PDB_ID PUBMED_CID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS CITATION TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 1E1Y 10924512 Flavopiridol inhibits glycogen phosphorylase by binding at the inhibitor site 2000-05-11 2000-05-17 Oikonomakos, N.G.,Schnier, J.B.,Zographos, S.E.,Skamnaki, V.T.,Tsitsanou, K.E.,Johnson, L.N. Flavopiridol Inhibits Glycogen Phosphorylase by Binding at the Inhibitor Site J.Biol.Chem. 2000 275 34566 0 1HA3 11278992 ELONGATION FACTOR TU IN COMPLEX WITH aurodox 2001-03-26 2001-05-15 Vogeley, L.,Palm, G.J.,Mesters, J.R.,Hilgenfeld, R. Conformational Change of Elongation Factor TU Induced by Antibiotic Binding: Crystal Structure of the Complex between EF-TU:Gdp and Aurodox J.Biol.Chem. 2001 276 17149 0 1H97 11399085 Trematode hemoglobin from Paramphistomum epiclitum 2001-03-02 2001-06-21 Pesce, A.,Dewilde, S.,Kiger, L.,Milani, M.,Ascenzi, P.,Marden, M.C.,Van, M.L.,Vanfleteren, J.,Moens, L.,Bolognesi, M. Very High Resolution Structure of a Trematode Hemoglobin Displaying a Tyrb10-Tyre7 Heme Distal Residue Pair and High Oxygen Affinity J.Mol.Biol. 2001 309 1153 0 1E6Z 11481469 CHITINASE B FROM SERRATIA MARCESCENS WILDTYPE IN COMPLEX WITH CATALYTIC INTERMEDIATE 2000-08-23 2001-06-22 Van Aalten, D.M.F.,Komander, D.,Synstad, B.,Gseidnes, S.,Peter, M.G.,Eijsink, V.G.H. Structural Insights Into the Catalytic Mechanism of a Family 18 Exo-Chitinase Proc.Natl.Acad.Sci.USA 2001 98 8979 0 1H53 11468363 Binding of Phosphate and Pyrophosphate ions at the active site of human Angiogenin as revealed by X-ray Crystallography 2001-05-18 2001-08-09 Leonidas, D.D.,Chavali, G.B.,Jardine, A.M.,Li, S.,Shapiro, R.,Acharya, K.R. Binding of Phosphate and Pyrophosphate Ions at the Active Site of Human Angiogenin as Revealed by X-Ray Crystallography Protein Sci. 2001 10 1669 0 1KV5 11997014 Structure of Trypanosoma brucei brucei TIM with the salt-bridge-forming residue Arg191 mutated to Ser 2002-01-25 2002-03-29 Kursula, I.,Partanen, S.,Lambeir, A.-M.,Wierenga, R.K. The importance of the conserved Arg191-Asp227 salt bridge of triosephosphate isomerase for folding, stability, and catalysis FEBS Lett. 2002 518 39 42 1L0Z 12198297 THE STRUCTURE OF PORCINE PANCREATIC ELASTASE COMPLEXED WITH XENON AND BROMIDE, CRYOPROTECTED WITH DRY PARAFFIN OIL 2002-02-14 2002-08-28 Panjikar, S.,Tucker, P.A. Xenon derivatization of halide-soaked protein crystals. Acta Crystallogr.,Sect.D 2002 58 1413 1420 1L1G 12198297 The Structure of Porcine Pancreatic Elastase Complexed with Xenon and Bromide, Cryoprotected with Glycerol 2002-02-16 2002-08-28 Panjikar, S.,Tucker, P.A. Xenon derivatization of halide-soaked protein crystals. Acta Crystallogr.,Sect.D 2002 58 1413 1420 1M5D 12215417 X-RAY STRUCTURE OF THE GLUR2 LIGAND BINDING CORE (S1S2J-Y702F) IN COMPLEX WITH Br-HIBO AT 1.73 A RESOLUTION 2002-07-09 2002-09-18 Hogner, A.,Kastrup, J.S.,Jin, R.,Liljefors, T.,Mayer, M.L.,Egebjerg, J.,Larsen, I.K.,Gouaux, E. Structural Basis for AMPA Receptor Activation and Ligand Selectivity: Crystal Structures of Five Agonist Complexes with the GluR2 Ligand-binding Core J.Mol.Biol. 2002 322 93 109 1H16 12163496 Pyruvate Formate-Lyase (E.coli) in complex with Pyruvate and CoA 2002-07-03 2002-11-01 Becker, A.,Kabsch, W. X-Ray Structure of Pyruvate Formate-Lyase in Complex with Pyruvate and Coa.How the Enzyme Uses the Cys-418 Thiyl Radical for Pyruvate Cleavage J.Biol.Chem. 2002 277 40036 0 1K9T Chitinase a complexed with tetra-N-acetylchitotriose 2001-10-30 2002-11-06 Prag, G.,Tucker, P.A.,Oppenheim, A.B. Complex Structures of Chitinase A Mutant with Oligonag Provide Insight Into the Enzymatic Mechanism To be Published 0 0 0 0 1O1H STRUCTURE OF GLUCOSE ISOMERASE DERIVATIZED WITH KR. 2002-11-07 2002-11-27 Nowak, E.,Panjikar, S.,Tucker, P.A. Structure of Glucose Isomerase Derivatized with Kr. To be Published 0 0 0 0 1IZI 12460574 Inhibitor of HIV protease with unusual binding mode potently inhibiting multi-resistant protease mutants 2002-10-02 2002-12-23 Weber, J.,Mesters, J.R.,Lepsik, M.,Prejdova, J.,Svec, M.,Sponarova, J.,Mlcochova, P.,Skalicka, K.,Strisovsky, K.,Uhlikova, T.,Soucek, M.,Machala, L.,Stankova, M.,Vondrasek, J.,Klimkait, T.,Kraeusslich, H.-G.,Hilgenfeld, R.,Konvalinka, J. Unusual Binding Mode of an HIV-1 Protease Inhibitor Explains its Potency against Multi-drug-resistant Virus Strains J.MOL.BIOL. 2002 324 739 754 1LS9 12475218 Structure of the Cytochrome c6 from the Green Alga Cladophora glomerata 2002-05-17 2002-12-25 Dikiy, A.,Carpentier, W.,Vandenberghe, I.,Borsari, M.,Safarov, N.,Dikaya, E.,Van Beeumen, J.,Ciurli, S. Structural Basis for the Molecular Properties of Cytochrome C(6) Biochemistry 2002 41 14689 14699 1NI0 Structure of the Y94F mutant of the restriction endonuclease PvuII 2002-12-20 2003-02-04 Tucker, P.A.,Kokkinidis, M.,Nicolaki, S.,Kotsifaki, D. Structure of the Y94F mutant of the restriction endonuclease PvuII To be Published 0 0 0 0 1HK1 12743361 HUMAN SERUM ALBUMIN COMPLEXED WITH THYROXINE (3,3',5,5'-TETRAIODO-L-THYRONINE) 2003-03-05 2003-05-16 Petitpas, I.,Petersen, C.E.,Ha, C.E.,Bhattacharya, A.A.,Zunszain, P.A.,Ghuman, J.,Bhagavan, N.V.,Curry, S. Structural Basis of Albumin-Thyroxine Interactions and Familial Dysalbuminemic Hyperthyroxinemia Proc.Natl.Acad.Sci.USA 2003 100 6440 0 1HK2 12743361 HUMAN SERUM ALBUMIN MUTANT R218H COMPLEXED WITH THYROXINE (3,3',5,5'-TETRAIODO-L-THYRONINE) 2003-03-05 2003-05-16 Petitpas, I.,Petersen, C.E.,Ha, C.E.,Bhattacharya, A.A.,Zunszain, P.A.,Ghuman, J.,Bhagavan, N.V.,Curry, S. Structural Basis of Albumin-Thyroxine Interactions and Familial Dysalbuminemic Hyperthyroxinemia Proc.Natl.Acad.Sci.USA 2003 100 6440 0 1P9U 12746549 Coronavirus Main Proteinase (3CLpro) Structure: Basis for Design of anti-SARS Drugs 2003-05-12 2003-05-20 Anand, K.,Ziebuhr, J.,Wadhwani, P.,Mesters, J.R.,Hilgenfeld, R. Coronavirus Main Proteinase (3CLpro) Structure: Basis for Design of anti-SARS Drugs Science 2003 300 1763 1767 1O9W 12864853 F17-aG lectin domain from Escherichia coli in complex with N-acetyl-glucosamine 2002-12-20 2003-05-29 Buts, L.,Bouckaert, J.,De Genst, E.,Loris, R.,Oscarson, S.,Lahmann, M.,Messens, J.,Brosens, E.,Wyns, L.,De Greve, H. The Fimbrial Adhesin F17-G of Enterotoxigenic Escherichia Coli Has an Immunoglobulin-Like Lectin Domain that Binds N-Acetylglucosamine Mol.Microbiol. 2003 49 705 0 1NAV 12699376 Thyroid Receptor Alpha in complex with an agonist selective for Thyroid Receptor Beta1 2002-11-29 2003-06-17 Ye, L.,Li, Y.L.,Mellstrom, K.,Mellin, C.,Bladh, L.G.,Koehler, K.,Garg, N.,Garcia Collazo, A.M.,Litten, C.,Husman, B.,Persson, K.,Ljunggren, J.,Grover, G.,Sleph, P.G.,George, R.,Malm, J. Thyroid receptor ligands. 1. Agonist ligands selective for the thyroid receptor beta1. J.Med.Chem. 2003 46 1580 1588 1OJX 12941964 Crystal structure of an Archaeal fructose 1,6-bisphosphate aldolase 2003-07-16 2003-09-04 Lorentzen, E.,Pohl, E.,Zwart, P.,Stark, A.,Russell, R.B.,Knura, T.,Hensel, R.,Siebers, B. Crystal structure of an archaeal class I aldolase and the evolution of (betaalpha)8 barrel proteins. J. Biol. Chem. 2003 278 47253 47260 1MQR 14573597 THE CRYSTAL STRUCTURE OF ALPHA-D-GLUCURONIDASE (E386Q) FROM BACILLUS STEAROTHERMOPHILUS T-6 2002-09-17 2003-09-17 Golan, G.,Shallom, D.,Teplitsky, A.,Zaide, G.,Shulami, S.,Baasov, T.,Stojanoff, V.,Thompson, A.,Shoham, Y.,Shoham, G. Crystal Structures of Geobacillus stearothermophilus {alpha}-Glucuronidase Complexed with Its Substrate and Products: MECHANISTIC IMPLICATIONS. J.Biol.Chem. 2004 279 3014 3024 1MQP 14573597 THE CRYSTAL STRUCTURE OF ALPHA-D-GLUCURONIDASE FROM BACILLUS STEAROTHERMOPHILUS T-6 2002-09-17 2003-09-23 Golan, G.,Shallom, D.,Teplitsky, A.,Zaide, G.,Shulami, S.,Baasov, T.,Stojanoff, V.,Thompson, A.,Shoham, Y.,Shoham, G. Crystal structures of Geobacillus stearothermophilus alpha-glucuronidase complexed with its substrate and products: mechanistic implications. J.Biol.Chem. 2004 279 3014 3024 1PQ8 12937176 Trypsin at pH 4 at atomic resolution 2003-06-18 2003-11-11 Schmidt, A.,Jelsch, C.,Ostergaard, P.,Rypniewski, W.,Lamzin, V.S. Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS. J.Biol.Chem. 2003 278 43357 43362 1OKT 14623980 X-ray Structure of Glutathione S-Transferase from the Malarial Parasite Plasmodium falciparum 2003-07-29 2003-11-20 Fritz-Wolf, K.,Becker, A.,Rahlfs, S.,Harwaldt, P.,Schirmer, R.H.,Kabsch, W.,Becker, K. X-Ray Structure of Glutathione S-Transferase from the Malarial Parasite Plasmodium Falciparum Proc.Natl.Acad.Sci.USA 2003 100 13821 0 1OKH 14646070 Viscotoxin A3 from Viscum album L. 2003-07-24 2003-12-04 Debreczeni, J.E.,Girmann, B.,Zeeck, A.,Kratzner, R.,Sheldrick, G.M. Structure of Viscotoxin A3: Disulfide Location from Weak Sad Data Acta Crystallogr.,Sect.D 2003 59 2125 0 1P0X 14653735 F393Y mutant heme domain of flavocytochrome P450 BM3 2003-04-11 2003-12-09 Ost, T.W.B.,Clark, J.,Mowat, C.G.,Miles, C.S.,Walkinshaw, M.D.,Reid, G.A.,Chapman, S.K.,Daff, S. Oxygen Activation and Electron Transfer in Flavocytochrome P450 BM3 J.Am.Chem.Soc. 2003 125 15010 15020 1OF2 14734527 Crystal structure of HLA-B*2709 complexed with the vasoactive intestinal peptide type 1 receptor (VIPR) peptide (residues 400-408) 2003-04-04 2004-01-29 Hulsmeyer, M.,Fiorillo, M.T.,Bettosini, F.,Sorrentino, R.,Saenger, W.,Ziegler, A.,Uchanska-Ziegler, B. Dual, Hla-B27 Subtype-Dependent Conformation of a Self-Peptide J.Exp.Med. 2004 199 271 0 1UU1 15007066 Complex of Histidinol-phosphate aminotransferase (HisC) from Thermotoga maritima (Apo-form) 2003-12-12 2004-03-18 Fernandez, F.J.,Vega, M.C.,Lehmann, F.,Sandmeier, E.,Gehring, H.,Christen, P.,Wilmanns, M. Structural Studies of the Catalytic Reaction Pathway of a Hyperthermophilic Histidinol-Phosphate Aminotransferase J.Biol.Chem. 2004 279 21478 0 1UU2 15007066 Histidinol-phosphate aminotransferase (HisC) from Thermotoga maritima (apo-form) 2003-12-13 2004-03-18 Fernandez, F.J.,Vega, M.C.,Lehmann, F.,Sandmeier, E.,Gehring, H.,Christen, P.,Wilmanns, M. Structural Studies of the Catalytic Reaction Pathway of a Hyperthermophilic Histidinol-Phosphate Aminotransferase J.Biol.Chem. 2004 279 21478 0 1QZ3 14617621 CRYSTAL STRUCTURE OF MUTANT M211S/R215L OF CARBOXYLESTERASE EST2 COMPLEXED WITH HEXADECANESULFONATE 2003-09-15 2004-03-23 De Simone, G.,Mandrich, L.,Menchise, V.,Giordano, V.,Febbraio, F.,Rossi, M.,Pedone, C.,Manco, G. A substrate-induced switch in the reaction mechanism of a thermophilic esterase: kinetic evidences and structural basis. J.Biol.Chem. 2004 279 6815 6823 1OOT Crystal structure of the SH3 domain from a S. cerevisiae hypothetical 40.4 kDa protein at 1.39 A resolution 2003-03-04 2004-04-06 Kursula, P.,Lehmann, F.,Song, Y.H.,Wilmanns, M. Crystal structure of the SH3 domain from a S. cerevisiae hypothetical 40.4 kDa protein at 1.39 A resolution To be Published 0 0 0 0 1S3T 15038715 BORATE INHIBITED BACILLUS PASTEURII UREASE CRYSTAL STRUCTURE 2004-01-14 2004-04-06 Benini, S.,Rypniewski, W.R.,Wilson, K.S.,Mangani, S.,Ciurli, S. Molecular Details of Urease Inhibition by Boric Acid: Insights into the Catalytic Mechanism. J.Am.Chem.Soc. 2004 126 3714 3715 1PN4 15051722 Crystal structure of 2-enoyl-CoA hydratase 2 domain of Candida tropicalis multifunctional enzyme type 2 complexed with (3R)-hydroxydecanoyl-CoA. 2003-06-12 2004-04-13 Koski, M.K.,Haapalainen, A.M.,Hiltunen, J.K.,Glumoff, T. A Two-domain Structure of One Subunit Explains Unique Features of Eukaryotic Hydratase 2. J.Biol.Chem. 2004 279 24666 24672 1OFQ 15019786 CRYSTAL STRUCTURE OF THE TYROSINE-REGULATED 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH MANGANESE(II) 2003-04-17 2004-04-15 Koenig, V.,Pfeil, A.,Braus, G.H.,Schneider, T.R. Substrate and Metal Complexes of 3-Deoxy-D-Arabino-Heptulosonate-7-Phosphate Synthase from Saccharomyces Cerevisiae Provide New Insights Into the Catalytic Mechanism J.Mol.Biol. 2004 337 675 0 1P4G Crystal structure of glycogen phosphorylase b in complex with C-(1-azido-alpha-D-glucopyranosyl)formamide 2003-04-23 2004-05-18 Chrysina, E.D.,Oikonomakos, N.G.,Zographos, S.E.,Kosmopoulou, M.N.,Bischler, N.,Leonidas, D.D.,Kovacs, L.,Docsa, T.,Gergely, P.,Somsak, L. Crsytallographic Studies on alpha- and beta-D-glucopyranosyl Formamide Analogues, Inhibitors of Glycogen Phosphorylase Biocatal.Biotransfor. 2003 21 233 242 1P4H Crystal structure of glycogen phosphorylase b in complex with C-(1-acetamido-alpha-D-glucopyranosyl) formamide 2003-04-23 2004-05-18 Chrysina, E.D.,Oikonomakos, N.G.,Zographos, S.E.,Kosmopoulou, M.N.,Bischler, N.,Leonidas, D.D.,Kovacs, L.,Docsa, T.,Gergely, P.,Somsak, L. Crsytallographic Studies on alpha- and beta-D-glucopyranosyl Formamide Analogues, Inhibitors of Glycogen Phosphorylase Biocatal.Biotransfor. 2003 21 233 242 1P4J Crystal structure of glycogen phosphorylase b in complex with C-(1-hydroxy-beta-D-glucopyranosyl)formamide 2003-04-23 2004-05-18 Chrysina, E.D.,Oikonomakos, N.G.,Zographos, S.E.,Kosmopoulou, M.N.,Bischler, N.,Leonidas, D.D.,Kovacs, L.,Docsa, T.,Gergely, P.,Somsak, L. Crsytallographic Studies on alpha- and beta-D-glucopyranosyl Formamide Analogues, Inhibitors of Glycogen Phosphorylase Biocatal.Biotransfor. 2003 21 233 242 1UTY 15155766 Crystal structure of the RNA binding domain of Bluetongue virus non-structural protein 2(NS2) 2003-12-12 2004-07-13 Butan, C.,Van Der Zandt, H.,Tucker, P. Structure and Assembly of the RNA Binding Domain of Bluetongue Virus Non-Structural Protein 2 J.Biol.Chem. 2004 279 37613 0 1V48 15272165 Calf spleen purine nucleoside phosphorylase (PNP) binary complex with 9-(5,5-difluoro-5-phosphonopenthyl)guanine 2003-11-11 2004-08-03 Luic, M.,Koellner, G.,Yokomatsu, T.,Shibuya, S.,Bzowska, A. Calf spleen purine-nucleoside phosphorylase: crystal structure of the binary complex with a potent multisubstrate analogue inhibitor. Acta Crystallogr.,Sect.D 2004 60 1417 1424 1UNO 15502304 Crystal structure of a d,l-alternating peptide 2003-09-11 2004-09-24 Alexopoulos, E.,Kuesel, A.,Sheldrick, G.M.,Diederichsen, U.,Uson, I. Solution and Structure of an Alternating D,L-Peptide Acta Crystallogr.,Sect.D 2004 60 1971 0 1UR0 15312766 The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. 2003-10-24 2004-10-20 Ryttersgaard, C.,Le Nours, J.,Lo Leggio, L.,Jorgensen, C.T.,Christensen, L.L.H.,Bjornvad, M.,Larsen, S. The Structure of Endo-Beta-1,4-Galactanase from Bacillus Licheniformis in Complex with Two Oligosaccharide Products J.Mol.Biol. 2004 341 107 0 1UR4 15312766 The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. 2003-10-24 2004-10-20 Ryttersgaard, C.,Le Nours, J.,Lo Leggio, L.,Jorgensen, C.T.,Christensen, L.L.H.,Bjornvad, M.,Larsen, S. The Structure of Endo-Beta-1,4-Galactanase from Bacillus Licheniformis in Complex with Two Oligosaccharide Products J.Mol.Biol. 2004 341 107 0 1W0I 15527780 Arabidopsis thaliana Mitochondrial KAS 2004-06-04 2004-11-10 Olsen, J.G.,Rasmussen, A.V.,von Wettstein-Knowles, P.,Henriksen, A. Structure of the mitochondrial beta-ketoacyl-[acyl carrier protein] synthase from Arabidopsis and its role in fatty acid synthesis. FEBS Lett. 2004 577 170 174 1V05 15642266 Dimerization of human Filamin C: crystal structure of the domain 24 2004-03-22 2004-11-17 Pudas, R.,Kiema, T.-R.,Butler, P.J.G.,Stewart, M.,Ylanne, J. Structural Basis for Vertebrate Filamin Dimerization Structure 2005 13 111 0 1RZO Agglutinin from Ricinus communis with galactoaza 2003-12-26 2004-12-28 Gabdoulkhakov, A.G.,Savochkina, Y.,Konareva, N.,Krauspenhaar, R.,Stoeva, S.,Nikonov, S.V.,Voelter, W.,Betzel, C.,Mikhailov, A.M. Structure-function investigation complex of Agglutinin from Ricinus communis with galactoaza To be Published 0 0 0 0 1SG4 15351645 Crystal structure of human mitochondrial delta3-delta2-enoyl-CoA isomerase 2004-02-23 2005-01-18 Partanen, S.T.,Novikov, D.K.,Popov, A.N.,Mursula, A.M.,Hiltunen, J.K.,Wierenga, R.K. The 1.3 A crystal structure of human mitochondrial Delta3-Delta2-enoyl-CoA isomerase shows a novel mode of binding for the fatty acyl group. J.Mol.Biol. 2004 342 1197 1208 1SG4 15351645 Crystal structure of human mitochondrial delta3-delta2-enoyl-CoA isomerase 2004-02-23 2005-01-18 Partanen, S.T.,Novikov, D.K.,Popov, A.N.,Mursula, A.M.,Hiltunen, J.K.,Wierenga, R.K. The 1.3 A crystal structure of human mitochondrial Delta3-Delta2-enoyl-CoA isomerase shows a novel mode of binding for the fatty acyl group. J.Mol.Biol. 2004 342 1197 1208 1S9C 15644212 Crystal structure analysis of the 2-enoyl-CoA hydratase 2 domain of human peroxisomal multifunctional enzyme type 2 2004-02-04 2005-02-15 Koski, M.K.,Haapalainen, A.M.,Hiltunen, J.K. Crystal structure of 2-enoyl-CoA hydratase 2 from human peroxisomal multifunctional enzyme type 2. J.Mol.Biol. 2005 345 1157 1169 1WL5 15733928 Human cytosolic acetoacetyl-CoA thiolase 2004-06-20 2005-03-01 Kursula, P.,Sikkila, H.,Fukao, T.,Kondo, N.,Wierenga, R.K. High Resolution Crystal Structures of Human Cytosolic Thiolase (CT): A Comparison of the Active Sites of Human CT, Bacterial Thiolase, and Bacterial KAS I J.Mol.Biol. 2005 347 189 201 1SJ9 16511035 Crystal structure of the uridine phosphorylase from Salmonella typhimurium at 2.5A resolution 2004-03-03 2005-03-08 Dontsova, M.V.,Gabdoulkhakov, A.G.,Molchan, O.K.,Lashkov, A.A.,Garber, M.B.,Mironov, A.S.,Zhukhlistova, N.E.,Morgunova, E.Y.,Voelter, W.,Betzel, C.,Zhang, Y.,Ealick, S.E.,Mikhailov, A.M. Preliminary investigation of the three-dimensional structure of Salmonella typhimurium uridine phosphorylase in the crystalline state. Acta Crystallogr.,Sect.F 2005 61 337 340 2BHE 15742375 HUMAN CYCLIN DEPENDENT PROTEIN KINASE 2 IN COMPLEX WITH THE INHIBITOR 5-BROMO-INDIRUBINE 2005-01-10 2005-03-09 Schaefer, M.,Jautelat, R.,Brumby, T.,Briem, H.,Eisenbrand, G.,Schwahn, S.,Krueger, M.,Luecking, U.,Prien, O.,Siemeister, G. From the Insoluble Dye Indirubin Towards Highly Active, Soluble Cdk2-Inhibitors Chembiochem 2005 6 531 0 1XKX 15741340 Kinetic and crystallographic studies on 2-(beta-D-glucopyranosyl)-5-methyl-1,3,4-oxadiazole,-benzothiazole, and-benzimidazole, inhibitors of muscle glycogen phosphorylase b. Evidence for a new binding site. 2004-09-30 2005-03-15 Chrysina, E.D.,Kosmopoulou, M.N.,Tiraidis, C.,Kardakaris, R.,Bischler, N.,Leonidas, D.D.,Hadady, Z.,Somsak, L.,Docsa, T.,Gergely, P.,Oikonomakos, N.G. Kinetic and crystallographic studies on 2-(beta-D-glucopyranosyl)-5-methyl-1, 3, 4-oxadiazole, -benzothiazole, and -benzimidazole, inhibitors of muscle glycogen phosphorylase b. Evidence for a new binding site Protein Sci. 2005 14 873 888 1XL0 15741340 Kinetic and crystallographic studies on 2-(beta-D-glucopyranosyl)-5-methyl-1,3,4-oxadiazole,-benzothiazole, and-benzimidazole, inhibitors of muscle glycogen phosphorylase b. Evidence for a new binding site. 2004-09-30 2005-03-15 Chrysina, E.D.,Kosmopoulou, M.N.,Tiraidis, C.,Kardakaris, R.,Bischler, N.,Leonidas, D.D.,Hadady, Z.,Somsak, L.,Docsa, T.,Gergely, P.,Oikonomakos, N.G. Kinetic and crystallographic studies on 2-(beta-D-glucopyranosyl)-5-methyl-1, 3, 4-oxadiazole, -benzothiazole, and -benzimidazole, inhibitors of muscle glycogen phosphorylase b. Evidence for a new binding site Protein Sci. 2005 14 873 888 1XL1 15741340 Kinetic and crystallographic studies on 2-(beta-D-glucopyranosyl)-5-methyl-1,3,4-oxadiazole,-benzothiazole, and-benzimidazole, inhibitors of muscle glycogen phosphorylase b. Evidence for a new binding site. 2004-09-30 2005-03-15 Chrysina, E.D.,Kosmopoulou, M.N.,Tiraidis, C.,Kardakaris, R.,Bischler, N.,Leonidas, D.D.,Hadady, Z.,Somsak, L.,Docsa, T.,Gergely, P.,Oikonomakos, N.G. Kinetic and crystallographic studies on 2-(beta-D-glucopyranosyl)-5-methyl-1, 3, 4-oxadiazole, -benzothiazole, and -benzimidazole, inhibitors of muscle glycogen phosphorylase b. Evidence for a new binding site Protein Sci. 2005 14 873 888 1Y9D 15794646 Pyruvate Oxidase variant V265A from Lactobacillus plantarum 2004-12-15 2005-04-05 Wille, G.,Ritter, M.,Weiss, M.S.,Konig, S.,Mantele, W.,Hubner, G. The role of Val-265 for Flavin Adenine Dinulceotide (FAD) binding in pyruvate oxidase: FTIR, kinetic and crystallographic studies on the enzyme variant V265A Biochemistry 2005 44 5086 5094 1RL8 Crystal structure of the complex of resistant strain of hiv-1 protease(v82a mutant) with ritonavir 2003-11-25 2005-04-19 Rezacova, P.,Brynda, J.,Sedlacek, J.,Konvalinka, J.,Fabry, M.,Horejsi, M. Crystal structure of the complex of resistant strain of hiv-1 protease(v82a mutant) with ritonavir To be Published 2005 0 0 0 2BGD 15863305 Structure-based design of Protein Tyrosine Phosphatase-1B Inhibitors 2004-12-21 2005-05-04 Black, E.,Breed, J.,Breeze, A.L.,Embrey, K.,Garcia, R.,Gero, T.W.,Godfrey, L.,Kenny, P.W.,Morley, A.D.,Minshull, C.A.,Pannifer, A.D.,Read, J.,Rees, A.,Russell, D.J.,Toader, D.,Tucker, J. Structure-Based Design of Protein Tyrosine Phosphatase-1B Inhibitors Bioorg.Med.Chem.Lett. 2005 15 2503 0 1XWR 16061804 Crystal structure of the coliphage lambda transcription activator protein CII 2004-11-02 2005-06-21 Datta, A.B.,Panjikar, S.,Weiss, M.S.,Chakrabarti, P.,Parrack, P. Structure of {lambda} CII: Implications for recognition of direct-repeat DNA by an unusual tetrameric organization Proc.Natl.Acad.Sci.USA 2005 102 11242 11247 1VYO 17052607 Crystal structure of avidin 2004-05-03 2005-07-20 Repo, S.,Paldanius, T.A.,Hytonen, V.P.,Nyholm, T.K.,Halling, K.K.,Huuskonen, J.,Pentikainen, O.T.,Rissanen, K.,Slotte, J.P.,Airenne, T.T.,Salminen, T.A.,Kulomaa, M.S.,Johnson, M.S. Binding Properties of Haba-Type Azo Derivatives to Avidin and Avidin-Related Protein 4. Chem.Biol. 2006 13 1029 0 1XVM 16041079 Trypsin from Fusarium oxysporum- room temperature to atomic resolution 2004-10-28 2005-07-26 Schmidt, A.,Lamzin, V.S. Extraction of functional motion in trypsin crystal structures. 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J.Mol.Biol. 2005 354 25 0 1OB5 16257965 T. aquaticus elongation factor EF-Tu complexed with the antibiotic enacyloxin IIa, a GTP analog, and Phe-tRNA 2003-01-24 2005-10-13 Parmeggiani, A.,Krab, I.M.,Watanabe, T.,Nielsen, R.C.,Dahlberg, C.,Nyborg, J.,Nissen, P. Enacyloxin Iia Pinpoints a Binding Pocket of Elongation Factor TU for Development of Novel Antibiotics. J.Biol.Chem. 2006 281 2893 0 1SYX 17467737 The crystal structure of a binary U5 snRNP complex 2004-04-02 2005-10-18 Nielsen, T.K.,Liu, S.,Luhrmann, R.,Ficner, R. Structural basis for the bifunctionality of the U5 snRNP 52K protein (CD2BP2). J.Mol.Biol. 2007 369 902 908 1ZCH 16229462 Structure of the hypothetical oxidoreductase YcnD from Bacillus subtilis 2005-04-12 2005-11-01 Morokutti, A.,Lyskowski, A.,Sollner, S.,Pointner, E.,Fitzpatrick, T.B.,Kratky, C.,Gruber, K.,Macheroux, P. Structure and Function of YcnD from Bacillus subtilis, a Flavin-Containing Oxidoreductase(,). Biochemistry 2005 44 13724 13733 1ZTZ 16227435 Crystal structure of HIV protease- metallacarborane complex 2005-05-28 2005-11-01 Cigler, P.,Kozisek, M.,Rezacova, P.,Brynda, J.,Otwinowski, Z.,Pokorna, J.,Plesek, J.,Gruner, B.,Doleckova-Maresova, L.,Masa, M.,Sedlacek, J.,Bodem, J.,Kraeusslich, H.-G.,Kral, V.,Konvalinka, J. From nonpeptide toward noncarbon protease inhibitors: Metallacarboranes as specific and potent inhibitors of HIV protease Proc.Natl.Acad.Sci.USA 2005 102 15394 15399 1Y1Q Crystal Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with Uridine-5p-monophosphate and Sulfate Ion at 2.35A Resolution 2004-11-19 2005-11-22 Gabdoulkhakov, A.G.,Dontsova, M.V.,Kachalova, G.S.,Betzel, C.,Ealick, S.E.,Mikhailov, A.M. Crystal Structures of Salmonella Typhimurium Uridine Phosphorylase in Native and Three Complexes Forms - with Uridine, Uracil and Sulfate. To be Published 0 0 0 0 2D6B 16929100 Novel Bromate Species trapped within a Protein Crystal 2005-11-10 2005-11-29 Ondracek, J.,Mesters, J.R. An ensemble of crystallographic models enables the description of novel bromate-oxoanion species trapped within a protein crystal Acta Crystallogr.,Sect.D 2006 62 996 1001 2C7Q 16340006 HhaI DNA methyltransferase complex with oligonucleotide containing 2- aminopurine outside the recognition sequence (paired with G) and SAH 2005-11-27 2005-12-14 Neely, R.K.,Daujotyte, D.,Grazulis, S.,Magennis, S.W.,Dryden, D.T.F.,Klimasauskas, S.,Jones, A.C. Time-Resolved Fluorescence of 2-Aminopurine as a Probe of Base Flipping in M.HhaI-DNA Complexes Nucleic Acids Res. 2005 33 6953 0 1XJG 15475969 Structural mechanism of allosteric substrate specificity in a ribonucleotide reductase: dATP-UDP complex 2004-09-23 2005-12-20 Larsson, K.-M.,Jordan, A.,Eliasson, R.,Reichard, P.,Logan, D.T.,Nordlund, P. 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The structure of dihydrodipicolinate reductase (DapB) from Mycobacterium tuberculosis in three crystal forms. Acta Crystallogr.,Sect.D 2010 66 61 72 2BKF 16376336 Structure of the PB1 domain of NBR1 2005-02-16 2006-01-18 Mueller, S.,Kursula, I.,Zou, P.,Wilmanns, M. Crystal Structure of the Pb1 Domain of Nbr1 FEBS Lett. 2006 580 341 0 2C1P 16427081 Fab-fragment of enantioselective antibody complexed with finrozole 2005-09-19 2006-01-25 Parkkinen, T.,Nevanen, T.K.,Koivula, A.,Rouvinen, J. Crystal Structures of an Enantioselective Fab-Fragment in Free and Complex Forms. J.Mol.Biol. 2006 357 471 0 1WMK Human death-associated kinase DRP-1, mutant S308D d40 2004-07-11 2006-01-31 Kursula, P.,Shani, G.,Kimchi, A.,Wilmanns, M. Structure of the inhibited conformation of DRP-1 kinase To be Published 0 0 0 0 1YS6 Crystal structure of the response regulatory protein PrrA from Mycobacterium Tuberculosis 2005-02-07 2006-02-07 Nowak, E.,Panjikar, S.,Tucker, P. 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Structure 2006 14 173 183 1ZMW 16472737 Catalytic and ubiqutin-associated domains of MARK2/PAR-1: T208A/S212A inactive double mutant 2005-05-11 2006-02-14 Panneerselvam, S.,Marx, A.,Mandelkow, E.M.,Mandelkow, E. Structure of the catalytic and ubiquitin-associated domains of the protein kinase MARK/Par-1. Structure 2006 14 173 183 2C6G 16467855 Membrane-bound glutamate carboxypeptidase II (GCPII) with bound glutamate 2005-11-09 2006-02-15 Mesters, J.R.,Barinka, C.,Li, W.,Tsukamoto, T.,Majer, P.,Slusher, B.S.,Konvalinka, J.,Hilgenfeld, R. Structure of glutamate carboxypeptidase II, a drug target in neuronal damage and prostate cancer. EMBO J. 2006 25 1375 1384 2C6P 16467855 Membrane-bound glutamate carboxypeptidase II (GCPII) in complex with phosphate anion 2005-11-11 2006-02-15 Mesters, J.R.,Barinka, C.,Li, W.,Tsukamoto, T.,Majer, P.,Slusher, B.S.,Konvalinka, J.,Hilgenfeld, R. Structure of Glutamate Carboxypeptidase II, a Drug Target in Neuronal Damage and Prostate Cancer. Embo J. 2006 25 1375 0 2FYI 17010379 Crystal Structure of the Cofactor-Binding Domain of the Cbl Transcriptional Regulator 2006-02-08 2006-02-21 Stec, E.,Witkowska-Zimny, M.,Hryniewicz, M.M.,Neumann, P.,Wilkinson, A.J.,Brzozowski, A.M.,Verma, C.S.,Zaim, J.,Wysocki, S.,D Bujacz, G. Structural Basis of the Sulphate Starvation Response in E. coli: Crystal Structure and Mutational Analysis of the Cofactor-binding Domain of the Cbl Transcriptional Regulator. J.Mol.Biol. 2006 364 309 322 1WRZ Calmodulin complexed with a peptide from a human death-associated protein kinase 2004-10-29 2006-03-21 Kursula, P.,Vahokoski, J.,Wilmanns, M. The mode of binding of calmodulin to death-associated protein kinases To be Published 0 0 0 0 2FBB 16552135 Crystal Structure Analysis of Hexagonal Lysozyme 2005-12-09 2006-03-28 Brinkmann, C.,Weiss, M.S.,Weckert, E. The structure of the hexagonal crystal form of hen egg-white lysozyme. Acta Crystallogr.,Sect.D 2006 62 349 355 1ZEA 17712773 Structure of the anti-cholera toxin antibody Fab fragment TE33 in complex with a D-peptide 2005-04-18 2006-04-04 Scheerer, P.,Kramer, A.,Otte, L.,Seifert, M.,Wessner, H.,Scholz, C.,Krauss, N.,Schneider-Mergener, J.,Hohne, W. Structure of an anti-cholera toxin antibody Fab in complex with an epitope-derived D-peptide: a case of polyspecific recognition. J.Mol.Recognit. 2007 20 263 274 2EXK 16631196 Structure of the family43 beta-Xylosidase E187G from geobacillus stearothermophilus in complex with xylobiose 2005-11-08 2006-04-04 Brux, C.,Ben-David, A.,Shallom-Shezifi, D.,Leon, M.,Niefind, K.,Shoham, G.,Shoham, Y.,Schomburg, D. The Structure of an Inverting GH43 beta-Xylosidase from Geobacillus stearothermophilus with its Substrate Reveals the Role of the Three Catalytic Residues. J.Mol.Biol. 2006 359 97 109 2EZ4 16680160 Pyruvate oxidase variant F479W 2005-11-10 2006-04-25 Wille, G.,Meyer, D.,Steinmetz, A.,Hinze, E.,Golbik, R.,Tittmann, K. The catalytic cycle of a thiamin diphosphate enzyme examined by cryocrystallography. Nat.Chem.Biol. 2006 2 324 328 2CG2 16684886 Crystal structure of SdsA1, an alkylsulfatase from Pseudomonas aeruginosa, in complex with sulfate 2006-02-27 2006-04-26 Hagelueken, G.,Adams, T.M.,Wiehlmann, L.,Widow, U.,Kolmar, H.,Tummler, B.,Heinz, D.W.,Schubert, W. The Crystal Structure of Sdsa1, an Alkylsulfatase from Pseudomonas Aeruginosa, Defines a Third Class of Sulfatases. Proc.Natl.Acad.Sci.USA 2006 103 7631 0 1ZEL 19184528 Crystal structure of RV2827C protein from Mycobacterium tuberculosis 2005-04-19 2006-05-02 Janowski, R.,Panjikar, S.,Eddine, A.N.,Kaufmann, S.H.,Weiss, M.S. Structural analysis reveals DNA binding properties of Rv2827c, a hypothetical protein from Mycobacterium tuberculosis. J Struct Funct Genomics 2009 10 137 150 1ZS0 16451058 Crystal structure of the complex between MMP-8 and a phosphonate inhibitor (S-enantiomer) 2005-05-23 2006-05-02 Pochetti, G.,Gavuzzo, E.,Campestre, C.,Agamennone, M.,Tortorella, P.,Consalvi, V.,Gallina, C.,Hiller, O.,Tschesche, H.,Tucker, P.A.,Mazza, F. Structural insight into the stereoselective inhibition of MMP-8 by enantiomeric sulfonamide phosphonates. J.Med.Chem. 2006 49 923 931 1ZL2 Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with 2,2'-anhydrouridine and phosphate ion at 1.85A resolution 2005-05-05 2006-05-09 Gabdoulkhakov, A.G.,Dontsova, M.V.,Lashkov, A.A.,Betzel, C.,Ealick, S.,Mikhailov, A.M. 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KRISTALLOGRAFIYA 2006 51 663 667 2BS7 16041081 Crystal structure of F17b-G in complex with chitobiose 2005-05-18 2006-05-24 Buts, L.,Wellens, A.,Van Molle, I.,Wyns, L.,Loris, R.,Lahmann, M.,Oscarson, S.,De Greve, H.,Bouckaert, J. Impact of Natural Variation in Bacterial F17G Adhesins on Crystallization Behaviour. Acta Crystallogr.,Sect.D 2005 61 1149 0 2G32 16699193 Crystal structure of an RNA racemate 2006-02-17 2006-05-30 Rypniewski, W.,Vallazza, M.,Perbandt, M.,Klussmann, S.,Delucas, L.J.,Betzel, C.,Erdmann, V.A. The first crystal structure of an RNA racemate. Acta Crystallogr.,Sect.D 2006 62 659 664 2GHU 16777845 Crystal structure of falcipain-2 from Plasmodium falciparum 2006-03-27 2006-06-06 Hogg, T.,Nagarajan, K.,Herzberg, S.,Chen, L.,Shen, X.,Jiang, H.,Wecke, M.,Blohmke, C.,Hilgenfeld, R.,Schmidt, C.L. Structural and Functional Characterization of Falcipain-2, a Hemoglobinase from the Malarial Parasite Plasmodium falciparum. J.Biol.Chem. 2006 281 25425 25437 2FQZ 16628220 Metal-depleted Ecl18kI in complex with uncleaved DNA 2006-01-18 2006-06-20 Bochtler, M.,Szczepanowski, R.H.,Tamulaitis, G.,Grazulis, S.,Czapinska, H.,Manakova, E.,Siksnys, V. Nucleotide flips determine the specificity of the Ecl18kI restriction endonuclease Embo J. 2006 25 2219 2229 2FQZ 16628220 Metal-depleted Ecl18kI in complex with uncleaved DNA 2006-01-18 2006-06-20 Bochtler, M.,Szczepanowski, R.H.,Tamulaitis, G.,Grazulis, S.,Czapinska, H.,Manakova, E.,Siksnys, V. Nucleotide flips determine the specificity of the Ecl18kI restriction endonuclease Embo J. 2006 25 2219 2229 2GPM 16699193 Crystal structure of an RNA racemate 2006-04-18 2006-06-27 Rypniewski, W.,Vallazza, M.,Perbandt, M.,Klussmann, S.,Delucas, L.J.,Betzel, C.,Erdmann, V.A. The first crystal structure of an RNA racemate. 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Acta Crystallogr.,Sect.D 2006 62 659 664 2HAK 16803889 Catalytic and ubiqutin-associated domains of MARK1/PAR-1 2006-06-13 2006-07-11 Marx, A.,Nugoor, C.,Mueller, J.,Panneerselvam, S.,Timm, T.,Bilang, M.,Mylonas, E.,Svergun, D.I.,Mandelkow, E.-M.,Mandelkow, E. Structural variations in the catalytic and ubiquitin-associated domains of microtubule-associated protein/microtubule affinity regulating kinase (MARK) 1 and MARK2 J.Biol.Chem. 2006 281 27586 27599 2GOU 16857682 Structure of wild type, oxidized SYE1, an OYE homologue from S. oneidensis 2006-04-14 2006-07-25 van den Hemel, D.,Brige, A.,Savvides, S.N.,Van Beeumen, J. Ligand-induced conformational changes in the capping subdomain of a bacterial old yellow enzyme homologue and conserved sequence fingerprints provide new insights into substrate binding. J.Biol.Chem. 2006 281 28152 28161 2GQ8 16857682 Structure of SYE1, an OYE homologue from S. ondeidensis, in complex with p-hydroxyacetophenone 2006-04-20 2006-07-25 van den Hemel, D.,Brige, A.,Savvides, S.N.,Van Beeumen, J. Ligand-induced conformational changes in the capping subdomain of a bacterial old yellow enzyme homologue and conserved sequence fingerprints provide new insights into substrate binding. J.Biol.Chem. 2006 281 28152 28161 2GQ9 16857682 Structure of SYE1, an OYE homologue from S. oneidensis, in complex with p-hydroxybenzaldehyde 2006-04-20 2006-07-25 van den Hemel, D.,Brige, A.,Savvides, S.N.,Van Beeumen, J. Ligand-induced conformational changes in the capping subdomain of a bacterial old yellow enzyme homologue and conserved sequence fingerprints provide new insights into substrate binding. J.Biol.Chem. 2006 281 28152 28161 2GQA 16857682 Structure of NADH-reduced SYE1, an OYE homologue from S. oneidensis 2006-04-20 2006-07-25 van den Hemel, D.,Brige, A.,Savvides, S.N.,Van Beeumen, J. Ligand-induced conformational changes in the capping subdomain of a bacterial old yellow enzyme homologue and conserved sequence fingerprints provide new insights into substrate binding. J.Biol.Chem. 2006 281 28152 28161 2HBJ 16882719 Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active site and the HRDC domain 2006-06-14 2006-07-25 Midtgaard, S.F.,Assenholt, J.,Jonstrup, A.T.,Van, L.B.,Jensen, T.H.,Brodersen, D.E. Structure of the nuclear exosome component Rrp6p reveals an interplay between the active site and the HRDC domain. Proc.Natl.Acad.Sci.Usa 2006 103 11898 11903 2G8Q 16730994 The crystal structure of RNase A from monoclinic crystals at 100 K 2006-03-03 2006-08-15 Leonidas, D.D.,Maiti, T.K.,Samanta, A.,Dasgupta, S.,Pathak, T.,Zographos, S.E.,Oikonomakos, N.G. The binding of 3'-N-piperidine-4-carboxyl-3'-deoxy-ara-uridine to ribonuclease A in the crystal. Bioorg.Med.Chem. 2006 14 6055 6064 2G8R 16730994 The crystal structure of the RNase A- 3-N-piperidine-4-carboxyl-3-deoxy-ara-uridine complex 2006-03-03 2006-08-15 Leonidas, D.D.,Maiti, T.K.,Samanta, A.,Dasgupta, S.,Pathak, T.,Zographos, S.E.,Oikonomakos, N.G. The binding of 3'-N-piperidine-4-carboxyl-3'-deoxy-ara-uridine to ribonuclease A in the crystal. Bioorg.Med.Chem. 2006 14 6055 6064 2GXQ 16890241 HERA N-terminal domain in complex with AMP, crystal form 1 2006-05-09 2006-08-22 Rudolph, M.G.,Heissmann, R.,Wittmann, J.G.,Klostermeier, D. Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain. J.Mol.Biol. 2006 351 731 743 2GXQ 16890241 HERA N-terminal domain in complex with AMP, crystal form 1 2006-05-09 2006-08-22 Rudolph, M.G.,Heissmann, R.,Wittmann, J.G.,Klostermeier, D. Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain. J.Mol.Biol. 2006 351 731 743 2C1Y 16699185 Structure of PDI-related Chaperone, Wind mutant-Y55K 2005-09-22 2006-08-29 Sevvana, M.,Biadene, M.,Ma, Q.,Guo, C.,Soling, H.-D.,Sheldrick, G.M.,Ferrari, D.M. Structural Elucidation of the Pdi-Related Chaperone Wind with the Help of Mutants. Acta Crystallogr.,Sect.D 2006 62 589 0 2B46 Crystal structure of an engineered uninhibited Bacillus subtilis xylanase in substrate bound state 2005-09-22 2006-09-19 Sansen, S.,Dewilde, M.,De Ranter, C.J.,Gebruers, K.,Brijs, K.,Courtin, C.M.,Delcour, J.A.,Rabijns, A. Crystal structure of the Triticum xylanse inhibitor-I in complex with bacillus subtilis xylanase To be Published 0 0 0 0 2BE9 18477471 Crystal structure of the CTP-liganded (T-State) aspartate transcarbamoylase from the extremely thermophilic archaeon Sulfolobus acidocaldarius 2005-10-23 2006-10-31 De Vos, D.,Xu, Y.,Aerts, T.,Van Petegem, F.,Van Beeumen, J.J. Crystal structure of Sulfolobus acidocaldarius aspartate carbamoyltransferase in complex with its allosteric activator CTP. Biochem.Biophys.Res.Commun. 2008 372 40 44 2C0Y 17075137 THE CRYSTAL STRUCTURE OF A CYS25ALA MUTANT OF HUMAN PROCATHEPSIN S 2005-09-08 2006-11-08 Kaulmann, G.,Palm, G.J.,Schilling, K.,Hilgenfeld, R.,Wiederanders, B. The Crystal Structure of a Cys25 -> Ala Mutant of Human Procathepsin S Elucidates Enzyme-Prosequence Interactions. Protein Sci. 2006 15 2619 0 2C0L 17157249 TPR DOMAIN OF HUMAN PEX5P IN COMPLEX WITH HUMAN MSCP2 2005-09-05 2006-11-15 Stanley, W.A.,Filipp, F.V.,Kursula, P.,Schuller, N.,Erdmann, R.,Schliebs, W.,Sattler, M.,Wilmanns, M. Recognition of a Functional Peroxisome Type 1 Target by the Dynamic Import Receptor Pex5P. Mol.Cell 2006 24 653 0 2D4M 17169987 Crystal Structure of apo M-PMV dUTPase 2005-10-20 2006-11-21 Nemeth-Pongracz, V.,Barabas, O.,Fuxreiter, M.,Simon, I.,Pichova, I.,Rumlova, M.,Zabranska, H.,Svergun, D.,Petoukhov, M.,Harmat, V.,Klement, E.,Hunyadi-Gulyas, E.,Medzihradszky, K.F.,Konya, E.,Vertessy, B.G. Flexible segments modulate co-folding of dUTPase and nucleocapsid proteins. Nucleic Acids Res. 2007 35 495 505 2NWJ Structure of the complex of C-terminal lobe of bovine lactoferrin with disaccharide at 1.75 A resolution 2006-11-15 2006-11-28 Singh, N.,Sharma, S.,Perbandt, M.,Kaur, P.,Betzel, C.,Singh, T.P. Structure of the complex of C-terminal lobe of bovine lactoferrin with disaccharide at 1.75 A resolution To be Published 0 0 0 0 2G2N 16723258 Crystal Structure of E.coli transthyretin-related protein with bound Zn 2006-02-16 2006-12-12 Lundberg, E.,Backstrom, S.,Sauer, U.H.,Sauer-Eriksson, A.E. The transthyretin-related protein: structural investigation of a novel protein family J.Struct.Biol. 2006 155 445 457 2G2P 16723258 Crystal Structure of E.coli transthyretin-related protein with bound Zn and Br 2006-02-16 2006-12-12 Lundberg, E.,Backstrom, S.,Sauer, U.H.,Sauer-Eriksson, A.E. The transthyretin-related protein: structural investigation of a novel protein family J.Struct.Biol. 2006 155 445 457 2FET Synthesis of C-D-Glycopyranosyl-Hydroquinones and-Benzoquinones. Inhibition of PTP1B. Inhibition of and binding to glycogen phosphorylase in the crystal 2005-12-16 2006-12-19 He, L.,Zhang, Y.Z.,Tanoh, M.,Chen, G.-R.,Praly, J.-P.,Chrysina, E.D.,Tiraidis, C.,Kosmopoulou, M.,Leonidas, D.D.,Oikonomakos, N.G. In the Search of Glycogen Phosphorylase Inhibitors: Synthesis of C-D-Glycopyranosylbenzo(hydro)quinones Inhibition of and Binding to Glycogen Phosphorylase in the Crystal Eur.J.Org.Chem. 2007 4 596 606 2FF5 Synthesis of C-D-Glycopyranosyl-Hydroquinones and-Benzoquinones. Inhibition of PTP1B. Inhibition of and binding to glycogen phosphorylase in the crystal 2005-12-19 2006-12-19 He, L.,Zhang, Y.Z.,Tanoh, M.,Chen, G.-R.,Praly, J.-P.,Chrysina, E.D.,Tiraidis, C.,Kosmopoulou, M.,Leonidas, D.D.,Oikonomakos, N.G. In the Search of Glycogen Phosphorylase Inhibitors: Synthesis of C-D-Glycopyranosylbenzo(hydro)quinones Inhibition of and Binding to Glycogen Phosphorylase in the Crystal Eur.J.Org.Chem. 2007 4 596 606 2O1L Structure of a complex of C-terminal lobe of bovine lactoferrin with disaccharide at 1.97 A resolution 2006-11-29 2006-12-19 Singh, N.,Sharma, S.,Perbandt, M.,Kaur, P.,Betzel, C.,Singh, T.P. Structure of a complex of C-terminal lobe of bovine lactoferrin with disaccharide at 1.97 A resolution To be Published 0 0 0 0 2NUV Crystal structure of the complex of C-terminal lobe of bovine lactoferrin with atenolol at 2.25 A resolution 2006-11-10 2006-12-26 Mir, R.,Singh, N.,Sinha, M.,Sharma, S.,Perbandt, M.,Kaur, P.,Betzel, C.,Singh, T.P. Crystal structure of the complex of C-terminal lobe of bovine lactoferrin with atenolol at 2.25 A resolution To be Published 0 0 0 0 2G9R 16970395 The crystal structure of glycogen phosphorylase b in complex with (3R,4R,5R)-5-hydroxymethyl-1-(3-phenylpropyl)-piperidine-3,4-diol 2006-03-07 2007-01-16 Oikonomakos, N.G.,Tiraidis, C.,Leonidas, D.D.,Zographos, S.E.,Kristiansen, M.,Jessen, C.U.,Norskov-Lauritsen, L.,Agius, L. Iminosugars as potential inhibitors of glycogenolysis: structural insights into the molecular basis of glycogen phosphorylase inhibition. J.Med.Chem. 2006 49 5687 5701 2G9U 16970395 The crystal structure of glycogen phosphorylase in complex with (3R,4R,5R)-5-hydroxymethyl-1-(3-phenylpropyl)-piperidine-3,4-diol and phosphate 2006-03-07 2007-01-16 Oikonomakos, N.G.,Tiraidis, C.,Leonidas, D.D.,Zographos, S.E.,Kristiansen, M.,Jessen, C.U.,Norskov-Lauritsen, L.,Agius, L. Iminosugars as potential inhibitors of glycogenolysis: structural insights into the molecular basis of glycogen phosphorylase inhibition. J.Med.Chem. 2006 49 5687 5701 2G9V 16970395 The crystal structure of glycogen phosphorylase in complex with (3R,4R,5R)-5-hydroxymethylpiperidine-3,4-diol and phosphate 2006-03-07 2007-01-16 Oikonomakos, N.G.,Tiraidis, C.,Leonidas, D.D.,Zographos, S.E.,Kristiansen, M.,Jessen, C.U.,Norskov-Lauritsen, L.,Agius, L. Iminosugars as potential inhibitors of glycogenolysis: structural insights into the molecular basis of glycogen phosphorylase inhibition. J.Med.Chem. 2006 49 5687 5701 2J96 17209552 The E-configuration of alfa-Phycoerythrocyanin 2006-11-02 2007-01-23 Schmidt, M.,Patel, A.,Zhao, Y.,Reuter, W. Structural Basis for the Photochemistry of Alfa-Phycoerythrocyanin Biochemistry 2007 46 416 0 2OB2 17372358 ppm1 in the absence of 1,8-ANS (cf 1JD) 2006-12-18 2007-01-30 Groves, M.R.,Muller, I.B.,Kreplin, X.,Muller-Dieckmann, J. A method for the general identification of protein crystals in crystallization experiments using a noncovalent fluorescent dye. Acta Crystallogr.,Sect.D 2007 63 526 535 2G5L Streptavidin in complex with Nanotag 2006-02-23 2007-02-06 Perbandt, M.,Bruns, O.,Vallazza, M.,Lamla, T.,Betzel, C.,Erdmann, V.A. High resolution structure of Streptavidin in complex with a novel high affinity peptide tag mimicking the biotin binding motif To be Published 0 0 0 0 2I9V 17198379 Structural role of Y98 in PYP: effects on fluorescence, gateway and photocycle recovery 2006-09-06 2007-02-06 Kyndt, J.A.,Savvides, S.N.,Memmi, S.,Koh, M.,Fitch, J.C.,Meyer, T.E.,Heyn, M.P.,Van Beeumen, J.J.,Cusanovich, M.A. Structural role of tyrosine 98 in photoactive yellow protein: effects on fluorescence, gateway, and photocycle recovery. Biochemistry 2007 46 95 105 2O0R 17292400 The three-dimensional structure of N-Succinyldiaminopimelate aminotransferase from Mycobacterium tuberculosis 2006-11-28 2007-02-27 Weyand, S.,Kefala, G.,Weiss, M.S. The Three-dimensional Structure of N-Succinyldiaminopimelate Aminotransferase from Mycobacterium tuberculosis J.Mol.Biol. 2007 367 825 838 2OG5 17373765 Crystal structure of asparagine oxygenase (AsnO) 2007-01-05 2007-03-06 Strieker, M.,Kopp, F.,Mahlert, C.,Essen, L.O.,Marahiel, M.A. Mechanistic and structural basis of stereospecific Cbeta-hydroxylation in calcium-dependent antibiotic, a daptomycin-type lipopeptide. Acs Chem.Biol. 2007 2 187 196 2OG7 17373765 Cystal structure of asparagine oxygenase in complex with Fe(II), 2S,3S-3-hydroxyasparagine and succinate 2007-01-05 2007-03-06 Strieker, M.,Kopp, F.,Mahlert, C.,Essen, L.-O.,Marahiel, M.A. Mechanistic and structural basis of stereospecific Cbeta-hydroxylation in calcium-dependent antibiotic, a daptomycin-type lipopeptide Acs Chem.Biol. 2007 2 187 196 2CIJ membrane-bound glutamate carboxypeptidase II (GCPII) with bound methionine 2006-03-21 2007-03-27 Mesters, J.R.,Hilgenfeld, R. Glutamate Carboxypeptidase II Handbook of Metalloproteins 2011 4 681 0 2J6R 17368480 FaeG from F4ac ETEC strain GIS26, produced in tobacco plant chloroplast 2006-10-03 2007-04-10 Van Molle, I.,Joensuu, J.J.,Buts, L.,Panjikar, S.,Kotiaho, M.,Bouckaert, J.,Wyns, L.,Niklander-Teeri, V.,De Greve, H. Chloroplasts Assemble the Major Subunit Faeg of Escherichia Coli F4 (K88) Fimbriae Into Strand-Swapped Dimers J.Mol.Biol. 2007 368 791 0 2J9Q 17428317 A novel conformation for the TPR domain of pex5p 2006-11-15 2007-04-17 Stanley, W.A.,Pursiainen, N.,Garman, E.F.,Juffer, A.,Wilmanns, M.,Kursula, P. A Previously Unobserved Conformation for the Human Pex5P Receptor Suggests Roles for Intrinsic Flexibility and Rigid Domain Motions in Ligand Binding Bmc Struct.Biol. 2007 7 24 0 2CGQ a putative acyl carrier protein(Rv0033) from Mycobacterium tuberculosis 2006-03-09 2007-05-01 Ma, Q.,Wilmanns, M. The Structure of a Putative Acyl Carrier Protein (Rv0033) from Mycobacterium Tuberculosis To be Published 0 0 0 0 2HI8 17452787 human formylglycine generating enzyme, C336S mutant, bromide co-crystallization 2006-06-29 2007-05-01 Roeser, D.,Schmidt, B.,Preusser-Kunze, A.,Rudolph, M.G. Probing the oxygen-binding site of the human formylglycine-generating enzyme using halide ions. Acta Crystallogr.,Sect.D 2007 63 621 627 2PI6 19307719 Crystal structure of the sheep signalling glycoprotein (SPS-40) complex with 2-methyl-2-4-pentanediol at 1.65A resolution reveals specific binding characteristics of SPS-40 2007-04-13 2007-05-01 Sharma, P.,Singh, N.,Sinha, M.,Sharma, S.,Perbandt, M.,Betzel, C.,Kaur, P.,Srinivasan, A.,Singh, T.P. Tryptophan as a three-way switch in regulating the function of the secretory signalling glycoprotein (SPS-40) from mammary glands: structure of SPS-40 complexed with 2-methylpentane-2,4-diol at 1.6 A resolution. Acta Crystallogr.,Sect.D 2009 65 375 378 2CKE Human death-associated DRP-1 kinase in complex with inhibitor 2006-04-18 2007-05-15 Kursula, P.,Wilmanns, M. Crystal Structure of Human Drp-1 Complexed with an Inhibitor To be Published 0 0 0 0 2J4S 17429965 P450 BM3 heme domain in complex with DMSO 2006-09-05 2007-05-15 Kuper, J.,Wong, T.S.,Roccatano, D.,Wilmanns, M.,Schwaneberg, U. Understanding a Mechanism of Organic Cosolvent Inactivation in Heme Monooxygenase P450 Bm-3. J.Am.Chem.Soc. 2007 129 5786 0 2O7O 17361981 Crystal structure analysis of TetR(D) complex with doxycycline 2006-12-11 2007-05-15 Aleksandrov, A.,Proft, J.,Hinrichs, W.,Simonson, T. Protonation Patterns in Tetracycline:Tet Repressor Recognition: Simulations and Experiments Chembiochem 2007 8 675 685 2JCJ 17493636 Crystal structure of alpha-1,3 Galactosyltransferase (C-terminus truncated mutant-C3) in complex with UDP and Tris 2006-12-25 2007-05-22 Jamaluddin, H.,Tumbale, P.,Withers, S.G.,Acharya, K.R.,Brew, K. Conformational Changes Induced by Binding Udp-2F-Galactose to Alpha-1,3 Galactosyltransferase-Implications for Catalysis. J.Mol.Biol. 2007 369 1270 0 2OC2 17439247 Structure of testis ACE with RXPA380 2006-12-20 2007-05-22 Corradi, H.R.,Chitapi, I.,Sewell, B.T.,Georgiadis, D.,Dive, V.,Sturrock, E.D.,Acharya, K.R. The structure of testis angiotensin-converting enzyme in complex with the C domain-specific inhibitor RXPA380. Biochemistry 2007 46 5473 5478 2PT3 Crystal structure of bovine lactoperoxidase at 2.34 A resolution reveals multiple anion binding sites 2007-05-08 2007-05-22 Singh, A.K.,Singh, N.,Sharma, S.,Perbandt, M.,Kaur, P.,Betzel, C.,Srinivasan, A.,Singh, T.P. Crystal structure of bovine lactoperoxidase at 2.34 A resolution reveals multiple anion binding sites To be Published 0 0 0 0 2H5U 17012782 Crystal structure of laccase from Cerrena maxima at 1.9A resolution 2006-05-27 2007-05-29 Lyashenko, A.V.,Zhukhlistova, N.E.,Gabdoulkhakov, A.G.,Zaitsev, V.N.,Bento, I.,Lamzin, V.S.,Betzel, C.,Lindley, P.F.,Koroleva, O.V.,Zhukova, Y.N.,Stepanova, E.V.,Morgunova, E.Y.,Voelter, W.,Schirwitz, K.,Tishkov, V.I.,Kachalova, G.S.,Cherkashyn, E.A.,Mikhailov, A.M. Purification, crystallization and preliminary X-ray study of the fungal laccase from Cerrena maxima Acta Crystallogr.,Sect.F 2006 62 954 957 2P6Z 17560606 Enzymatic and Structural Characterisation of Amphinase, a Novel Cytotoxic Ribonuclease from Rana pipiens Oocytes 2007-03-19 2007-05-29 Singh, U.P.,Ardelt, W.,Saxena, S.K.,Holloway, D.E.,Vidunas, E.,Lee, H.S.,Saxena, A.,Shogen, K.,Acharya, K.R. Enzymatic and Structural Characterisation of Amphinase, a Novel Cytotoxic Ribonuclease from Rana pipiens Oocytes. J.Mol.Biol. 2007 371 93 111 2J6I 17525463 Candida boidinii formate dehydrogenase (FDH) C-terminal mutant 2006-09-29 2007-06-05 Schirwitz, K.,Schmidt, A.,Lamzin, V.S. High-Resolution Structures of Formate Dehydrogenase from Candida Boidinii. Protein Sci. 2007 16 1146 0 2PHR 17556509 Pterocarpus angolensis lectin (PAL) in complex with Man-7D1 2007-04-12 2007-07-10 Garcia-Pino, A.,Buts, L.,Wyns, L.,Imberty, A.,Loris, R. How a plant lectin recognizes high mannose oligosaccharides Plant Physiol. 2007 144 1733 1741 2HN9 Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with thymine and phosphate ion at 2.12A resolution 2006-07-12 2007-07-17 Gabdoulkhakov, A.G.,Timofeev, V.I.,Dontsova, M.V.,Kachalova, G.S.,Voelter, W.,Betzel, C.,Mikhailov, A.M. Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with thymine and phosphate ion at 2.12A resolution To be Published 0 0 0 0 2HNL 18258257 Structure of the prostaglandin D synthase from the parasitic nematode Onchocerca volvulus 2006-07-13 2007-07-17 Perbandt, M.,Hoppner, J.,Burmeister, C.,Luersen, K.,Betzel, C.,Liebau, E. Structure of the extracellular glutathione S-transferase OvGST1 from the human pathogenic parasite Onchocerca volvulus. J.Mol.Biol. 2008 377 501 511 2HRD Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with thymine and phosphate ion at 1.70A resolution 2006-07-20 2007-07-24 Timofeev, V.I.,Gabdulkhakov, A.G.,Mikhailov, A.M.,Dontsova, M.V.,Voelter, W.,Betzel, C. Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with thymine and phosphate ion at 1.70A resolution To be Published 0 0 0 0 2HSW Crystal structure of the uridine phosphorylase from Salmonella typhimurium in unliganded state at 1.99A resolution 2006-07-24 2007-07-24 Timofeev, V.I.,Dontsova, M.V.,Gabdoulkhakov, A.G.,Mikhailov, A.M.,Lashkov, A.A.,Voelter, V.,Kachalova, G.S. Crystal structure of the uridine phosphorylase from Salmonella typhimurium in unliganded state at 1.99A resolution To be Published 0 0 0 0 2NQD 17561110 Crystal structure of cysteine protease inhibitor, chagasin, in complex with human cathepsin L 2006-10-31 2007-07-24 Ljunggren, A.,Redzynia, I.,Alvarez-Fernandez, M.,Abrahamson, M.,Mort, J.S.,Krupa, J.C.,Jaskolski, M.,Bujacz, G. Crystal structure of the parasite protease inhibitor chagasin in complex with a host target cysteine protease J.Mol.Biol. 2007 371 137 153 2O87 17368484 S. aureus thioredoxin P31S mutant 2006-12-12 2007-07-24 Roos, G.,Garcia-Pino, A.,Van Belle, K.,Brosens, E.,Wahni, K.,Vandenbussche, G.,Wyns, L.,Loris, R.,Messens, J. The conserved active site proline determines the reducing power of Staphylococcus aureus thioredoxin J.Mol.Biol. 2007 368 800 811 2HWU Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with uridine and phosphate ion at 2.91A resolution 2006-08-02 2007-08-07 Timofeev, V.I.,Gabdulkhakov, A.G.,Dontsova, M.V.,Voelter, W.,Kachalova, G.S.,Mikhailov, A.M. Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with uridine and phosphate ion at 2.91A resolution To be Published 0 0 0 0 2J8H 17574571 Structure of the immunoglobulin tandem repeat A168-A169 of titin 2006-10-25 2007-08-21 Mueller, S.,Lange, S.,Gautel, M.,Wilmanns, M. Rigid Conformation of an Immunoglobulin Domain Tandem Repeat in the A-Band of the Elastic Muscle Protein Titin J.Mol.Biol. 2007 371 469 0 2J8O 17574571 Structure of the immunoglobulin tandem repeat of titin A168-A169 2006-10-26 2007-08-21 Mueller, S.,Lange, S.,Gautel, M.,Wilmanns, M. Rigid Conformation of an Immunoglobulin Domain Tandem Repeat in the A-Band of the Elastic Muscle Protein Titin J.Mol.Biol. 2007 371 469 0 2OMT 17715295 Crystal structure of InlA G194S+S/hEC1 complex 2007-01-23 2007-08-28 Wollert, T.,Heinz, D.W.,Schubert, W.D. Thermodynamically reengineering the listerial invasion complex InlA/E-cadherin. Proc.Natl.Acad.Sci.Usa 2007 104 13960 13965 2OMU 17715295 Crystal structure of InlA G194S+S Y369S/hEC1 complex 2007-01-23 2007-08-28 Wollert, T.,Heinz, D.W.,Schubert, W.D. Thermodynamically reengineering the listerial invasion complex InlA/E-cadherin. Proc.Natl.Acad.Sci.Usa 2007 104 13960 13965 2I8A Salmonella typhimurium liganded by phosphate ion at 1.64A resolution 2006-09-01 2007-09-04 Timofeev, V.I.,Dontsova, M.V.,Gabdoulkhakov, A.G.,Lashkov, A.A.,Voelter, V.,Kachalova, G.S.,Pavlyuk, B.P.,Mikhailov, A.M. Salmonella typhimurium liganded by phosphate ion at 1.64A resolution To be Published 0 0 0 0 2PQX E. coli RNase 1 (in vivo folded) 2007-05-03 2007-09-18 Messens, J.,Collet, J.F.,Loris, R.,Wyns, L. Crystal structure of E. coli ribonuclease 1 To be Published 0 0 0 0 2VAL 17888869 Crystal structure of an Escherichia coli tRNAGly microhelix at 2.0 Angstrom resolution 2007-09-03 2007-10-16 Forster, C.,Brauer, A.B.E.,Perbandt, M.,Lehmann, D.,Furste, J.P.,Betzel, C.,Erdmann, V.A. Crystal Structure of an Escherichia Coli Trnagly Microhelix at 2.0 Angstrom Resolution Biochem.Biophys.Res.Commun. 2007 363 621 0 2R9K 17937929 Crystal Structure of Misteltoe Lectin I in Complex with Phloretamide 2007-09-13 2007-10-30 Meyer, A.,Rypniewski, W.,Celewicz, L.,Erdmann, V.A.,Voelter, W.,Singh, T.P.,Genov, N.,Barciszewski, J.,Betzel, C.h. The mistletoe lectin I--phloretamide structure reveals a new function of plant lectins. Biochem.Biophys.Res.Commun. 2007 364 195 200 2QCE 18184586 Crystal structure of the orotidine-5'-monophosphate decarboxylase domain of human UMP synthase bound to sulfate, glycerol, and chloride 2007-06-19 2007-11-06 Wittmann, J.G.,Heinrich, D.,Gasow, K.,Frey, A.,Diederichsen, U.,Rudolph, M.G. Structures of the human orotidine-5'-monophosphate decarboxylase support a covalent mechanism and provide a framework for drug design. Structure 2008 16 82 92 2QCF 18184586 Crystal structure of the orotidine-5'-monophosphate decarboxylase domain (Asp312Asn mutant) of human UMP synthase bound to 5-fluoro-UMP 2007-06-19 2007-11-06 Wittmann, J.G.,Heinrich, D.,Gasow, K.,Frey, A.,Diederichsen, U.,Rudolph, M.G. Structures of the human orotidine-5'-monophosphate decarboxylase support a covalent mechanism and provide a framework for drug design. Structure 2008 16 82 92 2J97 18694760 Human coronavirus 229E non structural protein 9 (Nsp9) 2006-11-03 2007-11-27 Ponnusamy, R.,Moll, R.,Weimar, T.,Mesters, J.R.,Hilgenfeld, R. Variable Oligomerization Modes in Coronavirus Non-Structural Protein 9. J.Mol.Biol. 2008 383 1081 0 2J98 18694760 Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9) 2006-11-03 2007-11-27 Ponnusamy, R.,Moll, R.,Weimar, T.,Mesters, J.R.,Hilgenfeld, R. Variable Oligomerization Modes in Coronavirus Non-Structural Protein 9. J.Mol.Biol. 2008 383 1081 0 3BAL Crystal Structure of an Acetylacetone Dioxygenase from Acinetobacter johnsonii 2007-11-08 2007-11-27 Stranzl, G.R.,Wagner, U.G.,Straganz, G.,Steiner, W.,Kratky, C. Crystal Structure of an Acetylacetone Dioxygenase from Acinetobacter johnsonii To be Published 0 0 0 0 2OEC Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with 2,2'-anhydrouridine and potassium ion at 2.194A resolution 2006-12-29 2008-01-01 Timofeev, V.I.,Lashkov, A.A.,Pavlyuk, B.P.,Gabdoulkhakov, A.G.,Kachalova, G.S.,Mikhailov, A.M. Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with 2,2'-anhydrouridine and potassium ion at 2.194A resolution To be Published 0 0 0 0 2VCG 18054239 Crystal structure of a HDAC-like protein HDAH from Bordetella sp. with the bound inhibitor ST-17 2007-09-24 2008-01-08 Schaefer, S.,Saunders, L.,Eliseeva, E.,Velena, A.,Jung, M.,Schwienhorst, A.,Strasser, A.,Dickmanns, A.,Ficner, R.,Schlimme, S.,Sippl, W.,Verdin, E.,Jung, M. Phenylalanine-Containing Hydroxamic Acids as Selective Inhibitors of Class Iib Histone Deacetylases (Hdacs). Bioorg.Med.Chem. 2008 16 2011 0 2OWM 18205396 Motor domain of Neurospora crassa kinesin-3 (NcKin3) 2007-02-16 2008-01-29 Marx, A.,Muller, J.,Mandelkow, E.-M.,Woehlke, G.,Bouchet-Marquis, C.,Hoenger, A.,Mandelkow, E. X-ray Structure and Microtubule Interaction of the Motor Domain of Neurospora crassa NcKin3, a Kinesin with Unusual Processivity Biochemistry 2008 47 1848 1861 2JF6 17890378 Structure of inactive mutant of Strictosidine Glucosidase in complex with strictosidine 2007-01-26 2008-02-05 Barleben, L.,Panjikar, S.,Ruppert, M.,Koepke, J.,Stockigt, J. Molecular Architecture of Strictosidine Glucosidase - the Gateway to the Biosynthesis of the Monoterpenoid Indole Alkaloid Family Plant Cell 2007 19 2886 0 2RAB 17977556 Structure of glutathione amide reductase from Chromatium gracile in complex with NAD 2007-09-14 2008-02-19 Van Petegem, F.,De Vos, D.,Savvides, S.,Vergauwen, B.,Van Beeumen, J. Understanding nicotinamide dinucleotide cofactor and substrate specificity in class I flavoprotein disulfide oxidoreductases: crystallographic analysis of a glutathione amide reductase. J.Mol.Biol. 2007 374 883 889 2VEL 18239072 Structure-based enzyme engineering efforts with an inactive monomeric TIM variant: the importance of a single point mutation for generating an active site with suitable binding properties 2007-10-24 2008-02-19 Alahuhta, M.,Salin, M.,Casteleijn, M.G.,Kemmer, C.,El-Sayed, I.,Augustyns, K.,Neubauer, P.,Wierenga, R.K. Structure-Based Protein Engineering Efforts with a Monomeric Tim Variant: The Importance of a Single Point Mutation for Generating an Active Site with Suitable Binding Properties. Protein Eng.Des.Sel. 2008 21 257 0 2VEM 18239072 Structure-based enzyme engineering efforts with an inactive monomeric TIM variant: the importance of a single point mutation for generating an active site with suitable binding properties 2007-10-25 2008-02-19 Alahuhta, M.,Salin, M.,Casteleijn, M.G.,Kemmer, C.,El-Sayed, I.,Augustyns, K.,Neubauer, P.,Wierenga, R.K. Structure-Based Protein Engineering Efforts with a Monomeric Tim Variant: The Importance of a Single Point Mutation for Generating an Active Site with Suitable Binding Properties. Protein Eng.Des.Sel. 2008 21 257 0 2VEN 18239072 Structure-based enzyme engineering efforts with an inactive monomeric TIM variant: the importance of a single point mutation for generating an active site with suitable binding properties 2007-10-25 2008-02-19 Alahuhta, M.,Salin, M.,Casteleijn, M.G.,Kemmer, C.,El-Sayed, I.,Augustyns, K.,Neubauer, P.,Wierenga, R.K. Structure-Based Protein Engineering Efforts with a Monomeric Tim Variant: The Importance of a Single Point Mutation for Generating an Active Site with Suitable Binding Properties. Protein Eng.Des.Sel. 2008 21 257 0 2OXF X-ray structure of the unliganded uridine phosphorylase from Salmonella typhimurium in homodimeric form at 1.76A resolution 2007-02-20 2008-02-26 Timofeev, V.I.,Pavlyk, B.P.,Lashkov, A.A.,Gabdoulkhakov, A.G.,Mikhailov, A.M. X-ray structure of the unliganded uridine phosphorylase from Salmonella typhimurium in homodimeric form at 1.76A resolution To be Published 0 0 0 0 2VDG 18300247 Barley Aldose Reductase 1 complex with butanol 2007-10-08 2008-03-11 Olsen, J.G.,Pedersen, L.,Christensen, C.L.,Olsen, O.,Henriksen, A. Barley Aldose Reductase: Structure, Cofactor Binding, and Substrate Recognition in the Aldo/Keto Reductase 4C Family. Proteins: Struct., Funct., Bio 2008 71 1572 0 2VPR 18395746 Tet repressor class H in complex with 5a,6- anhydrotetracycline-Mg 2008-03-03 2008-03-11 Aleksandrov, A.,Schuldt, L.,Hinrichs, W.,Simonson, T. Tet Repressor Induction by Tetracycline: A Molecular Dynamics, Continuum Electrostatics, and Crystallographic Study J.Mol.Biol. 2008 378 896 0 2V7R 18279665 Crystal structure of a human tRNAGly microhelix at 1.2 Angstrom resolution 2007-08-01 2008-03-18 Foerster, C.,Mankowska, M.,Fuerste, J.P.,Perbandt, M.,Betzel, C.,Erdmann, V.A. Crystal Structure of a Human Trnagly Microhelix at 1.2 A Resolution. Biochem.Biophys.Res.Commun. 2008 368 996 0 3C2X 18395744 Crystal structure of peptidoglycan recognition protein at 1.8A resolution 2008-01-26 2008-03-25 Sharma, P.,Singh, N.,Sinha, M.,Sharma, S.,Perbandt, M.,Betzel, C.,Kaur, P.,Srinivasan, A.,Singh, T.P. Crystal structure of the peptidoglycan recognition protein at 1.8 A resolution reveals dual strategy to combat infection through two independent functional homodimers J.Mol.Biol. 2008 378 921 930 2PYD 18041758 The crystal structure of Glycogen phosphorylase in complex with glucose at 100 K 2007-05-16 2008-04-01 Alexacou, K.M.,Hayes, J.M.,Tiraidis, C.,Zographos, S.E.,Leonidas, D.D.,Chrysina, E.D.,Archontis, G.,Oikonomakos, N.G.,Paul, J.V.,Varghese, B.,Loganathan, D. Crystallographic and computational studies on 4-phenyl-N-(beta-D-glucopyranosyl)-1H-1,2,3-triazole-1-acetamide, an inhibitor of glycogen phosphorylase: Comparison with alpha-D-glucose, N-acetyl-beta-D-glucopyranosylamine and N-benzoyl-N'-beta-D-glucopyranosyl urea binding. Proteins 2007 71 1307 1323 2PYI 18041758 Crystal structure of Glycogen Phosphorylase in complex with glucosyl triazoleacetamide 2007-05-16 2008-04-01 Alexacou, K.M.,Hayes, J.M.,Tiraidis, C.,Zographos, S.E.,Leonidas, D.D.,Chrysina, E.D.,Archontis, G.,Oikonomakos, N.G.,Paul, J.V.,Varghese, B.,Loganathan, D. Crystallographic and computational studies on 4-phenyl-N-(beta-D-glucopyranosyl)-1H-1,2,3-triazole-1-acetamide, an inhibitor of glycogen phosphorylase: Comparison with alpha-D-glucose, N-acetyl-beta-D-glucopyranosylamine and N-benzoyl-N'-beta-D-glucopyranosyl urea binding. Proteins 2007 71 1307 1323 2PGA X-ray Structure of the Uridine Phosphorylase From SALMONELLA TYPHIMURIUM in Complex with Inhibitor and Phosphate and Potassium Ion at 1.74 A Resolution 2007-04-09 2008-04-15 Timofeev, V.I.,Lashkov, A.A.,Gabdoulkhakov, A.G.,Betzel, C.,Mikhailov, A.M. X-ray Structure of the Uridine Phosphorylase From SALMONELLA TYPHIMURIUM in Complex with Inhibitor and Phosphate and Potassium Ion at 1.74 A Resolution To be Published 0 0 0 0 2PWR 18348517 HIV-1 protease in complex with a carbamoyl decorated pyrrolidine-based inhibitor 2007-05-12 2008-04-15 Blum, A.,Bottcher, J.,Heine, A.,Klebe, G.,Diederich, W.E. Structure-Guided Design of C2-Symmetric HIV-1 Protease Inhibitors Based on a Pyrrolidine Scaffold. J.Med.Chem. 2008 51 2078 2087 2QQU 18258263 Crystal structure of a cell-wall invertase (D239A) from Arabidopsis thaliana in complex with sucrose 2007-07-27 2008-04-22 Lammens, W.,Le Roy, K.,Van Laere, A.,Rabijns, A.,Van den Ende, W. Crystal structures of Arabidopsis thaliana cell-wall invertase mutants in complex with sucrose. J.Mol.Biol. 2008 377 378 385 2QIM 18406424 Crystal Structure of Pathogenesis-related Protein LlPR-10.2B from yellow lupine in complex with Cytokinin 2007-07-05 2008-04-29 Fernandes, H.,Pasternak, O.,Bujacz, G.,Bujacz, A.,Sikorski, M.M.,Jaskolski, M. Lupinus luteus pathogenesis-related protein as a reservoir for cytokinin. J.Mol.Biol. 2008 378 1040 1051 2UYC HhaI DNA methyltransferase R163N mutant complex with 13mer GCGC-GMGC oligonucleotide and SAH 2007-04-03 2008-05-27 Daujotyte, D.,Grazulis, S. HhaI DNA Methyltransferase R163N Mutant Complex with 13mer Gcgc-Gmgc Oligonucleotide and Sah To be Published 0 0 0 0 2UYH HhaI DNA methyltransferase S87Q-Q237S mutant complex with 13mer GCGC- GMGC oligonucleotide and SAH 2007-04-06 2008-05-27 Daujotyte, D.,Grazulis, S. HhaI DNA Methyltransferase S87Q-Q237S Mutant Complex with 13mer Gcgc-Gmgc Oligonucleotide and Sah To be Published 0 0 0 0 2QN1 18517260 Glycogen Phosphorylase b in complex with asiatic acid 2007-07-17 2008-06-03 Wen, X.,Sun, H.,Liu, J.,Cheng, K.,Zhang, P.,Zhang, L.,Hao, J.,Zhang, L.,Ni, P.,Zographos, S.E.,Leonidas, D.D.,Alexacou, K.-M.,Gimisis, T.,Hayes, J.M.,Oikonomakos, N.G. Naturally occurring pentacyclic triterpenes as inhibitors of glycogen phosphorylase: synthesis, structure-activity relationships, and X-ray crystallographic studies J.Med.Chem. 2008 51 3540 3554 2QN2 18517260 Glycogen Phosphorylase b in complex with Maslinic Acid 2007-07-17 2008-06-03 Wen, X.,Sun, H.,Liu, J.,Cheng, K.,Zhang, P.,Zhang, L.,Hao, J.,Zhang, L.,Ni, P.,Zographos, S.E.,Leonidas, D.D.,Alexacou, K.-M.,Gimisis, T.,Hayes, J.M.,Oikonomakos, N.G. Naturally occurring pentacyclic triterpenes as inhibitors of glycogen phosphorylase: synthesis, structure-activity relationships, and X-ray crystallographic studies J.Med.Chem. 2008 51 3540 3554 2UZ4 HhaI DNA methyltransferase R165N mutant complex with 13mer GCGC-GMGC oligonucleotide and SAH 2007-04-25 2008-06-03 Daujotyte, D.,Leinartaite, L.,Grazulis, S. DNA Methyltransferase R165N Mutant To be Published 0 0 0 0 2Q8W Crystal structure of PAP-S1aci, a pokeweed antiviral protein from seeds of Phytolacca acinosa 2007-06-12 2008-06-17 Hogg, T.,Bezouska, K.,Ulbrich, N.,Kuta Smatanova, I.,Hilgenfeld, R. The complete covalent structure and 1.7 A crystal structure of PAP-S1aci reveals a RIP glycoprotein with multiple Asn-GlcNAc modifications To be Published 0 0 0 0 2V9B 18703848 X-ray structure of viscotoxin B2 from Viscum album 2007-08-23 2008-06-17 Pal, A.,Debreczeni, J.E.,Sevvana, M.,Gruene, T.,Kahle, B.,Zeeck, A.,Sheldrick, G.M. Structures of viscotoxins A1 and B2 from European mistletoe solved using native data alone. Acta Crystallogr. D Biol. Crys 2008 64 985 992 3CMC 18480053 Thioacylenzyme intermediate of Bacillus stearothermophilus phosphorylating GAPDH 2008-03-21 2008-06-17 Moniot, S.,Bruno, S.,Vonrhein, C.,Didierjean, C.,Boschi-Muller, S.,Vas, M.,Bricogne, G.,Branlant, G.,Mozzarelli, A.,Corbier, C. Trapping of the Thioacylglyceraldehyde-3-phosphate Dehydrogenase Intermediate from Bacillus stearothermophilus: DIRECT EVIDENCE FOR A FLIP-FLOP MECHANISM J.Biol.Chem. 2008 283 21693 21702 3D7W 18718563 Mistletoe Lectin I in Complex with Zeatin 2008-05-22 2008-06-17 Meyer, A.,Rypniewski, W.,Szymanski, M.,Voelter, W.,Barciszewski, J.,Betzel, C. Structure of mistletoe lectin I from Viscum album in complex with the phytohormone zeatin Biochim.Biophys.Acta 2008 1784 1590 1595 2V2P 22561545 Mutant (E53,56,57,60Q and R59M) recombinant horse spleen apoferritin cocrystallized with haemin in acidic conditions 2007-06-06 2008-06-24 De Val, N.,Declercq, J.P.,Lim, C.K.,Crichton, R.R. Structural Analysis of Haemin Demetallation by L-Chain Apoferritins J.Inorg.Biochem. 2012 112 77 0 2V2S 22561545 Mutant R59M recombinant horse spleen apoferritin crystallized in acidic conditions 2007-06-06 2008-06-24 De Val, N.,Declercq, J.P.,Lim, C.K.,Crichton, R.R. Structural Analysis of Haemin Demetallation by L-Chain Apoferritins J.Inorg.Biochem. 2012 112 77 0 2V6N 18559270 Crystal structures of the SARS-coronavirus main proteinase inactivated by benzotriazole compounds 2007-07-19 2008-07-01 Verschueren, K.H.G.,Pumpor, K.,Anemueller, S.,Chen, S.,Mesters, J.R.,Hilgenfeld, R. A Structural View of the Inactivation of the Sars Coronavirus Main Proteinase by Benzotriazole Esters. Chem.Biol. 2008 15 597 0 2QRP 19781947 Glycogen Phosphorylase b in complex with (1R)-3'-(2-naphthyl)-spiro[1,5-anhydro-D-glucitol-1,5'-isoxazoline] 2007-07-28 2008-07-29 Benltifa, M.,Hayes, J.M.,Vidal, S.,Gueyrard, D.,Goekjian, P.G.,Praly, J.P.,Kizilis, G.,Tiraidis, C.,Alexacou, K.M.,Chrysina, E.D.,Zographos, S.E.,Leonidas, D.D.,Archontis, G.,Oikonomakos, N.G. Glucose-based spiro-isoxazolines: a new family of potent glycogen phosphorylase inhibitors. Bioorg.Med.Chem. 2009 17 7368 7380 2QRQ 19781947 Glycogen Phosphorylase b in complex with (1R)-3'-(4-methylphenyl)-spiro[1,5-anhydro-D-glucitol-1,5'-isoxazoline] 2007-07-28 2008-07-29 Benltifa, M.,Hayes, J.M.,Vidal, S.,Gueyrard, D.,Goekjian, P.G.,Praly, J.P.,Kizilis, G.,Tiraidis, C.,Alexacou, K.M.,Chrysina, E.D.,Zographos, S.E.,Leonidas, D.D.,Archontis, G.,Oikonomakos, N.G. Glucose-based spiro-isoxazolines: a new family of potent glycogen phosphorylase inhibitors. Bioorg.Med.Chem. 2009 17 7368 7380 3D0M 18658118 X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex 2008-05-02 2008-09-09 Rypniewski, W.,Adamiak, D.A.,Milecki, J.,Adamiak, R.W. Noncanonical G(syn)-G(anti) base pairs stabilized by sulphate anions in two X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex. Rna 2008 14 1845 1851 2V91 17884630 STRUCTURE OF STRICTOSIDINE SYNTHASE IN COMPLEX WITH STRICTOSIDINE 2007-08-16 2008-09-16 Loris, E.A.,Panjikar, S.,Ruppert, M.,Barleben, L.,Unger, M.,Schubel, H.,Stoeckigt, J. Structure Based Engineering of Strictosidine Synthase: Auxiliary for Alkaloid Libraries Chem.Biol. 2007 14 979 0 2R96 19665595 Crystal structure of E. coli WrbA in complex with FMN 2007-09-12 2008-09-23 Wolfova, J.,Smatanova, I.K.,Brynda, J.,Mesters, J.R.,Lapkouski, M.,Kuty, M.,Natalello, A.,Chatterjee, N.,Chern, S.Y.,Ebbel, E.,Ricci, A.,Grandori, R.,Ettrich, R.,Carey, J. Structural organization of WrbA in apo- and holoprotein crystals. Biochim.Biophys.Acta 2009 1794 1288 1298 2R97 19665595 Crystal structure of E. coli WrbA in complex with FMN 2007-09-12 2008-09-23 Wolfova, J.,Smatanova, I.K.,Brynda, J.,Mesters, J.R.,Lapkouski, M.,Kuty, M.,Natalello, A.,Chatterjee, N.,Chern, S.Y.,Ebbel, E.,Ricci, A.,Grandori, R.,Ettrich, R.,Carey, J. Structural organization of WrbA in apo- and holoprotein crystals. Biochim.Biophys.Acta 2009 1794 1288 1298 2VXM 18782853 Screening a Limited Structure-based Library Identifies UDP-GalNAc- Specific Mutants of alpha-1,3 Galactosyltransferase 2008-07-07 2008-09-23 Tumbale, P.,Jamaluddin, H.,Thiyagarajan, N.,Acharya, K.R.,Brew, K. Screening a Limited Structure-Based Library Identifies Udp-Galnac-Specific Mutants of {Alpha}-1,3-Galactosyltransferase. Glycobiology 2008 18 1036 0 3EHW Human dUTPase in complex with alpha,beta-imido-dUTP and Mg2+: visualization of the full-length C-termini in all monomers and suggestion for an additional metal ion binding site 2008-09-15 2008-09-30 Takacs, E.,Barabas, O.,Vertessy, B.G. Human dUTPase in complex with alpha,beta-imido-dUTP and Mg2+: visualization of the full-length C-termini in all monomers and suggestion for an additional metal ion binding site To be Published 0 0 0 0 3EJF 19177346 Crystal structure of IBV X-domain at pH 8.5 2008-09-18 2008-09-30 Piotrowski, Y.,Hansen, G.,Boomaars-van der Zanden, A.L.,Snijder, E.J.,Gorbalenya, A.E.,Hilgenfeld, R. Crystal structures of the X-domains of a Group-1 and a Group-3 coronavirus reveal that ADP-ribose-binding may not be a conserved property. Protein Sci. 2009 18 6 16 3EKE 19177346 Crystal structure of IBV X-domain at pH 5.6 2008-09-19 2008-09-30 Piotrowski, Y.,Hansen, G.,Boomaars-van der Zanden, A.L.,Snijder, E.J.,Gorbalenya, A.E.,Hilgenfeld, R. Crystal structures of the X-domains of a Group-1 and a Group-3 coronavirus reveal that ADP-ribose-binding may not be a conserved property. Protein Sci. 2009 18 6 16 2VB0 Crystal structure of coxsackievirus B3 proteinase 3C 2007-09-05 2008-10-28 Anand, K.,Mesters, J.R.,Goerlach, R.,Zell, R.,Hilgenfeld, R. Crystal Structure of Coxsackie Virus B3 Proteinase 3C To be Published 0 0 0 0 2VTZ 19016856 Biosynthetic thiolase from Z. ramigera. Complex of the C89A mutant with coenzyme A. 2008-05-19 2008-10-28 Merilainen, G.,Schmitz, W.,Wierenga, R.K.,Kursula, P. The Sulfur Atoms of the Substrate Coa and the Catalytic Cysteine are Required for a Productive Mode of Substrate Binding in Bacterial Biosynthetic Thiolase, a Thioester-Dependent Enzyme. FEBS J. 2008 275 6136 0 2VU2 19016856 Biosynthetic thiolase from Z. ramigera. Complex with S-pantetheine-11- pivalate. 2008-05-19 2008-10-28 Merilainen, G.,Schmitz, W.,Wierenga, R.K.,Kursula, P. The Sulfur Atoms of the Substrate Coa and the Catalytic Cysteine are Required for a Productive Mode of Substrate Binding in Bacterial Biosynthetic Thiolase, a Thioester-Dependent Enzyme. FEBS J. 2008 275 6136 0 3D2H 18953357 Structure of berberine bridge enzyme from Eschscholzia californica, monoclinic crystal form 2008-05-08 2008-10-28 Winkler, A.,Lyskowski, A.,Riedl, S.,Puhl, M.,Kutchan, T.M.,Macheroux, P.,Gruber, K. A concerted mechanism for berberine bridge enzyme Nat.Chem.Biol. 2008 4 739 741 2ZF0 Exploring Thrombin S1 Pocket 2007-12-18 2008-11-04 Baum, B.,Hangauer, D.,Heine, A.,Klebe, G. Exploring Thrombin S1 pocket To be Published 0 0 0 0 3BCR Glycogen Phosphorylase b in complex with AZT 2007-11-13 2008-11-18 Cisma, C.,Sovantzis, D.A.,Hadjiloi, T.,Stathis, D.,Gimisis, T.,Hayes, J.M.,Zographos, S.E.,Leonidas, D.D.,Chrysina, E.D.,Oikonomakos, N.G. D-Glucopyranosyl pyrimidine nucleoside binding to muscle glycogen phosphorylase b To be Published 0 0 0 0 3DCQ 19101469 LECB (PA-LII) in complex with the synthetic ligand 2G0 2008-06-04 2009-01-13 Johansson, E.M.,Crusz, S.A.,Kolomiets, E.,Buts, L.,Kadam, R.U.,Cacciarini, M.,Bartels, K.M.,Diggle, S.P.,Camara, M.,Williams, P.,Loris, R.,Nativi, C.,Rosenau, F.,Jaeger, K.E.,Darbre, T.,Reymond, J.L. Inhibition and dispersion of Pseudomonas aeruginosa biofilms by glycopeptide dendrimers targeting the fucose-specific lectin LecB. Chem.Biol. 2008 15 1249 1257 3E1Z 19143838 Crystal structure of the parasite protesase inhibitor chagasin in complex with papain 2008-08-05 2009-01-27 Redzynia, I.,Ljunggren, A.,Bujacz, A.,Abrahamson, M.,Jaskolski, M.,Bujacz, G. Crystal structure of the parasite inhibitor chagasin in complex with papain allows identification of structural requirements for broad reactivity and specificity determinants for target proteases. Febs J. 2009 276 793 806 3C74 X-ray structure of the uridine phosphorylase from salmonella typhimurium in complex with 2,2'-anhydrouridine at 2.38a resolution 2008-02-06 2009-02-10 Lashkov, A.A.,Mikhailov, A.M. X-ray structure of the uridine phosphorylase from salmonella typhimurium in complex with 2,2'-anhydrouridine at 2.38a resolution To be Published 0 0 0 0 3EOX 19059484 High quality structure of cleaved PAI-1-stab 2008-09-29 2009-02-17 Dewilde, M.,Strelkov, S.V.,Rabijns, A.,Declerck, P.J. High quality structure of cleaved PAI-1-stab. J.Struct.Biol. 2009 165 126 132 3FZA 19158074 Crystal structure of poplar glutaredoxin S12 in complex with glutathione and beta-mercaptoethanol 2009-01-24 2009-02-24 Couturier, J.,Koh, C.S.,Zaffagnini, M.,Winger, A.M.,Gualberto, J.M.,Corbier, C.,Decottignies, P.,Jacquot, J.P.,Lemaire, S.D.,Didierjean, C.,Rouhier, N. Structure-function relationship of the chloroplastic glutaredoxin S12 with an atypical WCSYS active site. J.Biol.Chem. 2009 284 9299 9310 3EPW 19281874 Crystal structure of Trypanosoma vivax nucleoside hydrolase in complex with the inhibitor (2R,3R,4S)-1-[(4-hydroxy-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-2-(hydroxymethyl)pyrrolidin-3,4-diol 2008-09-30 2009-03-24 Versees, W.,Goeminne, A.,Berg, M.,Vandemeulebroucke, A.,Haemers, A.,Augustyns, K.,Steyaert, J. Crystal structures of T. vivax nucleoside hydrolase in complex with new potent and specific inhibitors. Biochim.Biophys.Acta 2009 1794 953 960 3CUW Crystal structure of glycogen phosphorylase b in complex with N-(-D-glucopyranosyl)-N'-(2-naphthyl)oxamides 2008-04-17 2009-04-21 Czifrak, K.,Kyritsi, C.,Felfoldi, N.,Dosca, T.,Gergely, P.,Chrysina, E.D.,Siafaka-Kapadai, A.,Leonidas, D.D.,Zographos, S.E.,Oikonomakos, N.G. Tracking structure activity relationships of glycogen phosphorylase inhibitors: synthesis, kinetic and crystallographic evaluation of analogues of N-(-D-glucopyranosyl)-N'-oxamides To be Published 0 0 0 0 2ZO5 19393666 Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in a complex with azide 2008-05-05 2009-05-05 Polyakov, K.M.,Boyko, K.M.,Tikhonova, T.V.,Slutsky, A.,Antipov, A.N.,Zvyagilskaya, R.A.,Popov, A.N.,Bourenkov, G.P.,Lamzin, V.S.,Popov, V.O. High-resolution structural analysis of a novel octaheme cytochrome c nitrite reductase from the haloalkaliphilic bacterium Thioalkalivibrio nitratireducens J.Mol.Biol. 2009 389 846 862 3EXY 19290553 Crystal structure of the 2[4Fe-4S] ferredoxin V13G variant from allochromatium vinosum 2008-10-17 2009-05-05 Saridakis, E.,Giastas, P.,Efthymiou, G.,Thoma, V.,Moulis, J.M.,Kyritsis, P.,Mavridis, I.M. Insight into the protein and solvent contributions to the reduction potentials of [4Fe-4S]2+/+ clusters: crystal structures of the Allochromatium vinosum ferredoxin variants C57A and V13G and the homologous Escherichia coli ferredoxin. J.Biol.Inorg.Chem. 2009 14 783 799 3D1I 19393666 Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in a complex with nitrite 2008-05-06 2009-05-12 Polyakov, K.M.,Boyko, K.M.,Tikhonova, T.V.,Slutsky, A.,Antipov, A.N.,Zvyagilskaya, R.A.,Popov, A.N.,Bourenkov, G.P.,Lamzin, V.S.,Popov, V.O. High-resolution structural analysis of a novel octaheme cytochrome c nitrite reductase from the haloalkaliphilic bacterium Thioalkalivibrio nitratireducens J.Mol.Biol. 2009 389 846 862 3GLP 19433512 1.23 A resolution X-ray structure of (GCUGCUGC)2 2009-03-12 2009-05-26 Kiliszek, A.,Kierzek, R.,Krzyzosiak, W.J.,Rypniewski, W. Structural insights into CUG repeats containing the 'stretched U-U wobble': implications for myotonic dystrophy. Nucleic Acids Res. 2009 37 4149 4156 2VRI Structure of the NSP3 X-domain of human coronavirus NL63 2008-04-08 2009-06-09 Piotrowski, Y.,Mesters, J.R.,Van Der Hoek, L.,Moll, R.,Hilgenfeld, R. Structure of the Nsp3 X-Domain of Human Coronavirus Nl63 To be Published 0 0 0 0 3DD9 25326388 Structure of DocH66Y dimer 2008-06-05 2009-06-09 De Gieter, S.,Konijnenberg, A.,Talavera, A.,Butterer, A.,Haesaerts, S.,De Greve, H.,Sobott, F.,Loris, R.,Garcia-Pino, A. The intrinsically disordered domain of the antitoxin Phd chaperones the toxin Doc against irreversible inactivation and misfolding J. Biol. Chem. 2014 289 34013 34023 3DIV Crystal structure of laccase from Cerrena maxima at 1.76A resolution 2008-06-21 2009-06-23 Lyashenko, A.V.,Zhukova, Y.N.,Mikhailov, A.M. Crystal Structure of laccase from Cerrena maxima at 1.76A resolution. To be Published 0 0 0 0 3DJO 19643512 Bovine Seminal Ribonuclease uridine 2' phosphate complex 2008-06-24 2009-06-30 Dossi, K.,Tsirkone, V.G.,Hayes, J.M.,Matousek, J.,Pouckova, P.,Soucek, J.,Zadinova, M.,Zographos, S.E.,Leonidas, D.D. Mapping the ribonucleolytic active site of bovine seminal ribonuclease. The binding of pyrimidinyl phosphonucleotide inhibitors Eur.J.Med.Chem. 2009 44 4496 4508 3DJP 19643512 Bovine Seminal Ribonuclease- Uridine 3' phosphate complex 2008-06-24 2009-06-30 Dossi, K.,Tsirkone, V.G.,Hayes, J.M.,Matousek, J.,Pouckova, P.,Soucek, J.,Zadinova, M.,Zographos, S.E.,Leonidas, D.D. Mapping the ribonucleolytic active site of bovine seminal ribonuclease. The binding of pyrimidinyl phosphonucleotide inhibitors Eur.J.Med.Chem. 2009 44 4496 4508 3DJV 19643512 Bovine Seminal Ribonuclease- cytidine 3' phosphate complex 2008-06-24 2009-06-30 Dossi, K.,Tsirkone, V.G.,Hayes, J.M.,Matousek, J.,Pouckova, P.,Soucek, J.,Zadinova, M.,Zographos, S.E.,Leonidas, D.D. Mapping the ribonucleolytic active site of bovine seminal ribonuclease. The binding of pyrimidinyl phosphonucleotide inhibitors Eur.J.Med.Chem. 2009 44 4496 4508 3DJX 19643512 Bovine Seminal Ribonuclease- cytidine 5' phosphate complex 2008-06-24 2009-06-30 Dossi, K.,Tsirkone, V.G.,Hayes, J.M.,Matousek, J.,Pouckova, P.,Soucek, J.,Zadinova, M.,Zographos, S.E.,Leonidas, D.D. Mapping the ribonucleolytic active site of bovine seminal ribonuclease. The binding of pyrimidinyl phosphonucleotide inhibitors Eur.J.Med.Chem. 2009 44 4496 4508 3DPS X-ray structure of the unliganded uridine phosphorylase from salmonella typhimurium in homodimeric form at 1.8A 2008-07-09 2009-07-14 Lashkov, A.A.,Mikhailov, A.M. 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Biochemistry 2010 49 3464 0 2WNI 20392204 Crystal Structure Analysis of Klebsiella sp ASR1 Phytase 2009-07-09 2010-04-28 Bohm, K.,Herter, T.,Mueller, J.J.,Borriss, R.,Heinemann, U. Crystal Structure of Klebsiella Sp. Asr1 Phytase Suggests Substrate Binding to a Preformed Active Site that Meets the Requirements of a Plant Rhizosphere Enzyme. FEBS J. 2010 277 1284 0 2WU0 20392204 Crystal Structure Analysis of Klebsiella sp ASR1 Phytase 2009-09-25 2010-04-28 Bohm, K.,Herter, T.,Mueller, J.J.,Borriss, R.,Heinemann, U. Crystal Structure of Klebsiella Sp. Asr1 Phytase Suggests Substrate Binding to a Preformed Active Site that Meets the Requirements of a Plant Rhizosphere Enzyme. FEBS J. 2010 277 1284 0 2XF2 PVC-AT 2010-05-20 2010-06-16 Borovik, A.,Grebenko, A.I.,Melik-Adamyan, W.R. 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Bioorg.Med.Chem. 2010 18 3413 3425 3L7A 20430629 Crystal Structure of Glycogen Phosphorylase DK2 complex 2009-12-28 2010-10-20 Tsirkone, V.G.,Tsoukala, E.,Lamprakis, C.,Manta, S.,Hayes, J.M.,Skamnaki, V.T.,Drakou, C.,Zographos, S.E.,Komiotis, D.,Leonidas, D.D. 1-(3-Deoxy-3-fluoro-beta-d-glucopyranosyl) pyrimidine derivatives as inhibitors of glycogen phosphorylase b: Kinetic, crystallographic and modelling studies. Bioorg.Med.Chem. 2010 18 3413 3425 3L7B 20430629 Crystal Structure of Glycogen Phosphorylase DK3 complex 2009-12-28 2010-10-20 Tsirkone, V.G.,Tsoukala, E.,Lamprakis, C.,Manta, S.,Hayes, J.M.,Skamnaki, V.T.,Drakou, C.,Zographos, S.E.,Komiotis, D.,Leonidas, D.D. 1-(3-Deoxy-3-fluoro-beta-d-glucopyranosyl) pyrimidine derivatives as inhibitors of glycogen phosphorylase b: Kinetic, crystallographic and modelling studies. Bioorg.Med.Chem. 2010 18 3413 3425 3L7C 20430629 Crystal Structure of Glycogen Phosphorylase DK4 complex 2009-12-28 2010-10-20 Tsirkone, V.G.,Tsoukala, E.,Lamprakis, C.,Manta, S.,Hayes, J.M.,Skamnaki, V.T.,Drakou, C.,Zographos, S.E.,Komiotis, D.,Leonidas, D.D. 1-(3-Deoxy-3-fluoro-beta-d-glucopyranosyl) pyrimidine derivatives as inhibitors of glycogen phosphorylase b: Kinetic, crystallographic and modelling studies. Bioorg.Med.Chem. 2010 18 3413 3425 3L7D 20430629 Crystal Structure of Glycogen Phosphorylase DK5 complex 2009-12-28 2010-10-20 Tsirkone, V.G.,Tsoukala, E.,Lamprakis, C.,Manta, S.,Hayes, J.M.,Skamnaki, V.T.,Drakou, C.,Zographos, S.E.,Komiotis, D.,Leonidas, D.D. 1-(3-Deoxy-3-fluoro-beta-d-glucopyranosyl) pyrimidine derivatives as inhibitors of glycogen phosphorylase b: Kinetic, crystallographic and modelling studies. Bioorg.Med.Chem. 2010 18 3413 3425 3M3X 20889345 Crystal structure of human carbonic anhydrase isozyme II with 4-{2-[N-(6-methoxy-5-nitropyrimidin-4-yl)amino]ethyl}benzenesulfonamide 2010-03-10 2010-10-20 Sudzius, J.,Baranauskiene, L.,Golovenko, D.,Matuliene, J.,Michailoviene, V.,Torresan, J.,Jachno, J.,Sukackaite, R.,Manakova, E.,Grazulis, S.,Tumkevicius, S.,Matulis, D. 4-[N-(Substituted 4-pyrimidinyl)amino]benzenesulfonamides as inhibitors of carbonic anhydrase isozymes I, II, VII, and XIII Bioorg.Med.Chem. 2010 18 7413 7421 3M5E 20889345 Crystal structure of human carbonic anhydrase isozyme II with 4-{[N-(6-chloro-5-formyl-2-methylthiopyrimidin-4-yl)amino]methyl}benzenesulfonamide 2010-03-12 2010-10-20 Sudzius, J.,Baranauskiene, L.,Golovenko, D.,Matuliene, J.,Michailoviene, V.,Torresan, J.,Jachno, J.,Sukackaite, R.,Manakova, E.,Grazulis, S.,Tumkevicius, S.,Matulis, D. 4-[N-(Substituted 4-pyrimidinyl)amino]benzenesulfonamides as inhibitors of carbonic anhydrase isozymes I, II, VII, and XIII Bioorg.Med.Chem. 2010 18 7413 7421 3MHM 20889345 Crystal structure of human carbonic anhydrase isozyme II with 4-{[N-(6-benzylamino-5-nitropyrimidin-4-yl)amino]methyl}benzenesulfonamide 2010-04-08 2010-10-20 Sudzius, J.,Baranauskiene, L.,Golovenko, D.,Matuliene, J.,Michailoviene, V.,Torresan, J.,Jachno, J.,Sukackaite, R.,Manakova, E.,Grazulis, S.,Tumkevicius, S.,Matulis, D. 4-[N-(Substituted 4-pyrimidinyl)amino]benzenesulfonamides as inhibitors of carbonic anhydrase isozymes I, II, VII, and XIII Bioorg.Med.Chem. 2010 18 7413 7421 3MHO 20889345 Crystal structure of human carbonic anhydrase isozyme II with 4-[N-(6-chloro-5-formyl-2-methylthiopyrimidin-4-yl)amino]benzenesulfonamide 2010-04-08 2010-10-20 Sudzius, J.,Baranauskiene, L.,Golovenko, D.,Matuliene, J.,Michailoviene, V.,Torresan, J.,Jachno, J.,Sukackaite, R.,Manakova, E.,Grazulis, S.,Tumkevicius, S.,Matulis, D. 4-[N-(Substituted 4-pyrimidinyl)amino]benzenesulfonamides as inhibitors of carbonic anhydrase isozymes I, II, VII, and XIII Bioorg.Med.Chem. 2010 18 7413 7421 3OFJ 20970431 Crystal structure of N-methyltransferase NodS from Bradyrhizobium japonicum WM9 2010-08-15 2010-10-27 Cakici, O.,Sikorski, M.,Stepkowski, T.,Bujacz, G.,Jaskolski, M. Crystal Structures of NodS N-Methyltransferase from Bradyrhizobium japonicum in Ligand-Free Form and as SAH Complex. J.Mol.Biol. 2010 404 874 889 3M67 20926301 Crystal structure of human carbonic anhydrase isozyme II with 2-chloro-5-[(6,7-dihydro-1H-[1,4]dioxino[2,3-f]benzimidazol-2-ylsulfanyl)acetyl]benzenesulfonamide 2010-03-15 2010-11-03 Capkauskaite, E.,Baranauskiene, L.,Golovenko, D.,Manakova, E.,Grazulis, S.,Tumkevicius, S.,Matulis, D. Indapamide-like benzenesulfonamides as inhibitors of carbonic anhydrases I, II, VII, and XIII Bioorg.Med.Chem. 2010 18 7357 7364 3MRT 20947361 Glycogen phosphorylase complexed with 4-pyridinecarboxaldehyde-4-(beta-D-glucopyranosyl) thiosemicarbazone 2010-04-29 2011-01-05 Alexacou, K.M.,Tenchiu Deleanu, A.C.,Chrysina, E.D.,Charavgi, M.D.,Kostas, I.D.,Zographos, S.E.,Oikonomakos, N.G.,Leonidas, D.D. The binding of beta-D-glucopyranosyl-thiosemicarbazone derivatives to glycogen phosphorylase: a new class of inhibitors Bioorg.Med.Chem. 2010 18 7911 7922 3MTD 20947361 Glycogen phosphorylase complexed with 4-hydroxybenzaldehyde-4-(beta-D-glucopyranosyl)-thiosemicarbazone 2010-04-30 2011-01-05 Alexacou, K.M.,Tenchiu Deleanu, A.C.,Chrysina, E.D.,Charavgi, M.D.,Kostas, I.D.,Zographos, S.E.,Oikonomakos, N.G.,Leonidas, D.D. The binding of beta-D-glucopyranosyl-thiosemicarbazone derivatives to glycogen phosphorylase: a new class of inhibitors Bioorg.Med.Chem. 2010 18 7911 7922 3NC4 20947361 The binding of beta-D-glucopyranosyl-thiosemicarbazone derivatives to glycogen phosphorylase: a new class of inhibitors 2010-06-04 2011-01-05 Alexacou, K.M.,Tenchiu Deleanu, A.C.,Chrysina, E.D.,Charavgi, M.D.,Kostas, I.D.,Zographos, S.E.,Oikonomakos, N.G.,Leonidas, D.D. The binding of beta-D-glucopyranosyl-thiosemicarbazone derivatives to glycogen phosphorylase: a new class of inhibitors Bioorg.Med.Chem. 2010 18 7911 7922 3LGQ 22281743 Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with sulfite (modified Tyr-303) 2010-01-21 2011-02-16 Trofimov, A.A.,Polyakov, K.M.,Tikhonova, T.V.,Tikhonov, A.V.,Safonova, T.N.,Boyko, K.M.,Dorovatovskii, P.V.,Popov, V.O. Covalent modifications of the catalytic tyrosine in octahaem cytochrome c nitrite reductase and their effect on the enzyme activity. Acta Crystallogr.,Sect.D 2012 68 144 153 3M2N 22440859 Crystal structure of human carbonic anhydrase isozyme II with 4-{2-[N-(6-chloro-5-nitropyrimidin-4-yl)amino]ethyl}benzenesulfonamide 2010-03-08 2011-02-16 Capkauskaite, E.,Zubriene, A.,Baranauskiene, L.,Tamulaitiene, G.,Manakova, E.,Kairys, V.,Grazulis, S.,Tumkevicius, S.,Matulis, D. Design of [(2-pyrimidinylthio)acetyl]benzenesulfonamides as inhibitors of human carbonic anhydrases. Eur.J.Med.Chem. 2012 51 259 270 2X6O 21699184 Tet Repressor class D in complex with 7-chlor-2-cyano-iso- tetracycline 2010-02-18 2011-03-02 Volkers, G.,Petruschka, L.,Hinrichs, W. Recognition of Drug Degradation Products by Target Proteins: Isotetracycline Binding to Tet Repressor. J.Med.Chem. 2011 54 5108 0 2Y88 21321225 CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS PHOSPHORIBOSYL ISOMERASE (VARIANT D11N) WITH BOUND PRFAR 2011-02-03 2011-03-02 Due, A.V.,Kuper, J.,Geerlof, A.,Kries, J.P.,Wilmanns, M. Bisubstrate Specificity in Histidine/Tryptophan Biosynthesis Isomerase from Mycobacterium Tuberculosis by Active Site Metamorphosis. Proc.Natl.Acad.Sci.USA 2011 108 3554 0 3M98 Crystal structure of human carbonic anhydrase isozyme II with 5-(1H-benzimidazol-1-ylacetyl)-2-chlorobenzenesulfonamide 2010-03-21 2011-03-02 Capkauskaite, E.,Baranauskiene, L.,Grazulis, S.,Manakova, E.,Golovenko, D.,Matulis, D. Crystal structure of human carbonic anhydrase isozyme II with 5-(1H-benzimidazol-1-ylacetyl)-2-chlorobenzenesulfonamide To be published 0 0 0 0 3M7Q 22975140 Crystal structure of recombinant Kunitz Type serine protease Inhibitor-1 from the Caribbean sea anemone stichodactyla helianthus in complex with bovine pancreatic trypsin 2010-03-17 2011-03-16 Garcia-Fernandez, R.,Pons, T.,Perbandt, M.,Valiente, P.A.,Talavera, A.,Gonzalez-Gonzalez, Y.,Rehders, D.,Chavez, M.A.,Betzel, C.,Redecke, L. Structural insights into serine protease inhibition by a marine invertebrate BPTI Kunitz-type inhibitor. J.Struct.Biol. 2012 180 271 279 2X9D 21699184 Tet repressor (class D) in complex with iso-7-chlortetracycline 2010-03-15 2011-03-23 Volkers, G.,Petruschka, L.,Hinrichs, W. Recognition of Drug Degradation Products by Target Proteins: Isotetracycline Binding to Tet Repressor. J.Med.Chem. 2011 54 5108 0 3M7H 23468636 Crystal structure of the bacteriocin LLPA from Pseudomonas sp. 2010-03-16 2011-03-23 Ghequire, M.G.,Garcia-Pino, A.,Lebbe, E.K.,Spaepen, S.,Loris, R.,De Mot, R. Structural Determinants for Activity and Specificity of the Bacterial Toxin LlpA Plos Pathog. 2013 9 0 0 3M7J 23468636 Crystal structure of the bacteriocin LLPA from pseudomonas sp. in complex with Met-mannose 2010-03-16 2011-03-23 Ghequire, M.G.,Garcia-Pino, A.,Lebbe, E.K.,Spaepen, S.,Loris, R.,De Mot, R. Structural Determinants for Activity and Specificity of the Bacterial Toxin LlpA Plos Pathog. 2013 9 0 0 2XO8 21534527 Crystal Structure of Myosin-2 in Complex with Tribromodichloropseudilin 2010-08-10 2011-05-25 Preller, M.,Chinthalapudi, K.,Martin, R.,Knolker, H.,Manstein, D.J. Inhibition of Myosin ATPase Activity by Halogenated Pseudilins: A Structure-Activity Study. J.Med.Chem. 2011 54 3675 0 3LCY Titin Ig tandem domains A164-A165 2010-01-12 2011-05-25 Chen, Q.,Wilmanns, M. Structural investigation of the Titin A-band tandem Ig domains A164-A165 To be Published 0 0 0 0 2Y24 21501386 STRUCTURAL BASIS FOR SUBSTRATE RECOGNITION BY ERWINIA CHRYSANTHEMI GH5 GLUCURONOXYLANASE 2010-12-13 2011-06-01 Urbanikova, L.,Vrsanska, M.,Krogh, K.B.,Hoff, T.,Biely, P. Structural Basis for Substrate Recognition by Erwinia Chrysanthemi Gh30 Glucuronoxylanase. FEBS J. 2011 278 2105 0 3MEZ X-ray structural analysis of a mannose specific lectin from dutch crocus (crocus vernus) 2010-04-01 2011-06-22 Akrem, A. X-ray structural analysis of a mannose specific lectin from dutch crocus (crocus vernus) To be Published 0 0 0 0 3NW2 21684157 Novel nanomolar Imidazopyridines as selective Nitric Oxide Synthase (iNOS) inhibitors: SAR and structural insights 2010-07-09 2011-06-22 Graedler, U.,Fuchss, T.,Ulrich, W.R.,Boer, R.,Strub, A.,Hesslinger, C.,Anezo, C.,Diederichs, K.,Zaliani, A. Novel nanomolar imidazo[4,5-b]pyridines as selective nitric oxide synthase (iNOS) inhibitors: SAR and structural insights Bioorg.Med.Chem.Lett. 2011 21 4228 4232 3SIM Crystallographic structure analysis of family 18 Chitinase from Crocus vernus 2011-06-19 2011-07-06 Akrem, A.,Iqbal, S.,Buck, F.,Negm, A.,Perbandt, M.,Betzel, C. Crystallographic structure analysis of family 18 Chitinase from Crocus vernus TO BE PUBLISHED 0 0 0 0 3NKT 22155290 Crystal Structure of Salicylate 1,2-dioxygenase from Pseudoaminobacter salicylatoxidans Adducts with naphthoate 2010-06-21 2011-07-13 Ferraroni, M.,Matera, I.,Steimer, L.,Burger, S.,Scozzafava, A.,Stolz, A.,Briganti, F. Crystal structures of salicylate 1,2-dioxygenase-substrates adducts: A step towards the comprehension of the structural basis for substrate selection in class III ring cleaving dioxygenases. J.Struct.Biol. 2012 177 431 438 3NL1 22155290 Crystal Structure of Salicylate 1,2-dioxygenase from Pseudoaminobacter salicylatoxidans Adducts with gentisate 2010-06-21 2011-07-13 Ferraroni, M.,Matera, I.,Steimer, L.,Burger, S.,Scozzafava, A.,Stolz, A.,Briganti, F. Crystal structures of salicylate 1,2-dioxygenase-substrates adducts: A step towards the comprehension of the structural basis for substrate selection in class III ring cleaving dioxygenases. J.Struct.Biol. 2012 177 431 438 3NST 23384287 Crystal Structure of Salicylate 1,2-dioxygenase G106A mutant from Pseudoaminobacter salicylatoxidans 2010-07-02 2011-07-13 Ferraroni, M.,Matera, I.,Burger, S.,Reichert, S.,Steimer, L.,Scozzafava, A.,Stolz, A.,Briganti, F. The salicylate 1,2-dioxygenase as a model for a conventional gentisate 1,2-dioxygenase: crystal structures of the G106A mutant and its adducts with gentisate and salicylate. FEBS J. 2013 280 1643 1652 3NVC 23384287 Crystal Structure of Salicylate 1,2-dioxygenase G106A mutant from Pseudoaminobacter salicylatoxidans in complex with salicylate 2010-07-08 2011-07-13 Ferraroni, M.,Matera, I.,Burger, S.,Reichert, S.,Steimer, L.,Scozzafava, A.,Stolz, A.,Briganti, F. The salicylate 1,2-dioxygenase as a model for a conventional gentisate 1,2-dioxygenase: crystal structures of the G106A mutant and its adducts with gentisate and salicylate. FEBS J. 2013 280 1643 1652 3NW4 23384287 Crystal Structure of Salicylate 1,2-dioxygenase G106A mutant from Pseudoaminobacter salicylatoxidans in complex with gentisate 2010-07-09 2011-07-13 Ferraroni, M.,Matera, I.,Burger, S.,Reichert, S.,Steimer, L.,Scozzafava, A.,Stolz, A.,Briganti, F. The salicylate 1,2-dioxygenase as a model for a conventional gentisate 1,2-dioxygenase: crystal structures of the G106A mutant and its adducts with gentisate and salicylate. FEBS J. 2013 280 1643 1652 3S7W Structure of the TvNiRb form of Thioalkalivibrio nitratireducens cytochrome c nitrite reductase with an oxidized Gln360 in a complex with hydroxylamine 2011-05-27 2011-07-27 Trofimov, A.A.,Polyakov, K.M.,Tikhonova, T.V.,Popov, V.O. Structure of the TvNiRb form of Thioalkalivibrio nitratireducens cytochrome c nitrite reductase with an oxidized Gln360 in a complex with hydroxylamine To be Published 0 0 0 0 2XSL 21114959 The crystal structure of a Thermus thermophilus tRNAGly acceptor stem microhelix at 1.6 Angstroem resolution 2010-10-29 2011-08-10 Oberthur, D.,Eichert, A.,Erdmann, V.A.,Furste, J.P.,Betzel, C.,Forster, C. The Crystal Structure of a Thermus Thermophilus tRNA(Gly) Acceptor Stem Microhelix at 1.6 A Resolution. Biochem.Biophys.Res.Commun. 2011 404 245 0 3O5Z 22102226 Crystal structure of the SH3 domain from p85beta subunit of phosphoinositide 3-kinase (PI3K) 2010-07-28 2011-08-10 Chen, S.,Xiao, Y.,Ponnusamy, R.,Tan, J.,Lei, J.,Hilgenfeld, R. X-ray structure of the SH3 domain of the phosphoinositide 3-kinase p85 beta subunit Acta Crystallogr.,Sect.F 2011 67 1328 1333 2Y6P 21826242 Evidence for a Two-Metal-Ion-Mechanism in the Kdo- Cytidylyltransferase KdsB 2011-01-25 2011-08-24 Schmidt, H.,Mesters, J.R.,Wu, J.,Woodard, R.W.,Hilgenfeld, R.,Mamat, U. Evidence for a Two-Metal-Ion Mechanism in the Cytidyltransferase Kdsb, an Enzyme Involved in Lipopolysaccharide Biosynthesis. Plos One 2011 6 23231 0 3OND 22349223 Crystal structure of Lupinus luteus S-adenosyl-L-homocysteine hydrolase in complex with adenosine 2010-08-28 2011-08-31 Brzezinski, K.,Dauter, Z.,Jaskolski, M. High-resolution structures of complexes of plant S-adenosyl-L-homocysteine hydrolase (Lupinus luteus). Acta Crystallogr.,Sect.D 2012 68 218 231 3ONE 22349223 Crystal structure of Lupinus luteus S-adenosyl-L-homocysteine hydrolase in complex with adenine 2010-08-28 2011-08-31 Brzezinski, K.,Dauter, Z.,Jaskolski, M. High-resolution structures of complexes of plant S-adenosyl-L-homocysteine hydrolase (Lupinus luteus). Acta Crystallogr.,Sect.D 2012 68 218 231 2XPV TetR(D) in complex with minocycline and magnesium. 2010-08-30 2011-09-07 Dalm, D.,Palm, G.J.,Proft, J.,Hinrichs, W. Tetr(D) in Complex with Minocycline. To be Published 0 0 0 0 3SNA 21854807 Crystal structure of SARS coronavirus main protease complexed with Ac-NSFSQ-H (soaking) 2011-06-29 2011-09-07 Zhu, L.,George, S.,Schmidt, M.F.,Al-Gharabli, S.I.,Rademann, J.,Hilgenfeld, R. Peptide aldehyde inhibitors challenge the substrate specificity of the SARS-coronavirus main protease. Antiviral Res. 2011 92 204 212 3SNB 21854807 Crystal structure of SARS coronavirus main protease complexed with Ac-DSFDQ-H (soaking) 2011-06-29 2011-09-07 Zhu, L.,George, S.,Schmidt, M.F.,Al-Gharabli, S.I.,Rademann, J.,Hilgenfeld, R. Peptide aldehyde inhibitors challenge the substrate specificity of the SARS-coronavirus main protease. Antiviral Res. 2011 92 204 212 3SNC 21854807 Crystal structure of SARS coronavirus main protease complexed with Ac-NSTSQ-H (soaking) 2011-06-29 2011-09-07 Zhu, L.,George, S.,Schmidt, M.F.,Al-Gharabli, S.I.,Rademann, J.,Hilgenfeld, R. Peptide aldehyde inhibitors challenge the substrate specificity of the SARS-coronavirus main protease. Antiviral Res. 2011 92 204 212 3SND 21854807 Crystal structure of SARS coronavirus main protease complexed with Ac-ESTLQ-H (cocrystallization) 2011-06-29 2011-09-07 Zhu, L.,George, S.,Schmidt, M.F.,Al-Gharabli, S.I.,Rademann, J.,Hilgenfeld, R. Peptide aldehyde inhibitors challenge the substrate specificity of the SARS-coronavirus main protease. Antiviral Res. 2011 92 204 212 3SNE 21854807 Crystal structure of SARS coronavirus main protease complexed with Ac-ESTLQ-H (Soaking) 2011-06-29 2011-09-07 Zhu, L.,George, S.,Schmidt, M.F.,Al-Gharabli, S.I.,Rademann, J.,Hilgenfeld, R. Peptide aldehyde inhibitors challenge the substrate specificity of the SARS-coronavirus main protease. Antiviral Res. 2011 92 204 212 3O5W 22064121 Binding of kinetin in the active site of mistletoe lectin I 2010-07-28 2011-09-14 Malecki, P.H.,Rypniewski, W.,Szymanski, M.,Barciszewski, J.,Meyer, A. Binding of the plant hormone kinetin in the active site of Mistletoe Lectin I from Viscum album. Biochim.Biophys.Acta 2012 1824 334 338 3SQF 21926992 Crystal structure of monomeric M-PMV retroviral protease 2011-07-05 2011-09-21 Khatib, F.,DiMaio, F.,Cooper, S.,Kazmierczyk, M.,Gilski, M.,Krzywda, S.,Zabranska, H.,Pichova, I.,Thompson, J.,Popovic, Z.,Jaskolski, M.,Baker, D. Crystal structure of a monomeric retroviral protease solved by protein folding game players. Nat.Struct.Mol.Biol. 2011 18 1175 1177 3TP1 Crystal Structure of the precatalytic M-PMV dUTPase - substrate (dUPNPP) complex 2011-09-07 2011-09-21 Barabas, O.,Nemeth, V.,Bodor, A.,Perczel, A.,Rosta, E.,Kele, Z.,Zagyva, I.,Szabadka, Z.,Grolmusz, V.I.,Wilmanns, M.,Vertessy, B.G. Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize In-line Attack and Inversion To be Published 0 0 0 0 3TPW CRYSTAL STRUCTURE OF M-PMV DUTPASE - DUPNPP complex revealing distorted ligand geometry (approach intermediate) 2011-09-08 2011-10-05 Barabas, O.,Nemeth, V.,Bodor, A.,Perczel, A.,Rosta, E.,Kele, Z.,Zagyva, I.,Szabadka, Z.,Grolmusz, V.I.,Wilmanns, M.,Vertessy, B.G. Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize In-line Attack and Inversion to be published 0 0 0 0 3TPY Crystal structure of M-PMV dUTPase with a mixed population of substrate (dUPNPP) and post-inversion product (dUMP) in the active sites 2011-09-08 2011-10-12 Barabas, O.,Nemeth, V.,Bodor, A.,Perczel, A.,Rosta, E.,Kele, Z.,Zagyva, I.,Szabadka, Z.,Grolmusz, V.I.,Wilmanns, M.,Vertessy, B.G. Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize In-line Attack and Inversion to be published 0 0 0 0 3TRN Crystal structure of M-PMV dUTPASE post-inversion product (dUMP) complex 2011-09-09 2011-10-12 Barabas, O.,Nemeth, V.,Bodor, A.,Perczel, A.,Rosta, E.,Kele, Z.,Zagyva, I.,Szabadka, Z.,Grolmusz, V.I.,Wilmanns, M.,Vertessy, B.G. Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize in-Line Attack and Inversion To be Published 0 0 0 0 3TS6 Crystal structure of M-PMV DUTPASE relaxed end-product (dUMP) complex 2011-09-12 2011-10-12 Barabas, O.,Nemeth, V.,Bodor, A.,Perczel, A.,Rosta, E.,Kele, Z.,Zagyva, I.,Szabadka, Z.,Grolmusz, V.I.,Wilmanns, M.,Vertessy, B.G. Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize in-Line Attack and Inversion To be Published 0 0 0 0 3TSL Crystal structure of M-PMV DUTPASE relaxed end-product (dUMP) complex 2011-09-13 2011-10-12 Barabas, O.,Nemeth, V.,Bodor, A.,Perczel, A.,Rosta, E.,Kele, Z.,Zagyva, I.,Szabadka, Z.,Grolmusz, V.I.,Wilmanns, M.,Vertessy, B.G. Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize in-Line Attack and Inversion To be Published 0 0 0 0 3TW2 22869114 High resolution structure of human histidine triad nucleotide-binding protein 1 (hHINT1)/AMP complex in a monoclinic space group 2011-09-21 2011-11-02 Dolot, R.,Ozga, M.,Wlodarczyk, A.,Krakowiak, A.,Nawrot, B. A new crystal form of human histidine triad nucleotide-binding protein 1 (hHINT1) in complex with adenosine 5'-monophosphate at 1.38 A resolution. Acta Crystallogr.,Sect.F 2012 68 883 888 3RKR 22046268 Crystal structure of a metagenomic short-chain oxidoreductase (SDR) in complex with NADP 2011-04-18 2011-11-30 Bijtenhoorn, P.,Mayerhofer, H.,Muller-Dieckmann, J.,Utpatel, C.,Schipper, C.,Hornung, C.,Szesny, M.,Grond, S.,Thurmer, A.,Brzuszkiewicz, E.,Daniel, R.,Dierking, K.,Schulenburg, H.,Streit, W.R. A novel metagenomic short-chain dehydrogenase/reductase attenuates Pseudomonas aeruginosa biofilm formation and virulence on Caenorhabditis elegans. Plos One 2011 6 0 0 3SE6 22106953 Crystal structure of the human Endoplasmic Reticulum Aminopeptidase 2 2011-06-10 2011-12-21 Birtley, J.R.,Saridakis, E.,Stratikos, E.,Mavridis, I.M. The crystal structure of human endoplasmic reticulum aminopeptidase 2 reveals the atomic basis for distinct roles in antigen processing. Biochemistry 2012 51 286 295 3SSF 22281746 Crystal structure of RNA:DNA dodecamer corresponding to HIV-1 polypurine tract, at 1.6 A resolution. 2011-07-08 2012-02-08 Drozdzal, P.,Michalska, K.,Kierzek, R.,Lomozik, L.,Jaskolski, M. Structure of an RNA/DNA dodecamer corresponding to the HIV-1 polypurine tract at 1.6 Angstrom resolution Acta Crystallogr.,Sect.D 2012 68 169 175 3V3Z 22365928 I(L177)H mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides 2011-12-14 2012-03-14 Vasilieva, L.G.,Fufina, T.Y.,Gabdulkhakov, A.G.,Leonova, M.M.,Khatypov, R.A.,Shuvalov, V.A. The site-directed mutation I(L177)H in Rhodobacter sphaeroides reaction center affects coordination of P(A) and B(B) bacteriochlorophylls. Biochim.Biophys.Acta 2012 1817 1407 1417 2YCD 22496785 Structure of a novel Glutathione Transferase from Agrobacterium tumefaciens. 2011-03-13 2012-03-28 Skopelitou, K.,Dhavala, P.,Papageorgiou, A.C.,Labrou, N.E. A Glutathione Transferase from Agrobacterium Tumefaciens Reveals a Novel Class of Bacterial Gst Superfamily. Plos One 2012 7 34263 0 3T6J 22493238 Structure of human DPPIII in complex with the opioid peptide Tynorphin, at 3.0 Angstroms 2011-07-28 2012-04-04 Bezerra, G.A.,Dobrovetsky, E.,Viertlmayr, R.,Dong, A.,Binter, A.,Abramic, M.,Macheroux, P.,Dhe-Paganon, S.,Gruber, K. Entropy-driven binding of opioid peptides induces a large domain motion in human dipeptidyl peptidase III. Proc.Natl.Acad.Sci.USA 2012 109 6525 6530 3SAX 22440859 Crystal structure of human carbonic anhydrase isozyme II with 2-chloro-5-{[(5-ethyl-2-pyrimidinyl)sulfanyl]acetyl}benzenesulfonamide 2011-06-03 2012-04-11 Capkauskaite, E.,Zubriene, A.,Baranauskiene, L.,Tamulaitiene, G.,Manakova, E.,Kairys, V.,Grazulis, S.,Tumkevicius, S.,Matulis, D. Design of [(2-pyrimidinylthio)acetyl]benzenesulfonamides as inhibitors of human carbonic anhydrases. Eur.J.Med.Chem. 2012 51 259 270 3SBI 22440859 Crystal structure of human carbonic anhydrase isozyme II with 4-[(2-pyrimidinylsulfanyl)acetyl]benzenesulfonamide 2011-06-05 2012-04-11 Capkauskaite, E.,Zubriene, A.,Baranauskiene, L.,Tamulaitiene, G.,Manakova, E.,Kairys, V.,Grazulis, S.,Tumkevicius, S.,Matulis, D. Design of [(2-pyrimidinylthio)acetyl]benzenesulfonamides as inhibitors of human carbonic anhydrases. Eur.J.Med.Chem. 2012 51 259 270 3UX7 22362132 Crystal structure of a dimeric myotoxic component of the Vipera ammodytes meridionalis venom reveals determinants of myotoxicity and membrane damaging activity 2011-12-04 2012-04-25 Georgieva, D.,Coronado, M.,Oberthur, D.,Buck, F.,Duhalov, D.,Arni, R.K.,Betzel, C. Crystal structure of a dimeric Ser49 PLA(2)-like myotoxic component of the Vipera ammodytes meridionalis venomics reveals determinants of myotoxicity and membrane damaging activity. Mol Biosyst 2012 8 1405 1411 3RLI 22561231 Crystal structure of monoacylglycerol lipase from Bacillus sp. H257 in complex with PMSF 2011-04-19 2012-05-23 Rengachari, S.,Bezerra, G.A.,Riegler-Berket, L.,Gruber, C.C.,Sturm, C.,Taschler, U.,Boeszoermenyi, A.,Dreveny, I.,Zimmermann, R.,Gruber, K.,Oberer, M. The structure of monoacylglycerol lipase from Bacillus sp. H257 reveals unexpected conservation of the cap architecture between bacterial and human enzymes. Biochim.Biophys.Acta 2012 1821 1012 1021 4AO4 22745123 Structural Determinants of the beta-Selectivity of a Bacterial Aminotransferase 2012-03-23 2012-06-06 Wybenga, G.G.,Crismaru, C.G.,Janssen, D.B.,Dijkstra, B.W. Structural determinants of the beta-selectivity of a bacterial aminotransferase. J. Biol. Chem. 2012 287 28495 28502 4F14 23985323 Structure of the SH3 domain of human nebulette in complex with a peptide of XIRP2 2012-05-06 2012-06-20 Eulitz, S.,Sauer, F.,Pelissier, M.C.,Boisguerin, P.,Molt, S.,Schuld, J.,Orfanos, Z.,Kley, R.A.,Volkmer, R.,Wilmanns, M.,Kirfel, G.,van der Ven, P.F.,Furst, D.O. Identification of Xin-repeat proteins as novel ligands of the SH3 domains of nebulin and nebulette and analysis of their interaction during myofibril formation and remodeling. Mol Biol Cell 2013 24 3215 3226 4A2Y 22579681 STRUCTURE OF THE HUMAN EOSINOPHIL CATIONIC PROTEIN IN COMPLEX WITH CITRATE ANIONS 2011-09-29 2012-06-27 Boix, E.,Pulido, D.,Moussaoui, M.,Nogues, V.,Russi, S. The Sulfate-Binding Site Structure of the Human Eosinophil Cationic Protein as Revealed by a New Crystal Form. J.Struct.Biol. 2012 179 1 0 3ZSC Catalytic function and substrate recognition of the pectate lyase from Thermotoga maritima 2011-06-24 2012-07-11 McDonough, M.A.,Thymark, M.,Frisner, H.,Hotchkiss, A.,Sonksen, C.,Bjornvad, M.,Johansen, K.S.,Larsen, S. Catalytic Function and Substrate Recognition of the Pectate Lyase from Thermotoga Maritima To be Published 0 0 0 0 3U7B 22751658 A new crystal structure of a Fusarium oxysporum GH10 xylanase reveals the presence of an extended loop on top of the catalytic cleft 2011-10-13 2012-07-18 Dimarogona, M.,Topakas, E.,Christakopoulos, P.,Chrysina, E.D. The structure of a GH10 xylanase from Fusarium oxysporum reveals the presence of an extended loop on top of the catalytic cleft. Acta Crystallogr.,Sect.D 2012 68 735 742 4EL5 22770609 Crystal structure of GPb in complex with DK12 2012-04-10 2012-07-25 Kantsadi, A.L.,Manta, S.,Psarra, A.M.,Dimopoulou, A.,Kiritsis, C.,Parmenopoulou, V.,Skamnaki, V.T.,Zoumpoulakis, P.,Zographos, S.E.,Leonidas, D.D.,Komiotis, D. The binding of C5-alkynyl and alkylfurano[2,3-d]pyrimidine glucopyranonucleosides to glycogen phosphorylase b: Synthesis, biochemical and biological assessment. Eur.J.Med.Chem. 2012 54 740 749 3T62 Crystal structure of recombinant Kunitz Type serine protease Inhibitor-1 from the Caribbean Sea anemone Stichodactyla helianthus in complex with bovine chymotrypsin 2011-07-28 2012-08-01 Garcia-Fernandez, R.,Dominguez, R.,Oberthuer, D.,Pons, T.,Gonzalez-Gonzalez, Y.,Chavez, M.A.,Betzel, C.,Redecke, L. Structural insights into chymotrypsin inhibition by the Kunitz-type inhibitor-1 from the marine invertebrate Stichodactyla helianthus To be Published 0 0 0 0 3TCJ 23289531 CcdB dimer from V. fisheri in complex with one C-terminal domain of F-plasmid CcdA 2011-08-09 2012-08-15 Drobnak, I.,De Jonge, N.,Haesaerts, S.,Vesnaver, G.,Loris, R.,Lah, J. Energetic basis of uncoupling folding from binding for an intrinsically disordered protein. J.Am.Chem.Soc. 2013 135 1288 1294 4FAG 22960182 Crystal Structure of the Salicylate 1,2-dioxygenase from Pseudoaminobacter salicylatoxidans W104Y mutant in complex with gentisate 2012-05-22 2012-09-26 Ferraroni, M.,Steimer, L.,Matera, I.,Burger, S.,Scozzafava, A.,Stolz, A.,Briganti, F. The generation of a 1-hydroxy-2-naphthoate 1,2-dioxygenase by single point mutations of salicylate 1,2-dioxygenase - Rational design of mutants and the crystal structures of the A85H and W104Y variants. J.Struct.Biol. 2012 180 563 571 4FAH 22960182 Crystal Structure of the Salicylate 1,2-dioxygenase from Pseudoaminobacter salicylatoxidans A85H mutant 2012-05-22 2012-09-26 Ferraroni, M.,Steimer, L.,Matera, I.,Burger, S.,Scozzafava, A.,Stolz, A.,Briganti, F. The generation of a 1-hydroxy-2-naphthoate 1,2-dioxygenase by single point mutations of salicylate 1,2-dioxygenase - Rational design of mutants and the crystal structures of the A85H and W104Y variants. J.Struct.Biol. 2012 180 563 571 4FQF 22988236 Crystal structure of a thionitrate intermediate of human aldehyde dehydrogenase-2 2012-06-25 2012-09-26 Lang, B.S.,Gorren, A.C.,Oberdorfer, G.,Wenzl, M.V.,Furdui, C.M.,Poole, L.B.,Mayer, B.,Gruber, K. Vascular Bioactivation of Nitroglycerin by Aldehyde Dehydrogenase-2: REACTION INTERMEDIATES REVEALED BY CRYSTALLOGRAPHY AND MASS SPECTROMETRY. J.Biol.Chem. 2012 287 38124 38134 3ZR4 23261602 STRUCTURAL EVIDENCE FOR AMMONIA TUNNELING ACROSS THE (BETA-ALPHA)8 BARREL OF THE IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE BIENZYME COMPLEX 2011-06-13 2012-10-03 List, F.,Vega, M.C.,Razeto, A.,Hager, M.C.,Sterner, R.,Wilmanns, M. Catalysis Uncoupling in a Glutamine Amidotransferase Bienzyme by Unblocking the Glutaminase Active Site. Chem.Biol. 2012 19 1589 0 4F5T 22993082 Crystal Structure of Equine Serum Albumin 2012-05-13 2012-10-03 Bujacz, A. Structures of bovine, equine and leporine serum albumin. Acta Crystallogr.,Sect.D 2012 68 1278 1289 4AAL 22417533 MacA wild-type oxidized 2011-12-05 2012-10-17 Seidel, J.,Hoffmann, M.,Ellis, K.E.,Seidel, A.,Spatzal, T.,Gerhardt, S.,Elliott, S.J.,Einsle, O. Maca is a Second Cytochrome C Peroxidase of Geobacter Sulfurreducens. Biochemistry 2012 51 2747 0 4F91 23045696 Brr2 Helicase Region 2012-05-18 2012-10-17 Santos, K.F.,Jovin, S.M.,Weber, G.,Pena, V.,Luhrmann, R.,Wahl, M.C. Structural basis for functional cooperation between tandem helicase cassettes in Brr2-mediated remodeling of the spliceosome. Proc.Natl.Acad.Sci.USA 2012 109 17418 17423 3U7R 24817153 FerB - flavoenzyme NAD(P)H:(acceptor) oxidoreductase (FerB) from Paracoccus denitrificans 2011-10-14 2012-10-24 Sedlacek, V.,Klumpler, T.,Marek, J.,Kucera, I. The Structural and Functional Basis of Catalysis Mediated by NAD(P)H:acceptor Oxidoreductase (FerB) of Paracoccus denitrificans. Plos One 2014 9 0 0 4H9M The first Jack bean urease (Canavalia ensiformis) complex obtained at 1.52 resolution 2012-09-24 2012-10-24 Begum, A.,Choudhary, M.I.,Betzel, C. The first Jack bean urease (Canavalia ensiformis) complex obtained at 1.52 resolution TO BE PUBLISHED 0 0 0 0 3UOU 25878249 Crystal structure of the Kunitz-type protease inhibitor ShPI-1 Lys13Leu mutant in complex with pancreatic elastase 2011-11-17 2012-11-21 Garcia-Fernandez, R.,Perbandt, M.,Rehders, D.,Ziegelmuller, P.,Piganeau, N.,Hahn, U.,Betzel, C.,Chavez, M.A.,Redecke, L. Three-dimensional Structure of a Kunitz-type Inhibitor in Complex with an Elastase-like Enzyme. J.Biol.Chem. 2015 290 14154 14165 4FN6 Structural Characterization of Thiaminase type II TenA from Staphylococcus aureus 2012-06-19 2012-12-19 Begum, A.,Drebes, J.,Perbandt, M.,Wrenger, C.,Betzel, C. Structural Characterization of Thiaminase type II TenA from Staphylococcus aureus TO BE PUBLISHED 0 0 0 0 4G4G 23275164 Crystal structure of recombinant glucuronoyl esterase from Sporotrichum thermophile determined at 1.55 A resolution 2012-07-16 2013-01-02 Charavgi, M.D.,Dimarogona, M.,Topakas, E.,Christakopoulos, P.,Chrysina, E.D. The structure of a novel glucuronoyl esterase from Myceliophthora thermophila gives new insights into its role as a potential biocatalyst. Acta Crystallogr.,Sect.D 2013 69 63 73 4ATL 22704651 Crystal structure of Raucaffricine glucosidase in complex with Glucose 2012-05-08 2013-01-30 Xia, L.,Rajendran, C.,Ruppert, M.,Panjikar, S.,Wang, M.,Stoeckigt, J. High Speed X-Ray Analysis of Plant Enzymes at Room Temperature Phytochemistry 2013 91 88 0 4EB2 Crystal structure Mistletoe Lectin I from Viscum album in complex with n-acetyl-d-glucosamine at 1.94 A resolution. 2012-03-23 2013-03-27 Laskov, A.A.,Prokofev, I.I.,Gabdoulkhakov, A.G.,Betzel, C.,Mikhailov, A.M. Crystal structure Mistletoe Lectin I from Viscum album in complex with N-acetyl-D-glucosamine at 1.94 A resolution. To be Published 0 0 0 0 4EIF Crystal structure of cytochrome c6C L50Q mutant from Synechococcus sp. PCC 7002 2012-04-05 2013-04-10 Bialek, W.,Krzywda, S.,Zatwarnicki, P.,Jaskolski, M.,Szczepaniak, A. Cytochrome c6 and c6C from Synechococcus sp. PCC 7002 - structure and function. To be Published 0 0 0 0 4GC1 23468636 Crystal structure of the bacteriocin LLPA from pseudomonas sp. in complex with Man alpha(1-2)Man 2012-07-29 2013-04-10 Ghequire, M.G.,Garcia-Pino, A.,Lebbe, E.K.,Spaepen, S.,Loris, R.,De Mot, R. Structural Determinants for Activity and Specificity of the Bacterial Toxin LlpA. Plos Pathog. 2013 9 0 0 4GC2 23468636 Crystal structure of the bacteriocin LLPA from pseudomonas sp. in complex with GlcNAc beta(1-2)Man alpha(1-3)[GlcNAc beta(1-2)Man alpha(1-6)]Man 2012-07-29 2013-04-10 Ghequire, M.G.,Garcia-Pino, A.,Lebbe, E.K.,Spaepen, S.,Loris, R.,De Mot, R. Structural Determinants for Activity and Specificity of the Bacterial Toxin LlpA. Plos Pathog. 2013 9 0 0 4HT2 23394791 Crystal structure of human carbonic anhydrase isozyme XII with the inhibitor. 2012-10-31 2013-04-10 Dudutiene, V.,Zubriene, A.,Smirnov, A.,Gylyte, J.,Timm, D.,Manakova, E.,Grazulis, S.,Matulis, D. 4-Substituted-2,3,5,6-tetrafluorobenzenesulfonamides as inhibitors of carbonic anhydrases I, II, VII, XII, and XIII. Bioorg.Med.Chem. 2013 21 2093 2106 4K0O 24833052 F17b-G lectin domain with bound GlcNAc(beta1-3)Gal 2013-04-04 2013-04-17 Lonardi, E.,Moonens, K.,Buts, L.,de Boer, A.R.,Olsson, J.D.,Weiss, M.S.,Fabre, E.,Guerardel, Y.,Deelder, A.M.,Oscarson, S.,Wuhrer, M.,Bouckaert, J. Structural Sampling of Glycan Interaction Profiles Reveals Mucosal Receptors for Fimbrial Adhesins of Enterotoxigenic Escherichia coli Biology (Basel) 2013 2 894 917 4AZK 23633589 Structural basis of L-phosphoserine binding to Bacillus alcalophilus phosphoserine aminotransferase 2012-06-26 2013-05-01 Battula, P.,Dubnovitsky, A.P.,Papageorgiou, A.C. Structural Basis of L-Phosphoserine Binding to Bacillus Alcalophilus Phosphoserine Aminotransferase Acta Crystallogr.,Sect.D 2013 69 804 0 4HGF 23589805 Crystal structure of P450 BM3 5F5K heme domain variant complexed with styrene 2012-10-08 2013-05-01 Shehzad, A.,Panneerselvam, S.,Linow, M.,Bocola, M.,Roccatano, D.,Mueller-Dieckmann, J.,Wilmanns, M.,Schwaneberg, U. P450 BM3 crystal structures reveal the role of the charged surface residue Lys/Arg184 in inversion of enantioselective styrene epoxidation. Chem.Commun.(Camb.) 2013 49 4694 4696 4HGH 23589805 Crystal structure of P450 BM3 5F5 heme domain variant complexed with styrene (dataset I) 2012-10-08 2013-05-01 Shehzad, A.,Panneerselvam, S.,Linow, M.,Bocola, M.,Roccatano, D.,Mueller-Dieckmann, J.,Wilmanns, M.,Schwaneberg, U. P450 BM3 crystal structures reveal the role of the charged surface residue Lys/Arg184 in inversion of enantioselective styrene epoxidation. Chem.Commun.(Camb.) 2013 49 4694 4696 4HGI 23589805 Crystal structure of P450 BM3 5F5 heme domain variant complexed with styrene (dataset II) 2012-10-08 2013-05-01 Shehzad, A.,Panneerselvam, S.,Linow, M.,Bocola, M.,Roccatano, D.,Mueller-Dieckmann, J.,Wilmanns, M.,Schwaneberg, U. P450 BM3 crystal structures reveal the role of the charged surface residue Lys/Arg184 in inversion of enantioselective styrene epoxidation. Chem.Commun.(Camb.) 2013 49 4694 4696 4HGJ 23589805 Crystal structure of P450 BM3 5F5 heme domain variant 2012-10-08 2013-05-01 Shehzad, A.,Panneerselvam, S.,Linow, M.,Bocola, M.,Roccatano, D.,Mueller-Dieckmann, J.,Wilmanns, M.,Schwaneberg, U. P450 BM3 crystal structures reveal the role of the charged surface residue Lys/Arg184 in inversion of enantioselective styrene epoxidation. Chem.Commun.(Camb.) 2013 49 4694 4696 4I8A 23589421 Alanine-glyoxylate aminotransferase variant S187F 2012-12-03 2013-05-01 Oppici, E.,Fodor, K.,Paiardini, A.,Williams, C.,Voltattorni, C.B.,Wilmanns, M.,Cellini, B. Crystal structure of the S187F variant of human liver alanine: Aminotransferase associated with primary hyperoxaluria type I and its functional implications. Proteins 2013 81 1457 1465 4AWT Crystal structure of the reduced Shewanella Yellow Enzyme 1 (SYE1) M25L mutant 2012-06-05 2013-06-26 Elegheert, J.,Pauwels, E.,Wille, G.,Brige, A.,Savvides, S.N. Modulation of Isoalloxazine Ring Planarity Influences Fmn Electronic Properties in Old Yellow Enzymes To be Published 0 0 0 0 4BWF 23896733 Pex4p-Pex22p disulphide bond mutant 2013-07-01 2013-07-17 Williams, C.,van den Berg, M.,Stanley, W.A.,Wilmanns, M.,Distel, B. A Disulphide Bond in the E2 Enzyme Pex4P Modulates Ubiquitin-Conjugating Activity Sci.Rep. 2013 3 2212 0 4B1R Tetracycline repressor class D mutant H100A in complex with iso-7- Chlortetracycline 2012-07-12 2013-07-24 Eltschkner, S.,Palm, G.J.,Schneider, J.,Hinrichs, W. Tetracycline Repressor Class D Mutant H100A in Complex with Iso-7-Chlortetracycline To be Published 0 0 0 0 4G8J X-ray Structure of Uridine Phosphorylease from Vibrio cholerae Complexed with Thymidine at 2.12 A Resolution 2012-07-23 2013-07-24 Lashkov, A.A.,Gabdoulkhakov, A.G.,Prokofev, I.I.,Sotnichenko, S.E.,Betzel, C.,Mikhailov, A.M. X-ray structure of uridine phosphorylease from Vibrio cholerae complexed with thymidine To be Published 0 0 0 0 4FYU Crystal structure of Thioredoxin from Wuchereria bancrofti at 2.0 Angstrom 2012-07-05 2013-08-07 Nasser, Y.,Prabhu, P.,Ahmed, A.,Iqbal, S.,Betzel, C. Crystal structure of Thioredoxin from Wuchereria bancrofti at 2.0 Angstrom TO BE PUBLISHED 0 0 0 0 4I60 23603015 Crystal structure of avidin - biotinylruthenocene complex 2012-11-29 2013-08-14 Strzelczyk, P.,Bujacz, A.,Plazuk, D.,Zakrzewski, J.,Bujacz, G. Structural investigation of the interactions of biotinylruthenocene with avidin. Chem.Biol.Interact 2013 204 6 12 4H1T X-RAY Structure of the Complex VchUPh with Phosphate ion at 1.92A Resolution. 2012-09-11 2013-09-11 Prokofev, I.I.,Lashkov, A.A.,Gabdoulkhakov, A.G.,Sotnichenko, S.E.,Betzel, C.,Mikhailov, A.M. X-RAY Structure of the Complex VchUPh with Phosphate ion at 1.92A Resolution. TO BE PUBLISHED 0 0 0 0 4BRS 24007310 Structure of wild type PhaZ7 PHB depolymerase 2013-06-05 2013-09-18 Jendrossek, D.,Hermawan, S.,Subedi, B.,Papageorgiou, A.C. Biochemical Analysis and Structure Determination of Paucimonas Lemoignei Poly(3-Hydroxybutyrate) (Phb) Depolymerase Phaz7 Muteins Reveal the Phb Binding Site and Details of Substrate-Enzyme Interactions. Mol.Microbiol. 2013 90 649 0 4BTV 24007310 Structure of PhaZ7 PHB depolymerase in complex with 3HB trimer 2013-06-19 2013-09-18 Jendrossek, D.,Hermawan, S.,Subedi, B.,Papageorgiou, A.C. Biochemical Analysis and Structure Determination of Paucimonas Lemoignei Poly(3-Hydroxybutyrate) (Phb) Depolymerase Phaz7 Muteins Reveal the Phb Binding Site and Details of Substrate-Enzyme Interactions. Mol.Microbiol. 2013 90 649 0 4BVJ 24007310 Structure of Y105A mutant of PhaZ7 PHB depolymerase 2013-06-26 2013-09-18 Jendrossek, D.,Hermawan, S.,Subedi, B.,Papageorgiou, A.C. Biochemical Analysis and Structure Determination of Paucimonas Lemoignei Poly(3-Hydroxybutyrate) (Phb) Depolymerase Phaz7 Muteins Reveal the Phb Binding Site and Details of Substrate-Enzyme Interactions. Mol.Microbiol. 2013 90 649 0 4BVK 24007310 Structure of Y190E mutant of PhaZ7 PHB depolymerase 2013-06-26 2013-09-18 Jendrossek, D.,Hermawan, S.,Subedi, B.,Papageorgiou, A.C. Biochemical Analysis and Structure Determination of Paucimonas Lemoignei Poly(3-Hydroxybutyrate) (Phb) Depolymerase Phaz7 Muteins Reveal the Phb Binding Site and Details of Substrate-Enzyme Interactions. Mol.Microbiol. 2013 90 649 0 4BVL 24007310 Structure of 202-208 deletion mutant of PhaZ7 PHB depolymerase 2013-06-26 2013-09-18 Jendrossek, D.,Hermawan, S.,Subedi, B.,Papageorgiou, A.C. Biochemical Analysis and Structure Determination of Paucimonas Lemoignei Poly(3-Hydroxybutyrate) (Phb) Depolymerase Phaz7 Muteins Reveal the Phb Binding Site and Details of Substrate-Enzyme Interactions. Mol.Microbiol. 2013 90 649 0 4BYM 24007310 Structure of PhaZ7 PHB depolymerase Y105E mutant 2013-07-20 2013-09-18 Jendrossek, D.,Hermawan, S.,Subedi, B.,Papageorgiou, A.C. Biochemical Analysis and Structure Determination of Paucimonas Lemoignei Poly(3-Hydroxybutyrate) (Phb) Depolymerase Phaz7 Muteins Reveal the Phb Binding Site and Details of Substrate-Enzyme Interactions. Mol.Microbiol. 2013 90 649 0 4KE7 24014019 Crystal structure of Monoglyceride lipase from Bacillus sp. H257 in complex with an 1-myristoyl glycerol analogue 2013-04-25 2013-09-18 Rengachari, S.,Aschauer, P.,Schittmayer, M.,Mayer, N.,Gruber, K.,Breinbauer, R.,Birner-Gruenberger, R.,Dreveny, I.,Oberer, M. Conformational plasticity and ligand binding of bacterial monoacylglycerol lipase. J.Biol.Chem. 2013 288 31093 31104 3ZCU Rabbit muscle glycogen phosphorylase b in complex with N-(pyridyl-2- carbonyl)-N-beta-D-glucopyranosyl urea determined at 2.05 A resolution 2012-11-21 2013-12-11 Chrysina, E.D.,Nagy, V.,Felfoldi, N.,Konya, B.,Telepo, K.,Praly, J.P.,Docsa, T.,Gergely, P.,Alexacou, K.M.,Hayes, J.M.,Konstantakaki, M.,Kardakaris, R.,Leonidas, D.D.,Zographos, S.E.,Oikonomakos, N.G.,Somsak, L. Synthesis, Kinetic, Computational and Crystallographic Evaluation of N-Acyl-N-Beta-D- Glucopyranosyl)Ureas, Nanomolar Glucose Analogue Inhibitors of Glycogen Phosphorylase, Potential Antidiabetic Agents To be Published 0 0 0 0 4BR6 24316252 Crystal structure of Chaetomium thermophilum MnSOD 2013-06-04 2013-12-18 Haikarainen, T.,Frioux, C.,Zhnag, L.,Li, D.,Papageorgiou, A.C. Crystal Structure and Biochemical Characterization of a Manganese Superoxide Dismutase from Chaetomium Thermophilum. Biochim.Biophys.Acta 2014 1844 422 0 4I2V X-ray structure of the unliganded uridine phosphorylase from Yersinia pseudotuberculosis at 2.12A resolution 2012-11-23 2013-12-18 Lashkov, A.A.,Balaev, V.V.,Prokofev, I.I.,Betzel, C.,Gabdoulkhakov, A.G.,Mikhailov, A.M. X-ray structure of the unliganded uridine phosphorylase from Yersinia pseudotuberculosis at 2.12A resolution To be Published 0 0 0 0 4M2A Crystal structure of the udp-glucose pyrophosphorylase from Leishmania major in the post-reactive state 2013-08-05 2014-01-29 Fuehring, J.,Routier, F.H.,Lamerz, A.-C.,Baruch, P.,Gerardy-Schahn, R.,Fedorov, R. Catalytic Mechanism and Allosteric Regulation of Udp-Glucose Pyrophosphorylase from Leishmania Major ACS CATALYSIS 2013 3 2161 2985 4BE7 26039067 MUTANT (K220R) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP 2013-03-06 2014-03-26 Csefalvay, E.,Lapkouski, M.,Guzanova, A.,Csefalvay, L.,Baikova, T.,Shevelev, I.,Bialevich, V.,Shamayeva, K.,Janscak, P.,Kuta Smatanova, I.,Panjikar, S.,Carey, J.,Weiserova, M.,Ettrich, R. Functional Coupling of Duplex Translocation to DNA Cleavage in a Type I Restriction Enzyme. Plos One 2015 10 28700 0 4CIL 24669959 YopM-InlB: Hybrid leucine-rich repeat protein 2013-12-11 2014-04-02 Breitsprecher, D.,Gherardi, E.,Bleymuller, W.M.,Niemann, H.H. Crystal Structure of an Engineered Yopm-Inlb Hybrid Protein. Bmc Struct.Biol. 2014 14 12 0 4JHV 25849396 T2-depleted laccase from Coriolopsis caperata 2013-03-05 2014-04-23 Glazunova, O.A.,Polyakov, K.M.,Fedorova, T.V.,Dorovatovskii, P.V.,Koroleva, O.V. Elucidation of the crystal structure of Coriolopsis caperata laccase: restoration of the structure and activity of the native enzyme from the T2-depleted form by copper ions. Acta Crystallogr.,Sect.D 2015 71 854 861 4MRA 24556570 Crystal structure of Gpb in complex with QUERCETIN 2013-09-17 2014-05-07 Kantsadi, A.L.,Apostolou, A.,Theofanous, S.,Stravodimos, G.A.,Kyriakis, E.,Gorgogietas, V.A.,Chatzileontiadou, D.S.,Pegiou, K.,Skamnaki, V.T.,Stagos, D.,Kouretas, D.,Psarra, A.M.,Haroutounian, S.A.,Leonidas, D.D. Biochemical and biological assessment of the inhibitory potency of extracts from vinification byproducts of Vitis vinifera extracts against glycogen phosphorylase. Food Chem.Toxicol. 2014 67 35 43 4PO0 24753230 Crystal Structure of Leporine Serum Albumin in complex with naproxen 2014-02-23 2014-06-04 Bujacz, A.,Zielinski, K.,Sekula, B. Structural studies of bovine, equine, and leporine serum albumin complexes with naproxen. Proteins 2014 82 2199 2208 4TOP Glycine max glutathione transferase 2014-06-06 2014-06-25 Skopelitou, K.,Muleta, A.,Papageorgiou, A.C.,Pavli, O.,Flemetakis, E.,Chronopoulou, E.,Skaracis, G.,Labrou, N. Comparative analysis of the structural and functional features of two homologous tau class glutathione transferases from Glycine max To Be Published 0 0 0 0 4PU3 25056321 Shewanella oneidensis MR-1 Toxin Antitoxin System HipA, HipB and its operator DNA complex (space group P212121) 2014-03-12 2014-08-06 Wen, Y.,Behiels, E.,Felix, J.,Elegheert, J.,Vergauwen, B.,Devreese, B.,Savvides, S.N. The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence. Nucleic Acids Res. 2014 42 10134 10147 4IP0 X-Ray Structure of the Complex Uridine Phosphorylase from Vibrio cholerae with Phosphate Ion at 1.29 A Resolution 2013-01-09 2014-08-13 Prokofev, I.I.,Lashkov, A.A.,Gabdoulkhakov, A.G.,Balaev, V.V.,Seregina, T.A.,Mironov, A.S.,Betzel, C.,Mikhailov, A.M. X-ray structures of uridine phosphorylase from Vibrio cholerae in complexes with uridine, thymidine, uracil, thymine, and phosphate anion: Substrate specificity of bacterial uridine phosphorylases Crystallography Reports 2016 61 954 973 4KXK 25369882 Alanine-glyoxylate aminotransferase variant K390A/K391A in complex with the TPR domain of human Pex5p 2013-05-27 2014-11-19 Fodor, K.,Wolf, J.,Reglinski, K.,Passon, D.M.,Lou, Y.,Schliebs, W.,Erdmann, R.,Wilmanns, M. Ligand-Induced Compaction of the PEX5 Receptor-Binding Cavity Impacts Protein Import Efficiency into Peroxisomes. Traffic 2015 16 85 98 4KYO 25369882 Alanine-glyoxylate aminotransferase variant K390A in complex with the TPR domain of human Pex5p 2013-05-29 2014-11-19 Fodor, K.,Wolf, J.,Reglinski, K.,Passon, D.M.,Lou, Y.,Schliebs, W.,Erdmann, R.,Wilmanns, M. Ligand-Induced Compaction of the PEX5 Receptor-Binding Cavity Impacts Protein Import Efficiency into Peroxisomes. Traffic 2015 16 85 98 4D7M 25432019 TetR(D) in complex with anhydrotetracycline and magnesium 2014-11-25 2014-12-10 Werten, S.,Dalm, D.,Palm, G.J.,Grimm, C.C.,Hinrichs, W. Tetracycline Repressor Allostery Does not Depend on Divalent Metal Recognition. Biochemistry 2014 53 7990 0 4D7N 25432019 TetR(D) in complex with anhydrotetracycline and potassium 2014-11-25 2014-12-10 Werten, S.,Dalm, D.,Palm, G.J.,Grimm, C.C.,Hinrichs, W. Tetracycline Repressor Allostery Does not Depend on Divalent Metal Recognition. Biochemistry 2014 53 7990 0 4CHS 25479053 Crystal structure of a tau class glutathione transferase 10 from Glycine max 2013-12-04 2014-12-17 Skopelitou, K.,Muleta, A.W.,Papageorgiou, A.C.,Chronopoulou, E.,Labrou, N.E. Catalytic features and crystal structure of a tau class glutathione transferase from Glycine max specifically upregulated in response to soybean mosaic virus infections. Biochim. Biophys. Acta 2015 1854 166 177 4LZW X-ray structure uridine phosphorylase from Vibrio cholerae in complex with thymidine at 1.29 A resolution 2013-08-01 2014-12-31 Prokofev, I.I.,Lashkov, A.A.,Gabdoulkhakov, A.G.,Balaev, V.V.,Seregina, T.A.,Mironov, A.S.,Betzel, C.,Mikhailov, A.M. X-ray structures of uridine phosphorylase from Vibrio cholerae in complexes with uridine, thymidine, uracil, thymine, and phosphate anion: Substrate specificity of bacterial uridine phosphorylases Crystallography Reports 2016 0 0 0 4QSA 25493428 Crystal structure of human carbonic anhydrase isozyme II with 2-chloro-4-{[(4-methyl-6-oxo-1,6-dihydropyrimidin-2-yl)thio]acetyl}benzenesulfonamide 2014-07-03 2015-01-21 Kisonaite, M.,Zubriene, A.,Capkauskaite, E.,Smirnov, A.,Smirnoviene, J.,Kairys, V.,Michailoviene, V.,Manakova, E.,Grazulis, S.,Matulis, D. Intrinsic Thermodynamics and Structure Correlation of Benzenesulfonamides with a Pyrimidine Moiety Binding to Carbonic Anhydrases I, II, VII, XII, and XIII Plos One 2014 9 0 0 4QSB 25493428 Crystal structure of human carbonic anhydrase isozyme II with 3-{[(4-methyl-6-oxo-1,6-dihydropyrimidin-2-yl)thio]acetyl}benzenesulfonamide 2014-07-03 2015-01-21 Kisonaite, M.,Zubriene, A.,Capkauskaite, E.,Smirnov, A.,Smirnoviene, J.,Kairys, V.,Michailoviene, V.,Manakova, E.,Grazulis, S.,Matulis, D. Intrinsic Thermodynamics and Structure Correlation of Benzenesulfonamides with a Pyrimidine Moiety Binding to Carbonic Anhydrases I, II, VII, XII, and XIII Plos One 2014 9 0 0 4QSJ 25493428 Crystal structure of human carbonic anhydrase isozyme XIII with 2-chloro-4-{[(4-methyl-6-oxo-1,6-dihydropyrimidin-2-yl)thio]acetyl}benzenesulfonamide 2014-07-04 2015-01-21 Kisonaite, M.,Zubriene, A.,Capkauskaite, E.,Smirnov, A.,Smirnoviene, J.,Kairys, V.,Michailoviene, V.,Manakova, E.,Grazulis, S.,Matulis, D. Intrinsic Thermodynamics and Structure Correlation of Benzenesulfonamides with a Pyrimidine Moiety Binding to Carbonic Anhydrases I, II, VII, XII, and XIII Plos One 2014 9 0 0 4RKC 25760611 Psychrophilic aromatic amino acids aminotransferase from Psychrobacter sp. B6 2014-10-12 2015-03-11 Bujacz, A.,Rutkiewicz-Krotewicz, M.,Nowakowska-Sapota, K.,Turkiewicz, M. Crystal structure and enzymatic properties of a broad substrate-specificity psychrophilic aminotransferase from the Antarctic soil bacterium Psychrobacter sp. B6. Acta Crystallogr. D Biol. Crys 2015 71 632 645 4R8I 25901662 High Resolution Structure of a Mirror-Image RNA Oligonucleotide Aptamer in Complex with the Chemokine CCL2 2014-09-02 2015-04-29 Oberthur, D.,Achenbach, J.,Gabdulkhakov, A.,Buchner, K.,Maasch, C.,Falke, S.,Rehders, D.,Klussmann, S.,Betzel, C. Crystal structure of a mirror-image L-RNA aptamer (Spiegelmer) in complex with the natural L-protein target CCL2. Nat Commun 2015 6 6923 6923 4UB7 25961323 High-salt structure of protein kinase CK2 catalytic subunit with 4'-carboxy-6,8-bromo-flavonol (FLC26) showing an extreme distortion of the ATP-binding loop combined with a pi-halogen bond 2014-08-12 2015-07-01 Guerra, B.,Bischoff, N.,Bdzhola, V.G.,Yarmoluk, S.M.,Issinger, O.G.,Golub, A.G.,Niefind, K. A Note of Caution on the Role of Halogen Bonds for Protein Kinase/Inhibitor Recognition Suggested by High- And Low-Salt CK2 alpha Complex Structures. Acs Chem.Biol. 2015 10 1654 1660 4ZU2 26162879 Pseudomonas aeruginosa AtuE 2015-05-15 2015-07-22 Poudel, N.,Pfannstiel, J.,Simon, O.,Walter, N.,Papageorgiou, A.C.,Jendrossek, D. The Pseudomonas aeruginosa Isohexenyl Glutaconyl Coenzyme A Hydratase (AtuE) Is Upregulated in Citronellate-Grown Cells and Belongs to the Crotonase Family. Appl.Environ.Microbiol. 2015 81 6558 6566 5D73 Structure of Wuchereria bancrofti pi-class glutathione S-transferase 2015-08-13 2015-11-11 Prince, P.R.,Sakthidevi, M.,Madhumathi, J.,Perbandt, M.,Betzel, C.,Kaliraj, P. STRUCTURE OF WUCHERERIA BANCROFTI PI-CLASS GLUTATHIONE S-TRANSFERASE TO BE PUBLISHED 0 0 0 0 5D73 Structure of Wuchereria bancrofti pi-class glutathione S-transferase 2015-08-13 2015-11-11 Prince, P.R.,Sakthidevi, M.,Madhumathi, J.,Perbandt, M.,Betzel, C.,Kaliraj, P. STRUCTURE OF WUCHERERIA BANCROFTI PI-CLASS GLUTATHIONE S-TRANSFERASE TO BE PUBLISHED 0 0 0 0 4WDQ Crystal structure of haloalkane dehalogenase LinB32 mutant (L177W) from Sphingobium japonicum UT26 2014-09-09 2015-12-23 Degtjarik, O.,Rezacova, P.,Chaloupkova, R.,Damborsky, J.,Kuta-Smatanova, I. Crystal structure of haloalkane dehalogenase LinB mutant (L177W) from Sphingobium japonicum UT26 Acs Catalysis 2016 0 0 0 5E9N 29890251 Steccherinum murashkinskyi laccase at 0.95 resolution 2015-10-15 2015-12-23 Glazunova, O.A.,Polyakov, K.M.,Moiseenko, K.V.,Kurzeev, S.A.,Fedorova, T.V. Structure-function study of two new middle-redox potential laccases from basidiomycetes Antrodiella faginea and Steccherinum murashkinskyi. Int. J. Biol. Macromol. 2018 118 406 418 4XHY 27296958 NADH:FMN oxidoreductase from Paracoccus denitrificans 2015-01-06 2016-01-27 Sedlacek, V.,Klumpler, T.,Marek, J.,Kucera, I. Biochemical properties and crystal structure of the flavin reductase FerA from Paracoccus denitrificans. Microbiol. Res. 2016 0 9 22 4XJ2 27296958 FerA - NADH:FMN oxidoreductase from Paracoccus denitrificans in complex with FMN 2015-01-08 2016-01-27 Sedlacek, V.,Klumpler, T.,Marek, J.,Kucera, I. Biochemical properties and crystal structure of the flavin reductase FerA from Paracoccus denitrificans. Microbiol. Res. 2016 0 9 22 5CM5 26960569 Structure of Hydroxyethylthiazole Kinase ThiM from Staphylococcus aureus 2015-07-16 2016-03-23 Drebes, J.,Kunz, M.,Windshugel, B.,Kikhney, A.G.,Muller, I.B.,Eberle, R.J.,Oberthur, D.,Cang, H.,Svergun, D.I.,Perbandt, M.,Betzel, C.,Wrenger, C. Structure of ThiM from Vitamin B1 biosynthetic pathway of Staphylococcus aureus - Insights into a novel pro-drug approach addressing MRSA infections. Sci Rep 2016 6 22871 22871 5COJ 26960569 Structure of Hydroxyethylthiazole kinase ThiM from Staphylococcus aureus in complex with native substrate 2-(4-methyl-1,3-thiazol-5-yl)ethanol. 2015-07-20 2016-03-23 Drebes, J.,Kunz, M.,Windshugel, B.,Kikhney, A.G.,Muller, I.B.,Eberle, R.J.,Oberthur, D.,Cang, H.,Svergun, D.I.,Perbandt, M.,Betzel, C.,Wrenger, C. Structure of ThiM from Vitamin B1 biosynthetic pathway of Staphylococcus aureus - Insights into a novel pro-drug approach addressing MRSA infections. Sci Rep 2016 6 22871 22871 5FKK 27028290 TetR(D) N82A mutant in complex with anhydrotetracycline and magnesium 2015-10-17 2016-04-06 Werten, S.,Schneider, J.,Palm, G.J.,Hinrichs, W. Modular Organisation of Inducer Recognition and Allostery in the Tetracycline Repressor FEBS J. 2016 283 2102 0 5FKL 27028290 TetR(D) H100A mutant in complex with anhydrotetracycline and magnesium 2015-10-17 2016-04-06 Werten, S.,Schneider, J.,Palm, G.J.,Hinrichs, W. Modular Organisation of Inducer Recognition and Allostery in the Tetracycline Repressor FEBS J. 2016 283 2102 0 5FKO 27028290 TetR(D) E147A mutant in complex with anhydrotetracycline and magnesium 2015-10-17 2016-04-06 Werten, S.,Schneider, J.,Palm, G.J.,Hinrichs, W. Modular Organisation of Inducer Recognition and Allostery in the Tetracycline Repressor FEBS J. 2016 283 2102 0 4UIC Crystal structure of the S-layer protein rSbsC(31-844) 2015-03-27 2016-04-13 Pavkov-Keller, T.,Dordic, A.,Eder, M.,Davies, K.,Mills, D.,Egelseer, E.M.,Sleytr, U.B.,Kuehlbrandt, W.,Vonck, J.,Keller, W. S-Layer Protein Rsbsc(31-844) To be Published 0 0 0 0 4Z33 Crystal structure of the syntenin PDZ1 and PDZ2 tandem in complex with the Frizzled 7 C-terminal fragment and PIP2 2015-03-30 2016-06-29 Egea-Jimenez, A.L.,Gallardo, R.,Garcia-Pino, A.,Ivarsson, Y.,Wawrzyniak, A.M.,Kashyap, R.,Loris, R.,Schymkowitz, J.,Rousseau, F.,Zimmermann, P. Crystal structure of the syntenin PDZ1 and PDZ2 tandem in complex with the Frizzled 7 C-terminal fragment and PIP2 To Be Published 0 0 0 0 5LDU Recombinant high-redox potential laccase from Basidiomycete Trametes hirsuta 2016-06-27 2016-08-10 Fedorova, T.V.,Polyakov, K.M.,Loginov, D.S.,Savinova, O.S.,Vavilova, E.A.,Chulkin, A.M.,Lamzin, V.S.,Koroleva, O.V. First structure of recombinant high-redox potential laccase from Basidiomycete Trametes hirsuta. To Be Published 0 0 0 0 5LDR 27599737 Crystal structure of a cold-adapted dimeric beta-D-galactosidase from Paracoccus sp. 32d strain in complex with galactose 2016-06-27 2016-09-14 Rutkiewicz-Krotewicz, M.,Pietrzyk-Brzezinska, A.J.,Sekula, B.,Cieslinski, H.,Wierzbicka-Wos, A.,Kur, J.,Bujacz, A. Structural studies of a cold-adapted dimeric beta-D-galactosidase from Paracoccus sp. 32d. Acta Crystallogr D Struct Biol 2016 72 1049 1061 5LCZ 27612661 Chimeric GST 2016-06-23 2016-09-21 Axarli, I.,Muleta, A.W.,Chronopoulou, E.G.,Papageorgiou, A.C.,Labrou, N.E. Directed evolution of glutathione transferases towards a selective glutathione-binding site and improved oxidative stability. Biochim. Biophys. Acta 2017 1861 3416 3428 5LD0 27612661 Chimeric GST 2016-06-23 2016-09-21 Axarli, I.,Muleta, A.W.,Chronopoulou, E.G.,Papageorgiou, A.C.,Labrou, N.E. Directed evolution of glutathione transferases towards a selective glutathione-binding site and improved oxidative stability. Biochim. Biophys. Acta 2017 1861 3416 3428 5DWB 28039325 Crystal structure of specific restriction endonuclease AgeI-DNA complex 2015-09-22 2016-09-28 Tamulaitiene, G.,Jovaisaite, V.,Tamulaitis, G.,Songailiene, I.,Manakova, E.,Zaremba, M.,Grazulis, S.,Xu, S.Y.,Siksnys, V. Restriction endonuclease AgeI is a monomer which dimerizes to cleave DNA. Nucleic Acids Res. 2017 45 3547 3558 5E78 28739446 Crystal structure of P450 BM3 heme domain variant complexed with Co(III)Sep 2015-10-12 2016-09-28 Panneerselvam, S.,Shehzad, A.,Mueller-Dieckmann, J.,Wilmanns, M.,Bocola, M.,Davari, M.D.,Schwaneberg, U. Crystallographic insights into a cobalt (III) sepulchrate based alternative cofactor system of P450 BM3 monooxygenase. Biochim. Biophys. Acta 2018 1866 134 140 5HBN 27749819 ClpC N-terminal domain with bound phospho-arginine 2016-01-01 2016-10-12 Trentini, D.B.,Suskiewicz, M.J.,Heuck, A.,Kurzbauer, R.,Deszcz, L.,Mechtler, K.,Clausen, T. Arginine phosphorylation marks proteins for degradation by a Clp protease. Nature 2016 539 48 53 5ADP 27774510 Crystal structure of the A.17 antibody FAB fragment - Light chain S35R mutant 2015-08-21 2016-11-09 Smirnov, I.V.,Golovin, A.V.,Chatziefthimiou, S.D.,Stepanova, A.V.,Peng, Y.,Zolotareva, O.I.,Belogurov, A.A.,Kurkova, I.N.,Ponomarenko, N.A.,Wilmanns, M.,Blackburn, G.M.,Gabibov, A.G.,Lerner, R.A. Robotic Qm/Mm-Driven Maturation of Antibody Combining Sites. Sci.Adv. 2016 2 1695 0 5EHE 28001003 Crystal structure of human carbonic anhydrase isozyme II with 3-(benzylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide 2015-10-28 2016-11-09 Zubriene, A.,Smirnov, A.,Dudutiene, V.,Timm, D.D.,Matuliene, J.,Michailoviene, V.,Zaksauskas, A.,Manakova, E.,Grazulis, S.,Matulis, D. Intrinsic Thermodynamics and Structures of 2,4- and 3,4-Substituted Fluorinated Benzenesulfonamides Binding to Carbonic Anhydrases. ChemMedChem 2017 12 161 176 5E7Y Crystal structure of P450 BM3 heme domain M7 variant 2015-10-13 2017-01-25 Panneerselvm, S.,Shehzad, A.,Bocola, M.,Mueller-Dieckmann, J.,Schwaneberg, U. Crystal structure of P450 BM3 heme domain M7 variant To Be Published 0 0 0 0 5MJ7 28218438 Structure of the C. elegans nucleoside hydrolase 2016-11-30 2017-03-08 Singh, R.K.,Steyaert, J.,Versees, W. Structural and biochemical characterization of the nucleoside hydrolase from C. elegans reveals the role of two active site cysteine residues in catalysis. Protein Sci. 2017 26 985 996 5MEJ 28471364 Structural study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi. First structure of the series with 3 min total X-ray exposition time. 2016-11-15 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MEW 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi. Second structure of the series with total exposition time 33 min. 2016-11-16 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MHU 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The third structure of the series with total exposition time 63 min. 2016-11-25 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MHV 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The fourth structure of the series with total exposition time 93 min. 2016-11-25 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MHW 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The fifth structure of the series with total exposition time 123 min. 2016-11-26 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MHX 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The sixth structure of the series with total exposition time 153 min. 2016-11-26 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MHY 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The seventh structure of the series with total exposition time 183 min. 2016-11-27 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MHZ 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The 8-th structure of the series with total exposition time 213 min. 2016-11-27 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MI1 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The 9-th structure of the series with total exposition time 243 min. 2016-11-27 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MI2 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The 10-th structure of the series with total exposition time 273 min. 2016-11-27 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MIA 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The 11-th structure of the series with total exposition time 303 min. 2016-11-28 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MIB 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The 12-th structure of the series with total exposition time 333 min. 2016-11-28 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MIC 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The 13-th structure of the series with total exposition time 363 min. 2016-11-28 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MID 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The 14-th structure of the series with total exposition time 393 min. 2016-11-28 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MIE 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The 15-th structure of the series with total exposition time 423 min. 2016-11-28 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MIG 28471364 The study of the X-ray induced enzymatic reduction of molecular oxygen to water for laccase from Steccherinum murashkinskyi.The 16-th structure of the series with total exposition time 453 min. The crystal was quick refreezing before this data collection. 2016-11-28 2017-05-10 Polyakov, K.M.,Gavryushov, S.,Ivanova, S.,Fedorova, T.V.,Glazunova, O.A.,Popov, A.N.,Koroleva, O.V. Structural study of the X-ray-induced enzymatic reduction of molecular oxygen to water by Steccherinum murashkinskyi laccase: insights into the reaction mechanism. Acta Crystallogr D Struct Biol 2017 73 388 401 5MLX 28370478 Open loop conformation of PhaZ7 Y105E mutant 2016-12-08 2017-05-10 Kellici, T.F.,Mavromoustakos, T.,Jendrossek, D.,Papageorgiou, A.C. Crystal structure analysis, covalent docking, and molecular dynamics calculations reveal a conformational switch in PhaZ7 PHB depolymerase. Proteins 2017 85 1351 1361 5MLY 28370478 Closed loop conformation of PhaZ7 Y105E mutant 2016-12-08 2017-05-10 Kellici, T.F.,Mavromoustakos, T.,Jendrossek, D.,Papageorgiou, A.C. Crystal structure analysis, covalent docking, and molecular dynamics calculations reveal a conformational switch in PhaZ7 PHB depolymerase. 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Nat Commun 2020 11 1314 1314 6TDP 32161266 Crystal structure of the disulfide engineered HLA-A0201 molecule in complex with one GL dipeptide in the A pocket. 2019-11-10 2020-03-25 Anjanappa, R.,Garcia-Alai, M.,Kopicki, J.D.,Lockhauserbaumer, J.,Aboelmagd, M.,Hinrichs, J.,Nemtanu, I.M.,Uetrecht, C.,Zacharias, M.,Springer, S.,Meijers, R. Structures of peptide-free and partially loaded MHC class I molecules reveal mechanisms of peptide selection. Nat Commun 2020 11 1314 1314 6TDQ 32161266 Crystal structure of the disulfide engineered HLA-A0201 molecule in complex with one GM dipeptide in the A pocket and one GM dipeptide in the F pocket. 2019-11-10 2020-03-25 Anjanappa, R.,Garcia-Alai, M.,Kopicki, J.D.,Lockhauserbaumer, J.,Aboelmagd, M.,Hinrichs, J.,Nemtanu, I.M.,Uetrecht, C.,Zacharias, M.,Springer, S.,Meijers, R. Structures of peptide-free and partially loaded MHC class I molecules reveal mechanisms of peptide selection. Nat Commun 2020 11 1314 1314 6TDR 32161266 Crystal structure of the disulfide engineered HLA-A0201 molecule devoid of peptide (annealed) 2019-11-10 2020-03-25 Anjanappa, R.,Garcia-Alai, M.,Kopicki, J.D.,Lockhauserbaumer, J.,Aboelmagd, M.,Hinrichs, J.,Nemtanu, I.M.,Uetrecht, C.,Zacharias, M.,Springer, S.,Meijers, R. Structures of peptide-free and partially loaded MHC class I molecules reveal mechanisms of peptide selection. Nat Commun 2020 11 1314 1314 6TDS 32161266 Crystal structure of the disulfide engineered HLA-A0201 molecule without peptide bound after NaCl wash 2019-11-10 2020-03-25 Anjanappa, R.,Garcia-Alai, M.,Kopicki, J.D.,Lockhauserbaumer, J.,Aboelmagd, M.,Hinrichs, J.,Nemtanu, I.M.,Uetrecht, C.,Zacharias, M.,Springer, S.,Meijers, R. Structures of peptide-free and partially loaded MHC class I molecules reveal mechanisms of peptide selection. 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