosidase from Geobacillus stearothermophilus. Acta Crystallogr.,Sect.F 2013 69 1114 1119 4V14 25737836 Structure and function analysis of MutT from the psychrofile fish pathogen Aliivibrio salmonicida and the mesophile Vibrio cholerae 2014-09-24 2015-02-04 Lian, K.,Leiros, H.K.,Moe, E. Mutt from the Fish Pathogen Aliivibrio Salmonicida is a Cold-Active Nucleotide-Pool Sanitization Enzyme with Unexpectedly High Thermostability. FEBS Open Bio 2015 5 107 0 4WXF 25611820 Crystal structure of L-Serine Hydroxymethyltransferase in complex with glycine 2014-11-13 2015-02-04 Hernandez, K.,Zelen, I.,Petrillo, G.,Uson, I.,Wandtke, C.M.,Bujons, J.,Joglar, J.,Parella, T.,Clapes, P. Engineered L-Serine Hydroxymethyltransferase from Streptococcus thermophilus for the Synthesis of alpha , alpha-Dialkyl-alpha-Amino Acids. Angew.Chem.Int.Ed.Engl. 2015 54 3013 3017 4U94 25619172 Structure of mycobacterial maltokinase, the missing link in the essential GlgE-pathway 2014-08-05 2015-02-11 Fraga, J.,Maranha, A.,Mendes, V.,Pereira, P.J.,Empadinhas, N.,Macedo-Ribeiro, S. Structure of mycobacterial maltokinase, the missing link in the essential GlgE-pathway. Sci Rep 2015 5 8026 8026 4NY7 Bond length analysis of the PqqC Y175F mutant structure shows evidence for bound PQQ in the reduced form 2013-12-10 2015-03-04 Fisher, S.J.,Puehringer, S. Bond length analysis of the PqqC Y175F mutant structure shows evidence for bound PQQ in the reduced form To be Published 0 0 0 0 4CSR High resolution crystal structure of the histone fold dimer (NF-YB)-(NF-YC) 2014-03-09 2015-03-18 Gnesutta, N.,Cocolo, S.,Mantovani, R.,Bolognesi, M.,Nardini, M. High Resolution Crystal Structure of the Histone Fold Dimer (NF-Yb)-(NF-Yc) To be Published 0 0 0 0 4P0G Crystal structure of MltF from Pseudomonas aeruginosa complexed with bulgecin and muropeptide 2014-02-21 2015-03-18 Redden, E.,Thunnissen, A.M.W.H. Crystal structure of MltF from Pseudomonas aeruginosa complexed with bulgecin and muropeptide To Be Published 0 0 0 0 4V12 25754266 Crystal structure of the MSMEG_6754 dehydratase from Mycobacterium smegmatis 2014-09-23 2015-03-18 Carrere-Kremer, S.,Blaise, M.,Singh, V.K.,Alibaud, L.,Tuaillon, E.,Halloum, I.,Van De Weerd, R.,Guerardel, Y.,Drancourt, M.,Takiff, H.,Geurtsen, J.,Kremer, L. A New Dehydratase Conferring Innate Resistance to Thiacetazone and Intra-Amoebal Survival of Mycobacterium Smegmatis. Mol.Microbiol. 2015 96 1085 0 4CVD 29184076 Crystal structure of the central repeat of cell wall binding module of Cpl7 2014-03-25 2015-04-08 Bustamante, N.,Iglesias-Bexiga, M.,Bernardo-Garcia, N.,Silva-Martin, N.,Garcia, G.,Campanero-Rhodes, M.A.,Garcia, E.,Uson, I.,Buey, R.M.,Garcia, P.,Hermoso, J.A.,Bruix, M.,Menendez, M. Deciphering how Cpl-7 cell wall-binding repeats recognize the bacterial peptidoglycan. Sci Rep 2017 7 16494 16494 4UZE 25801930 R66A mutant of FAD synthetase from Corynebacterium ammoniagenes 2014-09-05 2015-04-08 Serrano, A.,Sebastian, M.,Arilla-Luna, S.,Baquedano, S.,Pallares, M.C.,Lostao, A.,Herguedas, B.,Velazquez-Campoy, A.,Martinez-Julvez, M.,Medina, M. Quaternary Organization in a Bifunctional Prokaryotic Fad Synthetase: Involvement of an Arginine at its Adenylyltransferase Module on the Riboflavin Kinase Activity. Biochim.Biophys.Acta 2015 1854 897 0 4UZF 25801930 R66E mutant of FAD synthetase from Corynebacterium ammoniagenes 2014-09-05 2015-04-08 Serrano, A.,Sebastian, M.,Arilla-Luna, S.,Baquedano, S.,Pallares, M.C.,Lostao, A.,Herguedas, B.,Velazquez-Campoy, A.,Martinez-Julvez, M.,Medina, M. Quaternary Organization in a Bifunctional Prokaryotic Fad Synthetase: Involvement of an Arginine at its Adenylyltransferase Module on the Riboflavin Kinase Activity. Biochim.Biophys.Acta 2015 1854 897 0 4R7P 25860585 Human UDP-glucose pyrophosphorylase isoform 1 in complex with UDP-glucose 2014-08-28 2015-04-22 Fuhring, J.I.,Cramer, J.T.,Schneider, J.,Baruch, P.,Gerardy-Schahn, R.,Fedorov, R. A Quaternary Mechanism Enables the Complex Biological Functions of Octameric Human UDP-glucose Pyrophosphorylase, a Key Enzyme in Cell Metabolism. Sci Rep 0 5 9618 9618 4UZG 25942637 Crystal structure of group B streptococcus pilus 2b backbone protein SAK_1440 2014-09-05 2015-05-13 Cozzi, R.,Malito, E.,Lazzarin, M.,Nuccitelli, A.,Castagnetti, A.,Bottomley, M.J.,Margarit, I.,Maione, D.,Rinaudo, C.D. Structure and assembly of group B streptococcus pilus 2b backbone protein. PLoS ONE 2015 10 0 0 4UIA 25990761 Crystal structure of 3a in complex with tafCPB 2015-03-27 2015-06-03 Halland, N.,Bronstrup, M.,Czech, J.,Czechtizky, W.,Evers, A.,Follmann, M.,Kohlmann, M.,Schiell, M.,Kurz, M.,Schreuder, H.A.,Kallus, C. Novel Small Molecule Inhibitors of Activated Thrombin Activatable Fibrinolysis Inhibitor (Tafia) from Natural Product Anabaenopeptin. J.Med.Chem. 2015 58 4839 0 4UVN 26189030 Crystal structure of human tankyrase 2 in complex with 5-amino-3-(4- chlorophenyl)-1,2-dihydroisoquinolin-1-one 2014-08-07 2015-07-29 Paine, H.A.,Nathubhai, A.,Woon, E.C.Y.,Sunderland, P.T.,Wood, P.J.,Mahon, M.F.,Lloyd, M.D.,Thompson, A.S.,Haikarainen, T.,Narwal, M.,Lehtio, L.,Threadgill, M.D. Exploration of the Nicotinamide-Binding Site of the Tankyrases, Identifying 3-Arylisoquinolin-1-Ones as Potent and Selective Inhibitors in Vitro. Bioorg.Med.Chem. 2015 23 5891 0 4UVS 26189030 Crystal structure of human tankyrase 2 in complex with 5-amino-3- pentyl-1,2-dihydroisoquinolin-1-one 2014-08-08 2015-07-29 Paine, H.A.,Nathubhai, A.,Woon, E.C.Y.,Sunderland, P.T.,Wood, P.J.,Mahon, M.F.,Lloyd, M.D.,Thompson, A.S.,Haikarainen, T.,Narwal, M.,Lehtio, L.,Threadgill, M.D. Exploration of the Nicotinamide-Binding Site of the Tankyrases, Identifying 3-Arylisoquinolin-1-Ones as Potent and Selective Inhibitors in Vitro. Bioorg.Med.Chem. 2015 23 5891 0 4P3W Crystal structure of the human filamin A Ig-like domains 20-21 in complex with migfilin peptide 2014-03-10 2015-08-12 Seppala, J.,Pentikainen, U.,Ylanne, J. Crystal structure of the human filamin A Ig-like domains 20-21 in complex with migfilin peptide To Be Published 0 0 0 0 4WZV 26263024 Crystal structure of a hydroxamate based inhibitor EN140 in complex with the MMP-9 catalytic domain 2014-11-20 2015-08-26 Nuti, E.,Cantelmo, A.R.,Gallo, C.,Bruno, A.,Bassani, B.,Camodeca, C.,Tuccinardi, T.,Vera, L.,Orlandini, E.,Nencetti, S.,Stura, E.A.,Martinelli, A.,Dive, V.,Albini, A.,Rossello, A. N-O-Isopropyl Sulfonamido-Based Hydroxamates as Matrix Metalloproteinase Inhibitors: Hit Selection and in Vivo Antiangiogenic Activity. J.Med.Chem. 2015 58 7224 7240 4Z6V 26267790 Structure of H200Q variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-nitrocatechol at 1.37 Ang resolution 2015-04-06 2015-08-26 Kovaleva, E.G.,Rogers, M.S.,Lipscomb, J.D. Structural Basis for Substrate and Oxygen Activation in Homoprotocatechuate 2,3-Dioxygenase: Roles of Conserved Active Site Histidine 200. Biochemistry 2015 54 5329 5339 4PA5 26322858 Tgl - a bacterial spore coat transglutaminase - cystamine complex 2014-04-07 2015-09-30 Fernandes, C.G.,Placido, D.,Lousa, D.,Brito, J.A.,Isidro, A.,Soares, C.M.,Pohl, J.,Carrondo, M.A.,Archer, M.,Henriques, A.O. Structural and Functional Characterization of an Ancient Bacterial Transglutaminase Sheds Light on the Minimal Requirements for Protein Cross-Linking. Biochemistry 2015 54 5723 5734 5AMV 26420545 Structural insights into the loss of catalytic competence in pectate lyase at low pH 2015-09-02 2015-09-30 Ali, S.,Sondergaard, C.R.,Teixeira, S.,Pickersgill, R.W. Structural Insights Into the Loss of Catalytic Competence in Pectate Lyase Activity at Low Ph. FEBS Lett. 2015 589 3242 0 4RUP 25620699 Crystal structure of zVDR L337H mutant-Gemini72 complex 2014-11-21 2015-10-07 Huet, T.,Laverny, G.,Ciesielski, F.,Molnar, F.,Ramamoorthy, T.G.,Belorusova, A.Y.,Antony, P.,Potier, N.,Metzger, D.,Moras, D.,Rochel, N. A vitamin D receptor selectively activated by gemini analogs reveals ligand dependent and independent effects. Cell Rep 2015 10 516 526 5AG5 26395087 CRYSTAL STRUCTURE OF LEISHMANIA MAJOR N-MYRISTOYLTRANSFERASE (NMT) WITH BOUND MYRISTOYL-COA AND A THIAZOLIDINONE LIGAND 2015-01-29 2015-10-07 Spinks, D.,Smith, V.,Thompson, S.,Robinson, D.A.,Luksch, T.,Smith, A.,Torrie, L.S.,Mcelroy, S.,Stojanovski, L.,Norval, S.,Collie, I.T.,Hallyburton, I.,Rao, B.,Brand, S.,Brenk, R.,Frearson, J.A.,Read, K.D.,Wyatt, P.G.,Gilbert, I.H. Development of Small-Molecule Trypanosoma Brucei N-Myristoyltransferase Inhibitors: Discovery and Optimisation of a Novel Binding Mode. Chemmedchem 2015 10 1821 0 5AG7 26395087 CRYSTAL STRUCTURE OF LEISHMANIA MAJOR N-MYRISTOYLTRANSFERASE (NMT) WITH BOUND MYRISTOYL-COA AND A BENZOMORPHOLINE LIGAND 2015-01-29 2015-10-07 Spinks, D.,Smith, V.,Thompson, S.,Robinson, D.A.,Luksch, T.,Smith, A.,Torrie, L.S.,Mcelroy, S.,Stojanovski, L.,Norval, S.,Collie, I.T.,Hallyburton, I.,Rao, B.,Brand, S.,Brenk, R.,Frearson, J.A.,Read, K.D.,Wyatt, P.G.,Gilbert, I.H. Development of Small-Molecule Trypanosoma Brucei N-Myristoyltransferase Inhibitors: Discovery and Optimisation of a Novel Binding Mode. Chemmedchem 2015 10 1821 0 5CPX 26474293 Crystal structure of murine polyomavirus PTA strain VP1 in complex with the DSLNT glycan 2015-07-21 2015-10-28 Buch, M.H.,Liaci, A.M.,O'Hara, S.D.,Garcea, R.L.,Neu, U.,Stehle, T. Structural and Functional Analysis of Murine Polyomavirus Capsid Proteins Establish the Determinants of Ligand Recognition and Pathogenicity. Plos Pathog. 2015 11 0 0 4RPE Crystal Structure of Variant G186E from Pseudomonas Aeruginosa Lipoxygenase 2 at 1.60A (C2) 2014-10-30 2015-11-04 Carpena, X.,Garreta, A.,Herrero, L.,Fita, I. 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