PDB_ID PUBMED_CID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS CITATION TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 1CLC THREE-DIMENSIONAL STRUCTURE OF ENDOGLUCANASE D AT 1.9 ANGSTROMS RESOLUTION 1995-01-19 1995-06-03 Lascombe, M.B.,Souchon, H.,Juy, M.,Alzari, P.M. Three-Dimensional Structure of Endoglucanase D at 1.9 Angstroms Resolution To be Published 0 0 0 0 1WAP TRP RNA-BINDING ATTENUATION PROTEIN IN COMPLEX WITH L-TRYPTOPHAN 1995-02-03 1995-06-03 Antson, A.A.,Otridge, J.,Brzozowski, A.M.,Dodson, E.J.,Dodson, G.G.,Wilson, K.S.,Smith, T.M.,Yang, M.,Kurecki, T.,Gollnick, P. The structure of trp RNA-binding attenuation protein. Nature 1995 374 693 700 1PKY PYRUVATE KINASE FROM E. COLI IN THE T-STATE 1995-04-27 1995-12-07 Mattevi, A.,Valentini, G.,Rizzi, M.,Speranza, M.L.,Bolognesi, M.,Coda, A. Crystal structure of Escherichia coli pyruvate kinase type I: molecular basis of the allosteric transition. Structure 1995 3 729 741 1RSN RIBONUCLEASE (RNASE SA) (E.C.3.1.4.8) COMPLEXED WITH EXO-2',3'-CYCLOPHOSPHOROTHIOATE 1995-09-01 1995-12-07 Sevcik, J.,Zegers, I.,Wyns, L.,Dauter, Z.,Wilson, K.S. Complex of ribonuclease Sa with a cyclic nucleotide and a proposed model for the reaction intermediate. Eur.J.Biochem. 1993 216 301 305 1CEC A COMMON PROTEIN FOLD AND SIMILAR ACTIVE SITE IN TWO DISTINCT FAMILIES OF BETA-GLYCANASES 1995-06-07 1996-01-29 Dominguez, R.,Souchon, H.,Spinelli, S.,Dauter, Z.,Wilson, K.S.,Chauvaux, S.,Beguin, P.,Alzari, P.M. A common protein fold and similar active site in two distinct families of beta-glycanases. Nat.Struct.Biol. 1995 2 569 576 1CDO ALCOHOL DEHYDROGENASE (E.C.1.1.1.1) (EE ISOZYME) COMPLEXED WITH NICOTINAMIDE ADENINE DINUCLEOTIDE (NAD), AND ZINC 1995-09-29 1996-03-08 Ramaswamy, S.,el Ahmad, M.,Danielsson, O.,Jornvall, H.,Eklund, H. Crystal structure of cod liver class I alcohol dehydrogenase: substrate pocket and structurally variable segments. Protein Sci. 1996 5 663 671 1LIN CALMODULIN COMPLEXED WITH TRIFLUOPERAZINE (1:4 COMPLEX) 1995-10-11 1996-03-08 Vandonselaar, M.,Hickie, R.A.,Quail, J.W.,Delbaere, L.T. Trifluoperazine-induced conformational change in Ca(2+)-calmodulin. Nat.Struct.Biol. 1994 1 795 801 2DGC GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DNA 1995-09-28 1996-03-08 Keller, W.,Konig, P.,Richmond, T.J. Crystal structure of a bZIP/DNA complex at 2.2 A: determinants of DNA specific recognition. J.Mol.Biol. 1995 254 657 667 1CEN CELLULASE (CELC) MUTANT WITH GLU 140 REPLACED BY GLN COMPLEXED WITH CELLOHEXAOSE 1995-12-04 1996-04-03 Dominguez, R.,Souchon, H.,Lascombe, M.,Alzari, P.M. The crystal structure of a family 5 endoglucanase mutant in complexed and uncomplexed forms reveals an induced fit activation mechanism. J.Mol.Biol. 1996 257 1042 1051 1CEO CELLULASE (CELC) MUTANT WITH GLU 140 REPLACED BY GLN 1995-12-04 1996-04-03 Dominguez, R.,Souchon, H.,Lascombe, M.,Alzari, P.M. The crystal structure of a family 5 endoglucanase mutant in complexed and uncomplexed forms reveals an induced fit activation mechanism. J.Mol.Biol. 1996 257 1042 1051 1IRN RUBREDOXIN (ZN-SUBSTITUTED) AT 1.2 ANGSTROMS RESOLUTION 1995-12-13 1996-04-03 Dauter, Z.,Wilson, K.S.,Sieker, L.C.,Moulis, J.M.,Meyer, J. Zinc- and iron-rubredoxins from Clostridium pasteurianum at atomic resolution: a high-precision model of a ZnS4 coordination unit in a protein. Proc.Natl.Acad.Sci.USA 1996 93 8836 8840 1IRO RUBREDOXIN (OXIDIZED, FE(III)) AT 1.1 ANGSTROMS RESOLUTION 1995-12-13 1996-04-03 Dauter, Z.,Wilson, K.S.,Sieker, L.C.,Moulis, J.M.,Meyer, J. Zinc- and iron-rubredoxins from Clostridium pasteurianum at atomic resolution: a high-precision model of a ZnS4 coordination unit in a protein. Proc.Natl.Acad.Sci.USA 1996 93 8836 8840 1OTG 5-CARBOXYMETHYL-2-HYDROXYMUCONATE ISOMERASE 1995-11-09 1996-04-03 Subramanya, H.S.,Roper, D.I.,Dauter, Z.,Dodson, E.J.,Davies, G.J.,Wilson, K.S.,Wigley, D.B. Enzymatic ketonization of 2-hydroxymuconate: specificity and mechanism investigated by the crystal structures of two isomerases. Biochemistry 1996 35 792 802 1CTJ CRYSTAL STRUCTURE OF CYTOCHROME C6 1995-08-08 1996-06-10 Frazao, C.,Soares, C.M.,Carrondo, M.A.,Pohl, E.,Dauter, Z.,Wilson, K.S.,Hervas, M.,Navarro, J.A.,De la Rosa, M.A.,Sheldrick, G.M. Ab initio determination of the crystal structure of cytochrome c6 and comparison with plastocyanin. Structure 1995 3 1159 1169 1YTF YEAST TFIIA/TBP/DNA COMPLEX 1996-04-05 1996-06-20 Tan, S.,Hunziker, Y.,Sargent, D.F.,Richmond, T.J. Crystal structure of a yeast TFIIA/TBP/DNA complex. Nature 1996 381 127 134 2ASI ASPARTIC PROTEINASE 1995-12-09 1996-08-01 Yang, J.,Teplyakov, A.,Quail, J.W. Crystal structure of the aspartic proteinase from Rhizomucor miehei at 2.15 A resolution. J.Mol.Biol. 1997 268 449 459 1SLY COMPLEX OF THE 70-KDA SOLUBLE LYTIC TRANSGLYCOSYLASE WITH BULGECIN A 1995-08-02 1996-08-17 Thunnissen, A.M.,Rozeboom, H.J.,Kalk, K.H.,Dijkstra, B.W. Structure of the 70-kDa soluble lytic transglycosylase complexed with bulgecin A. Implications for the enzymatic mechanism. Biochemistry 1995 34 12729 12737 1PRE PROAEROLYSIN 1995-09-15 1996-10-14 Parker, M.W.,Buckley, J.T.,Postma, J.P.,Tucker, A.D.,Leonard, K.,Pattus, F.,Tsernoglou, D. Structure of the Aeromonas toxin proaerolysin in its water-soluble and membrane-channel states. Nature 1994 367 292 295 1RGF 15299705 HYDROLASE, GUANYLORIBONUCLEASE 1995-06-05 1996-10-14 Sevcik, J.,Dauter, Z.,Lamzin, V.S.,Wilson, K.S. Ribonuclease from Streptomyces aureofaciens at atomic resolution. Acta Crystallogr.,Sect.D 1996 52 327 344 1RGG 15299705 HYDROLASE, GUANYLORIBONUCLEASE 1995-06-05 1996-10-14 Sevcik, J.,Dauter, Z.,Lamzin, V.S.,Wilson, K.S. Ribonuclease from Streptomyces aureofaciens at atomic resolution. Acta Crystallogr.,Sect.D 1996 52 327 344 1RGH 15299705 HYDROLASE, GUANYLORIBONUCLEASE 1995-06-05 1996-10-14 Sevcik, J.,Dauter, Z.,Lamzin, V.S.,Wilson, K.S. Ribonuclease from Streptomyces aureofaciens at atomic resolution. Acta Crystallogr.,Sect.D 1996 52 327 344 1SVN SAVINASE 1995-09-01 1996-10-14 Betzel, C.,Klupsch, S.,Papendorf, G.,Hastrup, S.,Branner, S.,Wilson, K.S. Crystal structure of the alkaline proteinase Savinase from Bacillus lentus at 1.4 A resolution. J.Mol.Biol. 1992 223 427 445 1TTR 15299606 TRANSTHYRETIN-V/122/I CARDIOMYOPATHIC MUTANT 1996-04-11 1996-10-14 Damas, A.M.,Ribeiro, S.,Lamzin, V.S.,Palha, J.A.,Saraiva, M.J. Structure of the Val122Ile variant transthyretin - a cardiomyopathic mutant. Acta Crystallogr.,Sect.D 1996 52 966 972 1BLU STRUCTURE OF THE 2[4FE-4S] FERREDOXIN FROM CHROMATIUM VINOSUM 1996-04-16 1996-11-08 Moulis, J.M.,Sieker, L.C.,Wilson, K.S.,Dauter, Z. Crystal structure of the 2[4Fe-4S] ferredoxin from Chromatium vinosum: evolutionary and mechanistic inferences for [3/4Fe-4S] ferredoxins. Protein Sci. 1996 5 1765 1775 2ACE NATIVE ACETYLCHOLINESTERASE (E.C. 3.1.1.7) FROM TORPEDO CALIFORNICA 1996-06-23 1996-11-08 Raves, M.L.,Harel, M.,Pang, Y.-P.,Silman, I.,Kozikowski, A.P.,Sussman, J.L. Structure of acetylcholinesterase complexed with the nootropic alkaloid, (-)-huperzine A. Nat.Struct.Biol. 1997 4 57 63 1YPP ACID ANHYDRIDE HYDROLASE 1996-05-29 1996-12-07 Harutyunyan, E.H.,Kuranova, I.P.,Vainshtein, B.K.,Hohne, W.E.,Lamzin, V.S.,Dauter, Z.,Teplyakov, A.V.,Wilson, K.S. X-ray structure of yeast inorganic pyrophosphatase complexed with manganese and phosphate. Eur.J.Biochem. 1996 239 220 228 1DEL DEOXYNUCLEOSIDE MONOPHOSPHATE KINASE COMPLEXED WITH DEOXY-GMP AND AMP 1996-01-09 1997-01-11 Teplyakov, A.,Sebastiao, P.,Obmolova, G.,Perrakis, A.,Brush, G.S.,Bessman, M.J.,Wilson, K.S. Crystal structure of bacteriophage T4 deoxynucleotide kinase with its substrates dGMP and ATP. EMBO J. 1996 15 3487 3497 1EUT SIALIDASE, LARGE 68KD FORM, COMPLEXED WITH GALACTOSE 1996-06-21 1997-01-11 Gaskell, A.,Crennell, S.,Taylor, G. The three domains of a bacterial sialidase: a beta-propeller, an immunoglobulin module and a galactose-binding jelly-roll. Structure 1995 3 1197 1205 1EUU SIALIDASE OR NEURAMINIDASE, LARGE 68KD FORM 1996-06-21 1997-01-11 Gaskell, A.,Crennell, S.,Taylor, G. The three domains of a bacterial sialidase: a beta-propeller, an immunoglobulin module and a galactose-binding jelly-roll. Structure 1995 3 1197 1205 1QBA BACTERIAL CHITOBIASE, GLYCOSYL HYDROLASE FAMILY 20 1996-06-06 1997-01-11 Tews, I.,Perrakis, A.,Oppenheim, A.,Dauter, Z.,Wilson, K.S.,Vorgias, C.E. Bacterial chitobiase structure provides insight into catalytic mechanism and the basis of Tay-Sachs disease. Nat.Struct.Biol. 1996 3 638 648 2HVM HEVAMINE A AT 1.8 ANGSTROM RESOLUTION 1996-07-02 1997-01-11 Terwisscha van Scheltinga, A.C.,Hennig, M.,Dijkstra, B.W. The 1.8 A resolution structure of hevamine, a plant chitinase/lysozyme, and analysis of the conserved sequence and structure motifs of glycosyl hydrolase family 18. J.Mol.Biol. 1996 262 243 257 1WAD CYTOCHROME C3 WITH 4 HEME GROUPS AND ONE CALCIUM ION 1996-01-10 1997-01-27 Matias, P.M.,Morais, J.,Coelho, R.,Carrondo, M.A.,Wilson, K.,Dauter, Z.,Sieker, L. Cytochrome c3 from Desulfovibrio gigas: crystal structure at 1.8 A resolution and evidence for a specific calcium-binding site. Protein Sci. 1996 5 1342 1354 1ML1 PROTEIN ENGINEERING WITH MONOMERIC TRIOSEPHOSPHATE ISOMERASE: THE MODELLING AND STRUCTURE VERIFICATION OF A SEVEN RESIDUE LOOP 1996-09-27 1997-03-12 Thanki, N.,Zeelen, J.P.,Mathieu, M.,Jaenicke, R.,Abagyan, R.A.,Wierenga, R.K.,Schliebs, W. Protein engineering with monomeric triosephosphate isomerase (monoTIM): the modelling and structure verification of a seven-residue loop. Protein Eng. 1997 10 159 167 1ZDH MS2 COAT PROTEIN/RNA COMPLEX 1996-09-24 1997-04-21 Valegard, K.,Murray, J.B.,Stonehouse, N.J.,van den Worm, S.,Stockley, P.G.,Liljas, L. The three-dimensional structures of two complexes between recombinant MS2 capsids and RNA operator fragments reveal sequence-specific protein-RNA interactions. J.Mol.Biol. 1997 270 724 738 284D THE BI-LOOP, A NEW GENERAL FOUR-STRANDED DNA MOTIF 1996-09-11 1997-06-11 Salisbury, S.A.,Wilson, S.E.,Powell, H.R.,Kennard, O.,Lubini, P.,Sheldrick, G.M.,Escaja, N.,Alazzouzi, E.,Grandas, A.,Pedroso, E. The bi-loop, a new general four-stranded DNA motif. Proc.Natl.Acad.Sci.USA 1997 94 5515 5518 1VOT ACETYLCHOLINESTERASE (E.C. 3.1.1.7) COMPLEXED WITH HUPERZINE A 1996-06-23 1997-06-16 Raves, M.L.,Harel, M.,Pang, Y.P.,Silman, I.,Kozikowski, A.P.,Sussman, J.L. Structure of acetylcholinesterase complexed with the nootropic alkaloid, (-)-huperzine A. Nat.Struct.Biol. 1997 4 57 63 1DUB 2-ENOYL-COA HYDRATASE, DATA COLLECTED AT 100 K, PH 6.5 1996-06-10 1997-07-07 Engel, C.K.,Mathieu, M.,Zeelen, J.P.,Hiltunen, J.K.,Wierenga, R.K. Crystal structure of enoyl-coenzyme A (CoA) hydratase at 2.5 angstroms resolution: a spiral fold defines the CoA-binding pocket. EMBO J. 1996 15 5135 5145 1U9B MURINE/HUMAN UBIQUITIN-CONJUGATING ENZYME UBC9 1997-05-20 1997-07-07 Tong, H.,Hateboer, G.,Perrakis, A.,Bernards, R.,Sixma, T.K. Crystal structure of murine/human Ubc9 provides insight into the variability of the ubiquitin-conjugating system. J.Biol.Chem. 1997 272 21381 21387 1DAO COVALENT ADDUCT OF D-AMINO ACID OXIDASE FROM PIG KIDNEY WITH 3-METHYL-2-OXO-VALERIC ACID 1997-01-16 1997-07-23 Todone, F.,Vanoni, M.A.,Mozzarelli, A.,Bolognesi, M.,Coda, A.,Curti, B.,Mattevi, A. Active site plasticity in D-amino acid oxidase: a crystallographic analysis. Biochemistry 1997 36 5853 5860 1QIL INACTIVE MUTANT TOXIC SHOCK SYNDROME TOXIN-1 AT 2.5 A 1997-03-27 1997-08-12 Papageorgiou, A.C.,Quinn, C.P.,Beer, D.,Brehm, R.D.,Tranter, H.S.,Bonventre, P.F.,Acharya, K.R. Crystal structure of a biologically inactive mutant of toxic shock syndrome toxin-1 at 2.5 A resolution. Protein Sci. 1996 5 1737 1741 2QIL TOXIC SHOCK SYNDROME TOXIN-1 AT 2.07 A RESOLUTION 1997-03-27 1997-08-12 Papageorgiou, A.C.,Brehm, R.D.,Leonidas, D.D.,Tranter, H.S.,Acharya, K.R. The refined crystal structure of toxic shock syndrome toxin-1 at 2.07 A resolution. J.Mol.Biol. 1996 260 553 569 1CEX STRUCTURE OF CUTINASE 1997-02-18 1997-08-20 Longhi, S.,Czjzek, M.,Lamzin, V.,Nicolas, A.,Cambillau, C. Atomic resolution (1.0 A) crystal structure of Fusarium solani cutinase: stereochemical analysis. J.Mol.Biol. 1997 268 779 799 1EG1 ENDOGLUCANASE I FROM TRICHODERMA REESEI 1996-11-26 1997-08-20 Kleywegt, G.J.,Zou, J.Y.,Divne, C.,Davies, G.J.,Sinning, I.,Stahlberg, J.,Reinikainen, T.,Srisodsuk, M.,Teeri, T.T.,Jones, T.A. The crystal structure of the catalytic core domain of endoglucanase I from Trichoderma reesei at 3.6 A resolution, and a comparison with related enzymes. J.Mol.Biol. 1997 272 383 397 1OPD HISTIDINE-CONTAINING PROTEIN (HPR), MUTANT WITH SER 46 REPLACED BY ASP (S46D) 1996-08-01 1997-08-20 Napper, S.,Anderson, J.W.,Georges, F.,Quail, J.W.,Delbaere, L.T.,Waygood, E.B. Mutation of serine-46 to aspartate in the histidine-containing protein of Escherichia coli mimics the inactivation by phosphorylation of serine-46 in HPrs from gram-positive bacteria. Biochemistry 1996 35 11260 11267 1FUI L-FUCOSE ISOMERASE FROM ESCHERICHIA COLI 1997-04-14 1997-10-15 Seemann, J.E.,Schulz, G.E. Structure and mechanism of L-fucose isomerase from Escherichia coli. J.Mol.Biol. 1997 273 256 268 353D CRYSTAL STRUCTURE OF DOMAIN A OF THERMUS FLAVUS 5S RRNA AND THE CONTRIBUTION OF WATER MOLECULES TO ITS STRUCTURE 1997-09-29 1997-11-10 Betzel, C.,Lorenz, S.,Furste, J.P.,Bald, R.,Zhang, M.,Schneider, T.R.,Wilson, K.S.,Erdmann, V.A. Crystal structure of domain A of Thermus flavus 5S rRNA and the contribution of water molecules to its structure. FEBS Lett. 1994 351 159 164 1BAY GLUTATHIONE S-TRANSFERASE YFYF CYS 47-CARBOXYMETHYLATED CLASS PI, FREE ENZYME 1996-11-02 1997-11-12 Vega, M.C.,Walsh, S.B.,Mantle, T.J.,Coll, M. The three-dimensional structure of Cys-47-modified mouse liver glutathione S-transferase P1-1. Carboxymethylation dramatically decreases the affinity for glutathione and is associated with a loss of electron density in the alphaB-310B region. J.Biol.Chem. 1998 273 2844 2850 1AJ8 CITRATE SYNTHASE FROM PYROCOCCUS FURIOSUS 1997-05-16 1997-11-19 Russell, R.J.,Ferguson, J.M.,Hough, D.W.,Danson, M.J.,Taylor, G.L. The crystal structure of citrate synthase from the hyperthermophilic archaeon pyrococcus furiosus at 1.9 A resolution,. Biochemistry 1997 36 9983 9994 1AL3 COFACTOR BINDING FRAGMENT OF CYSB FROM KLEBSIELLA AEROGENES 1997-06-10 1997-12-24 Tyrrell, R.,Verschueren, K.H.,Dodson, E.J.,Murshudov, G.N.,Addy, C.,Wilkinson, A.J. The structure of the cofactor-binding fragment of the LysR family member, CysB: a familiar fold with a surprising subunit arrangement. Structure 1997 5 1017 1032 1AVS X-RAY CRYSTALLOGRAPHIC STUDY OF CALCIUM-SATURATED N-TERMINAL DOMAIN OF TROPONIN C 1997-09-19 1997-12-24 Strynadka, N.C.,Cherney, M.,Sielecki, A.R.,Li, M.X.,Smillie, L.B.,James, M.N. Structural details of a calcium-induced molecular switch: X-ray crystallographic analysis of the calcium-saturated N-terminal domain of troponin C at 1.75 A resolution. J.Mol.Biol. 1997 273 238 255 1DHK STRUCTURE OF PORCINE PANCREATIC ALPHA-AMYLASE 1996-10-14 1997-12-24 Bompard-Gilles, C.,Rousseau, P.,Rouge, P.,Payan, F. Substrate mimicry in the active center of a mammalian alpha-amylase: structural analysis of an enzyme-inhibitor complex. Structure 1996 4 1441 1452 1MSI STRUCTURE OF ANTIFREEZE GLYCOPROTEIN QAE(HPLC 12) 1996-10-08 1997-12-24 Jia, Z.,DeLuca, C.I.,Chao, H.,Davies, P.L. Structural basis for the binding of a globular antifreeze protein to ice. Nature 1996 384 285 288 1AWD 10545324 FERREDOXIN [2FE-2S] OXIDIZED FORM FROM CHLORELLA FUSCA 1997-10-01 1998-01-14 Bes, M.T.,Parisini, E.,Inda, L.A.,Saraiva, L.,Peleato, M.L.,Sheldrick, G.M. Crystal structure determination at 1.4 A resolution of ferredoxin from the green alga Chlorella fusca Structure Fold.Des. 1999 7 1201 1211 1R1R RIBONUCLEOTIDE REDUCTASE R1 PROTEIN MUTANT Y730F WITH A REDUCED ACTIVE SITE FROM ESCHERICHIA COLI 1997-07-15 1998-01-28 Eriksson, M.,Uhlin, U.,Ramaswamy, S.,Ekberg, M.,Regnstrom, K.,Sjoberg, B.M.,Eklund, H. Binding of allosteric effectors to ribonucleotide reductase protein R1: reduction of active-site cysteines promotes substrate binding. Structure 1997 5 1077 1092 3CYR CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ATCC 27774P 1997-07-24 1998-01-28 Simoes, P.,Matias, P.M.,Morais, J.,Wilson, K.,Dauter, Z.,Carrondo, M.A. Refinement of the Three-Dimensional Structures of Cytochrome C3 from Desulfovibrio Vulgaris Hildenborough at 1.67 Angstroms Resolution and from Desulfovibrio Desulfuricans Atcc 27774 at 1.6 Angstroms Resolution Inorg.Chim.Acta. 1998 273 213 224 2ACK 10089512 ACETYLCHOLINESTERASE COMPLEXED WITH EDROPHONIUM, MONOCHROMATIC DATA 1997-10-29 1998-02-11 Ravelli, R.B.,Raves, M.L.,Ren, Z.,Bourgeois, D.,Roth, M.,Kroon, J.,Silman, I.,Sussman, J.L. Static Laue diffraction studies on acetylcholinesterase. Acta Crystallogr.,Sect.D 1998 54 1359 1366 1ATZ HUMAN VON WILLEBRAND FACTOR A3 DOMAIN 1997-08-15 1998-02-25 Huizinga, E.G.,Martijn van der Plas, R.,Kroon, J.,Sixma, J.J.,Gros, P. Crystal structure of the A3 domain of human von Willebrand factor: implications for collagen binding. Structure 1997 5 1147 1156 2SAK STAPHYLOKINASE (SAKSTAR VARIANT) 1997-02-20 1998-02-25 Rabijns, A.,De Bondt, H.L.,De Ranter, C. Three-dimensional structure of staphylokinase, a plasminogen activator with therapeutic potential. Nat.Struct.Biol. 1997 4 357 360 1AE5 HUMAN HEPARIN BINDING PROTEIN 1997-03-05 1998-03-11 Iversen, L.F.,Kastrup, J.S.,Bjorn, S.E.,Rasmussen, P.B.,Wiberg, F.C.,Flodgaard, H.J.,Larsen, I.K. Structure of HBP, a multifunctional protein with a serine proteinase fold. Nat.Struct.Biol. 1997 4 265 268 1PCF HUMAN TRANSCRIPTIONAL COACTIVATOR PC4 C-TERMINAL DOMAIN 1997-09-09 1998-03-18 Brandsen, J.,Werten, S.,van der Vliet, P.C.,Meisterernst, M.,Kroon, J.,Gros, P. C-terminal domain of transcription cofactor PC4 reveals dimeric ssDNA binding site. Nat.Struct.Biol. 1997 4 900 903 1SXN REDUCED BOVINE SUPEROXIDE DISMUTASE AT PH 5.0 1997-09-17 1998-03-18 Ferraroni, M.,Rypniewski, W.R.,Bruni, B.,Orioli, P.,Mangani, S. Crystallographic determination of reduced bovine superoxide dismutase at pH 5.0 and of anion binding to its active site. J.Biol.Inorg.Chem. 1998 3 411 422 1VSB SUBTILISIN CARLSBERG L-PARA-CHLOROPHENYL-1-ACETAMIDO BORONIC ACID INHIBITOR COMPLEX 1997-09-17 1998-03-18 Stoll, V.S.,Eger, B.T.,Hynes, R.C.,Martichonok, V.,Jones, J.B.,Pai, E.F. Differences in binding modes of enantiomers of 1-acetamido boronic acid based protease inhibitors: crystal structures of gamma-chymotrypsin and subtilisin Carlsberg complexes. Biochemistry 1998 37 451 462 3LZT REFINEMENT OF TRICLINIC LYSOZYME AT ATOMIC RESOLUTION 1997-03-23 1998-03-25 Walsh, M.A.,Schneider, T.R.,Sieker, L.C.,Dauter, Z.,Lamzin, V.S.,Wilson, K.S. Refinement of triclinic hen egg-white lysozyme at atomic resolution. Acta Crystallogr.,Sect.D 1998 54 522 546 1OAT ORNITHINE AMINOTRANSFERASE 1997-03-26 1998-04-01 Shen, B.W.,Hennig, M.,Hohenester, E.,Jansonius, J.N.,Schirmer, T. Crystal structure of human recombinant ornithine aminotransferase. J.Mol.Biol. 1998 277 81 102 1A3R FAB FRAGMENT (ANTIBODY 8F5) COMPLEXED WITH PEPTIDE FROM HUMAN RHINOVIRUS (SEROTYPE 2) VIRAL CAPSID PROTEIN VP2 (RESIDUES 156-170) 1998-01-23 1998-04-29 Tormo, J.,Blaas, D.,Parry, N.R.,Rowlands, D.,Stuart, D.,Fita, I. Crystal structure of a human rhinovirus neutralizing antibody complexed with a peptide derived from viral capsid protein VP2. EMBO J. 1994 13 2247 2256 2DUB ENOYL-COA HYDRATASE COMPLEXED WITH OCTANOYL-COA 1997-04-28 1998-04-29 Engel, C.K.,Kiema, T.R.,Hiltunen, J.K.,Wierenga, R.K. The crystal structure of enoyl-CoA hydratase complexed with octanoyl-CoA reveals the structural adaptations required for binding of a long chain fatty acid-CoA molecule. J.Mol.Biol. 1998 275 847 859 1TN3 THE C-TYPE LECTIN CARBOHYDRATE RECOGNITION DOMAIN OF HUMAN TETRANECTIN 1997-11-06 1998-05-06 Kastrup, J.S.,Nielsen, B.B.,Rasmussen, H.,Holtet, T.L.,Graversen, J.H.,Etzerodt, M.,Thogersen, H.C.,Larsen, I.K. Structure of the C-type lectin carbohydrate recognition domain of human tetranectin. Acta Crystallogr.,Sect.D 1998 54 757 766 1AKR G61A OXIDIZED FLAVODOXIN MUTANT 1997-05-27 1998-05-27 O'Farrell, P.A.,Walsh, M.A.,McCarthy, A.A.,Higgins, T.M.,Voordouw, G.,Mayhew, S.G. Modulation of the redox potentials of FMN in Desulfovibrio vulgaris flavodoxin: thermodynamic properties and crystal structures of glycine-61 mutants. Biochemistry 1998 37 8405 8416 2PAW THE CATALYTIC FRAGMENT OF POLY(ADP-RIBOSE) POLYMERASE 1997-11-25 1998-05-27 Ruf, A.,de Murcia, G.,Schulz, G.E. Inhibitor and NAD+ binding to poly(ADP-ribose) polymerase as derived from crystal structures and homology modeling. Biochemistry 1998 37 3893 3900 2PPS PHOTOSYNTHETIC REACTION CENTER AND CORE ANTENNA SYSTEM (TRIMERIC), ALPHA CARBON ONLY 1997-05-27 1998-05-27 Krauss, N.,Schubert, W.D.,Klukas, O.,Fromme, P.,Witt, H.T.,Saenger, W. Photosystem I at 4 A resolution represents the first structural model of a joint photosynthetic reaction centre and core antenna system. Nat.Struct.Biol. 1996 3 965 973 1URP D-RIBOSE-BINDING PROTEIN FROM ESCHERICHIA COLI 1998-04-03 1998-06-17 Bjorkman, A.J.,Mowbray, S.L. Multiple open forms of ribose-binding protein trace the path of its conformational change. J.Mol.Biol. 1998 279 651 664 361D CRYSTAL STRUCTURE OF DOMAIN E OF THERMUS FLAVUS 5S RRNA: A HELICAL RNA-STRUCTURE INCLUDING A TETRALOOP 1997-11-10 1998-07-01 Perbandt, M.,Nolte, A.,Lorenz, S.,Bald, R.,Betzel, C.,Erdmann, V.A. Crystal structure of domain E of Thermus flavus 5S rRNA: a helical RNA structure including a hairpin loop. FEBS Lett. 1998 429 211 215 1A2Z 10368293 PYRROLIDONE CARBOXYL PEPTIDASE FROM THERMOCOCCUS LITORALIS 1998-01-13 1998-07-15 Singleton, M.,Isupov, M.,Littlechild, J. X-ray structure of pyrrolidone carboxyl peptidase from the hyperthermophilic archaeon Thermococcus litoralis. Structure Fold.Des. 1999 7 237 244 1A3A CRYSTAL STRUCTURE OF IIA MANNITOL FROM ESCHERICHIA COLI 1998-01-19 1998-08-12 van Montfort, R.L.,Pijning, T.,Kalk, K.H.,Hangyi, I.,Kouwijzer, M.L.,Robillard, G.T.,Dijkstra, B.W. The structure of the Escherichia coli phosphotransferase IIAmannitol reveals a novel fold with two conformations of the active site. Structure 1998 6 377 388 1F13 RECOMBINANT HUMAN CELLULAR COAGULATION FACTOR XIII 1998-01-16 1998-08-12 Weiss, M.S.,Metzner, H.J.,Hilgenfeld, R. Two non-proline cis peptide bonds may be important for factor XIII function. FEBS Lett. 1998 423 291 296 5LIP PSEUDOMONAS LIPASE COMPLEXED WITH RC-(RP, SP)-1,2-DIOCTYLCARBAMOYLGLYCERO-3-O-OCTYLPHOSPHONATE 1997-09-02 1998-08-19 Lang, D.A.,Mannesse, M.L.M.,De Haas, G.,Verheij, H.M.,Dijkstra, B.W. Structural basis of the chiral selectivity of Pseudomonas cepacia lipase Eur.J.Biochem. 1998 254 333 340 1ERE HUMAN ESTROGEN RECEPTOR LIGAND-BINDING DOMAIN IN COMPLEX WITH 17BETA-ESTRADIOL 1997-09-08 1998-09-16 Brzozowski, A.M.,Pike, A.C.,Dauter, Z.,Hubbard, R.E.,Bonn, T.,Engstrom, O.,Ohman, L.,Greene, G.L.,Gustafsson, J.A.,Carlquist, M. Molecular basis of agonism and antagonism in the oestrogen receptor. Nature 1997 389 753 758 1ERR HUMAN ESTROGEN RECEPTOR LIGAND-BINDING DOMAIN IN COMPLEX WITH RALOXIFENE 1997-09-08 1998-09-16 Brzozowski, A.M.,Pike, A.C.,Dauter, Z.,Hubbard, R.E.,Bonn, T.,Engstrom, O.,Ohman, L.,Greene, G.L.,Gustafsson, J.A.,Carlquist, M. Molecular basis of agonism and antagonism in the oestrogen receptor. Nature 1997 389 753 758 1BRR X-RAY STRUCTURE OF THE BACTERIORHODOPSIN TRIMER/LIPID COMPLEX 1998-07-28 1998-09-30 Essen, L.,Siegert, R.,Lehmann, W.D.,Oesterhelt, D. Lipid patches in membrane protein oligomers: crystal structure of the bacteriorhodopsin-lipid complex Proc.Natl.Acad.Sci.USA 1998 95 11673 11678 1SXS Reduced bovine superoxide dismutase at pH 5.0 complexed with thiocyanate 1998-09-24 1998-09-30 Ferraroni, M.,Rypniewski, W.R.,Bruni, B.,Orioli, P.,Mangani, S. Crystallographic determination of reduced bovine superoxide dismutase at pH 5.0 and of anion binding to its active site J.Biol.Inorg.Chem. 1998 3 411 422 1SXZ Reduced bovine superoxide dismutase at pH 5.0 complexed with azide 1998-09-22 1998-09-30 Ferraroni, M.,Rypniewski, W.R.,Bruni, B.,Orioli, P.,Mangani, S. Crystallographic determination of reduced bovine superoxide dismutase at pH 5.0 and of anion binding to its active site J.Biol.Inorg.Chem. 1998 3 411 422 1MOQ ISOMERASE DOMAIN OF GLUCOSAMINE 6-PHOSPHATE SYNTHASE COMPLEXED WITH GLUCOSAMINE 6-PHOSPHATE 1997-04-11 1998-10-07 Teplyakov, A.,Obmolova, G.,Badet-Denisot, M.A.,Badet, B.,Polikarpov, I. Involvement of the C terminus in intramolecular nitrogen channeling in glucosamine 6-phosphate synthase: evidence from a 1.6 A crystal structure of the isomerase domain. Structure 1998 6 1047 1055 1MOR 10091662 ISOMERASE DOMAIN OF GLUCOSAMINE 6-PHOSPHATE SYNTHASE COMPLEXED WITH GLUCOSE 6-PHOSPHATE 1997-04-12 1998-10-07 Teplyakov, A.,Obmolova, G.,Badet-Denisot, M.A.,Badet, B. The mechanism of sugar phosphate isomerization by glucosamine 6-phosphate synthase. Protein Sci. 1999 8 596 602 2PVB 10548066 PIKE PARVALBUMIN (PI 4.10) AT LOW TEMPERATURE (100K) AND ATOMIC RESOLUTION (0.91 A). 1998-10-02 1998-10-07 Declercq, J.P.,Evrard, C.,Lamzin, V.,Parello, J. Crystal structure of the EF-hand parvalbumin at atomic resolution (0.91 A) and at low temperature (100 K). Evidence for conformational multistates within the hydrophobic core. Protein Sci. 1999 8 2194 2204 1ATG AZOTOBACTER VINELANDII PERIPLASMIC MOLYBDATE-BINDING PROTEIN 1997-08-14 1998-10-14 Lawson, D.M.,Williams, C.E.,Mitchenall, L.A.,Pau, R.N. Ligand size is a major determinant of specificity in periplasmic oxyanion-binding proteins: the 1.2 A resolution crystal structure of Azotobacter vinelandii ModA. Structure 1998 6 1529 1539 1A6Y REVERBA ORPHAN NUCLEAR RECEPTOR/DNA COMPLEX 1998-03-04 1998-10-21 Zhao, Q.,Khorasanizadeh, S.,Miyoshi, Y.,Lazar, M.A.,Rastinejad, F. Structural elements of an orphan nuclear receptor-DNA complex. Mol.Cell 1998 1 849 861 1A9B DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS 1998-04-03 1998-10-21 Menssen, R.,Orth, P.,Ziegler, A.,Saenger, W. Decamer-like conformation of a nona-peptide bound to HLA-B*3501 due to non-standard positioning of the C terminus. J.Mol.Biol. 1999 285 645 653 2AMV THE STRUCTURE OF GLYCOGEN PHOSPHORYLASE B WITH AN ALKYL-DIHYDROPYRIDINE-DICARBOXYLIC ACID 1998-10-13 1998-10-21 Zographos, S.E.,Oikonomakos, N.G.,Tsitsanou, K.E.,Leonidas, D.D.,Chrysina, E.D.,Skamnaki, V.T.,Bischoff, H.,Goldmann, S.,Watson, K.A.,Johnson, L.N. The structure of glycogen phosphorylase b with an alkyldihydropyridine-dicarboxylic acid compound, a novel and potent inhibitor. Structure 1997 5 1413 1425 1BH6 SUBTILISIN DY IN COMPLEX WITH THE SYNTHETIC INHIBITOR N-BENZYLOXYCARBONYL-ALA-PRO-PHE-CHLOROMETHYL KETONE 1998-06-15 1998-11-04 Eschenburg, S.,Genov, N.,Peters, K.,Fittkau, S.,Stoeva, S.,Wilson, K.S.,Betzel, C. Crystal structure of subtilisin DY, a random mutant of subtilisin Carlsberg. Eur.J.Biochem. 1998 257 309 318 2GAL CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH GALACTOSE 1998-07-13 1998-11-04 Leonidas, D.D.,Vatzaki, E.H.,Vorum, H.,Celis, J.E.,Madsen, P.,Acharya, K.R. Structural basis for the recognition of carbohydrates by human galectin-7. Biochemistry 1998 37 13930 13940 2PRC PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS (UBIQUINONE-2 COMPLEX) 1997-07-29 1998-11-11 Lancaster, C.R.,Michel, H. The coupling of light-induced electron transfer and proton uptake as derived from crystal structures of reaction centres from Rhodopseudomonas viridis modified at the binding site of the secondary quinone, QB. Structure 1997 5 1339 1359 1CQ4 CI2 MUTANT WITH TETRAGLUTAMINE (MGQQQQGM) REPLACING MET59 1998-11-17 1998-11-25 Chen, Y.W.,Stott, K.,Perutz, M.F. Crystal structure of a dimeric chymotrypsin inhibitor 2 mutant containing an inserted glutamine repeat. Proc.Natl.Acad.Sci.USA 1999 96 1257 1261 1AKU 12206666 D95A HYDROQUINONE FLAVODOXIN MUTANT FROM D. VULGARIS 1997-05-27 1998-12-02 McCarthy, A.A.,Walsh, M.A.,Verma, C.S.,O'Connell, D.P.,Reinhold, M.,Yalloway, G.N.,D'Arcy, D.,Higgins, T.M.,Voordouw, G.,Mayhew, S.G. Crystallographic investigation of the role of aspartate 95 in the modulation of the redox potentials of Desulfovibrio vulgaris flavodoxin. Biochemistry 2002 41 10950 10962 1B23 10368282 E. coli cysteinyl-tRNA and T. aquaticus elongation factor EF-TU:GTP ternary complex 1998-12-04 1998-12-07 Nissen, P.,Thirup, S.,Kjeldgaard, M.,Nyborg, J. The crystal structure of Cys-tRNACys-EF-Tu-GDPNP reveals general and specific features in the ternary complex and in tRNA. Structure Fold.Des. 1999 7 143 156 1B2S 10064711 STRUCTURAL RESPONSE TO MUTATION AT A PROTEIN-PROTEIN INTERFACE 1998-11-30 1998-12-08 Vaughan, C.K.,Buckle, A.M.,Fersht, A.R. Structural response to mutation at a protein-protein interface. J.Mol.Biol. 1999 286 1487 1506 1NKS ADENYLATE KINASE FROM SULFOLOBUS ACIDOCALDARIUS 1998-07-16 1998-12-09 Vonrhein, C.,Bonisch, H.,Schafer, G.,Schulz, G.E. The structure of a trimeric archaeal adenylate kinase. J.Mol.Biol. 1998 282 167 179 1B0Y 10531472 MUTANT H42Q OF HIPIP FROM CHROMATIUM VINOSUM AT 0.93A 1998-11-15 1998-12-16 Parisini, E.,Capozzi, F.,Lubini, P.,Lamzin, V.,Luchinat, C.,Sheldrick, G.M. Ab initio solution and refinement of two high-potential iron protein structures at atomic resolution. Acta Crystallogr.,Sect.D 1999 55 1773 1784 1B32 10438628 OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KMK 1998-12-15 1998-12-23 Sleigh, S.H.,Seavers, P.R.,Wilkinson, A.J.,Ladbury, J.E.,Tame, J.R. Crystallographic and calorimetric analysis of peptide binding to OppA protein. J.Mol.Biol. 1999 291 393 415 1B4D 10211820 AMIDOCARBAMATE INHIBITOR OF GLYCOGEN PHOSPHORYLASE 1998-12-18 1998-12-23 Tsitsanou, K.E.,Oikonomakos, N.G.,Zographos, S.E.,Skamnaki, V.T.,Gregoriou, M.,Watson, K.A.,Johnson, L.N.,Fleet, G.W. Effects of commonly used cryoprotectants on glycogen phosphorylase activity and structure. Protein Sci. 1999 8 741 749 1AYF BOVINE ADRENODOXIN (OXIDIZED) 1997-11-03 1998-12-30 Muller, A.,Muller, J.J.,Muller, Y.A.,Uhlmann, H.,Bernhardt, R.,Heinemann, U. New aspects of electron transfer revealed by the crystal structure of a truncated bovine adrenodoxin, Adx(4-108). Structure 1998 6 269 280 1A12 REGULATOR OF CHROMOSOME CONDENSATION (RCC1) OF HUMAN 1997-12-19 1999-01-13 Renault, L.,Nassar, N.,Vetter, I.,Becker, J.,Klebe, C.,Roth, M.,Wittinghofer, A. The 1.7 A crystal structure of the regulator of chromosome condensation (RCC1) reveals a seven-bladed propeller. Nature 1998 392 97 101 1B5F 10488111 NATIVE CARDOSIN A FROM CYNARA CARDUNCULUS L. 1999-01-06 1999-01-13 Frazao, C.,Bento, I.,Costa, J.,Soares, C.M.,Verissimo, P.,Faro, C.,Pires, E.,Cooper, J.,Carrondo, M.A. Crystal structure of cardosin A, a glycosylated and Arg-Gly-Asp-containing aspartic proteinase from the flowers of Cynara cardunculus L. J.Biol.Chem. 1999 274 27694 27701 1PSR HUMAN PSORIASIN (S100A7) 1997-11-27 1999-01-13 Brodersen, D.E.,Etzerodt, M.,Madsen, P.,Celis, J.E.,Thogersen, H.C.,Nyborg, J.,Kjeldgaard, M. EF-hands at atomic resolution: the structure of human psoriasin (S100A7) solved by MAD phasing. Structure 1998 6 477 489 1QKD ERABUTOXIN 1998-01-16 1999-02-16 Nastopoulos, V.,Kanellopoulos, P.N.,Tsernoglou, D. Structure of dimeric and monomeric erabutoxin a refined at 1.5 A resolution. Acta Crystallogr.,Sect.D 1998 54 964 974 1QKE ERABUTOXIN 1998-01-16 1999-02-16 Nastopoulos, V.,Kanellopoulos, P.N.,Tsernoglou, D. Structure of dimeric and monomeric erabutoxin a refined at 1.5 A resolution. Acta Crystallogr.,Sect.D 1998 54 964 974 2A39 HUMICOLA INSOLENS ENDOCELLULASE EGI NATIVE STRUCTURE 1998-01-30 1999-02-16 MacKenzie, L.F.,Sulzenbacher, G.,Divne, C.,Jones, T.A.,Woldike, H.F.,Schulein, M.,Withers, S.G.,Davies, G.J. Crystal structure of the family 7 endoglucanase I (Cel7B) from Humicola insolens at 2.2 A resolution and identification of the catalytic nucleophile by trapping of the covalent glycosyl-enzyme intermediate. Biochem.J. 1998 335 409 416 1B8D 10388620 CRYSTAL STRUCTURE OF A PHYCOUROBILIN-CONTAINING PHYCOERYTHRIN 1999-01-29 1999-02-18 Ritter, S.,Hiller, R.G.,Wrench, P.M.,Welte, W.,Diederichs, K. Crystal structure of a phycourobilin-containing phycoerythrin at 1.90-A resolution. J.Struct.Biol. 1999 126 86 97 1BOG ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH AN EPITOPE-HOMOLOGOUS PEPTIDE 1998-08-04 1999-03-23 Keitel, T.,Kramer, A.,Wessner, H.,Scholz, C.,Schneider-Mergener, J.,Hohne, W. Crystallographic analysis of anti-p24 (HIV-1) monoclonal antibody cross-reactivity and polyspecificity. Cell(Cambridge,Mass.) 1997 91 811 820 1HTA 11021968 CRYSTAL STRUCTURE OF THE HISTONE HMFA FROM METHANOTHERMUS FERVIDUS 1998-03-18 1999-03-23 Decanniere, K.,Babu, A.M.,Sandman, K.,Reeve, J.N.,Heinemann, U. Crystal structures of recombinant histones HMfA and HMfB from the hyperthermophilic archaeon Methanothermus fervidus. J.Mol.Biol. 2000 303 35 47 1NKD 10089502 ATOMIC RESOLUTION (1.07 ANGSTROMS) STRUCTURE OF THE ROP MUTANT <2AA> 1997-09-23 1999-03-23 Vlassi, M.,Dauter, Z.,Wilson, K.S.,Kokkinidis, M. Structural parameters for proteins derived from the atomic resolution (1.09 A) structure of a designed variant of the ColE1 ROP protein. Acta Crystallogr.,Sect.D 1998 54 1245 1260 1SM3 CRYSTAL STRUCTURE OF THE TUMOR SPECIFIC ANTIBODY SM3 COMPLEX WITH ITS PEPTIDE EPITOPE 1997-12-23 1999-03-23 Dokurno, P.,Bates, P.A.,Band, H.A.,Stewart, L.M.,Lally, J.M.,Burchell, J.M.,Taylor-Papadimitriou, J.,Snary, D.,Sternberg, M.J.,Freemont, P.S. Crystal structure at 1.95 A resolution of the breast tumour-specific antibody SM3 complexed with its peptide epitope reveals novel hypervariable loop recognition. J.Mol.Biol. 1998 284 713 728 1A59 COLD-ACTIVE CITRATE SYNTHASE 1998-02-20 1999-03-30 Russell, R.J.,Gerike, U.,Danson, M.J.,Hough, D.W.,Taylor, G.L. Structural adaptations of the cold-active citrate synthase from an Antarctic bacterium. Structure 1998 6 351 361 1CFN ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH AN EPITOPE-RELATED PEPTIDE 1999-03-19 1999-03-30 Keitel, T.,Kramer, A.,Wessner, H.,Scholz, C.,Schneider-Mergener, J.,Hohne, W. Crystallographic analysis of anti-p24 (HIV-1) monoclonal antibody cross-reactivity and polyspecificity. Cell(Cambridge,Mass.) 1997 91 811 820 1CFQ ANTI-P24 (HIV-1) FAB FRAGMENT CB41 1999-03-19 1999-03-30 Keitel, T.,Kramer, A.,Wessner, H.,Scholz, C.,Schneider-Mergener, J.,Hohne, W. Crystallographic analysis of anti-p24 (HIV-1) monoclonal antibody cross-reactivity and polyspecificity. Cell(Cambridge,Mass.) 1997 91 811 820 1DCI DIENOYL-COA ISOMERASE 1998-02-13 1999-03-30 Modis, Y.,Filppula, S.A.,Novikov, D.K.,Norledge, B.,Hiltunen, J.K.,Wierenga, R.K. The crystal structure of dienoyl-CoA isomerase at 1.5 A resolution reveals the importance of aspartate and glutamate sidechains for catalysis. Structure 1998 6 957 970 1CFS ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH AN EPITOPE-UNRELATED PEPTIDE 1999-03-19 1999-03-31 Keitel, T.,Kramer, A.,Wessner, H.,Scholz, C.,Schneider-Mergener, J.,Hohne, W. Crystallographic analysis of anti-p24 (HIV-1) monoclonal antibody cross-reactivity and polyspecificity. Cell(Cambridge,Mass.) 1997 91 811 820 1CFT ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH AN EPITOPE-UNRELATED D-PEPTIDE 1999-03-19 1999-03-31 Keitel, T.,Kramer, A.,Wessner, H.,Scholz, C.,Schneider-Mergener, J.,Hohne, W. Crystallographic analysis of anti-p24 (HIV-1) monoclonal antibody cross-reactivity and polyspecificity. Cell(Cambridge,Mass.) 1997 91 811 820 1CF9 10488114 Structure of the mutant VAL169CYS of catalase HPII from Escherichia coli 1999-03-24 1999-04-06 Mate, M.J.,Sevinc, M.S.,Hu, B.,Bujons, J.,Bravo, J.,Switala, J.,Ens, W.,Loewen, P.C.,Fita, I. Mutants that alter the covalent structure of catalase hydroperoxidase II from Escherichia coli. J.Biol.Chem. 1999 274 27717 27725 1B31 10029534 XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, NATIVE WITH PEG200 AS CRYOPROTECTANT 1998-12-15 1999-04-07 Schmidt, A.,Gubitz, G.M.,Kratky, C. Xylan binding subsite mapping in the xylanase from Penicillium simplicissimum using xylooligosaccharides as cryo-protectant. Biochemistry 1999 38 2403 2412 2PJR 10199404 HELICASE PRODUCT COMPLEX 1999-03-12 1999-04-08 Velankar, S.S.,Soultanas, P.,Dillingham, M.S.,Subramanya, H.S.,Wigley, D.B. Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism. Cell(Cambridge,Mass.) 1999 97 75 98 3PJR 10199404 HELICASE SUBSTRATE COMPLEX 1999-03-12 1999-04-08 Velankar, S.S.,Soultanas, P.,Dillingham, M.S.,Subramanya, H.S.,Wigley, D.B. Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism Cell(Cambridge,Mass.) 1999 97 75 98 1MAA MOUSE ACETYLCHOLINESTERASE CATALYTIC DOMAIN, GLYCOSYLATED PROTEIN 1998-11-04 1999-04-20 Bourne, Y.,Taylor, P.,Bougis, P.E.,Marchot, P. Crystal structure of mouse acetylcholinesterase. A peripheral site-occluding loop in a tetrameric assembly. J.Biol.Chem. 1999 274 2963 2970 1NNO CONFORMATIONAL CHANGES OCCURRING UPON NO BINDING IN NITRITE REDUCTASE FROM PSEUDOMONAS AERUGINOSA 1998-07-20 1999-04-27 Nurizzo, D.,Cutruzzola, F.,Arese, M.,Bourgeois, D.,Brunori, M.,Cambillau, C.,Tegoni, M. Conformational changes occurring upon reduction and NO binding in nitrite reductase from Pseudomonas aeruginosa. Biochemistry 1998 37 13987 13996 2PMT GLUTATHIONE TRANSFERASE FROM PROTEUS MIRABILIS 1998-04-28 1999-04-27 Rossjohn, J.,Polekhina, G.,Feil, S.C.,Allocati, N.,Masulli, M.,De Illio, C.,Parker, M.W. A mixed disulfide bond in bacterial glutathione transferase: functional and evolutionary implications. Structure 1998 6 721 734 1CJC 10369776 STRUCTURE OF ADRENODOXIN REDUCTASE OF MITOCHONDRIAL P450 SYSTEMS 1999-04-12 1999-04-30 Ziegler, G.A.,Vonrhein, C.,Hanukoglu, I.,Schulz, G.E. The structure of adrenodoxin reductase of mitochondrial P450 systems: electron transfer for steroid biosynthesis. J.Mol.Biol. 1999 289 981 990 1BR9 HUMAN TISSUE INHIBITOR OF METALLOPROTEINASE-2 1998-08-28 1999-05-04 Tuuttila, A.,Morgunova, E.,Bergmann, U.,Lindqvist, Y.,Maskos, K.,Fernandez-Catalan, C.,Bode, W.,Tryggvason, K.,Schneider, G. Three-dimensional structure of human tissue inhibitor of metalloproteinases-2 at 2.1 A resolution. J.Mol.Biol. 1998 284 1133 1140 1MDV KEY ROLE OF PHENYLALANINE 20 IN CYTOCHROME C3: STRUCTURE, STABILITY AND FUNCTION STUDIES 1998-09-08 1999-05-04 Dolla, A.,Arnoux, P.,Protasevich, I.,Lobachov, V.,Brugna, M.,Giudici-Orticoni, M.T.,Haser, R.,Czjzek, M.,Makarov, A.,Bruschi, M. Key role of phenylalanine 20 in cytochrome c3: structure, stability, and function studies. Biochemistry 1999 38 33 41 1CKU 10531472 AB INITIO SOLUTION AND REFINEMENT OF TWO HIGH POTENTIAL IRON PROTEIN STRUCTURES AT ATOMIC RESOLUTION 1999-04-24 1999-05-13 Parisini, E.,Capozzi, F.,Lubini, P.,Lamzin, V.,Luchinat, C.,Sheldrick, G.M. Ab initio solution and refinement of two high-potential iron protein structures at atomic resolution. Acta Crystallogr.,Sect.D 1999 55 1773 1784 1QFS PROLYL OLIGOPEPTIDASE FROM PORCINE MUSCLE WITH COVALENTLY BOUND INHIBITOR Z-PRO-PROLINAL 1999-04-13 1999-05-13 Fulop, V.,Bocskei, Z.,Polgar, L. Prolyl oligopeptidase: an unusual beta-propeller domain regulates proteolysis. Cell(Cambridge,Mass.) 1998 94 161 170 434D 10334337 5'-R(*UP*AP*GP*CP*UP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3' 1998-10-23 1999-06-14 Mueller, U.,Schubel, H.,Sprinzl, M.,Heinemann, U. Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1.16 A resolution. RNA 1999 5 670 677 1BYI 10089457 STRUCTURE OF APO-DETHIOBIOTIN SYNTHASE AT 0.97 ANGSTROMS RESOLUTION 1998-10-15 1999-06-15 Sandalova, T.,Schneider, G.,Kack, H.,Lindqvist, Y. Structure of dethiobiotin synthetase at 0.97 A resolution. Acta Crystallogr.,Sect.D 1999 55 610 624 1QQR CRYSTAL STRUCTURE OF STREPTOKINASE DOMAIN B 1999-06-07 1999-06-17 Spraggon, G.,Zhang, X.X.,Ponting, C.P.,Fox, V.F.,Phillips, C.,Smith, R.A.G.,Jones, E.Y.,Dobson, C.,Stuart, D.I. Crystal Structure of Streptokinse Domain B To be Published 0 0 0 0 1NF1 THE GAP RELATED DOMAIN OF NEUROFIBROMIN 1998-07-08 1999-07-20 Scheffzek, K.,Ahmadian, M.R.,Wiesmuller, L.,Kabsch, W.,Stege, P.,Schmitz, F.,Wittinghofer, A. Structural analysis of the GAP-related domain from neurofibromin and its implications. EMBO J. 1998 17 4313 4327 1BQC BETA-MANNANASE FROM THERMOMONOSPORA FUSCA 1998-08-12 1999-08-13 Hilge, M.,Gloor, S.M.,Rypniewski, W.,Sauer, O.,Heightman, T.D.,Zimmermann, W.,Winterhalter, K.,Piontek, K. High-resolution native and complex structures of thermostable beta-mannanase from Thermomonospora fusca - substrate specificity in glycosyl hydrolase family 5. Structure 1998 6 1433 1444 466D 10417408 DISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIX 1999-04-14 1999-08-16 Mueller, U.,Muller, Y.A.,Herbst-Irmer, R.,Sprinzl, M.,Heinemann, U. Disorder and twin refinement of RNA heptamer double helices. Acta Crystallogr.,Sect.D 1999 55 1405 1413 1QDL 10449718 THE CRYSTAL STRUCTURE OF ANTHRANILATE SYNTHASE FROM SULFOLOBUS SOLFATARICUS 1999-05-20 1999-08-18 Knochel, T.,Ivens, A.,Hester, G.,Gonzalez, A.,Bauerle, R.,Wilmanns, M.,Kirschner, K.,Jansonius, J.N. The crystal structure of anthranilate synthase from Sulfolobus solfataricus: functional implications. Proc.Natl.Acad.Sci.USA 1999 96 9479 9484 1RK2 10438599 E. COLI RIBOKINASE COMPLEXED WITH RIBOSE AND ADP, SOLVED IN SPACE GROUP P212121 1999-05-20 1999-09-01 Sigrell, J.A.,Cameron, A.D.,Mowbray, S.L. Induced fit on sugar binding activates ribokinase. J.Mol.Biol. 1999 290 1009 1018 1QH3 10508780 HUMAN GLYOXALASE II WITH CACODYLATE AND ACETATE IONS PRESENT IN THE ACTIVE SITE 1999-05-10 1999-09-24 Cameron, A.D.,Ridderstrom, M.,Olin, B.,Mannervik, B. Crystal structure of human glyoxalase II and its complex with a glutathione thiolester substrate analogue. Structure Fold.Des. 1999 7 1067 1078 1QJ9 10545325 CRYSTAL STRUCTURE OF THE OUTER MEMBRANE PROTEIN OMPX FROM ESCHERICHIA COLI 1999-06-23 1999-10-06 Vogt, J.,Schulz, G.E. The structure of the outer membrane protein OmpX from Escherichia coli reveals possible mechanisms of virulence. Structure 1999 7 1301 1309 463D 10455145 CALCIUM FORM OF D(CGCGAATTCGCG)2 1999-03-29 1999-10-08 Liu, J.,Subirana, J.A. Structure of d(CGCGAATTCGCG) in the presence of Ca(2+) ions. J.Biol.Chem. 1999 274 24749 24752 1QJ8 10545325 CRYSTAL STRUCTURE OF THE OUTER MEMBRANE PROTEIN OMPX FROM ESCHERICHIA COLI 1999-06-23 1999-10-10 Vogt, J.,Schulz, G.E. The Structure of the Outer Membrane Protein Ompx from Escherichia Coli Reveals Mechanisms of Virulence Structure 1999 7 1301 0 2YAS 10548044 HYDROXYNITRILE LYASE FROM HEVEA BRASILIENSIS COMPLEXED WITH RHODANIDE 1999-03-11 1999-10-13 Zuegg, J.,Gruber, K.,Gugganig, M.,Wagner, U.G.,Kratky, C. Three-dimensional structures of enzyme-substrate complexes of the hydroxynitrile lyase from Hevea brasiliensis. Protein Sci. 1999 8 1990 2000 1BX3 10211820 EFFECTS OF COMMONLY USED CRYOPROTECTANTS ON GLYCOGEN PHOSPHORYLASE ACTIVITY AND STRUCTURE 1999-10-13 1999-10-21 Tsitsanou, K.E.,Oikonomakos, N.G.,Zographos, S.E.,Skamnaki, V.T.,Gregoriou, M.,Watson, K.A.,Johnson, L.N.,Fleet, G.W. Effects of commonly used cryoprotectants on glycogen phosphorylase activity and structure. Protein Sci. 1999 8 741 749 1QD5 10537112 OUTER MEMBRANE PHOSPHOLIPASE A FROM ESCHERICHIA COLI 1999-07-09 1999-10-25 Snijder, H.J.,Ubarretxena-Belandia, I.,Blaauw, M.,Kalk, K.H.,Verheij, H.M.,Egmond, M.R.,Dekker, N.,Dijkstra, B.W. Structural evidence for dimerization-regulated activation of an integral membrane phospholipase. Nature 1999 401 717 721 1QQ7 10521454 STRUCTURE OF L-2-HALOACID DEHALOGENASE FROM XANTHOBACTER AUTOTROPHICUS WITH CHLOROPROPIONIC ACID COVALENTLY BOUND 1999-06-11 1999-10-25 Ridder, I.S.,Rozeboom, H.J.,Kalk, K.H.,Dijkstra, B.W. Crystal structures of intermediates in the dehalogenation of haloalkanoates by L-2-haloacid dehalogenase. J.Biol.Chem. 1999 274 30672 30678 1QH8 10525412 NITROGENASE MOFE PROTEIN FROM KLEBSIELLA PNEUMONIAE, AS-CRYSTALLIZED (MIXED OXIDATION) STATE 1999-05-11 1999-11-01 Mayer, S.M.,Lawson, D.M.,Gormal, C.A.,Roe, S.M.,Smith, B.E. New insights into structure-function relationships in nitrogenase: A 1.6 A resolution X-ray crystallographic study of Klebsiella pneumoniae MoFe-protein. J.Mol.Biol. 1999 292 871 891 2NLR 10200171 STREPTOMYCES LIVIDANS ENDOGLUCANASE (EC: 3.2.1.4) COMPLEX WITH MODIFIED GLUCOSE TRIMER 1998-11-02 1999-11-10 Sulzenbacher, G.,Mackenzie, L.F.,Wilson, K.S.,Withers, S.G.,Dupont, C.,Davies, G.J. The crystal structure of a 2-fluorocellotriosyl complex of the Streptomyces lividans endoglucanase CelB2 at 1.2 A resolution. Biochemistry 1999 38 4826 4833 1QOO 10966800 lectin UEA-II complexed with NAG 1999-11-15 1999-11-23 Loris, R.,De Greve, H.,Dao-Thi, M.-H.,Messens, J.,Imberty, A.,Wyns, L. Structural Basis of Carbohydrate Recognition by Lectin II from Ulex Europaeus, a Protein with a Promiscuous Carbohydrate Binding Site J.Mol.Biol. 2000 301 987 0 1QOT 10966800 lectin UEA-II complexed with fucosyllactose and fucosylgalactose 1999-11-16 1999-11-23 Loris, R.,De Greve, H.,Dao-Thi, M.-H.,Messens, J.,Imberty, A.,Wyns, L. Structural Basis of Carbohydrate Recognition by Lectin II from Ulex Europaeus, a Protein with a Promiscuous Carbohydrate Binding Site J.Mol.Biol. 2000 301 987 0 1QIP 10521255 HUMAN GLYOXALASE I COMPLEXED WITH S-P-NITROBENZYLOXYCARBONYLGLUTATHIONE 1999-06-14 1999-11-24 Cameron, A.D.,Ridderstrom, M.,Olin, B.,Kavarana, M.J.,Creighton, D.J.,Mannervik, B. Reaction mechanism of glyoxalase I explored by an X-ray crystallographic analysis of the human enzyme in complex with a transition state analogue. Biochemistry 1999 38 13480 13490 473D 10610787 NI2+/GUANINE INTERACTIONS AND NETROPSIN/GUANINE STACKING IN D(CGTATATACG)2 1999-05-18 1999-12-02 Abrescia, N.G.,Malinina, L.,Subirana, J.A. Stacking interaction of guanine with netropsin in the minor groove of d(CGTATATACG)2. J.Mol.Biol. 1999 294 657 666 2TMG 10366510 THERMOTOGA MARITIMA GLUTAMATE DEHYDROGENASE MUTANT S128R, T158E, N117R, S160E 1998-12-04 1999-12-08 Lebbink, J.H.,Knapp, S.,van der Oost, J.,Rice, D.,Ladenstein, R.,de Vos, W.M. Engineering activity and stability of Thermotoga maritima glutamate dehydrogenase. II: construction of a 16-residue ion-pair network at the subunit interface. J.Mol.Biol. 1999 289 357 369 1QE5 10600382 PURINE NUCLEOSIDE PHOSPHORYLASE FROM CELLULOMONAS SP. IN COMPLEX WITH PHOSPHATE 1999-07-13 1999-12-12 Tebbe, J.,Bzowska, A.,Wielgus-Kutrowska, B.,Schroder, W.,Kazimierczuk, Z.,Shugar, D.,Saenger, W.,Koellner, G. Crystal structure of the purine nucleoside phosphorylase (PNP) from Cellulomonas sp. and its implication for the mechanism of trimeric PNPs. J.Mol.Biol. 1999 294 1239 1255 1D3C 10574960 MICHAELIS COMPLEX OF BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE WITH GAMMA-CYCLODEXTRIN 1999-09-29 1999-12-22 Uitdehaag, J.C.,Kalk, K.H.,van Der Veen, B.A.,Dijkhuizen, L.,Dijkstra, B.W. The cyclization mechanism of cyclodextrin glycosyltransferase (CGTase) as revealed by a gamma-cyclodextrin-CGTase complex at 1.8-A resolution. J.Biol.Chem. 1999 274 34868 34876 1BY4 10669605 STRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNA 1998-10-22 2000-01-12 Zhao, Q.,Chasse, S.A.,Devarakonda, S.,Sierk, M.L.,Ahvazi, B.,Rastinejad, F. Structural basis of RXR-DNA interactions. J.Mol.Biol. 2000 296 509 520 8A3H Cellobiose-derived imidazole complex of the endoglucanase cel5A from Bacillus agaradhaerens at 0.97 A resolution 1999-01-20 2000-01-21 Varrot, A.,Schulein, M.,Pipelier, M.,Vasella, A.,Davies, G.J. Lateral Protonation of a Glycosidase Inhibitor. Structure of the Bacillus agaradhaerens Cel5A in Complex with a Cellobiose-Derived Imidazole at 0.97 A Resolution J.Am.Chem.Soc. 1999 121 2621 2622 1DYM Humicola insolens Endocellulase Cel7B (EG 1) E197A Mutant 2000-02-03 2000-02-04 MacKenzie, L.F.,Sulzenbacher, G.,Divne, C.,Jones, T.A.,Woldike, H.F.,Schulein, M.,Withers, S.G.,Davies, G.J. Crystal structure of the family 7 endoglucanase I (Cel7B) from Humicola insolens at 2.2 A resolution and identification of the catalytic nucleophile by trapping of the covalent glycosyl-enzyme intermediate. Biochem.J. 1998 335 409 416 1QL3 10623555 Structure of the soluble domain of cytochrome c552 from Paracoccus denitrificans in the reduced state 1999-08-20 2000-02-06 Harrenga, A.,Reincke, B.,Rueterjans, H.,Ludwig, B.,Michel, H. Structure of the Soluble Domain of Cytochrome C552 from Paracoccus Denitrificans in the Oxidized and Reduced States J.Mol.Biol. 2000 295 667 0 1QOS 10966800 lectin UEA-II complexed with chitobiose 1999-11-16 2000-02-07 Loris, R.,De Greve, H.,Dao-Thi, M.-H.,Messens, J.,Imberty, A.,Wyns, L. Structural Basis of Carbohydrate Recognition by Lectin II from Ulex Europaeus, a Protein with a Promiscuous Carbohydrate Binding Site J.Mol.Biol. 2000 301 987 0 1EDQ 12554965 CRYSTAL STRUCTURE OF CHITINASE A FROM S. MARCESCENS AT 1.55 ANGSTROMS 2000-01-28 2000-02-18 Papanikolau, Y.,Tavlas, G.,Vorgias, C.E.,Petratos, K. De novo purification scheme and crystallization conditions yield high-resolution structures of chitinase A and its complex with the inhibitor allosamidin. Acta Crystallogr.,Sect.D 2003 59 400 403 1DTO 10693813 CRYSTAL STRUCTURE OF THE COMPLETE TRANSACTIVATION DOMAIN OF E2 PROTEIN FROM THE HUMAN PAPILLOMAVIRUS TYPE 16 2000-01-13 2000-02-23 Antson, A.A.,Burns, J.E.,Moroz, O.V.,Scott, D.J.,Sanders, C.M.,Bronstein, I.B.,Dodson, G.G.,Wilson, K.S.,Maitland, N.J. Structure of the intact transactivation domain of the human papillomavirus E2 protein. Nature 2000 403 805 809 1QBI 10366508 SOLUBLE QUINOPROTEIN GLUCOSE DEHYDROGENASE FROM ACINETOBACTER CALCOACETICUS 1999-04-22 2000-02-25 Oubrie, A.,Rozeboom, H.J.,Kalk, K.H.,Duine, J.A.,Dijkstra, B.W. The 1.7 A crystal structure of the apo form of the soluble quinoprotein glucose dehydrogenase from Acinetobacter calcoaceticus reveals a novel internal conserved sequence repeat. J.Mol.Biol. 1999 289 319 333 1CB7 10467146 GLUTAMATE MUTASE FROM CLOSTRIDIUM COCHLEARIUM RECONSTITUTED WITH METHYL-COBALAMIN 1999-03-03 2000-02-28 Reitzer, R.,Gruber, K.,Jogl, G.,Wagner, U.G.,Bothe, H.,Buckel, W.,Kratky, C. Glutamate mutase from Clostridium cochlearium: the structure of a coenzyme B12-dependent enzyme provides new mechanistic insights. Structure Fold.Des. 1999 7 891 902 1CCW 10467146 STRUCTURE OF THE COENZYME B12 DEPENDENT ENZYME GLUTAMATE MUTASE FROM CLOSTRIDIUM COCHLEARIUM 1999-03-01 2000-03-01 Reitzer, R.,Gruber, K.,Jogl, G.,Wagner, U.G.,Bothe, H.,Buckel, W.,Kratky, C. Glutamate mutase from Clostridium cochlearium: the structure of a coenzyme B12-dependent enzyme provides new mechanistic insights Structure Fold.Des. 1999 7 891 902 1D0L 10684641 THE ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35 IN COMPLEX WITH BULGECIN A 1999-09-12 2000-03-06 van Asselt, E.J.,Kalk, K.H.,Dijkstra, B.W. Crystallographic studies of the interactions of Escherichia coli lytic transglycosylase Slt35 with peptidoglycan. Biochemistry 2000 39 1924 1934 1QNJ 10739939 THE STRUCTURE OF NATIVE PORCINE PANCREATIC ELASTASE AT ATOMIC RESOLUTION (1.1 A) 1999-10-15 2000-03-31 Wurtele, M.,Hahn, M.,Hilpert, K.,Hohne, W. Atomic Resolution Structure of Native Porcine Pancreatic Elastase at 1.1 A Acta Crystallogr.,Sect.D 2000 56 520 0 1E0Y 10920192 Structure of the D170S/T457E double mutant of vanillyl-alcohol oxidase 2000-04-11 2000-04-12 Van Der Heuvel, R.H.H.,Fraaije, M.W.,Espinosa, M.F.,Mattevi, A.,Van Berkel, W.J.H. Inversion of Stereospecificity in Vanillyl-Alcohol Oxidase Proc.Natl.Acad.Sci.USA 2000 97 9455 0 1EK0 10756108 GPPNHP-BOUND YPT51 AT 1.48 A RESOLUTION 2000-03-06 2000-04-17 Esters, H.,Alexandrov, K.,Constantinescu, A.T.,Goody, R.S.,Scheidig, A.J. High-resolution crystal structure of S. cerevisiae Ypt51(DeltaC15)-GppNHp, a small GTP-binding protein involved in regulation of endocytosis. J.Mol.Biol. 2000 298 111 121 1ELQ 10760256 CRYSTAL STRUCTURE OF THE CYSTINE C-S LYASE C-DES 2000-03-14 2000-04-19 Clausen, T.,Kaiser, J.T.,Steegborn, C.,Huber, R.,Kessler, D. Crystal structure of the cystine C-S lyase from Synechocystis: stabilization of cysteine persulfide for FeS cluster biosynthesis. Proc.Natl.Acad.Sci.USA 2000 97 3856 3861 1ELU 10760256 COMPLEX BETWEEN THE CYSTINE C-S LYASE C-DES AND ITS REACTION PRODUCT CYSTEINE PERSULFIDE. 2000-03-14 2000-04-19 Clausen, T.,Kaiser, J.T.,Steegborn, C.,Huber, R.,Kessler, D. Crystal structure of the cystine C-S lyase from Synechocystis: stabilization of cysteine persulfide for FeS cluster biosynthesis. Proc.Natl.Acad.Sci.USA 2000 97 3856 3861 1DLK 10713514 CRYSTAL STRUCTURE ANALYSIS OF DELTA-CHYMOTRYPSIN BOUND TO A PEPTIDYL CHLOROMETHYL KETONE INHIBITOR 1999-12-10 2000-05-03 Mac Sweeney, A.,Birrane, G.,Walsh, M.A.,O'Connell, T.,Malthouse, J.P.,Higgins, T.M. Crystal structure of delta-chymotrypsin bound to a peptidyl chloromethyl ketone inhibitor. Acta Crystallogr.,Sect.D 2000 56 280 286 1ENN 10749874 SOLVENT ORGANIZATION IN AN OLIGONUCLEOTIDE CRYSTAL: THE STRUCTURE OF D(GCGAATTCG)2 AT ATOMIC RESOLUTION 2000-03-21 2000-05-03 Soler-Lopez, M.,Malinina, L.,Subirana, J.A. Solvent organization in an oligonucleotide crystal. The structure of d(GCGAATTCG)2 at atomic resolution. J.Biol.Chem. 2000 275 23034 23044 1EQY COMPLEX BETWEEN RABBIT MUSCLE ALPHA-ACTIN: HUMAN GELSOLIN DOMAIN 1 2000-04-06 2000-05-03 McLaughlin, P.J.,Gooch, J.T.,Mannherz, H.G.,Weeds, A.G. Structure of gelsolin segment 1-actin complex and the mechanism of filament severing. Nature 1993 364 685 692 1EUW 11375495 ATOMIC RESOLUTION STRUCTURE OF E. COLI DUTPASE 2000-04-17 2000-05-03 Gonzalez, A.,Larsson, G.,Persson, R.,Cedergren-Zeppezauer, E. Atomic resolution structure of Escherichia coli dUTPase determined ab initio. Acta Crystallogr.,Sect.D 2001 57 767 774 1E0C 10788330 SULFURTRANSFERASE FROM AZOTOBACTER VINELANDII 2000-03-23 2000-05-08 Bordo, D.,Deriu, D.,Colnaghi, R.,Carpen, A.,Pagani, S.,Bolognesi, M. The Crystal Structure of a Sulfurtransferase from Azotobacter Vinelandii Highlights the Evolutionary Relationship between the Rhodanese and Phosphatase Enzyme Families J.Mol.Biol. 2000 298 691 0 1CS6 10830169 N-TERMINAL FRAGMENT OF AXONIN-1 FROM CHICKEN 1999-08-17 2000-05-19 Freigang, J.,Proba, K.,Leder, L.,Diederichs, K.,Sonderegger, P.,Welte, W. The crystal structure of the ligand binding module of axonin-1/TAG-1 suggests a zipper mechanism for neural cell adhesion. Cell(Cambridge,Mass.) 2000 101 425 433 1C8L 11368311 SYNERGISTIC INHIBITION OF GLYCOGEN PHOSPHORYLASE A BY A POTENTIAL ANTIDIABETIC DRUG AND CAFFEINE 2000-05-16 2000-05-31 Tsitsanou, K.E.,Skamnaki, V.T.,Oikonomakos, N.G. Structural basis of the synergistic inhibition of glycogen phosphorylase a by caffeine and a potential antidiabetic drug. Arch.Biochem.Biophys. 2000 384 245 254 1DLI 10841783 THE FIRST STRUCTURE OF UDP-GLUCOSE DEHYDROGENASE (UDPGDH) REVEALS THE CATALYTIC RESIDUES NECESSARY FOR THE TWO-FOLD OXIDATION 1999-12-09 2000-05-31 Campbell, R.E.,Mosimann, S.C.,van De Rijn, I.,Tanner, M.E.,Strynadka, N.C. The first structure of UDP-glucose dehydrogenase reveals the catalytic residues necessary for the two-fold oxidation. Biochemistry 2000 39 7012 7023 1E0K 10892646 gp4d helicase from phage T7 2000-03-30 2000-06-09 Singleton, M.R.,Sawaya, M.R.,Ellenberger, T.,Wigley, D.B. Crystal Structure of T7 Gene 4 Ring Helicase Indicates a Mechanism for Sequential Hydrolysis of Nucleotides Cell(Cambridge,Mass.) 2000 101 589 0 1DZQ 10966800 LECTIN UEA-II COMPLEXED WITH GALACTOSE 2000-03-07 2000-06-22 Loris, R.,De Greve, H.,Dao-Thi, M.-H.,Messens, J.,Imberty, A.,Wyns, L. Structural Basis of Carbohydrate Recognition by Lectin II from Ulex Europaeus, a Protein with a Promiscuous Carbohydrate Binding Site J.Mol.Biol. 2000 301 987 0 1QJ5 10452893 Crystal structure of 7,8-diaminopelargonic acid synthase 1999-06-21 2000-06-22 Kack, H.,Sandmark, J.,Gibson, K.J.,Schneider, G.,Lindqvist, Y. Crystal Structure of Diaminopelargonic Acid Synthase; Evolutionary Relationships between Pyridoxal-5'-Phosphate Dependent Enzymes J.Mol.Biol. 1999 291 857 0 1D2S 10675319 CRYSTAL STRUCTURE OF THE N-TERMINAL LAMININ G-LIKE DOMAIN OF SHBG IN COMPLEX WITH DIHYDROTESTOSTERONE 1999-09-28 2000-06-28 Grishkovskaya, I.,Avvakumov, G.V.,Sklenar, G.,Dales, D.,Hammond, G.L.,Muller, Y.A. Crystal structure of human sex hormone-binding globulin: steroid transport by a laminin G-like domain. EMBO J. 2000 19 504 512 1C8U 10876240 CRYSTAL STRUCTURE OF THE E.COLI THIOESTERASE II, A HOMOLOGUE OF THE HUMAN NEF-BINDING ENZYME 1999-07-29 2000-07-14 Li, J.,Derewenda, U.,Dauter, Z.,Smith, S.,Derewenda, Z.S. Crystal structure of the Escherichia coli thioesterase II, a homolog of the human Nef binding enzyme. Nat.Struct.Biol. 2000 7 555 559 1QJV 11162105 Pectin methylesterase PemA from Erwinia chrysanthemi 1999-07-05 2000-07-14 Jenkins, J.,Mayans, O.,Smith, D.,Worboys, K.,Pickersgill, R. Three-Dimensional Structure of Erwinia Chrysanthemi Pectin Methylesterase Reveals a Novel Esterase Active Site J.Mol.Biol. 2001 305 951 0 1E1T 10913247 LYSYL-TRNA SYNTHETASE (LYSU) HEXAGONAL FORM COMPLEXED WITH THE LYSYL_ADENYLATE INTERMEDIATE 2000-05-10 2000-07-28 Desogus, G.,Todone, F.,Brick, P.,Onesti, S. Active Site of Lysyl-tRNA Synthetase: Structural Studies of the Adenylation Reaction Biochemistry 2000 39 8418 0 1QKN 10469641 RAT OESTROGEN RECEPTOR BETA LIGAND-BINDING DOMAIN IN COMPLEX WITH ANTAGONIST RALOXIFENE 1999-07-27 2000-07-28 Pike, A.C.W.,Brzozowski, A.M.,Hubbard, R.E.,Bonn, T.,Thorsell, A.-G.,Engstrom, O.,Ljunggren, J.,Gustaffson, J.-A.,Carlquist, M. Structure of the Ligand-Binding Domain of Oestrogen Receptor Beta in the Presence of a Partial Agonist and a Full Antagonist Embo J. 1999 18 4608 0 1QMV 10873855 thioredoxin peroxidase B from red blood cells 1999-10-07 2000-07-28 Schroder, E.,Littlechild, J.A.,Lebedev, A.A.,Errington, N.,Vagin, A.A.,Isupov, M.N. Crystal Structure of Decameric 2-Cys Peroxiredoxin from Human Erythrocytes at 1.7 A Resolution. Structure 2000 8 605 0 1QKW 11206053 Alpha-spectrin Src Homology 3 domain, N47G mutant in the distal loop. 1999-08-16 2000-08-18 Vega, M.C.,Martinez, J.C.,Serrano, L. Thermodynamic and structural characterization of Asn and Ala residues in the disallowed II' region of the Ramachandran plot. Protein Sci. 2000 9 2322 2328 1EM0 10920199 COMPLEX OF D(CCTAGG) WITH TETRA-[N-METHYL-PYRIDYL] PORPHYRIN 2000-03-14 2000-08-21 Bennett, M.,Krah, A.,Wien, F.,Garman, E.,McKenna, R.,Sanderson, M.,Neidle, S. A DNA-porphyrin minor-groove complex at atomic resolution: the structural consequences of porphyrin ruffling. Proc.Natl.Acad.Sci.USA 2000 97 9476 9481 1C7S 10884356 BETA-N-ACETYLHEXOSAMINIDASE MUTANT D539A COMPLEXED WITH DI-N-ACETYL-BETA-D-GLUCOSAMINE (CHITOBIASE) 2000-03-14 2000-09-20 Prag, G.,Papanikolau, Y.,Tavlas, G.,Vorgias, C.E.,Petratos, K.,Oppenheim, A.B. Structures of chitobiase mutants complexed with the substrate Di-N-acetyl-d-glucosamine: the catalytic role of the conserved acidic pair, aspartate 539 and glutamate 540. J.Mol.Biol. 2000 300 611 617 1FPN 10903863 HUMAN RHINOVIRUS SEROTYPE 2 (HRV2) 2000-08-31 2000-09-20 Verdaguer, N.,Blaas, D.,Fita, I. Structure of human rhinovirus serotype 2 (HRV2). J.Mol.Biol. 2000 300 1179 1194 1FQ7 11061973 X-RAY STRUCTURE OF INHIBITOR CP-72,647 BOUND TO SACCHAROPEPSIN 2000-09-04 2000-09-20 Cronin, N.B.,Badasso, M.O.,J Tickle, I.,Dreyer, T.,Hoover, D.J.,Rosati, R.L.,Humblet, C.C.,Lunney, E.A.,Cooper, J.B. X-ray structures of five renin inhibitors bound to saccharopepsin: exploration of active-site specificity. J.Mol.Biol. 2000 303 745 760 1E8G 10984479 STRUCTURE OF THE H61T DOUBLE MUTANT OF VANILLYL-ALCOHOL OXIDASE IN COMPLEX WITH FLUORO-CRESOL 2000-09-20 2000-09-21 Fraaije, M.W.,Van Der Heuvel, R.H.H.,Van Berkel, W.J.H.,Mattevi, A. Structural Analysis of Flavinylation in Vanillyl-Alcohol Oxidase J.Biol.Chem. 2001 275 38654 0 1E5T 11256612 PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN, MUTANT 2000-08-02 2000-10-01 Fulop, V.,Szeltner, Z.,Polgar, L. Catalysis of Serine Oligopeptidases is Controlled by a Gating Filter Mechanism Embo Rep. 2000 1 277 0 1QMU 10545093 Duck carboxypeptidase D domain II 1999-10-06 2000-10-13 Gomis-Rueth, F.X.,Companys, V.,Qian, Y.,Fricker, L.D.,Vendrell, J.,Aviles, F.X.,Coll, M. Crystal Structure of Avian Carboxypeptidase D Domain II : A Prototype for the Regulatory Metallocarboxypeptidase Subfamily Embo J. 1999 18 5817 0 1QNO 10666621 The 3-D structure of a Trichoderma reesei b-mannanase from glycoside hydrolase family 5 1999-10-20 2000-10-22 Sabini, E.,Schubert, H.,Murshudov, G.,Wilson, K.S.,Siika-Aho, M.,Penttila, M. The Three-Dimensional Structure of a Trichoderma Reesei Beta-Mannanase from Glycoside Hydrolase Family 5. Acta Crystallogr.,Sect.D 2000 56 3 0 1G2B 11173498 ALPHA-SPECTRIN SRC HOMOLOGY 3 DOMAIN, CIRCULAR PERMUTANT, CUT AT N47-D48 2000-10-18 2000-11-01 Berisio, R.,Viguera, A.,Serrano, L.,Wilmanns, M. Atomic resolution structure of a mutant of the spectrin SH3 domain. Acta Crystallogr.,Sect.D 2001 57 337 340 1E2H 11056041 The nucleoside binding site of Herpes simplex type 1 thymidine kinase analyzed by X-ray crystallography 2000-05-23 2000-11-06 Vogt, J.,Perozzo, R.,Pautsch, A.,Prota, A.,Schelling, P.,Pilger, B.,Folkers, G.,Scapozza, L.,Schulz, G.E. Nucleoside Binding Site of Herpes Simplex Type 1 Thymidine Kinase Analyzed by X-Ray Crystallography Proteins: Struct.,Funct., Gene 2000 41 545 0 1FF9 11080625 APO SACCHAROPINE REDUCTASE 2000-07-25 2000-11-08 Johansson, E.,Steffens, J.J.,Lindqvist, Y.,Schneider, G. Crystal structure of saccharopine reductase from Magnaporthe grisea, an enzyme of the alpha-aminoadipate pathway of lysine biosynthesis. Structure Fold.Des. 2000 8 1037 1047 1QOL STRUCTURE OF THE FMDV LEADER PROTEASE 1999-11-13 2000-11-10 Guarne, A.,Tormo, J.,Kirchweger, R.,Pfistermueller, D.,Fita, I.,Skern, T. Structure of the Foot-and-Mouth Disease Virus Leader Protease: A Papain-Like Fold Adapted for Self-Processing and Eif4G Recognition. Embo J. 1998 17 7469 0 1QOP 10600108 CRYSTAL STRUCTURE OF WILD-TYPE TRYPTOPHAN SYNTHASE COMPLEXED WITH INDOLE PROPANOL PHOSPHATE 1999-11-15 2000-11-10 Weyand, M.,Schlichting, I. Crystal Structure of Wild-Type Tryptophan Synthase Complexed with the Natural Substrate Indole-3-Glycerol Phosphate Biochemistry 1999 38 16469 0 1E5D 11062560 RUBREDOXIN OXYGEN:OXIDOREDUCTASE (ROO) FROM ANAEROBE DESULFOVIBRIO GIGAS 2000-07-24 2000-11-17 Frazao, C.,Silva, G.,Gomes, C.M.,Matias, P.,Coelho, R.,Sieker, L.,Macedo, S.,Liu, M.Y.,Oliveira, S.,Teixeira, M.,Xavier, A.V.,Rodrigues-Pousada, C.,Carrondo, M.A.,Le Gall, J. Structure of a Dioxygen Reduction Enzyme from Desulfovibrio Gigas Nat.Struct.Biol. 2000 7 1041 0 1C0P 11070076 D-AMINO ACIC OXIDASE IN COMPLEX WITH D-ALANINE AND A PARTIALLY OCCUPIED BIATOMIC SPECIES 1999-07-19 2000-11-22 Umhau, S.,Pollegioni, L.,Molla, G.,Diederichs, K.,Welte, W.,Pilone, M.S.,Ghisla, S. The x-ray structure of D-amino acid oxidase at very high resolution identifies the chemical mechanism of flavin-dependent substrate dehydrogenation. Proc.Natl.Acad.Sci.USA 2000 97 12463 12468 1EO5 10869182 Bacillus circulans strain 251 cyclodextrin glycosyltransferase in complex with maltoheptaose 2000-03-22 2000-11-22 Uitdehaag, J.C.,van Alebeek, G.J.,van Der Veen, B.A.,Dijkhuizen, L.,Dijkstra, B.W. Structures of maltohexaose and maltoheptaose bound at the donor sites of cyclodextrin glycosyltransferase give insight into the mechanisms of transglycosylation activity and cyclodextrin size specificity. Biochemistry 2000 39 7772 7780 1E3A 10993730 A slow processing precursor penicillin acylase from Escherichia coli 2000-06-07 2000-11-29 Hewitt, L.,Kasche, V.,Lummer, K.,Lewis, R.J.,Murshudov, G.N.,Verma, C.S.,Dodson, G.G.,Wilson, K.S. Structure of a Slow Processing Precursor Penicillin Acylase from Escherichia Coli Reveals the Linker Peptide Blocking the Active-Site Cleft J.Mol.Biol. 2000 302 887 0 1DJE 10642176 CRYSTAL STRUCTURE OF THE PLP-BOUND FORM OF 8-AMINO-7-OXONANOATE SYNTHASE 1999-12-02 2000-12-04 Webster, S.P.,Alexeev, D.,Campopiano, D.J.,Watt, R.M.,Alexeeva, M.,Sawyer, L.,Baxter, R.L. Mechanism of 8-amino-7-oxononanoate synthase: spectroscopic, kinetic, and crystallographic studies. Biochemistry 2000 39 516 528 1E2S 11124905 Crystal structure of an Arylsulfatase A mutant C69A 2000-05-24 2000-12-06 von Bulow, R.,Schmidt, B.,Dierks, T.,von Figura, K.,Uson, I. Crystal structure of an enzyme-substrate complex provides insight into the interaction between human arylsulfatase A and its substrates during catalysis. J. Mol. Biol. 2001 305 269 277 1FR3 11080635 THE HIGH RESOLUTION STRUCTURE OF A MOLYBDATE BINDING PROTEIN FROM SPOROMUSA OVATA 2000-09-07 2000-12-06 Wagner, U.G.,Stupperich, E.,Kratky, C. Structure of the molybdate/tungstate binding protein mop from Sporomusa ovata. Structure Fold.Des. 2000 8 1127 1136 1DWO 11173464 Crystal Structure of Hydroxynitrile Lyase from Manihot esculenta in Complex with Substrates Acetone and Chloroacetone:Implications for the Mechanism of Cyanogenesis 1999-12-10 2000-12-07 Lauble, H.,Forster, S.,Miehlich, B.,Wajant, H.,Effenberger, F. Structure of Hydroxynitrile Lyase from Manihot Esculenta in Complex with Substrates Acetone and Chloroacetone: Implications for the Mechanism of Cyanogenesis Acta Crystallogr.,Sect.D 2001 57 194 0 1DWP 11173464 Crystal Structure of Hydroxynitrile Lyase from Manihot esculenta at 2.2 Angstrom Resolution 1999-12-10 2000-12-07 Lauble, H.,Forster, S.,Miehlich, B.,Wajant, H.,Effenberger, F. Structure of Hydroxynitrile Lyase from Manihot Esculenta in Complex with Substrates Acetone and Chloroacetone: Implications for the Mechanism of Cyanogenesis Acta Crystallogr.,Sect.D 2001 57 194 0 1DWQ 11173464 Crystal Structure of Hydroxynitrile Lyase from Manihot esculenta in Complex with Substrates Acetone and Chloroacetone:Implications for the Mechanism of Cyanogenesis 1999-12-10 2000-12-07 Lauble, H.,Forster, S.,Miehlich, B.,Wajant, H.,Effenberger, F. Structure of Hydroxynitrile Lyase from Manihot Esculenta in Complex with Substrates Acetone and Chloroacetone: Implications for the Mechanism of Cyanogenesis Acta Crystallogr.,Sect.D 2001 57 194 0 1HFK 11223513 Asparaginase from Erwinia chrysanthemi, hexagonal form with weak sulfate 2000-12-05 2000-12-07 Jaskolski, M.,Kozak, M.,Lubkowski, J.,Palm, G.J.,Wlodawer, A. Structures of Two Highly Homologous Bacterial L-Asparaginases: A Case of Enantiomorphic Space Groups Acta Crystallogr.,Sect.D 2001 57 369 0 1DXP 10702283 Inhibition of the Hepatitis C Virus NS3/4A Protease. The Crystal Structures of Two Protease-Inhibitor Complexes (apo structure) 2000-01-13 2001-01-12 Di Marco, S.,Rizzi, M.,Volpari, C.,Walsh, M.,Narjes, F.,Colarusso, S.,De Francesco, R.,Matassa, V.G.,Sollazzo, M. Inhibition of the Hepatitis C Virus Ns3/4A Protease the Crystal Structures of Two Protease-Inhibitor Complexes J.Biol.Chem. 2000 275 7152 0 1HH9 10990450 ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH A PEPTIDE 2000-12-21 2001-01-12 Hoffmuller, U.,Knaute, T.,Hahn, M.,Hohne, W.,Schneider-Mergener, J.,Kramer, A. Evolutionary Transition Pathways for Changing Peptide Ligand Specificity and Structure Embo J. 2000 19 4866 0 1E8M 11031266 PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN, MUTANT, COMPLEXED WITH INHIBITOR 2000-09-27 2001-01-16 Fulop, V.,Szeltner, Z.,Renner, V.,Polgar, L. Structures of Prolyl Oligopeptidase Substrate/ Inhibitor Complexes. Use of Inhibitor Binding for Titration of the Catalytic Histidine Residue J.Biol.Chem. 2001 276 1262 0 1E8N 11031266 PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN, MUTANT, COMPLEXED WITH PEPTIDE 2000-09-27 2001-01-16 Fulop, V.,Szeltner, Z.,Renner, V.,Polgar, L. Structures of Prolyl Oligopeptidase Substrate/ Inhibitor Complexes. Use of Inhibitor Binding for Titration of the Catalytic Histidine Residue J.Biol.Chem. 2001 276 1262 0 1E7B 10940303 Crystal structure of human serum albumin complexed with the general anesthetic halothane 2000-08-26 2001-01-17 Bhattacharya, A.A.,Curry, S.,Franks, N.P. Binding of the General Anesthetics Propofol and Halothane to Human Serum Albumin. High Resolution Crystal Structures J.Biol.Chem. 2000 275 38731 0 1EP1 11188687 CRYSTAL STRUCTURE OF LACTOCOCCUS LACTIS DIHYDROOROTATE DEHYDROGENASE B 2000-03-27 2001-01-17 Rowland, P.,Norager, S.,Jensen, K.F.,Larsen, S. Structure of dihydroorotate dehydrogenase B: electron transfer between two flavin groups bridged by an iron-sulphur cluster. Structure Fold.Des. 2000 8 1227 1238 1HH6 10990450 ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH A PEPTIDE 2000-12-21 2001-01-26 Hoffmuller, U.,Knaute, T.,Hahn, M.,Hohne, W.,Schneider-Mergener, J.,Kramer, A. Evolutionary Transition Pathways for Changing Peptide Ligand Specificity and Structure Embo J. 2000 19 4866 0 1H81 11258887 STRUCTURE OF POLYAMINE OXIDASE IN THE REDUCED STATE 2001-01-24 2001-01-31 Binda, C.,Angelini, R.,Federico, R.,Ascenzi, P.,Mattevi, A. Structural Bases for Inhibitor Binding and Catalysis in Polyamine Oxidase Biochemistry 2001 40 2766 0 1HI6 ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH A PEPTIDE 2001-01-02 2001-02-08 Keitel, T.,Kramer, A.,Wessner, H.,Scholz, C.,Schneider-Mergener, J.,Hohne, W. Crystallographic Analysis of Anti-P24 (HIV-1) Monoclonal Antibody Cross-Reactivity and Polyspecificity Cell(Cambridge,Mass.) 1997 91 811 0 1FE1 11217865 CRYSTAL STRUCTURE PHOTOSYSTEM II 2000-07-20 2001-02-14 Zouni, A.,Witt, H.T.,Kern, J.,Fromme, P.,Krauss, N.,Saenger, W.,Orth, P. Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution. Nature 2001 409 739 743 1G8Y 11178907 CRYSTAL STRUCTURE OF THE HEXAMERIC REPLICATIVE HELICASE REPA OF PLASMID RSF1010 2000-11-21 2001-02-14 Niedenzu, T.,Roleke, D.,Bains, G.,Scherzinger, E.,Saenger, W. Crystal structure of the hexameric replicative helicase RepA of plasmid RSF1010. J.Mol.Biol. 2001 306 479 487 1I0H 11294629 CRYSTAL STRUCTURE OF THE E. COLI MANGANESE SUPEROXIDE DISMUTASE MUTANT Y174F AT 1.35 ANGSTROMS RESOLUTION. 2001-01-29 2001-02-28 Edwards, R.A.,Whittaker, M.M.,Whittaker, J.W.,Baker, E.N.,Jameson, G.B. Removing a hydrogen bond in the dimer interface of Escherichia coli manganese superoxide dismutase alters structure and reactivity. Biochemistry 2001 40 4622 4632 1EJB 10860731 LUMAZINE SYNTHASE FROM SACCHAROMYCES CEREVISIAE 2000-03-02 2001-03-02 Meining, W.,Mortl, S.,Fischer, M.,Cushman, M.,Bacher, A.,Ladenstein, R. The atomic structure of pentameric lumazine synthase from Saccharomyces cerevisiae at 1.85 A resolution reveals the binding mode of a phosphonate intermediate analogue. J.Mol.Biol. 2000 299 181 197 1E3C 11124905 Crystal structure of an Arylsulfatase A mutant C69S soaked in synthetic substrate 2000-06-13 2001-03-05 von Bulow, R.,Schmidt, B.,Dierks, T.,von Figura, K.,Uson, I. Crystal structure of an enzyme-substrate complex provides insight into the interaction between human arylsulfatase A and its substrates during catalysis. J. Mol. Biol. 2001 305 269 277 1HO3 11223513 CRYSTAL STRUCTURE ANALYSIS OF E. COLI L-ASPARAGINASE II (Y25F MUTANT) 2000-12-08 2001-03-07 Jaskolski, M.,Kozak, M.,Lubkowski, J.,Palm, G.,Wlodawer, A. Structures of two highly homologous bacterial L-asparaginases: a case of enantiomorphic space groups. Acta Crystallogr.,Sect.D 2001 57 369 377 1I3F 11513591 Ribonuclease T1 V89S mutant 2001-02-15 2001-03-07 De Vos, S.,Backmann, J.,Prevost, M.,Steyaert, J.,Loris, R. Hydrophobic core manipulations in ribonuclease T1 Biochemistry 2001 40 10140 10149 1I3I 11513591 Ribonuclease T1 V78T mutant 2001-02-15 2001-03-07 De Vos, S.,Backmann, J.,Prevost, M.,Steyaert, J.,Loris, R. Hydrophobic core manipulations in ribonuclease T1 Biochemistry 2001 40 10140 10149 1H9G 11296236 FadR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI, in complex with myristoyl-CoA 2001-03-09 2001-03-09 Van Aalten, D.M.F.,Dirusso, C.C.,Knudsen, J. The Structural Basis of Acyl Coenzyme A-Dependent Regulation of the Transcription Factor Fadr Embo J. 2001 20 2041 0 1HQJ 11206050 CRYSTAL STRUCTURE OF A DE NOVO DESIGNED TRIMERIC COILED-COIL PEPTIDE 2000-12-18 2001-03-14 Burkhard, P.,Meier, M.,Lustig, A. Design of a minimal protein oligomerization domain by a structural approach. Protein Sci. 2000 9 2294 2301 1I7O CRYSTAL STRUCTURE OF HPCE 2001-03-10 2001-03-28 Tame, J.R.H.,Namba, K.,Dodson, E.J.,Roper, D.I. The crystal structure of HpcE, a multi-functional enzyme fold To be Published 0 0 0 0 1HE7 11263982 Human Nerve growth factor receptor TrkA 2000-11-20 2001-04-02 Robertson, A.G.S.,Banfield, M.J.,Allen, S.J.,Dando, J.A.,Mason, G.G.F.,Tyler, S.J.,Bennett, G.S.,Brain, S.D.,Clarke, A.R.,Naylor, R.L.,Wilcock, G.K.,Brady, R.L.,Dawbarn, D. Identification and Structure of the Nerve Growth Factor Binding Site on Trka. Biochem.Biophys.Res.Commun. 2001 282 131 0 1E8T 11062565 Structure of the multifunctional paramyxovirus hemagglutinin-neuraminidase 2000-10-01 2001-04-03 Crennell, S.,Takimoto, T.,Portner, A.,Taylor, G. Crystal Structure of the Multifunctional Paramyxovirus Hemagglutinin-Neuraminidase Nat.Struct.Biol. 2000 7 1068 0 1E8U 11062565 Structure of the multifunctional paramyxovirus hemagglutinin-neuraminidase 2000-10-01 2001-04-03 Crennell, S.,Takimoto, T.,Portner, A.,Taylor, G. Crystal Structure of the Multifunctional Paramyxovirus Hemagglutinin-Neuraminidase Nat.Struct.Biol. 2000 7 1068 0 1E8V 11062565 Structure of the multifunctional paramyxovirus hemagglutinin-neuraminidase 2000-10-01 2001-04-03 Crennell, S.,Takimoto, T.,Portner, A.,Taylor, G. Crystal Structure of the Multifunctional Paramyxovirus Hemagglutinin-Neuraminidase Nat.Struct.Biol. 2000 7 1068 0 1ESW 11082203 X-RAY STRUCTURE OF ACARBOSE BOUND TO AMYLOMALTASE FROM THERMUS AQUATICUS. IMPLICATIONS FOR THE SYNTHESIS OF LARGE CYCLIC GLUCANS 2000-04-11 2001-04-11 Przylas, I.,Terada, Y.,Fujii, K.,Takaha, T.,Saenger, W.,Strater, N. X-ray structure of acarbose bound to amylomaltase from Thermus aquaticus. Implications for the synthesis of large cyclic glucans. Eur.J.Biochem. 2000 267 6903 6913 1IC6 11258922 STRUCTURE OF A SERINE PROTEASE PROTEINASE K FROM TRITIRACHIUM ALBUM LIMBER AT 0.98 A RESOLUTION 2001-03-30 2001-04-11 Betzel, C.,Gourinath, S.,Kumar, P.,Kaur, P.,Perbandt, M.,Eschenburg, S.,Singh, T.P. Structure of a serine protease proteinase K from Tritirachium album limber at 0.98 A resolution. Biochemistry 2001 40 3080 3088 1QHD 11285213 CRYSTAL STRUCTURE OF VP6, THE MAJOR CAPSID PROTEIN OF GROUP A ROTAVIRUS 1999-04-29 2001-04-13 Mathieu, M.,Petitpas, I.,Navaza, J.,Lepault, J.,Kohli, E.,Pothier, P.,Prasad, B.V.,Cohen, J.,Rey, F.A. Atomic structure of the major capsid protein of rotavirus: implications for the architecture of the virion. EMBO J. 2001 20 1485 1497 1FST 11320308 CRYSTAL STRUCTURE OF TRUNCATED HUMAN RHOGDI TRIPLE MUTANT 2000-09-11 2001-05-02 Longenecker, K.L.,Garrard, S.M.,Sheffield, P.J.,Derewenda, Z.S. Protein crystallization by rational mutagenesis of surface residues: Lys to Ala mutations promote crystallization of RhoGDI. Acta Crystallogr.,Sect.D 2001 57 679 688 1FT0 11320308 CRYSTAL STRUCTURE OF TRUNCATED HUMAN RHOGDI K113A MUTANT 2000-09-11 2001-05-02 Longenecker, K.L.,Garrard, S.M.,Sheffield, P.J.,Derewenda, Z.S. Protein crystallization by rational mutagenesis of surface residues: Lys to Ala mutations promote crystallization of RhoGDI. Acta Crystallogr.,Sect.D 2001 57 679 688 1FT3 11320308 CRYSTAL STRUCTURE OF TRUNCATED RHOGDI K141A MUTANT 2000-09-11 2001-05-02 Longenecker, K.L.,Garrard, S.M.,Sheffield, P.J.,Derewenda, Z.S. Protein crystallization by rational mutagenesis of surface residues: Lys to Ala mutations promote crystallization of RhoGDI. Acta Crystallogr.,Sect.D 2001 57 679 688 1G6X 11320305 ULTRA HIGH RESOLUTION STRUCTURE OF BOVINE PANCREATIC TRYPSIN INHIBITOR (BPTI) MUTANT WITH ALTERED BINDING LOOP SEQUENCE 2000-11-08 2001-05-09 Addlagatta, A.,Krzywda, S.,Czapinska, H.,Otlewski, J.,Jaskolski, M. Ultrahigh-resolution structure of a BPTI mutant. Acta Crystallogr.,Sect.D 2001 57 649 663 1IBD 11327787 X-RAY 3D STRUCTURE OF P.LEIOGNATHI CU,ZN SOD MUTANT V29A 2001-03-28 2001-05-09 Stroppolo, M.E.,Pesce, A.,D'Orazio, M.,O'Neill, P.,Bordo, D.,Rosano, C.,Milani, M.,Battistoni, A.,Bolognesi, M.,Desideri, A. Single mutations at the subunit interface modulate copper reactivity in Photobacterium leiognathi Cu,Zn superoxide dismutase. J.Mol.Biol. 2001 308 555 563 1IBF 11327787 X-RAY 3D STRUCTURE OF P.LEIOGNATHI CU,ZN SOD MUTANT V29G 2001-03-28 2001-05-09 Stroppolo, M.E.,Pesce, A.,D'Orazio, M.,O'Neill, P.,Bordo, D.,Rosano, C.,Milani, M.,Battistoni, A.,Bolognesi, M.,Desideri, A. Single mutations at the subunit interface modulate copper reactivity in Photobacterium leiognathi Cu,Zn superoxide dismutase. J.Mol.Biol. 2001 308 555 563 1IBH 11327787 X-RAY 3D STRUCTURE OF P.LEIOGNATHI CU,ZN SOD MUTANT M41I 2001-03-28 2001-05-09 Stroppolo, M.E.,Pesce, A.,D'Orazio, M.,O'Neill, P.,Bordo, D.,Rosano, C.,Milani, M.,Battistoni, A.,Bolognesi, M.,Desideri, A. Single mutations at the subunit interface modulate copper reactivity in Photobacterium leiognathi Cu,Zn superoxide dismutase. J.Mol.Biol. 2001 308 555 563 1E1Z 11124905 Crystal structure of an Arylsulfatase A mutant C69S 2000-05-12 2001-05-10 von Bulow, R.,Schmidt, B.,Dierks, T.,von Figura, K.,Uson, I. Crystal structure of an enzyme-substrate complex provides insight into the interaction between human arylsulfatase A and its substrates during catalysis. J. Mol. Biol. 2001 305 269 277 1EGN 11336632 CELLOBIOHYDROLASE CEL7A (E223S, A224H, L225V, T226A, D262G) MUTANT 2000-02-16 2001-05-16 Becker, D.,Braet, C.,Brumer III, H.,Claeyssens, M.,Divne, C.,Fagerstrom, B.R.,Harris, M.,Jones, T.A.,Kleywegt, G.J.,Koivula, A.,Mahdi, S.,Piens, K.,Sinnott, M.L.,Stahlberg, J.,Teeri, T.T.,Underwood, M.,Wohlfahrt, G. Engineering of a glycosidase Family 7 cellobiohydrolase to more alkaline pH optimum: the pH behaviour of Trichoderma reesei Cel7A and its E223S/ A224H/L225V/T226A/D262G mutant. Biochem.J. 2001 356 19 30 1EZV 10873857 STRUCTURE OF THE YEAST CYTOCHROME BC1 COMPLEX CO-CRYSTALLIZED WITH AN ANTIBODY FV-FRAGMENT 2000-05-12 2001-05-16 Hunte, C.,Koepke, J.,Lange, C.,Rossmanith, T.,Michel, H. Structure at 2.3 A resolution of the cytochrome bc(1) complex from the yeast Saccharomyces cerevisiae co-crystallized with an antibody Fv fragment. Structure Fold.Des. 2000 8 669 684 1I1D 11278591 CRYSTAL STRUCTURE OF YEAST GNA1 BOUND TO COA AND GLNAC-6P 2001-02-01 2001-05-16 Peneff, C.,Mengin-Lecreulx, D.,Bourne, Y. The crystal structures of Apo and complexed Saccharomyces cerevisiae GNA1 shed light on the catalytic mechanism of an amino-sugar N-acetyltransferase. J.Biol.Chem. 2001 276 16328 16334 1I9B 11357122 X-RAY STRUCTURE OF ACETYLCHOLINE BINDING PROTEIN (ACHBP) 2001-03-18 2001-05-16 Brejc, K.,van Dijk, W.J.,Klaassen, R.V.,Schuurmans, M.,van Der Oost, J.,Smit, A.B.,Sixma, T.K. Crystal structure of an ACh-binding protein reveals the ligand-binding domain of nicotinic receptors. Nature 2001 411 269 276 1E2Q 10873853 Human thymidylate kinase complexed with TP5A and a magnesium-ion 2000-05-23 2001-05-17 Ostermann, N.,Schlichting, I.,Brundiers, R.,Konrad, M.,Reinstein, J.,Veit, T.,Goody, R.S.,Lavie, A. Insights Into the Phosphoryltransfer Mechanism of Human Thymidylate Kinase Gained from Crystal Structures of Enzyme Complexes Along the Reaction Coordinate Structure 2000 8 629 0 1E33 11777924 Crystal structure of an Arylsulfatase A mutant P426L 2000-06-06 2001-05-25 von Bulow, R.,Schmidt, B.,Dierks, T.,Schwabauer, N.,Schilling, K.,Weber, E.,Uson, I.,von Figura, K. Defective oligomerization of arylsulfatase a as a cause of its instability in lysosomes and metachromatic leukodystrophy. J. Biol. Chem. 2002 277 9455 9461 1E3W 11023795 Rat brain 3-hydroxyacyl-CoA dehydrogenase binary complex with NADH and 3-keto butyrate 2000-06-26 2001-05-25 Powell, A.J.,Read, J.A.,Banfield, M.J.,Gunn-Moore, F.,Yan, S.D.,Lustbader, J.,Stern, A.R.,Stern, D.M.,Brady, R.L. Recognition of Structurally Diverse Substrates by Type II 3-Hydroxyacyl-Coa Dehydrogenase (Hadh II) Amyloid-Beta Binding Alcohol Dehydrogenase (Abad) J.Mol.Biol. 2000 303 311 0 1E32 11163219 Structure of the N-Terminal domain and the D1 AAA domain of membrane fusion ATPase p97 2000-06-05 2001-05-31 Zhang, X.,Shaw, A.,Bates, P.A.,Newman, R.H.,Gowen, B.,Orlova, E.,Gorman, M.A.,Kondo, H.,Dokurno, P.,Lally, J.,Leonard, G.,Meyer, H.,Van Heel, M.,Freemont, P.S. Structure of the Aaa ATPase P97 Mol.Cell 2000 6 1473 0 1HXT 11371193 OMPF PORIN MUTANT NQAAA 2001-01-17 2001-06-06 Phale, P.S.,Philippsen, A.,Widmer, C.,Phale, V.P.,Rosenbusch, J.P.,Schirmer, T. Role of charged residues at the OmpF porin channel constriction probed by mutagenesis and simulation. Biochemistry 2001 40 6319 6325 1HXX 11371193 OMPF PORIN MUTANT Y106F 2001-01-17 2001-06-06 Phale, P.S.,Philippsen, A.,Widmer, C.,Phale, V.P.,Rosenbusch, J.P.,Schirmer, T. Role of charged residues at the OmpF porin channel constriction probed by mutagenesis and simulation. Biochemistry 2001 40 6319 6325 1H9Z 11285262 Human Serum Albumin Complexed With Myristic Acid and the R-(+) enantiomer of warfarin 2001-03-23 2001-06-20 Petitpas, I.,Bhattacharya, A.A.,Twine, S.,East, M.,Curry, S. Crystal Structure Analysis of Warfarin Binding to Human Serum Albumin: Anatomy of Drug Site I J.Biol.Chem. 2001 276 22804 0 1HA2 11285262 Human Serum Albumin Complexed With Myristic Acid and the S-(-) enantiomer of warfarin 2001-03-23 2001-06-20 Petitpas, I.,Bhattacharya, A.A.,Twine, S.,East, M.,Curry, S. Crystal Structure Analysis of Warfarin Binding to Human Serum Albumin: Anatomy of Drug Site I J.Biol.Chem. 2001 276 22804 0 1HNO 11399063 CRYSTAL STRUCTURE OF PEROXISOMAL DELTA3-DELTA2-ENOYL-COA ISOMERASE FROM SACCHAROMYCES CEREVISIAE 2000-12-08 2001-06-20 Mursula, A.M.,van Aalten, D.M.,Hiltunen, J.K.,Wierenga, R.K. The crystal structure of delta(3)-delta(2)-enoyl-CoA isomerase. J.Mol.Biol. 2001 309 845 853 1E3X 10924103 Native structure of chimaeric amylase from B. amyloliquefaciens and B. licheniformis at 1.92A 2000-06-26 2001-06-21 Brzozowski, A.M.,Lawson, D.M.,Turkenburg, J.P.,Bisgaard-Frantzen, H.,Svendsen, A.,Borchert, T.V.,Dauter, Z.,Wilson, K.S.,Davies, G.J. Structural Analysis of a Chimeric Bacterial Alpha-Amylase. High Resolution Analysis of Native and Ligand Complexes Biochemistry 2000 39 9099 0 1E3Z 10924103 Acarbose complex of chimaeric amylase from B. amyloliquefaciens and B. licheniformis at 1.93A 2000-06-27 2001-06-21 Brzozowski, A.M.,Lawson, D.M.,Turkenburg, J.P.,Bisgaard-Frantzen, H.,Svendsen, A.,Borchert, T.V.,Dauter, Z.,Wilson, K.S.,Davies, G.J. Structural Analysis of a Chimeric Bacterial Alpha-Amylase. High Resolution Analysis of Native and Ligand Complexes Biochemistry 2000 39 9099 0 1E6R 11481469 Chitinase B from Serratia marcescens wildtype in complex with inhibitor allosamidin 2000-08-22 2001-06-22 Van Aalten, D.M.F.,Komander, D.,Synstad, B.,Gseidnes, S.,Peter, M.G.,Eijsink, V.G.H. Structural Insights Into the Catalytic Mechanism of a Family 18 Exo-Chitinase Proc.Natl.Acad.Sci.USA 2001 98 8979 0 1F86 11243784 TRANSTHYRETIN THR119MET PROTEIN STABILISATION 2000-06-29 2001-06-29 Sebastiao, M.P.,Lamzin, V.,Saraiva, M.J.,Damas, A.M. Transthyretin stability as a key factor in amyloidogenesis: X-ray analysis at atomic resolution. J.Mol.Biol. 2001 306 733 744 1ILX 11459991 Excited State Dynamics in Photosystem II Revised. New Insights from the X-ray Structure. 2001-05-09 2001-07-18 Vasil'ev, S.,Orth, P.,Zouni, A.,Owens, T.G.,Bruce, D. Excited-state dynamics in photosystem II: insights from the x-ray crystal structure. Proc.Natl.Acad.Sci.USA 2001 98 8602 8607 1FB2 11717491 STRUCTURE OF PHOSPHOLIPASE A2 FROM DABOIA RUSSELLI PULCHELLA AT 1.95 2000-07-14 2001-07-25 Chandra, V.,Kaur, P.,Jasti, J.,Betzel, C.,Singh, T.P. Regulation of catalytic function by molecular association: structure of phospholipase A2 from Daboia russelli pulchella (DPLA2) at 1.9 A resolution. Acta Crystallogr.,Sect.D 2001 57 1793 1798 1FHN 11243784 TRANSTHYRETIN STABILITY AS A KEY FACTOR IN AMYLOIDOGENESIS 2000-08-02 2001-07-25 Sebastiao, M.P.,Lamzin, V.,Saraiva, M.J.,Damas, A.M. Transthyretin stability as a key factor in amyloidogenesis: X-ray analysis at atomic resolution. J.Mol.Biol. 2001 306 733 744 1I6U 11478863 RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII 2001-03-05 2001-08-03 Tishchenko, S.,Nikulin, A.,Fomenkova, N.,Nevskaya, N.,Nikonov, O.,Dumas, P.,Moine, H.,Ehresmann, B.,Ehresmann, C.,Piendl, W.,Lamzin, V.,Garber, M.,Nikonov, S. Detailed analysis of RNA-protein interactions within the ribosomal protein S8-rRNA complex from the archaeon Methanococcus jannaschii. J.Mol.Biol. 2001 311 311 324 1IEE 11468395 STRUCTURE OF TETRAGONAL HEN EGG WHITE LYSOZYME AT 0.94 A FROM CRYSTALS GROWN BY THE COUNTER-DIFFUSION METHOD 2001-04-09 2001-08-08 Sauter, C.,Otalora, F.,Gavira, J.A.,Vidal, O.,Giege, R.,Garcia-Ruiz, J.M. Structure of tetragonal hen egg-white lysozyme at 0.94 A from crystals grown by the counter-diffusion method. Acta Crystallogr.,Sect.D 2001 57 1119 1126 1JC7 11473262 The Laminin-Binding Domain of Agrin is Structurally Related to N-TIMP-1 2001-06-08 2001-08-08 Stetefeld, J.,Jenny, M.,Schulthess, T.,Landwehr, R.,Schumacher, B.,Frank, S.,Ruegg, M.A.,Engel, J.,Kammerer, R.A. The laminin-binding domain of agrin is structurally related to N-TIMP-1. Nat.Struct.Biol. 2001 8 705 709 1E6F 12499540 Human MIR-receptor, repeat 11 2000-08-15 2001-08-09 Uson, I.,Schmidt, B.,Von Buelow, R.,Grimme, S.,Von Figura, K.,Dauter, M.,Rajashankar, K.R.,Dauter, Z.,Sheldrick, G.M. Locating the Anomalous Scatterer Substructures in Halide and Sulfur Phasing Acta Crystallogr.,Sect.D 2003 59 57 0 1E89 11316882 ON THE MECHANISM OF CYANOGENESIS CATALYZED BY HYDROXYNITRILE LYASE FROM MANIHOT ESCULENTA. CRYSTAL STRUCTURE OF ACTIVE SITE MUTANT SER80ALA IN COMPLEX WITH ACETONE CYANOHYDRIN 2000-09-18 2001-08-17 Lauble, H.,Miehlich, B.,Foerster, S.,Wajant, H.,Effenberger, F. Mechanistic Aspects of Cyanogenesis from Active-Site Mutant Ser80Ala of Hydroxynitrile Lyase from Manihot Esculenta in Complex with Acetone Cyanohydrin Protein Sci. 2001 10 1015 0 1E8D 11316882 MECHANISTIC ASPECTS OF CYANOGENESIS FROM ACTIVE SITE MUTANT SER80ALA OF HYDROXYNITRILE LYASE FROM MANIHOT ESCULENTA IN COMPLEX WITH ACETONE CYANOHYDRIN 2000-09-19 2001-08-17 Lauble, H.,Miehlich, B.,Forster, S.,Wajant, H.,Effenberger, F. Mechanistic Aspects of Cyanogenesis from Active-Site Mutant Ser80Ala of Hydroxynitrile Lyase from Manihot Esculenta in Complex with Acetone Cyanohydrin. Protein Sci. 2001 10 1015 0 1FNY 11484224 LEGUME LECTIN OF THE BARK OF ROBINIA PSEUDOACACIA. 2000-08-24 2001-08-24 Rabijns, A.,Verboven, C.,Rouge, P.,Barre, A.,Van Damme, E.J.,Peumans, W.J.,De Ranter, C.J. Structure of a legume lectin from the bark of Robinia pseudoacacia and its complex with N-acetylgalactosamine. Proteins 2001 44 470 478 1J75 11524677 Crystal Structure of the DNA-Binding Domain Zalpha of DLM-1 Bound to Z-DNA 2001-05-15 2001-09-01 Schwartz, T.,Behlke, J.,Lowenhaupt, K.,Heinemann, U.,Rich, A. Structure of the DLM-1-Z-DNA complex reveals a conserved family of Z-DNA-binding proteins. Nat.Struct.Biol. 2001 8 761 765 1FX0 11032839 Crystal structure of the chloroplast F1-ATPase from spinach 2000-09-25 2001-09-25 Groth, G.,Pohl, E. The structure of the chloroplast F1-ATPase at 3.2 A resolution. J.Biol.Chem. 2001 276 1345 1352 1IL2 11566892 Crystal Structure of the E. coli Aspartyl-tRNA Synthetase:Yeast tRNAasp:aspartyl-Adenylate Complex 2001-05-07 2001-09-28 Moulinier, L.,Eiler, S.,Eriani, G.,Gangloff, J.,Thierry, J.C.,Gabriel, K.,McClain, W.H.,Moras, D. The structure of an AspRS-tRNA(Asp) complex reveals a tRNA-dependent control mechanism. EMBO J. 2001 20 5290 5301 1E9A 11071809 Human thymidylate kinase complexed with the bisubstrate inhibitor AZTP5A 2000-10-10 2001-10-05 Ostermann, N.,Lavie, A.,Padiyar, S.,Brundiers, R.,Veit, T.,Reintein, J.,Goody, R.S.,Konrad, M.,Schlichting, I. Potentiating Azt Activation: Structures of Wildtype and Mutant Human Thymidylate Kinase Suggest Reasons for the Mutants' Improved Kinetics with the HIV Prodrug Metabolite Aztmp J.Mol.Biol. 2000 304 43 0 1E9B 11071809 Human thymidylate kinase complexed with AZTMP and APPNP 2000-10-10 2001-10-05 Ostermann, N.,Lavie, A.,Padiyar, S.,Brundiers, R.,Veit, T.,Reintein, J.,Goody, R.S.,Konrad, M.,Schlichting, I. Potentiating Azt Activation: Structures of Wildtype and Mutant Human Thymidylate Kinase Suggest Reasons for the Mutants' Improved Kinetics with the HIV Prodrug Metabolite Aztmp J.Mol.Biol. 2000 304 43 0 1G1C 11525170 I1 DOMAIN FROM TITIN 2000-10-11 2001-10-12 Mayans, O.,Wuerges, J.,Canela, S.,Gautel, M.,Wilmanns, M. Structural evidence for a possible role of reversible disulphide bridge formation in the elasticity of the muscle protein titin. Structure 2001 9 331 340 1JTG 11573088 CRYSTAL STRUCTURE OF TEM-1 BETA-LACTAMASE / BETA-LACTAMASE INHIBITOR PROTEIN COMPLEX 2001-08-20 2001-10-17 Lim, D.,Park, H.U.,De Castro, L.,Kang, S.G.,Lee, H.S.,Jensen, S.,Lee, K.J.,Strynadka, N.C. Crystal structure and kinetic analysis of beta-lactamase inhibitor protein-II in complex with TEM-1 beta-lactamase. Nat.Struct.Biol. 2001 8 848 852 1HCU 11545593 alpha-1,2-mannosidase from Trichoderma reesei 2001-05-09 2001-10-18 Van Petegem, F.,Contreras, H.,Contreras, R.,Van Beeumen, J. Trichoderma Reesei Alpha-1,2-Mannosidase: Structural Basis for the Cleavage of Four Consecutive Mannose Residues J.Mol.Biol. 2001 312 157 0 1JLT 11679719 Vipoxin Complex 2001-07-16 2001-10-31 Banumathi, S.,Rajashankar, K.R.,Notzel, C.,Aleksiev, B.,Singh, T.P.,Genov, N.,Betzel, C. Structure of the neurotoxic complex vipoxin at 1.4 A resolution. Acta Crystallogr.,Sect.D 2001 57 1552 1559 1HDH 11435113 Arylsulfatase from Pseudomonas aeruginosa 2000-11-16 2001-11-15 Boltes, I.,Czapinska, H.,Kahnert, A.,von Buelow, R.,Dirks, T.,Schmidt, B.,von Figura, K.,Kertesz, M.A.,Uson, I. 1.3 A Structure of Arylsulfatase from Pseudomonas Aeruginosa Establishes the Catalytic Mechanism of Sulfate Ester Cleavage in the Sulfatase Family. Structure 2001 9 483 491 1GA5 11669620 CRYSTAL STRUCTURE OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB(ALPHA) DNA-BINDING DOMAIN BOUND TO ITS COGNATE RESPONSE ELEMENT 2000-11-29 2001-11-16 Sierk, M.L.,Zhao, Q.,Rastinejad, F. DNA Deformability as a Recognition Feature in the RevErb Response Element Biochemistry 2001 40 12833 12843 1JXA 11700065 GLUCOSAMINE 6-PHOSPHATE SYNTHASE WITH GLUCOSE 6-PHOSPHATE 2001-09-06 2001-11-21 Teplyakov, A.,Obmolova, G.,Badet, B.,Badet-Denisot, M.A. Channeling of ammonia in glucosamine-6-phosphate synthase. J.Mol.Biol. 2001 313 1093 1102 1GMX 11709175 Escherichia coli GlpE sulfurtransferase 2001-09-25 2001-11-28 Spallarossa, A.,Donahue, J.T.,Larson, T.J.,Bolognesi, M.,Bordo, D. Escherichia Coli Glpe is a Prototype Sulfurtransferase for the Single-Domain Rhodanese Homology Superfamily Structure 2001 9 1117 0 1K9S 11786017 PURINE NUCLEOSIDE PHOSPHORYLASE FROM E. COLI IN COMPLEX WITH FORMYCIN A DERIVATIVE AND PHOSPHATE 2001-10-30 2001-11-28 Koellner, G.,Bzowska, A.,Wielgus-Kutrowska, B.,Luic, M.,Steiner, T.,Saenger, W.,Stepinski, J. Open and closed conformation of the E. coli purine nucleoside phosphorylase active center and implications for the catalytic mechanism. J.Mol.Biol. 2002 315 351 371 1I40 11846572 STRUCTURE OF INORGANIC PYROPHOSPHATASE 2001-02-19 2001-12-05 Samygina, V.R.,Popov, A.N.,Rodina, E.V.,Vorobyeva, N.N.,Lamzin, V.S.,Polyakov, K.M.,Kurilova, S.A.,Nazarova, T.I.,Avaeva, S.M. The structures of Escherichia coli inorganic pyrophosphatase complexed with Ca(2+) or CaPP(i) at atomic resolution and their mechanistic implications. J.Mol.Biol. 2001 314 633 645 1I6T 11846572 STRUCTURE OF INORGANIC PYROPHOSPHATASE 2001-03-05 2001-12-05 Samygina, V.R.,Popov, A.N.,Rodina, E.V.,Vorobyeva, N.N.,Lamzin, V.S.,Polyakov, K.M.,Kurilova, S.A.,Nazarova, T.I.,Avaeva, S.M. The structures of Escherichia coli inorganic pyrophosphatase complexed with Ca(2+) or CaPP(i) at atomic resolution and their mechanistic implications. J.Mol.Biol. 2001 314 633 645 1CI9 11847270 DFP-INHIBITED ESTERASE ESTB FROM BURKHOLDERIA GLADIOLI 1999-04-08 2001-12-12 Wagner, U.G.,Petersen, E.I.,Schwab, H.,Kratky, C. EstB from Burkholderia gladioli: a novel esterase with a beta-lactamase fold reveals steric factors to discriminate between esterolytic and beta-lactam cleaving activity Protein Sci. 2002 11 467 478 1IRQ 11733997 Crystal structure of omega transcriptional repressor at 1.5A resolution 2001-10-11 2001-12-12 Murayama, K.,Orth, P.,de la Hoz, A.B.,Alonso, J.C.,Saenger, W. Crystal structure of omega transcriptional repressor encoded by Streptococcus pyogenes plasmid pSM19035 at 1.5 A resolution. J.Mol.Biol. 2001 314 789 796 1HQK 11237620 CRYSTAL STRUCTURE ANALYSIS OF LUMAZINE SYNTHASE FROM AQUIFEX AEOLICUS 2000-12-18 2001-12-18 Zhang, X.,Meining, W.,Fischer, M.,Bacher, A.,Ladenstein, R. X-ray structure analysis and crystallographic refinement of lumazine synthase from the hyperthermophile Aquifex aeolicus at 1.6 A resolution: determinants of thermostability revealed from structural comparisons. J.Mol.Biol. 2001 306 1099 1114 1KF2 11856829 Atomic Resolution Structure of RNase A at pH 5.2 2001-11-19 2001-12-19 Berisio, R.,Sica, F.,Lamzin, V.S.,Wilson, K.S.,Zagari, A.,Mazzarella, L. Atomic resolution structures of ribonuclease A at six pH values. Acta Crystallogr.,Sect.D 2002 58 441 450 1KF3 11856829 Atomic Resolution Structure of RNase A at pH 5.9 2001-11-19 2001-12-19 Berisio, R.,Sica, F.,Lamzin, V.S.,Wilson, K.S.,Zagari, A.,Mazzarella, L. Atomic resolution structures of ribonuclease A at six pH values. Acta Crystallogr.,Sect.D 2002 58 441 450 1KF4 11856829 Atomic Resolution Structure of RNase A at pH 6.3 2001-11-19 2001-12-19 Berisio, R.,Sica, F.,Lamzin, V.S.,Wilson, K.S.,Zagari, A.,Mazzarella, L. Atomic resolution structures of ribonuclease A at six pH values. Acta Crystallogr.,Sect.D 2002 58 441 450 1KF5 11856829 Atomic Resolution Structure of RNase A at pH 7.1 2001-11-19 2001-12-19 Berisio, R.,Sica, F.,Lamzin, V.S.,Wilson, K.S.,Zagari, A.,Mazzarella, L. Atomic resolution structures of ribonuclease A at six pH values. Acta Crystallogr.,Sect.D 2002 58 441 450 1KF7 11856829 Atomic Resolution Structure of RNase A at pH 8.0 2001-11-19 2001-12-19 Berisio, R.,Sica, F.,Lamzin, V.S.,Wilson, K.S.,Zagari, A.,Mazzarella, L. Atomic resolution structures of ribonuclease A at six pH values. Acta Crystallogr.,Sect.D 2002 58 441 450 1KF8 11856829 Atomic resolution structure of RNase A at pH 8.8 2001-11-19 2001-12-19 Berisio, R.,Sica, F.,Lamzin, V.S.,Wilson, K.S.,Zagari, A.,Mazzarella, L. Atomic resolution structures of ribonuclease A at six pH values. Acta Crystallogr.,Sect.D 2002 58 441 450 1KB0 11714714 Crystal Structure of Quinohemoprotein Alcohol Dehydrogenase from Comamonas testosteroni 2001-11-05 2001-12-28 Oubrie, A.,Rozeboom, H.J.,Kalk, K.H.,Huizinga, E.G.,Dijkstra, B.W. Crystal structure of quinohemoprotein alcohol dehydrogenase from Comamonas testosteroni: structural basis for substrate oxidation and electron transfer. J.Biol.Chem. 2002 277 3727 3732 1EB8 11742123 Structure Determinants of Substrate Specificity of Hydroxynitrile Lyase from Manihot esculenta 2001-07-24 2002-01-01 Lauble, H.,Miehlich, B.,Foerster, S.,Kobler, C.,Wajant, H.,Effenberger, F. Structure Determinants of Substrate Specificity of Hydroxynitrile Lyase from Manihot Esculenta. Protein Sci. 2002 11 65 0 1EB9 11742123 Structure Determinants of Substrate Specificity of Hydroxynitrile Lyase from Manihot esculenta 2001-07-24 2002-01-01 Lauble, H.,Miehlich, B.,Foerster, S.,Kobler, C.,Wajant, H.,Effenberger, F. Structure Determinants of Substrate Specificity of Hydroxynitrile Lyase from Manihot Esculenta. Protein Sci. 2002 11 65 0 1GNI 11743713 HUMAN SERUM ALBUMIN COMPLEXED WITH cis-9-OCTADECENOIC ACID (OLEIC ACID) 2001-10-05 2002-01-01 Petitpas, I.,Gruene, T.,Bhattacharya, A.A.,Curry, S. Crystal Structures of Human Serum Albumin Complexed with Monounsaturated and Polyunsaturated Fatty Acids. J.Mol.Biol. 2001 314 955 0 1GNJ 11743713 HUMAN SERUM ALBUMIN COMPLEXED WITH cis-5,8,11,14-EICOSATETRAENOIC ACID (ARACHIDONIC ACID) 2001-10-05 2002-01-01 Petitpas, I.,Gruene, T.,Bhattacharya, A.A.,Curry, S. Crystal Structures of Human Serum Albumin Complexed with Monounsaturated and Polyunsaturated Fatty Acids. J.Mol.Biol. 2001 314 955 0 1GPI 11743726 Cellobiohydrolase Cel7D (CBH 58) from Phanerochaete chrysosporium. Catalytic module at 1.32 Angstrom resolution 2001-11-05 2002-01-01 Munoz, I.G.,Ubhayasekera, W.,Henriksson, H.,Szabo, I.,Pettersson, G.,Johansson, G.,Mowbray, S.L.,Stahlberg, J. Family 7 Cellobiohydrolases from Phanerochaete Chrysosporium: Crystal Structure of the Catalytic Module of Cel7D (Cbh58) at 1.32 Angstrom Resolution and Homology Models of the Isozymes. J.Mol.Biol. 2001 314 1097 0 1GSM 11807247 A reassessment of the MAdCAM-1 structure and its role in integrin recognition. 2002-01-08 2002-01-29 Dando, J.,Wilkinson, K.W.,Ortlepp, S.,King, D.J.,Brady, R.L. A Reassessment of the Madcam-1 Structure and its Role in Integrin Recognition Acta Crystallogr.,Sect.D 2002 58 233 0 1H8G 11694890 C-terminal domain of the major autolysin (C-LytA) from Streptococcus pneumoniae 2001-02-06 2002-01-31 Fernandez-Tornero, C.,Lopez, R.,Garcia, E.,Gimenez-Gallego, G.,Romero, A. A Novel Solenoid Fold in the Cell Wall Anchoring Domain of the Pneumococcal Virulence Factor Lyta Nat.Struct.Biol. 2001 8 1020 0 1J78 11799400 Crystallographic analysis of the human vitamin D binding protein 2001-05-16 2002-02-06 Verboven, C.,Rabijns, A.,De Maeyer, M.,Van Baelen, H.,Bouillon, R.,De Ranter, C. A structural basis for the unique binding features of the human vitamin D-binding protein. Nat.Struct.Biol. 2002 9 131 136 1GPW 11839304 Structural evidence for ammonia tunneling across the (beta/alpha)8 barrel of the imidazole glycerol phosphate synthase bienzyme complex. 2001-11-12 2002-02-10 Douangamath, A.,Walker, M.,Beismann-Driemeyer, S.,Vega-Fernandez, M.C.,Sterner, R.,Wilmanns, M. Structural Evidence for Ammonia Tunneling Across the (Beta Alpha)(8) Barrel of the Imidazole Glycerol Phosphate Synthase Bienzyme Complex. Structure 2002 10 185 0 1K9V 11839304 Structural evidence for ammonia tunelling across the (beta-alpha)8-barrel of the imidazole glycerol phosphate synthase bienzyme complex 2001-10-31 2002-02-20 Douangamath, A.,Walker, M.,Beismann-Driemeyer, S.,Vega-Fernandez, M.C.,Sterner, R.,Wilmanns, M. Structural evidence for ammonia tunneling across the (beta alpha)(8) barrel of the imidazole glycerol phosphate synthase bienzyme complex. Structure 2002 10 185 193 1GTT 11863436 CRYSTAL STRUCTURE OF HPCE 2002-01-18 2002-03-08 Tame, J.R.H.,Namba, K.,Dodson, E.J.,Roper, D.I. The Crystal Structure of Hpce, a Bifunctional Decarboxylase/Isomerase with a Multifunctional Fold. Biochemistry 2002 41 2982 0 1GK7 11889032 HUMAN VIMENTIN COIL 1A FRAGMENT (1A) 2001-08-08 2002-03-15 Strelkov, S.,Herrmann, H.,Geisler, N.,Wedig, T.,Zimbelmann, R.,Aebi, U.,Burkhard, P. Conserved Segments 1A and 2B of the Intermediate Filament Dimer: Their Atomic Structures and Role in Filament Assembly. Embo J. 2002 21 1255 0 1HO5 11491293 5'-NUCLEOTIDASE (E. COLI) IN COMPLEX WITH ADENOSINE AND PHOSPHATE 2000-12-08 2002-03-20 Knofel, T.,Strater, N. Mechanism of hydrolysis of phosphate esters by the dimetal center of 5'-nucleotidase based on crystal structures. J.Mol.Biol. 2001 309 239 254 1L0W 11914489 Aspartyl-tRNA synthetase-1 from space-grown crystals 2002-02-14 2002-03-20 Ng, J.D.,Sauter, C.,Lorber, B.,Kirkland, N.,Arnez, J.,Giege, R. Comparative analysis of space-grown and earth-grown crystals of an aminoacyl-tRNA synthetase: space-grown crystals are more useful for structural determination. Acta Crystallogr.,Sect.D 2002 58 645 652 1HA5 11369867 Structural features of a zinc-binding site in the superantigen streptococcal pyrogenic exotoxin A (SpeA1): implications for MHC class II recognition. 2001-03-28 2002-04-03 Baker, M.D.,Gutman, D.M.,Papageorgiou, A.C.,Collins, C.M.,Acharya, K.R. Structural Features of a Zinc Binding Site in the Superantigen Strepococcal Pyrogenic Exotoxin a (Spea1): Implications for Mhc Class II Recognition. Protein Sci. 2001 10 1268 0 1GKM 11895450 HISTIDINE AMMONIA-LYASE (HAL) FROM PSEUDOMONAS PUTIDA INHIBITED WITH L-CYSTEINE 2001-08-16 2002-04-05 Baedeker, M.,Schulz, G.E. Structures of Two Histidine Ammonia-Lyase Modifications and Implications for the Catalytic Mechanism Eur.J.Biochem. 2002 269 1790 0 1JY5 11914487 RNase-related protein from Calystegia sepium 2001-09-11 2002-04-10 Rabijns, A.,Verboven, C.,Rouge, P.,Barre, A.,Van Damme, E.J.,Peumans, W.J.,De Ranter, C.J. Structure of an RNase-related protein from Calystegia sepium. Acta Crystallogr.,Sect.D 2002 58 627 633 1K4V 11592969 1.53 A Crystal Structure of the Beta-Galactoside-alpha-1,3-galactosyltransferase in Complex with UDP 2001-10-09 2002-04-10 Boix, E.,Swaminathan, G.J.,Zhang, Y.,Natesh, R.,Brew, K.,Acharya, K.R. Structure of UDP complex of UDP-galactose:beta-galactoside-alpha -1,3-galactosyltransferase at 1.53-A resolution reveals a conformational change in the catalytically important C terminus. J.Biol.Chem. 2001 276 48608 48614 1G6D 11941511 STRUCTURE OF PEPTIDYL-D(CGCAATTGCG) IN THE PRESENCE OF ZINC IONS 2000-11-04 2002-04-19 Soler-Lopez, M.,Malinina, L.,Tereshko, V.,Zarytova, V.,Subirana, J.A. Interaction of zinc ions with d(CGCAATTGCG) in a 2.9 A resolution X-ray structure. J.Biol.Inorg.Chem. 2002 7 533 538 1JNE 11821393 Crystal structure of imaginal disc growth factor-2 2001-07-23 2002-05-01 Varela, P.F.,Llera, A.S.,Mariuzza, R.A.,Tormo, J. Crystal structure of imaginal disc growth factor-2. A member of a new family of growth-promoting glycoproteins from Drosophila melanogaster. J.Biol.Chem. 2002 277 13229 13236 1GT7 11976494 L-rhamnulose-1-phosphate aldolase from Escherichia coli 2002-01-14 2002-05-03 Kroemer, M.,Schulz, G.E. The Structure of L-Rhamnulose-1-Phosphate Aldolase (Class II) Solved by Low-Resolution Sir Phasing and 20-Fold Ncs Averaging Acta Crystallogr.,Sect.D 2002 58 824 0 1KTJ 12054778 X-ray Structure Of Der P 2, The Major House Dust Mite Allergen 2002-01-16 2002-05-15 Derewenda, U.,Li, J.,Derewenda, Z.,Dauter, Z.,Mueller, G.A.,Rule, G.S.,Benjamin, D.C. The crystal structure of a major dust mite allergen Der p 2, and its biological implications. J.Mol.Biol. 2002 318 189 197 1H4K 11592406 Sulfurtransferase from Azotobacter vinelandii in complex with hypophosphite 2001-05-11 2002-05-16 Bordo, D.,Forlani, F.,Spallarossa, A.,Colnaghi, R.,Carpen, A.,Bolognesi, M.,Pagani, S. A Persulfurated Cysteine Promotes Active Site Reactivity in Azotobacter Vinelandii Rhodanse Biol.Chem. 2001 382 1245 0 1H4M 11592406 Sulfurtransferase from Azotobacter vinelandii in complex with phosphate 2001-05-11 2002-05-16 Bordo, D.,Forlani, F.,Spallarossa, A.,Colnaghi, R.,Carpen, A.,Bolognesi, M.,Pagani, S. A Persulfurated Cysteine Promotes Active Site Reactivity in Azotobacter Vinelandii Rhodanse Biol.Chem. 2001 382 1245 0 1J49 12054772 INSIGHTS INTO DOMAIN CLOSURE, SUBSTRATE SPECIFICITY AND CATALYSIS OF D-LACTATE DEHYDROGENASE FROM LACTOBACILLUS BULGARICUS 2001-08-14 2002-05-29 Razeto, A.,Kochhar, S.,Hottinger, H.,Dauter, M.,Wilson, K.S.,Lamzin, V.S. Domain closure, substrate specificity and catalysis of D-lactate dehydrogenase from Lactobacillus bulgaricus. J.Mol.Biol. 2002 318 109 119 1J4A 12054772 INSIGHTS INTO DOMAIN CLOSURE, SUBSTRATE SPECIFICITY AND CATALYSIS OF D-LACTATE DEHYDROGENASE FROM LACTOBACILLUS BULGARICUS 2001-08-18 2002-05-29 Razeto, A.,Kochhar, S.,Hottinger, H.,Dauter, M.,Wilson, K.S.,Lamzin, V.S. Domain closure, substrate specificity and catalysis of D-lactate dehydrogenase from Lactobacillus bulgaricus. J.Mol.Biol. 2002 318 109 119 1JCM 11856350 TRPC STABILITY MUTANT CONTAINING AN ENGINEERED DISULPHIDE BRIDGE AND IN COMPLEX WITH A CDRP-RELATED SUBSTRATE 2001-06-10 2002-06-10 Ivens, A.,Mayans, O.,Szadkowski, H.,Jurgens, C.,Wilmanns, M.,Kirschner, K. Stabilization of a (betaalpha)8-barrel protein by an engineered disulfide bridge. Eur.J.Biochem. 2002 269 1145 1153 1GO6 12054818 Balhimycin in complex with Lys-D-ala-D-ala 2001-10-19 2002-06-13 Lehmann, C.,Bunkoczi, G.,Vertesy, L.,Sheldrick, G.M. Structures of Glycopeptide Antibiotics with Peptides that Model Bacterial Cell-Wall Precursors J.Mol.Biol. 2002 318 723 0 1KU8 11988090 Crystal structure of Jacalin 2002-01-21 2002-06-19 Bourne, Y.,Astoul, C.H.,Zamboni, V.,Peumans, W.J.,Menu-Bouaouiche, L.,Van Damme, E.J.,Barre, A.,Rouge, P. Structural basis for the unusual carbohydrate-binding specificity of jacalin towards galactose and mannose. Biochem.J. 2002 364 173 180 1LWN 12686153 Crystal structure of rabbit muscle glycogen phosphorylase a in complex with a potential hypoglycaemic drug at 2.0 A resolution 2002-06-01 2002-06-19 Oikonomakos, N.G.,Chrysina, E.D.,Kosmopoulou, M.N.,Leonidas, D.D. Crystal structure of rabbit muscle glycogen phosphorylase a in complex with a potential hypoglycaemic drug at 2.0 A resolution BIOCHEM.BIOPHYS.ACTA PROTEINS 2003 1647 325 332 1D7Z 11829600 CRYSTAL STRUCTURE OF A HEXITOL NUCLEIC ACID (HNA) DUPLEX AT 2.2 A RESOLUTION 1999-10-21 2002-06-28 Declercq, R.,Van Aerschot, A.,Read, R.J.,Herdewijn, P.,Van Meervelt, L. Crystal structure of double helical hexitol nucleic acids. J.Am.Chem.Soc. 2002 124 928 933 1KQP 12077433 NH3-DEPENDENT NAD+ SYNTHETASE FROM BACILLUS SUBTILIS AT 1 A RESOLUTION 2002-01-07 2002-06-28 Symersky, J.,Devedjiev, Y.,Moore, K.,Brouillette, C.,DeLucas, L. NH3-dependent NAD+ synthetase from Bacillus subtilis at 1 A resolution. Acta Crystallogr.,Sect.D 2002 58 1138 1146 1K3U 11756456 CRYSTAL STRUCTURE OF WILD-TYPE TRYPTOPHAN SYNTHASE COMPLEXED WITH N-[1H-INDOL-3-YL-ACETYL]ASPARTIC ACID 2001-10-04 2002-07-03 Weyand, M.,Schlichting, I.,Marabotti, A.,Mozzarelli, A. Crystal structures of a new class of allosteric effectors complexed to tryptophan synthase. J.Biol.Chem. 2002 277 10647 10652 1EA7 14499610 Sphericase 2001-07-10 2002-07-04 Almog, O.,Gonzalez, A.,Klein, D.,Greenblat, H.M.,Braun, S.,Shoham, G. The 0.93A Crystal Structure of Sphericase: A Calcium-Loaded Serine Protease from Bacillus Sphaericus J.Mol.Biol. 2003 332 1071 0 1KPM 12079380 First Structural Evidence of a Specific Inhibition of Phospholipase A2 by Vitamin E and its Implications in Inflammation: Crystal Structure of the Complex Formed between Phospholipase A2 and Vitamin E at 1.8 A Resolution. 2002-01-01 2002-07-10 Chandra, V.,Jasti, J.,Kaur, P.,Betzel, C.,Srinivasan, A.,Singh, T.P. First Structural Evidence of a Specific Inhibition of Phospholipase A2 by alpha-Tocopherol (Vitamin E) and its Implications in Inflammation: Crystal Structure of the Complex Formed Between Phospholipase A2 and alpha-Tocopherol at 1.8 A Resolution J.Mol.Biol. 2002 320 215 222 1LNI 12136142 CRYSTAL STRUCTURE ANALYSIS OF A RIBONUCLEASE FROM STREPTOMYCES AUREOFACIENS AT ATOMIC RESOLUTION (1.0 A) 2002-05-03 2002-07-31 Sevcik, J.,Lamzin, V.S.,Dauter, Z.,Wilson, K.S. Atomic resolution data reveal flexibility in the structure of RNase Sa. Acta Crystallogr.,Sect.D 2002 58 1307 1313 1LQT 12102623 A covalent modification of NADP+ revealed by the atomic resolution structure of FprA, a Mycobacterium tuberculosis oxidoreductase 2002-05-13 2002-07-31 Bossi, R.T.,Aliverti, A.,Raimondi, D.,Fischer, F.,Zanetti, G.,Ferrari, D.,Tahallah, N.,Maier, C.S.,Heck, A.J.R.,Rizzi, M.,Mattevi, A. A covalent modification of NADP+ revealed by the atomic resolution structure of FprA, a Mycobacterium tuberculosis oxidoreductase. Biochemistry 2002 41 8807 8818 1LQU 12102623 Mycobacterium tuberculosis FprA in complex with NADPH 2002-05-13 2002-07-31 Bossi, R.T.,Aliverti, A.,Raimondi, D.,Fischer, F.,Zanetti, G.,Ferrari, D.,Tahallah, N.,Maier, C.S.,Heck, A.J.R.,Rizzi, M.,Mattevi, A. A covalent modification of NADP+ revealed by the atomic resolution structure of FprA, a Mycobacterium tuberculosis oxidoreductase. Biochemistry 2002 41 8807 8818 1GJQ 11829453 Pseudomonas aeruginosa cd1 nitrite reductase reduced cyanide complex 2001-08-01 2002-08-01 Sun, W.,Arese, M.,Brunori, M.,Nurizzo, D.,Brown, K.,Cambillau, C.,Tegoni, M.,Cutruzzola, F. Cyanide Binding to Cd(1) Nitrite Reductase from Pseudomonas Aeruginosa: Role of the Active-Site His369 in Ligand Stabilization. Biochem.Biophys.Res.Commun. 2002 291 1 0 1K2Z 12071949 The Crystal Structure of d(GGCCAATTGG) Complexed with Distamycin. 2001-10-01 2002-08-09 Uytterhoeven, K.,Sponer, J.,Van Meervelt, L. Two 1 : 1 binding modes for distamycin in the minor groove of d(GGCCAATTGG). Eur.J.Biochem. 2002 269 2868 2877 1H1N 12147244 Atomic resolution structure of the major endoglucanase from Thermoascus aurantiacus 2002-07-19 2002-08-12 Van Petegem, F.,Vandenberghe, I.,Bhat, M.K.,Van Beeumen, J. Atomic Resolution Structure of the Major Endoglucanase from Thermoascus Aurantiacus Biochem.Biophys.Res.Commun. 2002 296 161 0 1M1Q 12080059 P222 oxidized structure of the tetraheme cytochrome c from Shewanella oneidensis MR1 2002-06-20 2002-08-14 Leys, D.,Meyer, T.E.,Tsapin, A.I.,Nealson, K.H.,Cusanovich, M.A.,Van Beeumen, J.J. Crystal structures at atomic resolution reveal the novel concept of 'electron-harvesting' as a role for the small tetraheme cytochrome c J.Biol.Chem. 2002 277 35703 35711 1M1R 12080059 Reduced p222 crystal structure of the tetraheme cytochrome c of Shewanella oneidensis MR1 2002-06-20 2002-08-14 Leys, D.,Meyer, T.E.,Tsapin, A.I.,Nealson, K.H.,Cusanovich, M.A.,Van Beeumen, J.J. Crystal structures at atomic resolution reveal the novel concept of 'electron-harvesting' as a role for the small tetraheme cytochrome c J.Biol.Chem. 2002 277 35703 35711 1G3X 12135355 INTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMER 2000-10-25 2002-08-16 Malinina, L.,Soler-Lopez, M.,Aymami, J.,Subirana, J.A. Intercalation of an acridine-peptide drug in an AA/TT base step in the crystal structure of [d(CGCGAATTCGCG)](2) with six duplexes and seven Mg(2+) ions in the asymmetric unit. Biochemistry 2002 41 9341 9348 1FV0 12206661 FIRST STRUCTURAL EVIDENCE OF THE INHIBITION OF PHOSPHOLIPASE A2 BY ARISTOLOCHIC ACID: CRYSTAL STRUCTURE OF A COMPLEX FORMED BETWEEN PHOSPHOLIPASE A2 AND ARISTOLOCHIC ACID 2000-09-18 2002-08-28 Chandra, V.,Jasti, J.,Kaur, P.,Srinivasan, A.,Betzel, C.,Singh, T.P. Structural Basis of Phospholipase A2 Inhibition for the Synthesis of Prostaglandins by the Plant Alkaloid Aristolochic Acid from a 1.7 A Crystal Structure Biochemistry 2002 41 10914 10919 1M10 12183630 Crystal structure of the complex of Glycoprotein Ib alpha and the von Willebrand Factor A1 Domain 2002-06-16 2002-08-28 Huizinga, E.G.,Tsuji, S.,Romijn, R.A.,Schiphorst, M.E.,de Groot, P.G.,Sixma, J.J.,Gros, P. Structures of glycoprotein Ibalpha and its complex with von Willebrand factor A1 domain. Science 2002 297 1176 1179 1LUA 12176390 Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1 complexed with NADP 2002-05-22 2002-09-11 Ermler, U.,Hagemeier, C.H.,Roth, A.,Demmer, U.,Grabarse, W.,Warkentin, E.,Vorholt, J.A. Structure of methylene-tetrahydromethanopterin dehydrogenase from methylobacterium extorquens AM1. Structure 2002 10 1127 1137 1M5F 12215417 X-RAY STRUCTURE OF THE GLUR2 LIGAND BINDING CORE (S1S2J-Y702F) IN COMPLEX WITH ACPA AT 1.95 A RESOLUTION 2002-07-09 2002-09-18 Hogner, A.,Kastrup, J.S.,Jin, R.,Liljefors, T.,Mayer, M.L.,Egebjerg, J.,Larsen, I.K.,Gouaux, E. Structural Basis for AMPA Receptor Activation and Ligand Selectivity: Crystal Structures of Five Agonist Complexes with the GluR2 Ligand-binding Core J.Mol.Biol. 2002 322 93 109 1MNZ Atomic structure of Glucose isomerase 2002-09-06 2002-09-25 Nowak, E.,Panjikar, S.,Tucker, P.A. Atomic structure of Glucose isomerase To be published 0 0 0 0 1GXY 12270706 crystal structure of the eucaryotic mono-ADP-ribosyltransferase ART2.2; CRYSTAL FORM A (P21) 2002-04-15 2002-09-26 Mueller-Dieckmann, C.,Ritter, H.,Haag, F.,Koch-Nolte, F.,Schulz, G.E. Structure of the Ecto-Adp-Ribosyl Transferase Art2.2 From Rat J.Mol.Biol. 2002 322 687 0 1JQ8 12351825 Design of specific inhibitors of phospholipase A2: Crystal structure of a complex formed between phospholipase A2 from Daboia russelli pulchella and a designed pentapeptide Leu-Ala-Ile-Tyr-Ser at 2.0 resolution 2001-08-04 2002-11-06 Chandra, V.,Jasti, J.,Kaur, P.,Dey, S.,Srinivasan, A.,Betzel, C.h.,Singh, T.P. Design of specific peptide inhibitors of phospholipase A2: structure of a complex formed between Russell's viper phospholipase A2 and a designed peptide Leu-Ala-Ile-Tyr-Ser (LAIYS). ACTA CRYSTALLOGR.,SECT.D 2002 58 1813 1819 1JQ9 12186870 Crystal structure of a complex formed between phospholipase A2 from Daboia russelli pulchella and a designed pentapeptide Phe-Leu-Ser-Tyr-Lys at 1.8 resolution 2001-08-04 2002-11-06 Chandra, V.,Jasti, J.,Kaur, P.,Dey, S.,Perbandt, M.,Srinivasan, A.,Betzel, C.,Singh, T.P. Crystal Structure of a Complex Formed between a Snake Venom Phospholipase A2 and a Potent Peptide Inhibitor Phe-Leu-Ser-Tyr-Lys at 1.8 A Resolution J.BIOL.CHEM. 2002 277 41079 41085 1MZO 12454503 Crystal structure of pyruvate formate-lyase with pyruvate 2002-10-09 2002-12-11 Lehtio, L.,Leppanen, V.M.,Kozarich, J.W.,Goldman, A. Structure of Escherichia coli pyruvate formate-lyase with pyruvate. Acta Crystallogr.,Sect.D 2002 58 2209 2212 1IX9 Crystal Structure of the E. coli Manganase(III) superoxide dismutase mutant Y174F at 0.90 angstroms resolution. 2002-06-17 2002-12-17 Anderson, B.F.,Edwards, R.A.,Whittaker, M.M.,Whittaker, J.W.,Baker, E.N.,Jameson, G.B. Structures at 0.90 A resolution of the oxidised and reduced forms of the Y174F mutant of the manganese superoxide dismutase from Escherichia coli To be Published 0 0 0 0 1IXB CRYSTAL STRUCTURE OF THE E. COLI MANGANESE(II) SUPEROXIDE DISMUTASE MUTANT Y174F AT 0.90 ANGSTROMS RESOLUTION. 2002-06-18 2002-12-18 Anderson, B.F.,Edwards, R.A.,Whittaker, M.M.,Whittaker, J.W.,Baker, E.N.,Jameson, G.B. Structures at 0.90 A resolution of the oxidised and reduced forms of the Y174F mutant of the manganese superoxide dismutase from Escherichia coli To be Published 0 0 0 0 1HFB 12540830 Crystal structure of the tyrosine-regulated 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from Saccharomyces cerevisiae complexed with phosphoenolpyruvate 2000-11-30 2003-01-14 Hartmann, M.,Schneider, T.R.,Pfeil, A.,Heinrich, G.,Lipscomb, W.,Braus, G.H. Evolution of Feedback-Inhibited Beta /Alpha Barrel Isoenzymes by Gene Duplication and a Single Mutation Proc.Natl.Acad.Sci.USA 2003 100 862 0 1GU2 16341897 Crystal structure of oxidized cytochrome c'' from Methylophilus methylotrophus 2002-01-22 2003-01-16 Enguita, F.J.,Pohl, E.,Turner, D.L.,Santos, H.,Carrondo, M.A. Structural Evidence for a Proton Transfer Pathway Coupled with Haem Reduction of Cytochrome C"" from Methylophilus Methylotrophus. J.Biol.Inorg.Chem. 2006 11 189 0 1DT2 10752623 CRYSTAL STRUCTURE OF EXFOLIATIVE TOXIN B 2000-01-11 2003-01-21 Papageorgiou, A.C.,Plano, L.R.,Collins, C.M.,Acharya, K.R. Structural similarities and differences in Staphylococcus aureus exfoliative toxins A and B as revealed by their crystal structures. Protein Sci. 2000 9 610 618 1M38 Structure of Inorganic Pyrophosphatase 2002-06-27 2003-01-28 Kuranova, I.P.,Polyakov, K.M.,Smirnova, E.A.,Hohne, W.E.,Lamzin, V.S.,Meijers, R. Three-dimensional structure of Saccharomyces cerevisiae inorganic pyrophosphatase complexed with cobalt and phosphate ions CRYSTALLOGRAPHY REPORTS 2003 48 953 958 1MCV 12554935 Crystal Structure Analysis of a Hybrid Squash Inhibitor in Complex with Porcine Pancreatic Elastase 2002-08-06 2003-02-04 Ay, J.,Hilpert, K.,Krauss, N.,Schneider-Mergener, J.,Hohne, W. Structure of a hybrid squash inhibitor in complex with porcine pancreatic elastase at 1.8 A resolution. Acta Crystallogr.,Sect.D 2003 59 247 254 1N4G 12435731 Structure of CYP121, a Mycobacterial P450, in Complex with Iodopyrazole 2002-10-31 2003-02-04 Leys, D.,Mowat, C.G.,McLean, K.J.,Richmond, A.,Chapman, S.K.,Walkinshaw, M.D.,Munro, A.W. Atomic structure of Mycobacterium tuberculosis CYP121 to 1.06 A reveals novel features of cytochrome P450. J.Biol.Chem. 2003 278 5141 5147 1NQS Structural Characterisation of the Holliday Junction formed by the sequence d(TCGGTACCGA) at 1.97 A 2003-01-22 2003-02-04 Cardin, C.J.,Gale, B.C.,Thorpe, J.H.,Texieira, S.C.M.,Gan, Y.,Moraes, M.I.A.A.,Brogden, A.L. Structural Analysis of two Holliday junctions formed by the sequences TCGGTACCGA and CCGGTACCGG To be Published 0 0 0 0 1M0U 12547198 Crystal Structure of the Drosophila Glutathione S-transferase-2 in Complex with Glutathione 2002-06-14 2003-02-11 Agianian, B.,Tucker, P.A.,Schouten, A.,Leonard, K.,Bullard, B.,Gros, P. Structure of a Drosophila Sigma Class Glutathione S-transferase Reveals a Novel Active Site Topography Suited for Lipid Peroxidation Products J.Mol.Biol. 2003 326 151 165 1MF5 12560479 GCATGCT Quadruplex 2002-08-09 2003-02-11 Thorpe, J.H.,Teixeira, S.C.M.,Gale, B.C.,Cardin, C.J. Crystal structure of the complementary quadruplex formed by d(GCATGCT) at atomic resolution Nucleic Acids Res. 2003 31 844 849 1N0U 12692531 Crystal structure of yeast elongation factor 2 in complex with sordarin 2002-10-15 2003-02-11 Jorgensen, R.,Ortiz, P.A.,Carr-Schmid, A.,Nissen, P.,Kinzy, T.G.,Andersen, G.R. Two crystal structures demonstrate large conformational changes in the eukaryotic ribosomal translocase. Nat. Struct. Biol. 2003 10 379 385 1NT8 Structural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 2.00 A 2003-01-29 2003-02-11 Cardin, C.J.,Gale, B.C.,Thorpe, J.H.,Texieira, S.C.M.,Gan, Y.,Moraes, M.I.A.A.,Brogden, A.L. Structural Analysis of two Holliday Junctions formed by the sequences TCGGTACCGA and CCGGTACCGG To be Published 0 0 0 0 1NVN Structural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 1.8 A 2003-02-04 2003-02-25 Cardin, C.J.,Gale, B.C.,Thorpe, J.H.,Teixeira, S.C.M.,Gan, Y.,Moraes, M.I.A.A.,Brogden, A.L. Structural analysis of two Holliday junctions formed by the sequences TCGGTACCGA and CCGGTACCGG To be Published 0 0 0 0 1L4J 12614611 Holliday Junction TCGGTACCGA with Na and Ca Binding Sites. 2002-03-05 2003-03-04 Thorpe, J.H.,Gale, B.C.,Teixeira, S.C.M.,Cardin, C.J. Conformational and Hydration Effects of Site-selective Sodium, Calcium and Strontium Ion Binding to the DNA Holliday Junction Structure d(TCGGTACCGA)4 J.Mol.Biol. 2003 327 97 109 1OBD SAICAR-synthase complexed with ATP 2003-01-30 2003-03-06 Antonyuk, S.V.,Grebenko, A.I.,Levdikov, V.M.,Urusova, D.V.,Melik-Adamyan, W.R.,Lamzin, V.S.,Wilson, K. X-Ray Structure of Saicar-Synthase Complexed with ATP Kristallografiya 2001 46 620 0 1HJV 12775711 Crystal structure of hcgp-39 in complex with chitin tetramer 2003-02-28 2003-03-11 Houston, D.R.,Recklies, A.D.,Krupa, J.C.,Van Aalten, D.M.F. Structure and Ligand-Induced Conformational Change of the 39-kDa Glycoprotein from Human Articular Chondrocytes. J.Biol.Chem. 2003 278 30206 0 1GU7 12614607 Enoyl thioester reductase from Candida tropicalis 2002-01-24 2003-03-13 Airenne, T.T.,Torkko, J.M.,Van Der Plas, S.,Sormunen, R.T.,Kastaniotis, A.J.,Wierenga, R.K.,Hiltunen, J.K. Structure-Function Analysis of Enoyl Thioester Reductase Involved in Mitochondrial Maintenance J.Mol.Biol. 2003 327 47 0 1NMX 12614151 Crystal structure of human thymidylate kinase with FLTMP and ADP 2003-01-12 2003-03-18 Ostermann, N.,Segura-Pena, D.,Meier, C.,Veit, T.,Monnerjahn, M.,Konrad, M.,Lavie, A. Structures of human thymidylate kinase in complex with prodrugs: implications for the structure-based design of novel compounds Biochemistry 2003 42 2568 2577 1NMY 12614151 Crystal structure of human thymidylate kinase with FLTMP and AppNHp 2003-01-12 2003-03-18 Ostermann, N.,Segura-Pena, D.,Meier, C.,Veit, T.,Monnerjahn, M.,Konrad, M.,Lavie, A. Structures of human thymidylate kinase in complex with prodrugs: implications for the structure-based design of novel compounds Biochemistry 2003 42 2568 2577 1NN3 12614151 Crystal structure of human thymidylate kinase with d4TMP + ADP 2003-01-12 2003-03-18 Ostermann, N.,Segura-Pena, D.,Meier, C.,Veit, T.,Monnerjahn, M.,Konrad, M.,Lavie, A. Structures of human thymidylate kinase in complex with prodrugs: implications for the structure-based design of novel compounds Biochemistry 2003 42 2568 2577 1NN5 12614151 Crystal structure of human thymidylate kinase with d4TMP + AppNHp 2003-01-12 2003-03-18 Ostermann, N.,Segura-Pena, D.,Meier, C.,Veit, T.,Monnerjahn, M.,Konrad, M.,Lavie, A. Structures of human thymidylate kinase in complex with prodrugs: implications for the structure-based design of novel compounds Biochemistry 2003 42 2568 2577 1OAG 12640445 Ascorbate peroxidase from soybean cytosol 2003-01-13 2003-03-20 Sharp, K.H.,Mewies, M.,Moody, P.C.E.,Raven, E.L. Crystal Structure of the Ascorbate Peroxidase-Ascorbate Complex Nat.Struct.Biol. 2003 10 303 0 1OPO THE STRUCTURE OF CARNATION MOTTLE VIRUS 2003-03-06 2003-04-01 Morgunova, E.,Dauter, Z.,Fry, E.,Stuart, D.,Stel'mashchuk, V.,Mikhailov, A.M.,Wilson, K.S.,Vainshtein, B.K. The atomic structure of Carnation Mottle Virus capsid protein Febs Lett. 1994 338 267 271 1GXB 12093726 ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE IN COMPLEX WITH PYROPHOSPHATE AND MAGNESIUM 2002-04-02 2003-04-03 Mayans, O.,Ivens, A.,Nissen, L.J.,Kirschner, K.,Wilmanns, M. Structural Analysis of Two Enzymes Catalysing Reverse Metabolic Reactions Implies Common Ancestry Embo J. 2002 21 3245 0 1OBO 12682068 W57L flavodoxin from Anabaena 2003-01-31 2003-04-24 Lostao, A.,Daoudi, F.,Irun, M.P.,Ramon, A.,Fernandez-Cabrera, C.,Romero, A.,Sancho, J. How Fmn Binds to Anabaena Apoflavodoxin: A Hydrophobic Encounter at an Open Binding Site J.Biol.Chem. 2003 278 24053 0 1K9U 12356717 Crystal Structure of the Calcium-Binding Pollen Allergen Phl p 7 (Polcalcin) at 1.75 Angstroem 2001-10-30 2003-04-30 Verdino, P.,Westritschnig, K.,Valenta, R.,Keller, W. The cross-reactive calcium-binding pollen allergen, Phl p 7, reveals a novel dimer assembly EMBO J. 2002 21 5007 5016 1M6G 12614611 Structural Characterisation of the Holliday Junction TCGGTACCGA 2002-07-16 2003-05-06 Thorpe, J.H.,Gale, B.C.,Teixeira, S.C.M.,Cardin, C.J. Conformational and hydration effects of site-selective sodium, calcium and strontium ion binding to the DNA Holliday junction structure d(TCGGTACCGA)(4) J.Mol.Biol. 2003 327 97 109 1O7Y 12737818 Crystal structure of IP-10 M-form 2002-11-20 2003-05-08 Swaminathan, G.J.,Holloway, D.E.,Colvin, R.A.,Campanella, G.K.,Papageorgiou, A.C.,Luster, A.D.,Acharya, K.R. Crystal Structures of Oligomeric Forms of the Ip-10/Cxcl10 Chemokine Structure 2003 11 521 0 1HK3 12743361 Human serum albumin mutant r218p complexed with thyroxine (3,3',5,5'-tetraiodo-l-thyronine) 2003-03-05 2003-05-16 Petitpas, I.,Petersen, C.E.,Ha, C.E.,Bhattacharya, A.A.,Zunszain, P.A.,Ghuman, J.,Bhagavan, N.V.,Curry, S. Structural Basis of Albumin-Thyroxine Interactions and Familial Dysalbuminemic Hyperthyroxinemia Proc.Natl.Acad.Sci.USA 2003 100 6440 0 1LN8 Crystal Structure of a New Isoform of Phospholipase A2 from Naja naja sagittifera at 1.6 A Resolution 2002-05-03 2003-05-20 Singh, R.K.,Vikram, P.,Paramasivam, M.,Jabeen, T.,Sharma, S.,Kaur, P.,Srinivasan, A.,Singh, T.P. Crystal Structure of a New Form of Phospholipase A2 from Naja naja sagittifera at 1.6 A Resolution to be published 0 0 0 0 1OWS Crystal structure of a C49 Phospholipase A2 from Indian cobra reveals carbohydrate binding in the hydrophobic channel 2003-03-30 2003-05-20 Jabeen, T.,Jasti, J.,Singh, N.,Singh, R.K.,Sharma, S.,Kaur, P.,Singh, T.P. Crystal structure of a C49 Phospholipase A2 from Indian cobra reveals carbohydrate binding in the hydrophobic channel To be Published 0 0 0 0 1OA9 12767825 Structure of Melanocarpus albomyces endoglucanase 2003-01-04 2003-05-29 Hirvonen, M.,Papageorgiou, A.C. Crystal Structure of a Family 45 Endoglucanase from Melanocarpus Albomyces: Mechanistic Implications Based on the Free and Cellobiose-Bound Forms J.Mol.Biol. 2003 329 403 0 1MWO 12482867 Crystal Structure Analysis of the Hyperthermostable Pyrocoocus woesei alpha-amylase 2002-09-30 2003-06-10 Linden, A.,Mayans, O.,Meyer-Klaucke, W.,Antranikian, G.,Wilmanns, M. Differential Regulation of a Hyperthermophilic alpha-Amylase with a Novel (Ca,Zn) Two-metal Center by Zinc J.Biol.Chem. 2003 278 9875 9884 1G0Z SPECIFIC MUTATIONS IN KRAIT PLA2 LEAD TO DIMERIZATION OF PROTEIN MOLECULES: CRYSTAL STRUCTURE OF KRAIT PLA2 AT 2.1 RESOLUTION 2000-10-10 2003-06-17 Gourinath, S.,Singh, G.,Sharma, S.,Bhanumathi, S.,Betzel, C.,Paramsivam, M.,Srinivasan, A.,Singh, T.P. Specific mutations in Krait PLA2 lead to dimerization of protein molecules: Crystal structure of Krait PLA2 at 2.1 resolution. To be Published 0 0 0 0 1G2X 16508078 Sequence induced trimerization of krait PLA2: crystal structure of the trimeric form of krait PLA2 2000-10-22 2003-06-17 Singh, G.,Gourinath, S.,Saravanan, K.,Sharma, S.,Bhanumathi, S.,Betzel, C.h.,Srinivasan, A.,Singh, T.P. Sequence-induced trimerization of phospholipase A2: structure of a trimeric isoform of PLA2 from common krait (Bungarus caeruleus) at 2.5 A resolution. Acta Crystallogr.,Sect.F 2005 61 8 13 1MQD 12417307 X-ray structure of the GluR2 ligand-binding core (S1S2J) in complex with (S)-Des-Me-AMPA at 1.46 A resolution. Crystallization in the presence of lithium sulfate. 2002-09-16 2003-07-01 Kasper, C.,Lunn, M.L.,Liljefors, T.,Gouaux, E.,Egebjerg, J.,Kastrup, J.S. GluR2 ligand-binding core complexes: Importance of the isoxazolol moiety and 5-substituent for the binding mode of AMPA-type agonists. FEBS Lett. 2002 531 173 178 1M5W 12269807 1.96 A Crystal Structure of Pyridoxine 5'-Phosphate Synthase in Complex with 1-deoxy-D-xylulose phosphate 2002-07-10 2003-07-15 Yeh, J.I.,Du, S.,Pohl, E.,Cane, D.E. Multistate Binding in Pyridoxine 5'-Phosphate Synthase: 1.96 A Crystal Structure in Complex with 1-deoxy-D-xylulose phosphate Biochemistry 2002 41 11649 11657 1ON7 12709431 Unmethylated form of C-phycocyanin from Themosynechococcus vulcanus at 2.7A 2003-02-27 2003-07-29 Adir, N.,Lerner, N. The crystal structure of a novel unmethylated form of C-phycocyanin, a possible connector between cores and rods in pycobilisomes J.Biol.Chem. 2003 278 25926 25932 1OHB 12875848 Acetylglutamate kinase from Escherichia coli complexed with ADP and sulphate 2003-05-23 2003-07-31 Gil-Ortiz, F.,Ramon-Maiques, S.,Fita, I.,Rubio, V. The Course of Phosphorus in the Reaction of N-Acetyl-L-Glutamate Kinase, Determined from the Structures of Crystalline Complexes, Including a Complex with an Alf(4)(-) Transition State Mimic J.Mol.Biol. 2003 331 231 0 1NSW 12837806 The Crystal Structure of the K18G Mutant of the thioredoxin from Alicyclobacillus acidocaldarius 2003-01-28 2003-08-05 Bartolucci, S.,De Simone, G.,Galdiero, S.,Improta, R.,Menchise, V.,Pedone, C.,Pedone, E.,Saviano, M. An integrated structural and computational study of the thermostability of two thioredoxin mutants from Alicyclobacillus acidocaldarius J.Bacteriol. 2003 185 4285 4289 1NW2 12837806 The crystal structure of the mutant R82E of Thioredoxin from Alicyclobacillus acidocaldarius 2003-02-05 2003-08-05 Bartolucci, S.,De Simone, G.,Galdiero, S.,Improta, R.,Menchise, V.,Pedone, C.,Pedone, E.,Saviano, M. An integrated structural and computational study of the thermostability of two thioredoxin mutants from Alicyclobacillus acidocaldarius J.Bacteriol. 2003 185 4285 4289 1H56 12888347 Structural and biochemical characterization of a new magnesium ion binding site near Tyr94 in the restriction endonuclease PvuII 2001-05-20 2003-08-07 Spyridaki, A.,Matzen, C.,Lanio, T.,Jeltsch, A.,Simoncsits, A.,Athanasiadis, A.,Scheuring-Vanamee, E.,Kokkinidis, M.,Pingoud, A. Structural and Biochemical Characterization of a New Mg(2+) Binding Site Near Tyr94 in the Restriction Endonuclease PvuII. J.Mol.Biol. 2003 331 395 0 1OH5 12907723 THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH A C:A MISMATCH 2003-05-23 2003-08-08 Natrajan, G.,Lamers, M.H.,Enzlin, J.H.,Winterwerp, H.H.K.,Perrakis, A.,Sixma, T.K. Structures of E. Coli DNA Mismatch Repair Enzyme Muts in Complex with Different Mismatches: A Common Recognition Mode for Diverse Substrates Nucleic Acids Res. 2003 31 4814 0 1M69 Atomic Resolution Structure of 5Br-9amino-DACA with d[CGTACG]2 2002-07-15 2003-08-19 Teixeira, S.C.M.,Thorpe, J.H.,Todd, A.K.,Cardin, C.J. Heavy Going: the Atomic Resolution Structure of a Topoisomerase II Poison Intercalating into DNA in Multiple Orientations Also Reveals a Multiple Adenine-Thymine Hydrogen Bonding Pattern To be Published 0 0 0 0 1OG1 12939142 CRYSTAL STRUCTURE OF THE EUCARYOTIC MONO-ADP-RIBOSYLTRANSFERASE ART2.2 IN COMPLEX WITH TAD 2003-04-23 2003-08-28 Ritter, H.,Koch-Nolte, F.,Marquez, V.E.,Schulz, G.E. Substrate Binding and Catalysis of Ecto-Adp-Ribosyltransferase 2.2 From Rat Biochemistry 2003 42 10155 0 1LV8 15342253 Crystal structure of calf spleen purine nucleoside phosphorylase in a new space group with full trimer in the asymmetric unit 2002-05-27 2003-09-02 Bzowska, A.,Koellner, G.,Wielgus-Kutrowska, B.,Stroh, A.,Raszewski, G.,Holy, A.,Steiner, T.,Frank, J. Crystal structure of calf spleen purine nucleoside phosphorylase with two full trimers in the asymmetric unit: important implications for the mechanism of catalysis J.Mol.Biol. 2004 342 1015 1032 1LVU 15342253 Crystal structure of calf spleen purine nucleoside phosphorylase in a new space group with full trimer in the asymmetric unit 2002-05-29 2003-09-02 Bzowska, A.,Koellner, G.,Wielgus-Kutrowska, B.,Stroh, A.,Raszewski, G.,Holy, A.,Steiner, T.,Frank, J. Crystal structure of calf spleen purine nucleoside phosphorylase with two full trimers in the asymmetric unit: important implications for the mechanism of catalysis J.Mol.Biol. 2004 342 1015 1032 1M3J CRYSTAL form II of perfringolysin O 2002-06-28 2003-09-02 ROSSJOHN, J.,PARKER, M.,POLEKHINA, G.,FEIL, S.,TWETEN, R. STRUCTURAL SNAPSHOTS IN THE MOLECULAR MECHANISM OF PFO REVEALED To be Published 0 0 0 0 1P2D 12930991 Crystal Structure of Glycogen Phosphorylase B in complex with Beta Cyclodextrin 2003-04-15 2003-09-02 Pinotsis, N.,Leonidas, D.D.,Chrysina, E.D.,Oikonomakos, N.G.,Mavridis, I.M. The binding of beta- and gamma-cyclodextrins to glycogen phosphorylase b: Kinetic and crystallographic studies. Protein Sci. 2003 12 1914 1924 1P2G 12930991 Crystal Structure of Glycogen Phosphorylase B in complex with Gamma Cyclodextrin 2003-04-15 2003-09-02 Pinotsis, N.,Leonidas, D.D.,Chrysina, E.D.,Oikonomakos, N.G.,Mavridis, I.M. The binding of beta- and gamma-cyclodextrins to glycogen phosphorylase b: Kinetic and crystallographic studies. Protein Sci. 2003 12 1914 1924 1HHU 12054818 Balhimycin in complex with D-Ala-D-Ala 2000-12-28 2003-09-05 Lehmann, C.,Bunkoczi, G.,Vertesy, L.,Sheldrick, G.M. Structures of Glycopeptide Antibiotics with Peptides that Model Bacterial Cell-Wall Precursors J.Mol.Biol. 2002 318 723 0 1HHY 12054818 Deglucobalhimycin in complex with D-Ala-D-Ala 2000-12-29 2003-09-05 Lehmann, C.,Bunkoczi, G.,Vertesy, L.,Sheldrick, G.M. Structures of Glycopeptide Antibiotics with Peptides that Model Bacterial Cell-Wall Precursors J.Mol.Biol. 2002 318 723 0 1HHZ 12054818 Deglucobalhimycin in complex with cell wall pentapeptide 2000-12-29 2003-09-05 Lehmann, C.,Bunkoczi, G.,Vertesy, L.,Sheldrick, G.M. Structures of Glycopeptide Antibiotics with Peptides that Model Bacterial Cell-Wall Precursors J.Mol.Biol. 2002 318 723 0 1OUS 12909014 Lecb (PA-LII) calcium-free 2003-03-25 2003-09-09 Loris, R.,Tielker, D.,Jaeger, K.-E.,Wyns, L. Structural Basis of Carbohydrate Recognition by the Lectin LecB from Pseudomonas aeruginosa J.MOL.BIOL. 2003 331 861 870 1UN2 14747707 Crystal structure of circularly permuted CPDSBA_Q100T99: Preserved Global Fold and Local Structural Adjustments 2003-09-03 2003-09-26 Manjasetty, B.A.,Hennecke, J.,Glockshuber, R.,Heinemann, U. Structure of Circularly Permuted Dsba(Q100T99): Preserved Global Fold and Local Structural Adjustments Acta Crystallogr.,Sect.D 2004 60 304 0 1OQS 14501106 Crystal Structure of RV4/RV7 Complex 2003-03-11 2003-09-30 Perbandt, M.,Tsai, I.H.,Fuchs, A.,Banumathi, S.,Rajashankar, K.R.,Georgieva, D.,Kalkura, N.,Singh, T.P.,Genov, N.,Betzel, C. Structure of the heterodimeric neurotoxic complex viperotoxin F (RV-4/RV-7) from the venom of Vipera russelli formosensis at 1.9 A resolution. Acta Crystallogr.,Sect.D 2003 59 1679 1687 1PJ6 12912903 Crystal structure of dimethylglycine oxidase of Arthrobacter globiformis in complex with folic acid 2003-06-01 2003-10-07 Leys, D.,Basran, J.,Scrutton, N.S. Channelling and formation of 'active' formaldehyde in dimethylglycine oxidase. Embo J. 2003 22 4038 4048 1PJ7 12912903 Structure of dimethylglycine oxidase of Arthrobacter globiformis in complex with folinic acid 2003-06-01 2003-10-07 Leys, D.,Basran, J.,Scrutton, N.S. Channelling and formation of 'active' formaldehyde in dimethylglycine oxidase. Embo J. 2003 22 4038 4048 1NH2 12972251 Crystal structure of a yeast TFIIA/TBP/DNA complex 2002-12-18 2003-10-21 Bleichenbacher, M.,Tan, S.,Richmond, T.J. Novel interactions between the components of human and yeast TFIIA/TBP/DNA complexes. J.Mol.Biol. 2003 332 783 793 1NVP 12972251 HUMAN TFIIA/TBP/DNA COMPLEX 2003-02-04 2003-10-21 Bleichenbacher, M.,Tan, S.,Richmond, T.J. Novel interactions between the components of human and yeast TFIIA/TBP/DNA complexes. J.Mol.Biol. 2003 332 783 793 1R2O d(GCATGCT) + Ni2+ 2003-09-29 2003-10-21 Cardin, J.C.,Gan, Y.,Thorpe, J.H.,Teixeira, S.C.M.,Gale, B.C.,Moraes, M.I.A. Metal Ion Distribution and Stabilization of the DNA Quadruplex Structure Formed by d(GCATGCT) To be published 0 0 0 0 1OMK 12876373 The Crystal Structure of d(CACG(5IU)G) 2003-02-25 2003-11-04 Schuerman, G.,Van Hecke, K.,Van Meervelt, L. Exploration of the influence of 5-iodo-2'-deoxyuridine incorporation on the structure of d[CACG(IDU)G]. Acta Crystallogr.,Sect.D 2003 59 1525 1528 1KQ6 p47phox PX domain 2002-01-04 2003-11-11 Wahl, M.,Delbrueck, H.,Oschkinat, H.,Heinemann, U. p47phox PX domain To be Published 0 0 0 0 1PPZ 12937176 Trypsin complexes at atomic and ultra-high resolution 2003-06-17 2003-11-11 Schmidt, A.,Jelsch, C.,Ostergaard, P.,Rypniewski, W.,Lamzin, V.S. Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS. J.Biol.Chem. 2003 278 43357 43362 1PQ5 12937176 Trypsin at pH 5, 0.85 A 2003-06-18 2003-11-11 Schmidt, A.,Jelsch, C.,Ostergaard, P.,Rypniewski, W.,Lamzin, V.S. Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS. J.Biol.Chem. 2003 278 43357 43362 1PQ7 12937176 Trypsin at 0.8 A, pH5 / borax 2003-06-18 2003-11-11 Schmidt, A.,Jelsch, C.,Ostergaard, P.,Rypniewski, W.,Lamzin, V.S. Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS. J.Biol.Chem. 2003 278 43357 43362 1PQA 12937176 Trypsin with PMSF at atomic resolution 2003-06-18 2003-11-11 Schmidt, A.,Jelsch, C.,Ostergaard, P.,Rypniewski, W.,Lamzin, V.S. Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS. J.Biol.Chem. 2003 278 43357 43362 1Q0R 12878604 Crystal structure of aclacinomycin methylesterase (RdmC) with bound product analogue, 10-decarboxymethylaclacinomycin T (DcmaT) 2003-07-17 2003-11-25 Jansson, A.,Niemi, J.,Mantsala, P.,Schneider, G. Crystal structure of aclacinomycin methylesterase with bound product analogues: implications for anthracycline recognition and mechanism. J.Biol.Chem. 2003 278 39006 39013 1Q0Z 12878604 Crystal structure of aclacinomycin methylesterase (RdmC) with bound product analogue, 10-decarboxymethylaclacinomycin A (DcmA) 2003-07-18 2003-11-25 Jansson, A.,Niemi, J.,Mantsala, P.,Schneider, G. Crystal structure of aclacinomycin methylesterase with bound product analogues: implications for anthracycline recognition and mechanism. J.Biol.Chem. 2003 278 39006 39013 1QZZ 14607118 Crystal structure of aclacinomycin-10-hydroxylase (RdmB) in complex with S-adenosyl-L-methionine (SAM) 2003-09-19 2003-11-25 Jansson, A.,Niemi, J.,Lindqvist, Y.,Mantsala, P.,Schneider, G. Crystal Structure of Aclacinomycin-10-Hydroxylase, a S-Adenosyl-L-Methionine-dependent Methyltransferase Homolog Involved in Anthracycline Biosynthesis in Streptomyces purpurascens. J.Mol.Biol. 2003 334 269 280 1P0V 14653735 F393A mutant heme domain of flavocytochrome P450 BM3 2003-04-11 2003-12-09 Ost, T.W.B.,Clark, J.,Mowat, C.G.,Miles, C.S.,Walkinshaw, M.D.,Reid, G.A.,Chapman, S.K.,Daff, S. Oxygen Activation and Electron Transfer in Flavocytochrome P450 BM3 J.Am.Chem.Soc. 2003 125 15010 15020 1QYN 14643199 Crystal Structure of SecB from Escherichia coli 2003-09-11 2003-12-09 Dekker, C.,de Kruijff, B.,Gros, P. Crystal structure of SecB from Escherichia coli J.Struct.Biol. 2003 144 313 319 1R3O 14684885 Crystal structure of the first RNA duplex in L-conformation at 1.9A resolution 2003-10-02 2003-12-23 Vallazza, M.,Perbandt, M.,Klussmann, S.,Rypniewski, W.,Einspahr, H.M.,Erdmann, V.A.,Betzel, C.h. First look at RNA in L-configuration. Acta Crystallogr.,Sect.D 2004 60 1 7 1O5X 14563846 Plasmodium falciparum TIM complexed to 2-phosphoglycerate 2003-10-06 2004-01-13 Parthasarathy, S.,Eaazhisai, K.,Balaram, H.,Balaram, P.,Murthy, M.R. Structure of Plasmodium falciparum Triose-phosphate Isomerase-2-Phosphoglycerate Complex at 1.1-A Resolution J.Biol.Chem. 2003 278 52461 52470 1R2M 14555650 Atomic resolution structure of the HFBII hydrophobin: a self-assembling amphiphile 2003-09-29 2004-01-13 Hakanpaa, J.,Paananen, A.,Askolin, S.,Nakari-Setala, T.,Parkkinen, T.,Penttila, M.,Linder, M.B.,Rouvinen, J. Atomic resolution structure of the HFBII hydrophobin, a self-assembling amphiphile. J.Biol.Chem. 2004 279 534 539 1OK0 14501112 Crystal Structure of Tendamistat 2003-07-16 2004-01-15 Koenig, V.,Vertesy, L.,Schneider, T.R. Crystal Structure of the Alpha-Amylase Inhibitor Tendamistat at 0.93 A Acta Crystallogr.,Sect.D 2003 59 1737 0 1PJH 14741345 Structural studies on delta3-delta2-enoyl-CoA isomerase: the variable mode of assembly of the trimeric disks of the crotonase superfamily 2003-06-03 2004-01-20 Mursula, A.M.,Hiltunen, J.K.,Wierenga, R.K. Structural studies on delta(3)-delta(2)-enoyl-CoA isomerase: the variable mode of assembly of the trimeric disks of the crotonase superfamily. Febs Lett. 2004 557 81 87 1NQU 12684006 Crystal Structure of Lumazine Synthase from Aquifex aeolicus in Complex with Inhibitor: 6,7-dioxo-5H-8-ribitylaminolumazine 2003-01-23 2004-01-23 Zhang, X.,Meining, W.,Cushman, M.,Haase, I.,Fischer, M.,Bacher, A.,Ladenstein, R. A structure-based model of the reaction catalyzed by lumazine synthase from Aquifex aeolicus. J.Mol.Biol. 2003 328 167 182 1NQV 12684006 Crystal Structure of Lumazine Synthase from Aquifex aeolicus in Complex with Inhibitor: 5-nitroso-6-ribityl-amino-2,4(1H,3H)pyrimidinedione 2003-01-23 2004-01-23 Zhang, X.,Meining, W.,Cushman, M.,Haase, I.,Fischer, M.,Bacher, A.,Ladenstein, R. A structure-based model of the reaction catalyzed by lumazine synthase from Aquifex aeolicus. J.Mol.Biol. 2003 328 167 182 1NQW 12684006 Crystal Structure of Lumazine Synthase from Aquifex aeolicus in Complex with Inhibitor: 5-(6-D-ribitylamino-2,4(1H,3H)pyrimidinedione-5-yl)-1-pentyl-phosphonic acid 2003-01-23 2004-01-23 Zhang, X.,Meining, W.,Cushman, M.,Haase, I.,Fischer, M.,Bacher, A.,Ladenstein, R. A structure-based model of the reaction catalyzed by lumazine synthase from Aquifex aeolicus. J.Mol.Biol. 2003 328 167 182 1NQX 12684006 Crystal Structure of Lumazine Synthase from Aquifex aeolicus in Complex with Inhibitor: 3-(7-hydroxy-8-ribityllumazine-6-yl)propionic acid 2003-01-23 2004-01-23 Zhang, X.,Meining, W.,Cushman, M.,Haase, I.,Fischer, M.,Bacher, A.,Ladenstein, R. A structure-based model of the reaction catalyzed by lumazine synthase from Aquifex aeolicus. J.Mol.Biol. 2003 328 167 182 1Q8S 14729339 Pterocarpus angolensis lectin (PAL) in complex with the dimannoside Man(alpha1-6)Man 2003-08-22 2004-02-10 Loris, R.,Van Walle, I.,De Greve, H.,Beeckmans, S.,Deboeck, F.,Wyns, L.,Bouckaert, J. Structural Basis of Oligomannose Recognition by the Pterocarpus angolensis Seed Lectin J.Mol.Biol. 2004 335 1227 1240 1S6B 15828003 X-ray Crystal Structure of a Complex Formed Between Two Homologous Isoforms of Phospholipase A2 from Naja naja sagittifera: Principle of Molecular Association and Inactivation 2004-01-23 2004-02-10 Jabeen, T.,Sharma, S.,Singh, N.,Singh, R.K.,Kaur, P.,Perbandt, M.,Betzel, C.h.,Srinivasan, A.,Singh, T.P. Crystal structure of a calcium-induced dimer of two isoforms of cobra phospholipase A2 at 1.6 A resolution. Proteins 2005 59 856 863 1UUE 14978284 a-SPECTRIN SH3 DOMAIN (V44T, D48G MUTANT) 2003-12-18 2004-02-19 Fernandez, A.,Vega, M.C.,Wilmanns, M.,Serrano, L. Solvation in Protein Folding Analysis: Combination of Theoretical and Experimental Approaches Proc.Natl.Acad.Sci.USA 2004 101 2834 0 1OVN 12941941 Crystal Structure and Functional Analysis of Drosophila Wind-- a PDI-Related Protein 2003-03-27 2004-02-24 Ma, Q.,Guo, C.,Barnewitz, K.,Sheldrick, G.M.,Soling, H.D.,Uson, I.,Ferrari, D.M. Crystal structure and functional analysis of Drosophila Wind, a protein-disulfide isomerase-related protein. J.Biol.Chem. 2003 278 44600 44607 1UUN 14976314 Main porin from Mycobacterium smegmatis (MspA) 2004-01-08 2004-02-26 Faller, M.,Niederweis, M.,Schulz, G.E. The Structure of a Mycobacterial Outer-Membrane Channel Science 2004 303 1189 0 1HKI 12639956 Crystal structure of human chitinase in complex with glucoallosamidin B 2003-03-10 2004-03-11 Rao, F.V.,Houston, D.R.,Boot, R.G.,Aerts, J.M.F.G.,Sakuda, S.,Van Aalten, D.M.F. Crystal Structures of Allosamidin Derivatives in Complex with Human Macrophage Chitinase J.Biol.Chem. 2003 278 20110 0 1HKJ 12639956 Crystal structure of human chitinase in complex with methylallosamidin 2003-03-10 2004-03-11 Rao, F.V.,Houston, D.R.,Boot, R.G.,Aerts, J.M.F.G.,Sakuda, S.,Van Aalten, D.M.F. Crystal Structures of Allosamidin Derivatives in Complex with Human Macrophage Chitinase J.Biol.Chem. 2003 278 20110 0 1HKN 12676958 A complex between acidic fibroblast growth factor and 5-amino-2-naphthalenesulfonate 2003-03-10 2004-03-11 Fernandez-Tornero, C.,Lozano, R.M.,Redondo-Horcajo, M.,Gomez, A.,Lopez, J.,Quesada, E.,Uriel, C.,Valverde, S.,Cuevas, P.,Romero, A.,Gimenez-Gallego, G. Leads for Development of New Naphthalenesulfonate Derivatives with Enhanced Antiangiogenic Activity: Crystal Structure of Acidic Fibroblast Growth Factor in Complex with 5-Amino-2-Naphthalenesulfonate J.Biol.Chem. 2003 278 21774 0 1UYO 15014442 Translocator domain of autotransporter NalP from Neisseria meningitidis 2004-03-02 2004-03-19 Oomen, C.J.,Van Ulsen, P.,Van Gelder, P.,Feijen, M.,Tommassen, J.,Gros, P. Structure of the Translocator Domain of a Bacterial Autotransporter Embo J. 2004 23 1257 0 1P9H 14765110 CRYSTAL STRUCTURE OF THE COLLAGEN-BINDING DOMAIN OF YERSINIA ADHESIN YadA 2003-05-12 2004-03-23 Nummelin, H.,Merckel, M.C.,Leo, J.C.,Lankinen, H.,Skurnik, M.,Goldman, A. The Yersinia adhesin YadA collagen-binding domain structure is a novel left-handed parallel beta-roll. Embo J. 2004 23 701 711 1OAE 16341897 Crystal structure of the reduced form of cytochrome c"" from Methylophilus methylotrophus 2003-01-09 2004-03-26 Enguita, F.J.,Pohl, E.,Turner, D.L.,Santos, H.,Carrondo, M.A. Structural Evidence for a Proton Transfer Pathway Coupled with Haem Reduction of Cytochrome C"" from Methylophilus Methylotrophus. J.Biol.Inorg.Chem. 2006 11 189 0 1HKH 15081810 unligated gamma lactamase from an Aureobacterium species 2003-03-10 2004-03-30 Line, K.,Isupov, M.N.,Littlechild, J.A. The crystal structure of a (-) gamma-lactamase from an Aureobacterium species reveals a tetrahedral intermediate in the active site. J. Mol. Biol. 2004 338 519 532 1HL7 15081810 Gamma lactamase from an Aureobacterium species in complex with 3a,4,7,7a-tetrahydro-benzo [1,3] dioxol-2-one 2003-03-14 2004-03-30 Line, K.,Isupov, M.N.,Littlechild, J.A. The Crystal Structure of a (-)Gamma-Lactamase from an Aureobacterium Species Reveals a Tetrahedral Intermediate in the Active Site J.Mol.Biol. 2004 338 519 0 1OII 15023059 Crystal structure of the alkylsulfatase AtsK, a non-heme Fe(II) alphaketoglutarate dependent Dioxygenase in complex with iron and alphaketoglutarate 2003-06-18 2004-03-30 Mueller, I.,Kahnert, A.,Pape, T.,Sheldrick, G.M.,Meyer-Klaucke, W.,Dierks, T.,Kertesz, M.A.,Uson, I. Crystal Structure of the Alkylsulfatase Atsk: Insights Into the Catalytic Mechanism of the Fe(II) Alpha-Ketoglutarate-Dependent Dioxygenase Superfamily Biochemistry 2004 42 3075 0 1OIJ 15023059 Crystal structure of the alkylsulfatase AtsK, a non-heme Fe(II) alphaketoglutarate dependent Dioxygenase in complex with alphaketoglutarate 2003-06-18 2004-03-30 Mueller, I.,Kahnert, A.,Pape, T.,Sheldrick, G.M.,Meyer-Klaucke, W.,Dierks, T.,Kertesz, M.A.,Uson, I. Crystal Structure of the Alkylsulfatase Atsk: Insights Into the Catalytic Mechanism of the Fe(II) Alpha-Ketoglutarate-Dependent Dioxygenase Superfamily Biochemistry 2004 42 3075 0 1OIK 15023059 Crystal structure of the alkylsulfatase AtsK, a non-heme Fe(II) alphaketoglutarate dependent Dioxygenase in complex with fe, alphaketoglutarate and 2-ethyl-1-hexanesulfuric acid 2003-06-18 2004-03-30 Mueller, I.,Kahnert, A.,Pape, T.,Sheldrick, G.M.,Meyer-Klaucke, W.,Dierks, T.,Kertesz, M.A.,Uson, I. Crystal Structure of the Alkylsulfatase Atsk: Insights Into the Catalytic Mechanism of the Fe(II) Alpha-Ketoglutarate-Dependent Dioxygenase Superfamily Biochemistry 2004 42 3075 0 1OF8 15019786 double complex of the tyrosine sensitive DAHP Synthase from S. cerevisiae with Co2+, PEP and the E4P analogoue G3P 2003-04-08 2004-04-08 Koenig, V.,Pfeil, A.,Braus, G.H.,Schneider, T.R. Substrate and Metal Complexes of 3-Deoxy-D-Arabino-Heptulosonate-7-Phosphate Synthase from Saccharomyces Cerevisiae Provide New Insights Into the Catalytic Mechanism J.Mol.Biol. 2004 337 675 0 1PT6 14660600 I domain from human integrin alpha1-beta1 2003-06-23 2004-04-13 Nymalm, Y.,Puranen, J.S.,Nyholm, T.K.M.,Kapyla, J.,Kidron, H.,Airenne, T.T.,Heino, J.,Slotte, J.P.,Johnson, M.S.,Salminen, T.A. Jararhagin-derived RKKH peptides induce structural changes in alpha1I domain of human integrin alpha1beta1. J.Biol.Chem. 2004 279 7962 7970 1SXK Crystal Structure of a complex formed between phospholipase A2 and a non-specific anti-inflammatory amino salicylic acid at 1.2 A resolution 2004-03-31 2004-04-13 Singh, N.,Bilgrami, S.,Kaur, P.,Sharma, S.,Singh, T.P. Crystal Structure of a complex formed between phospholipase A2 and a non-specific anti-inflammatory amino salicylic acid at 1.2 A resolution To be Published 0 0 0 0 1OFP 15019786 CRYSTAL STRUCTURE OF THE TYROSINE-REGULATED 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE FROM SACCHAROMYCES CEREVISIAE 2003-04-17 2004-04-15 Koenig, V.,Pfeil, A.,Braus, G.H.,Schneider, T.R. Substrate and Metal Complexes of 3-Deoxy-D-Arabino-Heptulosonate-7-Phosphate Synthase from Saccharomyces Cerevisiae Provide New Insights Into the Catalytic Mechanism J.Mol.Biol. 2004 337 675 0 1SZ8 Crystal Structure of an Acidic Phospholipase A2 from Naja Naja Sagittifera at 1.5 A resolution 2004-04-05 2004-04-20 Singh, R.K.,Sharma, S.,Jabeen, T.,Kaur, P.,Singh, T.P. Crystal Structure of an Acidic Phospholipase A2 from Naja Naja Sagittifera at 1.5 A Resolution To be Published 0 0 0 0 1P3C 15005613 Glutamyl endopeptidase from Bacillus intermedius 2003-04-17 2004-04-27 Meijers, R.,Blagova, E.V.,Levdikov, V.M.,Rudenskaya, G.N.,Chestukhina, G.G.,Akimkina, T.V.,Kostrov, S.V.,Lamzin, V.S.,Kuranova, I.P. The crystal structure of glutamyl endopeptidase from Bacillus intermedius reveals a structural link between zymogen activation and charge compensation. Biochemistry 2004 43 2784 2791 1P3E 15005613 Structure of Glu endopeptidase in complex with MPD 2003-04-17 2004-04-27 Meijers, R.,Blagova, E.V.,Levdikov, V.M.,Rudenskaya, G.N.,Chestukhina, G.G.,Akimkina, T.V.,Kostrov, S.V.,Lamzin, V.S.,Kuranova, I.P. The crystal structure of glutamyl endopeptidase from Bacillus intermedius reveals a structural link between zymogen activation and charge compensation. Biochemistry 2004 43 2784 2791 1SKG Structure-based rational drug design: Crystal structure of the complex formed between Phospholipase A2 and a pentapeptide Val-Ala-Phe-Arg-Ser 2004-03-04 2004-04-27 Ethayathulla, A.S.,Singh, N.,Sharma, S.,Makker, J.,Dey, S.,Perbandt, M.,Betzel, C.,Singh, T.P. Structure-based rational drug design: Crystal structure of the complex formed between Phospholipase A2 and a pentapeptide Val-Ala-Phe-Arg-Ser To be Published 0 0 0 0 1T2D 15117937 Plasmodium falciparum lactate dehydrogenase complexed with NAD+ and oxalate 2004-04-21 2004-05-11 Cameron, A.,Read, J.,Tranter, R.,Winter, V.J.,Sessions, R.B.,Brady, R.L.,Vivas, L.,Easton, A.,Kendrick, H.,Croft, S.L.,Barros, D.,Lavandera, J.L.,Martin, J.J.,Risco, F.,Garcia-Ochoa, S.,Gamo, F.J.,Sanz, L.,Leon, L.,Ruiz, J.R.,Gabarro, R.,Mallo, A.,De Las Heras, F.G. Identification and Activity of a Series of Azole-based Compounds with Lactate Dehydrogenase-directed Anti-malarial Activity. J.Biol.Chem. 2004 279 31429 31439 1OXG 15654893 Crystal structure of a complex formed between organic solvent treated bovine alpha-chymotrypsin and its autocatalytically produced highly potent 14-residue peptide at 2.2 resolution 2003-04-02 2004-05-18 Singh, N.,Jabeen, T.,Sharma, S.,Roy, I.,Gupta, M.N.,Bilgrami, S.,Somvanshi, R.K.,Dey, S.,Perbandt, M.,Betzel, C.,Srinivasan, A.,Singh, T.P. Detection of native peptides as potent inhibitors of enzymes. Crystal structure of the complex formed between treated bovine alpha-chymotrypsin and an autocatalytically produced fragment, IIe-Val-Asn-Gly-Glu-Glu-Ala-Val-Pro-Gly-Ser-Trp-Pro-Trp, at 2.2 angstroms resolution. Febs J. 2005 272 562 572 1P7V Structure of a complex formed between Proteinase K and a designed heptapeptide inhibitor Pro-Ala-Pro-Phe-Ala-Ala-Ala at atomic resolution 2003-05-06 2004-05-18 Bilgrami, S.,Kaur, P.,Chandra, V.,Banumathi, S.,Perbandt, M.,Betzel, C.,Singh, T.P. Structure of a complex formed between Proteinase K and a designed heptapeptide inhibitor Pro-Ala-Pro-Phe-Ala-Ala-Ala at atomic resolution To be published 0 0 0 0 1P7W Crystal structure of the complex of Proteinase K with a designed heptapeptide inhibitor Pro-Ala-Pro-Phe-Ala-Ser-Ala at atomic resolution 2003-05-06 2004-05-18 Bilgrami, S.,Perbandt, M.,Chandra, V.,Banumathi, S.,Kaur, P.,Betzel, C.,Singh, T.P. Crystal structure of the complex of Proteinase K with heptapeptide inhibitor Pro-Ala-Pro-Phe-Ala-Ser-Ala at atomic resolution To be published 0 0 0 0 1RSB 15065851 X-ray study of the DNA oligomer d(ATATAT) in P65 space group 2003-12-09 2004-05-25 Abrescia, N.G.,Gonzalez, C.,Gouyette, C.,Subirana, J.A. X-ray and NMR studies of the DNA oligomer d(ATATAT): Hoogsteen base pairing in duplex DNA. Biochemistry 2004 43 4092 4100 1SH6 15128297 Crystal structure of actin-binding domain of mouse plectin 2004-02-25 2004-05-25 Sevcik, J.,Urbanikova, L.,Kostan, J.,Janda, L.,Wiche, G. Actin-binding domain of mouse plectin: crystal structure and binding to vimentin Eur.J.Biochem. 2004 271 1873 1884 1PD5 Crystal structure of E.coli chloramphenicol acetyltransferase type I at 2.5 Angstrom resolution 2003-05-19 2004-06-01 Roidis, A.,Kokkinidis, M. Crystal structure of E.coli chloramphenicol acetyltransferase type I at 2.5 Angstrom resolution To be Published 0 0 0 0 1PFE 15805599 Echinomycin-(gcgtacgc)2 complex 2003-05-26 2004-06-08 Cuesta-Seijo, J.A.,Sheldrick, G.M. Structures of Complexes between Echinomycin and Duplex DNA. Acta Crystallogr.,Sect.D 2005 61 442 0 1PKV 12927541 The N-terminal domain of riboflavin synthase in complex with riboflavin 2003-06-06 2004-06-08 Meining, W.,Eberhardt, S.,Bacher, A.,Ladenstein, R. The structure of the N-terminal domain of riboflavin synthase in complex with riboflavin at 2.6A resolution. J.Mol.Biol. 2003 331 1053 1063 1TD7 16301791 Interactions of a specific non-steroidal anti-inflammatory drug (NSAID) with group I phospholipase A2 (PLA2): Crystal structure of the complex formed between PLA2 and niflumic acid at 2.5 A resolution 2004-05-21 2004-06-08 Jabeen, T.,Singh, N.,Singh, R.K.,Sharma, S.,Somvanshi, R.K.,Dey, S.,Singh, T.P. Non-steroidal anti-inflammatory drugs as potent inhibitors of phospholipase A2: structure of the complex of phospholipase A2 with niflumic acid at 2.5 Angstroms resolution. Acta Crystallogr.,Sect.D 2005 61 1579 1586 1TDV Non-specific binding to phospholipase A2:Crystal structure of the complex of PLA2 with a designed peptide Tyr-Trp-Ala-Ala-Ala-Ala at 1.7A resolution 2004-05-24 2004-06-08 Singh, N.,Jabeen, T.,Ethayathulla, A.S.,Somvanshi, R.K.,Sharma, S.,Dey, S.,Perbandt, M.,Betzel, C.,Singh, T.P. Non-specific binding to phospholipase A2:Crystal structure of the complex of PLA2 with a designed peptide Tyr-Trp-Ala-Ala-Ala-Ala at 1.7A resolution to be published 0 0 0 0 1TG1 Crystal Structure of the complex formed between russells viper phospholipase A2 and a designed peptide inhibitor PHQ-Leu-Val-Arg-Tyr at 1.2A resolution 2004-05-28 2004-06-08 Singh, N.,Kaur, P.,Somvanshi, R.K.,Sharma, S.,Dey, S.,Perbandt, M.,Betzel, C.,Singh, T.P. Crystal Structure of the complex formed between russells viper phospholipase A2 and a designed peptide inhibitor Cbz-dehydro-Leu-Val-Arg-Tyr at 1.2A resolution To be Published 0 0 0 0 1TG4 Design of specific inhibitors of groupII phospholipase A2(PLA2): Crystal structure of the complex formed between russells viper PLA2 and designed peptide Phe-Leu-Ala-Tyr-Lys at 1.7A resolution 2004-05-28 2004-06-08 Singh, N.,Somvanshi, R.K.,Sharma, S.,Dey, S.,Perbandt, M.,Betzel, C.,Ethayathulla, A.S.,Singh, T.P. Design of specific inhibitors of groupII phospholipase A2(PLA2): Crystal structure of the complex formed between russells viper PLA2 and designed peptide Phe-Leu-Ala-Tyr-Lys at 1.7A resolution TO BE PUBLISHED 0 0 0 0 1TJ9 Structure of the complexed formed between group II phospholipase A2 and a rationally designed tetra peptide,Val-Ala-Arg-Ser at 1.1A resolution 2004-06-03 2004-06-08 Singh, N.,Ethayathulla, A.S.,K Somvanshi, R.,Sharma, S.,Dey, S.,Perbandt, M.,Betzel, C.,Kaur, P.,Singh, T.P. Structure of the complex formed between group II phospholipase A2 and a rationally designed tetra peptide,Val-Ala-Arg-Ser at 1.1A resolution TO BE PUBLISHED 0 0 0 0 1T5T 15192230 Structure of the (SR)Ca2+-ATPase Ca2-E1-ADP:AlF4- form 2004-05-05 2004-06-15 Sorensen, T.L.,Moller, J.V.,Nissen, P. Phosphoryl transfer and calcium ion occlusion in the calcium pump. Science 2004 304 1672 1675 1TEJ 16101289 Crystal structure of a disintegrin heterodimer at 1.9 A resolution. 2004-05-25 2004-06-15 Bilgrami, S.,Yadav, S.,Kaur, P.,Sharma, S.,Perbandt, M.,Betzel, C.,Singh, T.P. Crystal Structure of the Disintegrin Heterodimer from Saw-Scaled Viper (Echis carinatus) at 1.9 A Resolution Biochemistry 2005 44 11058 11066 1TH6 Crystal structure of phospholipase A2 in complex with atropine at 1.23A resolution 2004-06-01 2004-06-15 Singh, N.,Pal, A.,Jabeen, T.,Sharma, S.,Perbandt, M.,Betzel, C.,Singh, T.P. Crystal structure of phospholipase A2 in complex with atropine at 1.23A resolution To be Published 0 0 0 0 1TJK Crystal structure of the complex formed between group II phospholipase A2 with a designed pentapeptide, Phe- Leu- Ser- Thr- Lys at 1.2 A resolution 2004-06-06 2004-06-15 Singh, N.,Jabeen, T.,Somvanshi, R.K.,Sharma, S.,Perbandt, M.,Dey, S.,Betzel, C.,Singh, T.P. Crystal structure of the complex formed between group II phospholipase A2 with a designed pentapeptide, Phe - Leu - Ser - Thr - Lys at 1.2 A resolution To be Published 0 0 0 0 1TK2 Crystal Structure of the Complex formed between Alkaline Proteinase Savinase and Gramicidin S at 1.5A Resolution 2004-06-08 2004-06-22 Bhatt, V.S.,Kaur, P.,Klupsch, S.,Betzel, C.,Brenner, S.,Singh, T.P. Crystal Structure of the Complex Formed between Alkaline Proteinase Savinase and Gramicidin S at 1.5A Resolution. To be Published 0 0 0 0 1TK4 Crystal structure of russells viper phospholipase A2 in complex with a specifically designed tetrapeptide Ala-Ile-Arg-Ser at 1.1 A resolution 2004-06-08 2004-06-22 Singh, N.,Bilgrami, S.,Somvanshi, R.K.,Sharma, S.,Dey, S.,Perbandt, M.,Betzel, C.,Kaur, P.,Singh, T.P. Crystal structure of russells viper phospholipase A2 with a specifically designed tetrapeptide Ala-Ile-Arg-Ser at 1.1 A resolution TO BE PUBLISHED 0 0 0 0 1PUM 16508080 Mistletoe lectin I in complex with galactose 2003-06-25 2004-06-25 Mikeska, R.,Wacker, R.,Arni, R.,Singh, T.P.,Mikhailov, A.,Gabdoulkhakov, A.,Voelter, W.,Betzel, C. Mistletoe lectin I in complex with galactose and lactose reveals distinct sugar-binding properties Acta Crystallogr.,Sect.F 2005 61 17 25 1PUU 16508080 Mistletoe lectin I in complex with lactose 2003-06-25 2004-06-25 Mikeska, R.,Wacker, R.,Arni, R.,Singh, T.P.,Mikhailov, A.,Gabdoulkhakov, A.,Voelter, W.,Betzel, C. Mistletoe lectin I in complex with galactose and lactose reveals distinct sugar-binding properties Acta Crystallogr.,Sect.F 2005 61 17 25 1SC9 14998991 Hydroxynitrile Lyase from Hevea brasiliensis in complex with the natural substrate acetone cyanohydrin 2004-02-12 2004-06-29 Gruber, K.,Gartler, G.,Krammer, B.,Schwab, H.,Kratky, C. Reaction mechanism of hydroxynitrile lyases of the alpha/beta-hydrolase superfamily: the three-dimensional structure of the transient enzyme-substrate complex certifies the crucial role of LYS236 J.Biol.Chem. 2004 279 20501 20510 1UA5 16522189 Non-fusion GST from S. japonicum in complex with glutathione 2003-02-28 2004-06-29 Kursula, I.,Heape, A.M.,Kursula, P. Crystal structure of non-fused glutathione S-transferase from Schistosoma japonicum in complex with glutathione. Protein Pept.Lett. 2005 12 709 712 1PHQ Crystal structure of KDO8P synthase in its binary complex with substrate analog E-FPEP 2003-05-29 2004-07-13 Vainer, R.,Adir, N.,Baasov, T.,Belakhov, V.,Rabkin, E. Crystallographic Analysis of the Phosphoenol Pyruvate Binding Site in E. Coli KDO8P Synthase To be Published 0 0 0 0 1PHW 16023668 Crystal structure of KDO8P synthase in its binary complex with substrate analog 1-deoxy-A5P 2003-05-29 2004-07-13 Vainer, R.,Belakhov, V.,Rabkin, E.,Baasov, T.,Adir, N. Crystal structures of Escherichia coli KDO8P synthase complexes reveal the source of catalytic irreversibility. J.Mol.Biol. 2005 351 641 652 1TFM CRYSTAL STRUCTURE OF A RIBOSOME INACTIVATING PROTEIN IN ITS NATURALLY INHIBITED FORM 2004-05-27 2004-07-13 Mishra, V.,Bilgrami, S.,Paramasivam, M.,Yadav, S.,Sharma, R.S.,Kaur, P.,Srinivasan, A.,Babu, C.R.,Singh, T.P. CRYSTAL STRUCTURE OF A RIBOSOME INACTIVATING PROTEIN IN ITS NATURALLY INHIBITED FORM To be Published 0 0 0 0 1Q23 Crystal structure of Chloramphenicol acetyltransferase I complexed with Fusidic acid at 2.18 A resolution 2003-07-23 2004-08-03 Roidis, A.,Kokkinidis, M. Crystal structure of Chloramphenicol acetyltransferase I in the apoenzyme form and complexed with fusidic acid at 2.18 A resolution To be Published 0 0 0 0 1SN0 15082720 Crystal Structure Of Sea Bream Transthyretin in complex with thyroxine At 1.9A Resolution 2004-03-10 2004-08-03 Eneqvist, T.,Lundberg, E.,Karlsson, A.,Huang, S.,Santos, C.R.,Power, D.M.,Sauer-Eriksson, A.E. High resolution crystal structures of piscine transthyretin reveal different binding modes for triiodothyronine and thyroxine. J.Biol.Chem. 2004 279 26411 26416 1SN2 15082720 Crystal Structure of Sea Bream Transthyretin at 1.90A Resolution 2004-03-10 2004-08-03 Eneqvist, T.,Lundberg, E.,Karlsson, A.,Huang, S.,Santos, C.R.,Power, D.M.,Sauer-Eriksson, A.E. High resolution crystal structures of piscine transthyretin reveal different binding modes for triiodothyronine and thyroxine. J.Biol.Chem. 2004 279 26411 26416 1SN5 15082720 Crystal Structure of Sea Bream Transthyretin in complex with Triiodothyronine at 1.90A Resolution 2004-03-10 2004-08-03 Eneqvist, T.,Lundberg, E.,Karlsson, A.,Huang, S.,Santos, C.R.,Power, D.M.,Sauer-Eriksson, A.E. High resolution crystal structures of piscine transthyretin reveal different binding modes for triiodothyronine and thyroxine. J.Biol.Chem. 2004 279 26411 26416 1VGQ 15213226 Formyl-CoA transferase mutant Asp169 to Ala 2004-04-28 2004-08-03 Jonsson, S.,Ricagno, S.,Lindqvist, Y.,Richards, N.G. Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes J.Biol.Chem. 2004 279 36003 36012 1VGR 15213226 Formyl-CoA transferase mutant Asp169 to Glu 2004-04-28 2004-08-03 Jonsson, S.,Ricagno, S.,Lindqvist, Y.,Richards, N.G. Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes J.Biol.Chem. 2004 279 36003 36012 1U4J 15721580 Crystal structure of a carbohydrate induced dimer of group I phospholipase A2 from Bungarus caeruleus at 2.1 A resolution 2004-07-26 2004-08-10 Singh, G.,Gourinath, S.,Sarvanan, K.,Sharma, S.,Bhanumathi, S.,Betzel, C.,Yadav, S.,Srinivasan, A.,Singh, T.P. Crystal structure of a carbohydrate induced homodimer of phospholipase A(2) from Bungarus caeruleus at 2.1A resolution J.Struct.Biol. 2005 149 264 272 1SPQ 15166315 Understanding protein lids: Structural analysis of active hinge mutants in triosephosphate isomerase 2004-03-17 2004-08-24 Kursula, I.,Salin, M.,Sun, J.,Norledge, B.V.,Haapalainen, A.M.,Sampson, N.S.,Wierenga, R.K. Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase Protein Eng.Des.Sel. 2004 17 375 382 1SQ7 15166315 Understanding protein lids: Structural analysis of active hinge mutants in triosephosphate isomerase 2004-03-18 2004-08-24 Kursula, I.,Salin, M.,Sun, J.,Norledge, B.V.,Haapalainen, A.M.,Sampson, N.S.,Wierenga, R.K. Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase Protein Eng.Des.Sel. 2004 17 375 382 1SSD 15166315 Understanding protein lids: Structural analysis of active hinge mutants in triosephosphate isomerase 2004-03-24 2004-08-24 Kursula, I.,Salin, M.,Sun, J.,Norledge, B.V.,Haapalainen, A.M.,Sampson, N.S.,Wierenga, R.K. Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase Protein Eng.Des.Sel. 2004 17 375 382 1SU5 15166315 Understanding protein lids: Structural analysis of active hinge mutants in triosephosphate isomerase 2004-03-26 2004-08-24 Kursula, I.,Salin, M.,Sun, J.,Norledge, B.V.,Haapalainen, A.M.,Sampson, N.S.,Wierenga, R.K. Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase Protein Eng.Des.Sel. 2004 17 375 382 1RN8 15208312 Crystal structure of dUTPase complexed with substrate analogue imido-dUTP 2003-12-01 2004-09-07 Barabas, O.,Pongracz, V.,Kovari, J.,Wilmanns, M.,Vertessy, B.G. Structural Insights into the Catalytic Mechanism of Phosphate Ester Hydrolysis by dUTPase. J.Biol.Chem. 2004 279 42907 42915 1SEH 15208312 Crystal structure of E. coli dUTPase complexed with the product dUMP 2004-02-17 2004-09-07 Barabas, O.,Pongracz, V.,Kovari, J.,Wilmanns, M.,Vertessy, B.G. Structural Insights into the Catalytic Mechanism of Phosphate Ester Hydrolysis by dUTPase J.Biol.Chem. 2004 279 42907 42915 1SUG 15333922 1.95 A structure of apo protein tyrosine phosphatase 1B 2004-03-26 2004-09-07 Pedersen, A.K.,Peters G, G.H.,Moller, K.B.,Iversen, L.F.,Kastrup, J.S. Water-molecule network and active-site flexibility of apo protein tyrosine phosphatase 1B. Acta Crystallogr.,Sect.D 2004 60 1527 1534 1W0M 15342242 Triosephosphate isomerase from Thermoproteus tenax 2004-06-08 2004-09-09 Walden, H.,Taylor, G.,Lorentzen, E.,Pohl, E.,Lilie, H.,Schramm, A.,Knura, T.,Stubbe, K.,Tjaden, B.,Hensel, R. Structure and Function of a Regulated Archaeal Triosephosphate Isomerase Adapted to High Temperature J.Mol.Biol. 2004 342 861 0 1S8N 15341725 Crystal structure of Rv1626 from Mycobacterium tuberculosis 2004-02-03 2004-09-21 Morth, J.P.,Feng, V.,Perry, L.J.,Svergun, D.I.,Tucker, P.A. The Crystal and Solution Structure of a Putative Transcriptional Antiterminator from Mycobacterium tuberculosis. Structure 2004 12 1595 1605 1UNM 15805595 Crystal structure of 7-Aminoactinomycin D with non-complementary DNA 2003-09-11 2004-09-24 Alexopoulos, E.C.,Jares-Erijman, E.A.,Jovin, T.M.,Klement, R.,Machinek, R.,Sheldrick, G.M.,Uson, I. Crystal and Solution Structures of 7-Amino-Actinomycin D Complexes with D(Ttagbrut), D(Ttagtt) and D(Tttagttt) Acta Crystallogr.,Sect.D 2005 61 407 0 1T6E 15166216 Crystal Structure of the Triticum aestivum xylanase inhibitor I 2004-05-06 2004-09-28 Sansen, S.,De Ranter, C.J.,Gebruers, K.,Brijs, K.,Courtin, C.M.,Delcour, J.A.,Rabijns, A. Structural basis for inhibition of Aspergillus niger xylanase by triticum aestivum xylanase inhibitor-I J.Biol.Chem. 2004 279 36022 36028 1XFF Glutaminase domain of glucosamine 6-phosphate synthase complexed with glutamate 2004-09-14 2004-09-28 Isupov, M.N.,Obmolova, G.,Butterworth, S.,Badet-Denisot, M.-A.,Badet, B.,Polikarpov, I.,Littlechild, J.A.,Teplyakov, A. Substrate Binding is Required for Assembly of the Active Conformation of the Catalytic Site in Ntn Amidotransferases: Evidence from the 1.8 Angstrom Crystal Structure of the Glutaminase Domain of Glucosamine 6-Phosphate Synthase Structure 1996 4 801 810 1XFG Glutaminase domain of glucosamine 6-phosphate synthase complexed with l-glu hydroxamate 2004-09-14 2004-09-28 Isupov, M.N.,Obmolova, G.,Butterworth, S.,Badet-Denisot, M.-A.,Badet, B.,Polikarpov, I.,Littlechild, J.A.,Teplyakov, A. Substrate Binding is Required for Assembly of the Active Conformation of the Catalytic Site in Ntn Amidotransferases: Evidence from the 1.8 Angstrom Crystal Structure of the Glutaminase Domain of Glucosamine 6-Phosphate Synthase Structure 1996 4 801 810 1TJD 15388920 The crystal structure of the reduced disulphide bond isomerase, DsbC, from Escherichia coli 2004-06-04 2004-10-05 Banaszak, K.,Mechin, I.,Frost, G.,Rypniewski, W. Structure of the reduced disulfide-bond isomerase DsbC from Escherichia coli. Acta Crystallogr.,Sect.D 2004 60 1747 1752 1W6N 15476813 X-RAY CRYSTAL STRUCTURE OF C2S HUMAN GALECTIN-1 2004-08-19 2004-10-20 Lopez-Lucendo, M.I.F.,Solis, D.,Andre, S.,Hirabayashi, J.,Kasai, K.,Kaltner, H.,Gabius, H.J.,Romero, A. Growth-Regulatory Human Galectin-1: Crystallographic Characterisation of the Structural Changes Induced by Single-Site Mutations and Their Impact on the Thermodynamics of Ligand Binding J.Mol.Biol. 2004 343 957 0 1W6O 15476813 X-RAY CRYSTAL STRUCTURE OF C2S HUMAN GALECTIN-1 COMPLEXED WITH LACTOSE 2004-08-20 2004-10-20 Lopez-Lucendo, M.I.F.,Solis, D.,Andre, S.,Hirabayashi, J.,Kasai, K.,Kaltner, H.,Gabius, H.J.,Romero, A. Growth-Regulatory Human Galectin-1: Crystallographic Characterisation of the Structural Changes Induced by Single-Site Mutations and Their Impact on the Thermodynamics of Ligand Binding J.Mol.Biol. 2004 343 957 0 1W6P 15476813 X-RAY CRYSTAL STRUCTURE OF C2S HUMAN GALECTIN-1 COMPLEXED WITH N- Acetyl-LACTOSAMINE 2004-08-20 2004-10-20 Lopez-Lucendo, M.I.F.,Solis, D.,Andre, S.,Hirabayashi, J.,Kasai, K.,Kaltner, H.,Gabius, H.J.,Romero, A. Growth-Regulatory Human Galectin-1: Crystallographic Characterisation of the Structural Changes Induced by Single-Site Mutations and Their Impact on the Thermodynamics of Ligand Binding J.Mol.Biol. 2004 343 957 0 1W6Q 15476813 X-RAY CRYSTAL STRUCTURE OF R111H HUMAN GALECTIN-1 2004-08-21 2004-10-20 Lopez-Lucendo, M.I.F.,Solis, D.,Andre, S.,Hirabayashi, J.,Kasai, K.,Kaltner, H.,Gabius, H.J.,Romero, A. Growth-Regulatory Human Galectin-1: Crystallographic Characterisation of the Structural Changes Induced by Single-Site Mutations and Their Impact on the Thermodynamics of Ligand Binding J.Mol.Biol. 2004 343 957 0 1R4B ADP-ribosyltransferase C3bot2 from Clostridium botulinum, monoclinic form 2003-10-04 2004-11-16 Teplyakov, A.,Obmolova, G.,Gilliland, G.L.,Narumiya, S. Crystal Structure of ADP-RIBOSYLTRANSFERASE C3bot2 from CLOSTRIDIUM BOTULINUM To be Published 0 0 0 0 1WPM 15533045 Structure of Bacillus subtilis inorganic pyrophosphatase 2004-09-09 2004-11-23 Fabrichniy, I.P.,Lehtio, L.,Salminen, A.,Zyryanov, A.B.,Baykov, A.A.,Lahti, R.,Goldman, A. Structural Studies of Metal Ions in Family II Pyrophosphatases: The Requirement for a Janus Ion Biochemistry 2004 43 14403 14411 1XA5 15596444 Structure of Calmodulin in complex with KAR-2, a bis-indol alkaloid 2004-08-25 2004-12-21 Horvath, I.,Harmat, V.,Perczel, A.,Palfi, V.,Nyitrai, L.,Nagy, A.,Hlavanda, E.,Naray-Szabo, G.,Ovadi, J. The structure of the complex of calmodulin with KAR-2: a novel mode of binding explains the unique pharmacology of the drug J.Biol.Chem. 2005 280 8266 8274 1W3U 15608117 Crystal structure of phosphoserine aminotransferase from Bacillus circulans var. alkalophilus 2004-07-20 2004-12-22 Dubnovitsky, A.P.,Kapetaniou, E.G.,Papageorgiou, A.C. Enzyme Adaptation to Alkaline Ph: Atomic Resolution (1.08 A) Structure of Phosphoserine Aminotransferase from Bacillus Alcalophilus Protein Sci. 2005 14 97 0 1X90 15528298 Crystal structure of mutant form B of a pectin methylesterase inhibitor from Arabidopsis 2004-08-19 2004-12-28 Hothorn, M.,Wolf, S.,Aloy, P.,Greiner, S.,Scheffzek, K. Structural insights into the target specificity of plant invertase and pectin methylesterase inhibitory proteins Plant Cell 2004 16 3437 3447 1W17 15251431 Structure of Bacillus subtilis PdaA, a family 4 Carbohydrate esterase. 2004-06-17 2005-01-10 Blair, D.E.,van Aalten, D.M. Structures of Bacillus subtilis PdaA, a family 4 carbohydrate esterase, and a complex with N-acetyl-glucosamine. FEBS Lett. 2004 570 13 19 1S1A Pterocarpus angolensis seed lectin (PAL) with one binding site free and one binding site containing the disaccharide Man(a1-3)ManMe 2004-01-06 2005-01-18 0 0 0 0 1X74 15632186 Alpha-methylacyl-CoA racemase from Mycobacterium tuberculosis- mutational and structural characterization of the fold and active site 2004-08-13 2005-01-18 Savolainen, K.,Bhaumik, P.,Schmitz, W.,Kotti, T.J.,Conzelmann, E.,Wierenga, R.K.,Hiltunen, J.K. {alpha}-Methylacyl-CoA Racemase from Mycobacterium tuberculosis: MUTATIONAL AND STRUCTURAL CHARACTERIZATION OF THE ACTIVE SITE AND THE FOLD J.Biol.Chem. 2005 280 12611 12620 1VZW 15654319 Crystal structure of the bifunctional protein Pria 2004-05-27 2005-01-19 Kuper, J.,Doenges, C.,Wilmanns, M. Two-Fold Repeated (Beta-Alpha)(4) Half-Barrels May Provide a Molecular Tool for Dual Substrate Specificity Embo Rep. 2005 6 134 0 1WAW 15664516 Specificity and affinity of natural product cyclopentapeptide inhibitor Argadin against human chitinase 2004-10-28 2005-01-28 Rao, F.V.,Houston, D.R.,Boot, R.G.,Aerts, J.M.F.G.,Hodkinson, M.,Adams, D.J.,Shiomi, K.,Omura, S.,Van Aalten, D.M.F. Specificity and Affinity of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human and Bacterial Chitinases Chem.Biol. 2005 12 65 0 1YCJ 15710405 Crystal structure of the kainate receptor GluR5 ligand-binding core in complex with (S)-glutamate 2004-12-22 2005-02-01 Naur, P.,Vestergaard, B.,Skov, L.K.,Egebjerg, J.,Gajhede, M.,Kastrup, J.S. Crystal structure of the kainate receptor GluR5 ligand-binding core in complex with (S)-glutamate Febs Lett. 2005 579 1154 1160 1S9C 15644212 Crystal structure analysis of the 2-enoyl-CoA hydratase 2 domain of human peroxisomal multifunctional enzyme type 2 2004-02-04 2005-02-15 Koski, M.K.,Haapalainen, A.M.,Hiltunen, J.K. Crystal structure of 2-enoyl-CoA hydratase 2 from human peroxisomal multifunctional enzyme type 2. J.Mol.Biol. 2005 345 1157 1169 1SBY Alcohol dehydrogenase from Drosophila lebanonensis complexed with NAD+ and 2,2,2-trifluoroethanol at 1.1 A resolution 2004-02-11 2005-02-22 Benach, J.,Meijers, R.,Atrian, S.,Gonzalez-Duarte, R.,Lamzin, V.S.,Ladenstein, R. 1.1-A crystal structure of D. lebanonensis ADH complexed with NAD+ and 2,2,2-trifluoroethanol To be Published 0 0 0 0 1RUW Crystal structure of the SH3 domain from S. cerevisiae Myo3 2003-12-12 2005-03-01 Kursula, P.,Kursula, I.,Lehmann, F.,Song, Y.H.,Wilmanns, M. Crystal structure of the SH3 domain from S. cerevisiae Myo3 To be Published 0 0 0 0 1ST8 15659099 Crystal structure of fructan 1-exohydrolase IIa from Cichorium intybus 2004-03-25 2005-03-01 Verhaest, M.,van den Ende, W.,Roy, K.L.,De Ranter, C.J.,van Laere, A.,Rabijns, A. X-ray diffraction structure of a plant glycosyl hydrolase family 32 protein: fructan 1-exohydrolase IIa of Cichorium intybus. Plant J. 2005 41 400 411 1WL4 15733928 Human cytosolic acetoacetyl-CoA thiolase complexed with CoA 2004-06-20 2005-03-01 Kursula, P.,Sikkila, H.,Fukao, T.,Kondo, N.,Wierenga, R.K. High Resolution Crystal Structures of Human Cytosolic Thiolase (CT): A Comparison of the Active Sites of Human CT, Bacterial Thiolase, and Bacterial KAS I J.Mol.Biol. 2005 347 189 201 1YF8 15774467 Crystal structure of Himalayan mistletoe RIP reveals the presence of a natural inhibitor and a new functionally active sugar-binding site 2004-12-31 2005-03-08 Mishra, V.,Bilgrami, S.,Sharma, R.S.,Kaur, P.,Yadav, S.,Krauspenhaar, R.,Betzel, C.,Voelter, W.,Babu, C.R.,Singh, T.P. Crystal structure of himalayan mistletoe ribosome-inactivating protein reveals the presence of a natural inhibitor and a new functionally active sugar-binding site. J.Biol.Chem. 2005 280 20712 20721 1SYH 15591246 X-RAY STRUCTURE OF THE GLUR2 LIGAND-BINDING CORE (S1S2J) IN COMPLEX WITH (S)-CPW399 AT 1.85 A RESOLUTION. 2004-04-01 2005-03-22 Frandsen, A.,Pickering, D.S.,Vestergaard, B.,Kasper, C.,Nielsen, B.B.,Greenwood, J.R.,Campiani, G.,Fattorusso, C.,Gajhede, M.,Schousboe, A.,Kastrup, J.S. Tyr702 Is an Important Determinant of Agonist Binding and Domain Closure of the Ligand-Binding Core of GluR2. Mol.Pharmacol. 2005 67 703 713 1SYI 15591246 X-RAY STRUCTURE OF THE Y702F MUTANT OF THE GLUR2 LIGAND-BINDING CORE (S1S2J) IN COMPLEX WITH (S)-CPW399 AT 2.1 A RESOLUTION. 2004-04-01 2005-03-22 Frandsen, A.,Pickering, D.S.,Vestergaard, B.,Kasper, C.,Nielsen, B.B.,Greenwood, J.R.,Campiani, G.,Fattorusso, C.,Gajhede, M.,Schousboe, A.,Kastrup, J.S. Tyr702 Is an Important Determinant of Agonist Binding and Domain Closure of the Ligand-Binding Core of GluR2. Mol.Pharmacol. 2005 67 703 713 1TMX 15772073 Crystal structure of hydroxyquinol 1,2-dioxygenase from Nocardioides Simplex 3E 2004-06-11 2005-03-22 Ferraroni, M.,Seifert, J.,Travkin, V.M.,Thiel, M.,Kaschabek, S.,Scozzafava, A.,Golovleva, L.,Schlomann, M.,Briganti, F. Crystal structure of the hydroxyquinol 1,2-dioxygenase from Nocardioides simplex 3E, a key enzyme involved in polychlorinated aromatics biodegradation. J.Biol.Chem. 2005 280 21144 21154 1XHY 15591246 X-ray structure of the Y702F mutant of the GluR2 ligand-binding core (S1S2J) in complex with kainate at 1.85 A resolution 2004-09-21 2005-03-22 Frandsen, A.,Pickering, D.S.,Vestergaard, B.,Kasper, C.,Nielsen, B.B.,Greenwood, J.R.,Campiani, G.,Fattorusso, C.,Gajhede, M.,Schousboe, A.,Kastrup, J.S. Tyr702 Is an Important Determinant of Agonist Binding and Domain Closure of the Ligand-Binding Core of GluR2. Mol.Pharmacol. 2005 67 703 713 1YQU 15808857 Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene 2005-02-02 2005-04-19 Dandanell, G.,Szczepanowski, R.H.,Kierdaszuk, B.,Shugar, D.,Bochtler, M. Escherichia coli purine nucleoside phosphorylase II, the product of the xapA gene J.Mol.Biol. 2005 348 113 125 1WVJ 15794751 Exploring the GluR2 ligand-binding core in complex with the bicyclic AMPA analogue (S)-4-AHCP 2004-12-15 2005-04-26 Nielsen, B.B.,Pickering, D.S.,Greenwood, J.R.,Brehm, L.,Gajhede, M.,Schousboe, A.,Kastrup, J.S. Exploring the GluR2 ligand-binding core in complex with the bicyclical AMPA analogue (S)-4-AHCP FEBS J. 2005 272 1639 1648 1PU4 16046623 Crystal structure of human vascular adhesion protein-1 2003-06-24 2005-05-03 Airenne, T.T.,Nymalm, Y.,Kidron, H.,Smith, D.J.,Pihlavisto, M.,Salmi, M.,Jalkanen, S.,Johnson, M.S.,Salminen, T.A. Crystal structure of the human vascular adhesion protein-1: unique structural features with functional implications. Protein Sci. 2005 14 1964 1974 1Y75 16287060 A new form of catalytically inactive phospholipase A2 with an unusual disulphide bridge Cys 32- Cys 49 reveals recognition for N-acetylglucosmine 2004-12-08 2005-05-03 Jabeen, T.,Singh, N.,Singh, R.K.,Jasti, J.,Sharma, S.,Kaur, P.,Srinivasan, A.,Singh, T.P. Crystal structure of a heterodimer of phospholipase A2 from Naja naja sagittifera at 2.3 A resolution reveals the presence of a new PLA2-like protein with a novel cys 32-Cys 49 disulphide bridge with a bound sugar at the substrate-binding site Proteins 2006 62 329 337 1VA7 Yeast Myo3 SH3 domain, triclinic crystal form 2004-02-12 2005-06-14 Kursula, P.,Lehmann, F.,Song, Y.H.,Wilmanns, M. High-throughput structural genomics of yeast SH3 domains To be Published 0 0 0 0 1YC7 15913651 cAbAn33 VHH fragment against VSG 2004-12-22 2005-06-14 Conrath, K.,Vincke, C.,Stijlemans, B.,Schymkowitz, J.,Decanniere, K.,Wyns, L.,Muyldermans, S.,Loris, R. Antigen Binding and Solubility Effects upon the Veneering of a Camel VHH in Framework-2 to Mimic a VH. J.Mol.Biol. 2005 350 112 125 1YZZ 15913651 Humanized caban33 at room temperature 2005-03-01 2005-06-14 Conrath, K.,Vincke, C.,Stijlemans, B.,Schymkowitz, J.,Decanniere, K.,Wyns, L.,Muyldermans, S.,Loris, R. Antigen binding and solubility effects upon the veneering of a camel VHH in framework-2 to mimic a VH. J.Mol.Biol. 2005 350 112 125 2A1T 15975918 Structure of the human MCAD:ETF E165betaA complex 2005-06-21 2005-07-05 Toogood, H.S.,van Thiel, A.,Scrutton, N.S.,Leys, D. Stabilization of Non-productive Conformations Underpins Rapid Electron Transfer to Electron-transferring Flavoprotein J.Biol.Chem. 2005 280 30361 30366 2A1U 15975918 Crystal structure of the human ETF E165betaA mutant 2005-06-21 2005-07-05 Toogood, H.S.,van Thiel, A.,Scrutton, N.S.,Leys, D. Stabilization of Non-productive Conformations Underpins Rapid Electron Transfer to Electron-transferring Flavoprotein J.Biol.Chem. 2005 280 30361 30366 1YSR Crystal Structure of ATP binding domain of PrrB from Mycobacterium Tuberculosis 2005-02-09 2005-07-12 Nowak, E.,Panjikar, S.,Tucker, P. Crystal Structure of ATP binding domain of PrrB from Mycobacterium Tuberculosis To be published 0 0 0 0 1XCS 15926069 structure of oligonucleotide/drug complex 2004-09-03 2005-07-19 Valls, N.,Steiner, R.A.,Wright, G.,Murshudov, G.N.,Subirana, J.A. Variable role of ions in two drug intercalation complexes of DNA J.Biol.Inorg.Chem. 2005 10 476 482 1Z4J 16004879 Structure of the D41N variant of the human mitochondrial deoxyribonucleotidase in complex with uridine 2'-monophosphate 2005-03-16 2005-07-26 Wallden, K.,Ruzzenente, B.,Rinaldo-Matthis, A.,Bianchi, V.,Nordlund, P. Structural basis for substrate specificity of the human mitochondrial deoxyribonucleotidase STRUCTURE 2005 13 1081 1088 1Z4L 16004879 Structure of the D41N variant of the human mitochondrial deoxyribonucleotidase in complex with thymidine 5'-monophosphate 2005-03-16 2005-07-26 Wallden, K.,Ruzzenente, B.,Rinaldo-Matthis, A.,Bianchi, V.,Nordlund, P. Structural basis for substrate specificity of the human mitochondrial deoxyribonucleotidase STRUCTURE 2005 13 1081 1088 1Z4M 16004879 Structure of the D41N variant of the human mitochondrial deoxyribonucleotidase in complex with uridine 5'-monophosphate 2005-03-16 2005-07-26 Wallden, K.,Ruzzenente, B.,Rinaldo-Matthis, A.,Bianchi, V.,Nordlund, P. Structural basis for substrate specificity of the human mitochondrial deoxyribonucleotidase STRUCTURE 2005 13 1081 1088 1Z4Q 16004879 Structure of the D41N variant of the human mitochondrial deoxyribonucleotidase in complex with 2',3'-dideoxy-2',3-didehydrothymidine 5'-monophosphate (d4T-MP) 2005-03-16 2005-07-26 Wallden, K.,Ruzzenente, B.,Rinaldo-Matthis, A.,Bianchi, V.,Nordlund, P. Structural basis for substrate specificity of the human mitochondrial deoxyribonucleotidase STRUCTURE 2005 13 1081 1088 1Z6D 16045769 Ribonuclease A- IMP complex 2005-03-22 2005-08-16 Hatzopoulos, G.N.,Leonidas, D.D.,Kardakaris, R.,Kobe, J.,Oikonomakos, N.G. The binding of IMP to Ribonuclease A Febs J. 2005 272 3988 4001 1Z6S 16045769 Ribonuclease A- AMP complex 2005-03-23 2005-08-16 Hatzopoulos, G.N.,Leonidas, D.D.,Kardakaris, R.,Kobe, J.,Oikonomakos, N.G. The binding of IMP to Ribonuclease A Febs J. 2005 272 3988 4001 2BS8 16041081 Crystal structure of F17b-G in complex with N-acetyl-D-glucosamine 2005-05-18 2005-08-19 Buts, L.,Wellens, A.,Van Molle, I.,Wyns, L.,Loris, R.,Lahmann, M.,Oscarson, S.,De Greve, H.,Bouckaert, J. Impact of Natural Variation in Bacterial F17G Adhesins on Crystallization Behaviour. Acta Crystallogr.,Sect.D 2005 61 1149 0 1WLE 16163389 Crystal Structure of mammalian mitochondrial seryl-tRNA synthetase complexed with seryl-adenylate 2004-06-25 2005-09-06 Chimnaronk, S.,Jeppesen, M.G.,Suzuki, T.,Nyborg, J.,Watanabe, K. Dual-mode recognition of noncanonical tRNAs(Ser) by seryl-tRNA synthetase in mammalian mitochondria Embo J. 2005 24 3369 3379 2ARM 16596639 Crystal Structure of the Complex of Phospholipase A2 with a natural compound atropine at 1.2 A resolution 2005-08-20 2005-09-20 Singh, N.,Jabeen, T.,Pal, A.,Sharma, S.,Perbandt, M.,Betzel, C.,Singh, T.P. Crystal structures of the complexes of a group IIA phospholipase A2 with two natural anti-inflammatory agents, anisic acid, and atropine reveal a similar mode of binding Proteins 2006 64 89 100 2BX8 16169013 Human serum albumin complexed with azapropazone 2005-07-25 2005-09-22 Ghuman, J.,Zunszain, P.A.,Petitpas, I.,Bhattacharya, A.A.,Otagiri, M.,Curry, S. Structural Basis of the Drug-Binding Specificity of Human Serum Albumin. J.Mol.Biol. 2005 353 38 0 2BXC 16169013 Human serum albumin complexed with phenylbutazone 2005-07-26 2005-09-22 Ghuman, J.,Zunszain, P.A.,Petitpas, I.,Bhattacharya, A.A.,Otagiri, M.,Curry, S. Structural Basis of the Drug-Binding Specificity of Human Serum Albumin. J.Mol.Biol. 2005 353 38 0 2BX4 16242152 Crystal Structure of SARS Coronavirus Main Proteinase (P21212) 2005-07-22 2005-09-26 Tan, J.,Verschueren, K.H.G.,Anand, K.,Shen, J.,Yang, M.,Xu, Y.,Rao, Z.,Bigalke, J.,Heisen, B.,Mesters, J.R.,Chen, K.,Shen, X.,Jiang, H.,Hilgenfeld, R. Ph-Dependent Conformational Flexibility of the Sars-Cov Main Proteinase (M(Pro)) Dimer: Molecular Dynamics Simulations and Multiple X-Ray Structure Analyses. J.Mol.Biol. 2005 354 25 0 1ZMY 16095608 cAbBCII-10 VHH framework with CDR loops of cAbLys3 grafted on it and in complex with hen egg white lysozyme 2005-05-11 2005-10-04 Saerens, D.,Pellis, M.,Loris, R.,Pardon, E.,Dumoulin, M.,Matagne, A.,Wyns, L.,Muyldermans, S.,Conrath, K. Identification of a universal VHH framework to graft non-canonical antigen-binding loops of camel single-domain antibodies J.Mol.Biol. 2005 352 597 607 1XJE 15475969 Structural mechanism of allosteric substrate specificity in a ribonucleotide reductase: dTTP-GDP complex 2004-09-23 2005-10-11 Larsson, K.-M.,Jordan, A.,Eliasson, R.,Reichard, P.,Logan, D.T.,Nordlund, P. Structural mechanism of allosteric substrate specificity regulation in a ribonucleotide reductase. Nat.Struct.Mol.Biol. 2004 11 1142 1149 1XWT 16246370 Structure Of A Cold-Adapted Family 8 Xylanase 2004-11-02 2005-10-11 Collins, T.,De Vos, D.,Hoyoux, A.,Savvides, S.N.,Gerday, C.,Van Beeumen, J.,Feller, G. Study of the active site residues of a glycoside hydrolase family 8 xylanase J.Mol.Biol. 2005 354 425 435 2BL0 16227209 Physarum polycephalum myosin II regulatory domain 2005-02-23 2005-10-13 Debreczeni, J.E.,Farkas, L.,Harmat, V.,Hetenyi, C.,Hajdu, I.,Zavodszky, P.,Kohama, K.,Nyitray, L. Structural Evidence for Non-Canonical Binding of Ca2+ to a Canonical EF-Hand of a Conventional Myosin. J.Biol.Chem. 2005 280 41458 0 2BQ8 15993892 Crystal structure of human purple acid phosphatase with an inhibitory conformation of the repression loop 2005-04-27 2005-10-24 Strater, N.,Jasper, B.,Scholte, M.,Krebs, B.,Duff, A.P.,Langley, D.B.,Han, R.,Averill, B.A.,Freeman, H.C.,Guss, J.M. Crystal Structures of Recombinant Human Purple Acid Phosphatase with and without an Inhibitory Conformation of the Repression Loop. J.Mol.Biol. 2005 351 233 0 1XXQ 16008570 Structure of a mannose-specific jacalin-related lectin from Morus nigra 2004-11-08 2005-10-25 Rabijns, A.,Barre, A.,Van Damme, E.J.M.,Peumans, W.J.,De Ranter, C.J.,Rouge, P. Structural analysis of the jacalin-related lectin MornigaM from the black mulberry (Morus nigra) in complex with mannose Febs J. 2005 272 3725 3732 1XXR 16008570 Structure of a mannose-specific jacalin-related lectin from Morus Nigra in complex with mannose 2004-11-08 2005-10-25 Rabijns, A.,Barre, A.,Van Damme, E.J.M.,Peumans, W.J.,De Ranter, C.J.,Rouge, P. Structural analysis of the jacalin-related lectin MornigaM from the black mulberry (Morus nigra) in complex with mannose Febs J. 2005 272 3725 3732 1Y1T Crystal Structure of the Uridine Phosphorylase from Salmonella Typhimurium at 1.77A Resolution 2004-11-19 2005-11-22 Gabdoulkhakov, A.G.,Dontsova, M.V.,Kachalova, G.S.,Betzel, C.,Ealick, S.E.,Mikhailov, A.M. Crystal Structures of Salmonella Typhimurium Uridine Phosphorylase in Native and Three Complexes Forms - with Uridine, Uracil and Sulfate. To be Published 0 0 0 0 1ZZH 16314410 Structure of the fully oxidized di-heme cytochrome c peroxidase from R. capsulatus 2005-06-14 2005-11-29 De Smet, L.,Savvides, S.N.,Van Horen, E.,Pettigrew, G.,Van Beeumen, J.J. Structural and mutagenesis studies on the cytochrome c peroxidase from Rhodobacter capsulatus provide new insights into structure-function relationships of bacterial di-heme peroxidases J.Biol.Chem. 2006 281 4371 4379 1XJN 15475969 Structural mechanism of allosteric substrate specificity in a ribonucleotide reductase: dATP-CDP complex 2004-09-23 2005-12-06 Larsson, K.-M.,Jordan, A.,Eliasson, R.,Reichard, P.,Logan, D.T.,Nordlund, P. Structural Mechanism of Allosteric Substrate Specificity Regulation in a Ribonucleotide Reductase Nat.Struct.Mol.Biol. 2004 11 1142 1149 2C7O 16340006 HhaI DNA methyltransferase complex with 13mer oligonucleotide containing 2-aminopurine adjacent to the target base (PCGC:GMGC) and SAH 2005-11-25 2005-12-14 Neely, R.K.,Daujotyte, D.,Grazulis, S.,Magennis, S.W.,Dryden, D.T.F.,Klimasauskas, S.,Jones, A.C. Time-Resolved Fluorescence of 2-Aminopurine as a Probe of Base Flipping in M.HhaI-DNA Complexes. Nucleic Acids Res. 2005 33 6953 0 2C7P 16340006 HhaI DNA methyltransferase complex with oligonucleotide containing 2- aminopurine opposite to the target base (GCGC:GMPC) and SAH 2005-11-25 2005-12-14 Neely, R.K.,Daujotyte, D.,Grazulis, S.,Magennis, S.W.,Dryden, D.T.F.,Klimasauskas, S.,Jones, A.C. Time-Resolved Fluorescence of 2-Aminopurine as a Probe of Base Flipping in M.HhaI-DNA Complexes. Nucleic Acids Res. 2005 33 6953 0 1YA5 16407954 Crystal structure of the titin domains z1z2 in complex with telethonin 2004-12-17 2005-12-20 Zou, P.,Pinotsis, N.,Lange, S.,Song, Y.H.,Popov, A.,Mavridis, I.,Mayans, O.M.,Gautel, M.,Wilmanns, M. Palindromic assembly of the giant muscle protein titin in the sarcomeric Z-disk Nature 2006 439 229 233 1YB7 17250917 Hydroxynitrile lyase from hevea brasiliensis in complex with 2,3-dimethyl-2-hydroxy-butyronitrile 2004-12-20 2005-12-20 Gartler, G.,Kratky, C.,Gruber, K. Structural determinants of the enantioselectivity of the hydroxynitrile lyase from Hevea brasiliensis J.Biotechnol. 2007 129 87 97 1T90 Crystal structure of methylmalonate semialdehyde dehydrogenase from Bacillus subtilis 2004-05-14 2006-01-03 Dubourg, H.,Didierjean, C.,Stines-Chaumeil, C.,Talfournier, F.,Branlant, G.,Aubry, A.,Corbier, C. Crystal structure analysis of Methylmalonate-Semialdehyde Dehydrogenase from Bacillus subtilis. To be published 0 0 0 0 1YP5 Yeast Myo5 SH3 domain, tetragonal crystal form 2005-01-29 2006-01-17 Gonfloni, S.,Kursula, P.,Sacco, R.,Cesareni, G.,Wilmanns, M. Yeast Myo5 SH3 domain, tetragonal crystal form To be Published 0 0 0 0 1ZU4 16343944 Crystal structure of FtsY from Mycoplasma mycoides- space group P21212 2005-05-30 2006-01-24 Gariani, T.,Samuelsson, T.,Sauer-Eriksson, A.E. Conformational variability of the GTPase domain of the signal recognition particle receptor FtsY J.Struct.Biol. 2006 153 85 96 1ZU5 16343944 Crystal structure of FtsY from Mycoplasma mycoides- space group H32 2005-05-30 2006-01-24 Gariani, T.,Samuelsson, T.,Sauer-Eriksson, A.E. Conformational variability of the GTPase domain of the signal recognition particle receptor FtsY J.Struct.Biol. 2006 153 85 96 2C1O 16427081 ENAIIHis Fab fragment in the free form 2005-09-19 2006-01-25 Parkkinen, T.,Nevanen, T.K.,Koivula, A.,Rouvinen, J. Crystal Structures of an Enantioselective Fab-Fragment in Free and Complex Forms. J.Mol.Biol. 2006 357 471 0 1YS7 16434396 Crystal structure of the response regulator protein prrA complexed with Mg2+ 2005-02-07 2006-02-07 Nowak, E.,Panjikar, S.,Konarev, P.,Svergun, D.I.,Tucker, P.A. The structural basis of signal transduction for the response regulator PrrA from Mycobacterium tuberculosis. J.Biol.Chem. 2006 281 9659 9666 2CEA 16484367 CELL DIVISION PROTEIN FTSH 2006-02-03 2006-02-09 Bieniossek, C.,Schalch, T.,Bumann, M.,Meister, M.,Meier, R.,Baumann, U. The Molecular Architecture of the Metalloprotease Ftsh. Proc.Natl.Acad.Sci.USA 2006 103 3066 0 1YPH High resolution structure of bovine alpha-chymotrypsin 2005-01-31 2006-02-14 Razeto, A.,Galunsky, B.,Kasche, V.,Wilson, K.S.,Lamzin, V.S. High resolution structure of native bovine alpha-chymotrypsin To be Published 0 0 0 0 2CB2 16484493 Sulfur Oxygenase Reductase from Acidianus Ambivalens 2005-12-28 2006-02-24 Urich, T.,Gomes, C.M.,Kletzin, A.,Frazao, C. X-Ray Structure of a Self-Compartmentalizing Sulfur Cycle Metalloenzyme Science 2006 311 996 0 2FPE 16456539 Conserved dimerization of the ib1 src-homology 3 domain 2006-01-16 2006-02-28 Kristensen, O.,Guenat, S.,Dar, I.,Allaman-Pillet, N.,Abderrahmani, A.,Ferdaoussi, M.,Roduit, R.,Maurer, F.,Beckmann, J.S.,Kastrup, J.S.,Gajhede, M.,Bonny, C. A unique set of SH3-SH3 interactions controls IB1 homodimerization Embo J. 2006 25 785 797 2C77 16734421 EF-Tu complexed with a GTP analog and the antibiotic GE2270 A 2005-11-18 2006-03-16 Parmeggiani, A.,Krab, I.M.,Okamura, S.,Nielsen, R.C.,Nyborg, J.,Nissen, P. Structural basis of the action of pulvomycin and GE2270 A on elongation factor Tu. Biochemistry 2006 45 6846 6857 2C78 16734421 EF-Tu complexed with a GTP analog and the antibiotic pulvomycin 2005-11-18 2006-03-16 Parmeggiani, A.,Krab, I.M.,Okamura, S.,Nielsen, R.C.,Nyborg, J.,Nissen, P. Structural basis of the action of pulvomycin and GE2270 A on elongation factor Tu. Biochemistry 2006 45 6846 6857 2C0R 16532449 CRYSTAL STRUCTURE OF PHOSPHOSERINE AMINOTRANSFERASE FROM BACILLUS CIRCULANS VAR. ALKALOPHILUS AT pH 8.5 2005-09-07 2006-03-22 Kapetaniou, E.G.,Thanassoulas, A.,Dubnovitsky, A.P.,Nounesis, G.,Papageorgiou, A.C. Effect of Ph on the Structure and Stability of Bacillus Circulans Ssp. Alkalophilus Phosphoserine Aminotransferase: Thermodynamic and Crystallographic Studies. Proteins: Struct., Funct., Bio 2006 63 742 0 1ZV5 16537393 Crystal structure of the variable domain of the camelid heavy-chain antibody D2-L29 in complex with hen egg white lysozyme 2005-06-01 2006-04-04 De Genst, E.,Silence, K.,Decanniere, K.,Conrath, K.,Loris, R.,Kinne, J.,Muyldermans, S.,Wyns, L. Molecular basis for the preferential cleft recognition by dromedary heavy-chain antibodies. Proc.Natl.Acad.Sci.Usa 2006 103 4586 4591 2FY6 16530221 Structure of the N-terminal domain of Neisseria meningitidis PilB 2006-02-07 2006-04-04 Ranaivoson, F.M.,Kauffmann, B.,Neiers, F.,Wu, J.,Boschi-Muller, S.,Panjikar, S.,Aubry, A.,Branlant, G.,Favier, F. The X-ray Structure of the N-terminal Domain of PILB from Neisseria meningitidis Reveals a Thioredoxin-fold J.Mol.Biol. 2006 358 443 454 1ZLB 16376474 Crystal structure of catalytically-active phospholipase A2 in the absence of calcium 2005-05-05 2006-04-25 Murakami, M.T.,Gabdoulkhakov, A.,Genov, N.,Cintra, A.C.,Betzel, C.,Arni, R.K. Insights into metal ion binding in phospholipases A(2): ultra high-resolution crystal structures of an acidic phospholipase A(2) in the Ca(2+) free and bound states. Biochimie 2006 88 543 549 2AGX 16614214 Crystal structure of the Schiff base intermediate in the reductive half-reaction of aromatic amine dehydrogenase (AADH) with tryptamine. P212121 form 2005-07-27 2006-04-25 Masgrau, L.,Roujeinikova, A.,Johannissen, L.O.,Hothi, P.,Basran, J.,Ranaghan, K.E.,Mulholland, A.J.,Sutcliffe, M.J.,Scrutton, N.S.,Leys, D. Atomic description of an enzyme reaction dominated by proton tunneling Science 2006 312 237 241 2AH0 16614214 Crystal structure of the carbinolamine intermediate in the reductive half-reaction of aromatic amine dehydrogenase (AADH) with tryptamine. Monoclinic form 2005-07-27 2006-04-25 Masgrau, L.,Roujeinikova, A.,Johannissen, L.O.,Hothi, P.,Basran, J.,Ranaghan, K.E.,Mulholland, A.J.,Sutcliffe, M.J.,Scrutton, N.S.,Leys, D. Atomic description of an enzyme reaction dominated by proton tunneling Science 2006 312 237 241 2G6W 16557306 Suicide inhibition of a-Oxamine Synthase: Structures of the Covalent Adducts of 8-Amino-7-oxonanoate Synthase with trifluoroalanine 2006-02-26 2006-04-25 Alexeev, D.,Baxter, R.L.,Campopiano, D.J.,Kerbarh, O.,Sawyer, L.,Tomczyk, N.,Watt, R.,Webster, S.P. Suicide inhibition of alpha-oxamine synthases: structures of the covalent adducts of 8-amino-7-oxononanoate synthase with trifluoroalanine. Org.Biomol.Chem. 2006 4 1209 1212 2CFZ 16684886 Crystal structure of SdsA1, an alkylsulfatase from Pseudomonas aeruginosa, in complex with 1-dodecanol 2006-02-26 2006-04-26 Hagelueken, G.,Adams, T.M.,Wiehlmann, L.,Widow, U.,Kolmar, H.,Tummler, B.,Heinz, D.W.,Schubert, W.-D. The Crystal Structure of Sdsa1, an Alkylsulfatase from Pseudomonas Aeruginosa, Defines a Third Class of Sulfatases. Proc.Natl.Acad.Sci.USA 2006 103 7631 0 1ZK5 16041081 Escherichia coli F17fG lectin domain complex with N-acetylglucosamine 2005-05-02 2006-05-02 Buts, L.,Wellens, A.,Van Molle, I.,Wyns, L.,Loris, R.,Lahmann, M.,Oscarson, S.,De Greve, H.,Bouckaert, J. Impact of natural variation in bacterial F17G adhesins on crystallization behaviour. Acta Crystallogr.,Sect.D 2005 61 1149 1159 2GO1 NAD-dependent formate dehydrogenase from Pseudomonas sp.101 2006-04-12 2006-05-02 Filippova, E.V.,Polyakov, K.M.,Tikhonova, T.V.,Stekhanova, T.N.,Boiko, K.M.,Popov, V.O. Structure of a new crystal modification of the bacterial NAD-dependent formate dehydrogenase with a resolution of 2.1 A Crystallography reports 2005 50 796 800 2F3Q 16464598 Crystal structure of the glycogen phosphorylase B / methyl-N-(beta-D-glucopyranosyl)oxamate complex 2005-11-22 2006-05-09 Hadjiloi, T.,Tiraidis, C.,Chrysina, E.D.,Leonidas, D.D.,Oikonomakos, N.G.,Tsipos, P.,Gimisis, T. Binding of oxalyl derivatives of beta-d-glucopyranosylamine to muscle glycogen phosphorylase b. Bioorg.Med.Chem. 2006 14 3872 3882 1ZXY 16714288 Anthranilate Phosphoribosyltransferase from Sulfolobus solfataricus in complex with PRPP and Magnesium 2005-06-09 2006-05-23 Marino, M.,Deuss, M.,Svergun, D.I.,Konarev, P.V.,Sterner, R.,Mayans, O. Structural and mutational analysis of substrate complexation by anthranilate phosphoribosyltransferase from Sulfolobus solfataricus. J.Biol.Chem. 2006 281 21410 21421 2F6D 16649993 Structure of the complex of a glucoamylase from Saccharomycopsis fibuligera with acarbose 2005-11-29 2006-05-23 Sevcik, J.,Hostinova, E.,Solovicova, A.,Gasperik, J.,Dauter, Z.,Wilson, K.S. Structure of the complex of a yeast glucoamylase with acarbose reveals the presence of a raw starch binding site on the catalytic domain. Febs J. 2006 273 2161 2171 2F6D 16649993 Structure of the complex of a glucoamylase from Saccharomycopsis fibuligera with acarbose 2005-11-29 2006-05-23 Sevcik, J.,Hostinova, E.,Solovicova, A.,Gasperik, J.,Dauter, Z.,Wilson, K.S. Structure of the complex of a yeast glucoamylase with acarbose reveals the presence of a raw starch binding site on the catalytic domain. Febs J. 2006 273 2161 2171 2F6D 16649993 Structure of the complex of a glucoamylase from Saccharomycopsis fibuligera with acarbose 2005-11-29 2006-05-23 Sevcik, J.,Hostinova, E.,Solovicova, A.,Gasperik, J.,Dauter, Z.,Wilson, K.S. Structure of the complex of a yeast glucoamylase with acarbose reveals the presence of a raw starch binding site on the catalytic domain. Febs J. 2006 273 2161 2171 2FF2 16630632 Crystal structure of Trypanosoma vivax nucleoside hydrolase co-crystallized with ImmucillinH 2005-12-18 2006-05-23 Versees, W.,Barlow, J.,Steyaert, J. Transition-state Complex of the Purine-specific Nucleoside Hydrolase of T.vivax: Enzyme Conformational Changes and Implications for Catalysis. J.Mol.Biol. 2006 359 331 346 2FPC 16531499 Structure of Strictosidine Synthase, the Biosynthetic Entry to the Monoterpenoid Indole Alkaloid Family 2006-01-16 2006-05-23 Ma, X.,Panjikar, S.,Koepke, J.,Loris, E.,Stockigt, J. The structure of Rauvolfia serpentina strictosidine synthase is a novel six-bladed beta-propeller fold in plant proteins Plant Cell 2006 18 907 920 2BSB 16041081 E. coli F17e-G lectin domain complex with N-acetylglucosamine 2005-05-20 2006-05-24 Buts, L.,Wellens, A.,Van Molle, I.,Wyns, L.,Loris, R.,Lahmann, M.,Oscarson, S.,De Greve, H.,Bouckaert, J. Impact of Natural Variation in Bacterial F17G Adhesins on Crystallization Behaviour. Acta Crystallogr.,Sect.D 2005 61 1149 0 1YN8 SH3 domain of yeast NBP2 2005-01-24 2006-05-30 Kursula, P.,Kursula, I.,Zou, P.,Lehmann, F.,Song, Y.H.,Wilmanns, M. Structural analysis of the yeast SH3 domain proteome To be Published 0 0 0 0 2GWA 17477457 Crystal Structure of a Complex Formed Between the DNA Holliday Junction and a Bis-Acridine Molecule. 2006-05-04 2006-06-06 Brogden, A.L.,Hopcroft, N.H.,Searcey, M.,Cardin, C.J. Ligand bridging of the DNA Holliday junction: molecular recognition of a stacked-X four-way junction by a small molecule. Angew.Chem.Int.Ed.Engl. 2007 46 3850 3854 2CNU Atomic resolution structure of SAICAR-synthase from Saccharomyces cerevisiae complexed with aspartic acid 2006-05-24 2006-06-07 Urusova, D.V.,Antonyuk, S.V.,Grebenko, A.I.,Levdikov, V.M.,Barynin, V.V.,Popov, A.N.,Lamzin, V.S.,Melik-Adamyan, W.R. Saicar Synthase: Substrate Recognition, Conformational Flexibility and Catalysis. To be Published 0 0 0 0 2CNQ Atomic resolution structure of SAICAR-synthase from Saccharomyces cerevisiae complexed with ADP, AICAR, succinate 2006-05-23 2006-06-08 Urusova, D.V.,Antonyuk, S.V.,Grebenko, A.I.,Levdikov, V.M.,Barynin, V.V.,Popov, A.N.,Lamzin, V.S.,Melik-Adamyan, W.R. Saicar Synthase: Substrate Recognition, Conformational Flexibility and Catalysis. To be Published 0 0 0 0 2CNV SAICAR-synthase from Saccharomyces cerevisiae complexed SAICAR 2006-05-24 2006-06-08 Urusova, D.V.,Levdikov, V.M.,Antonyuk, S.V.,Grebenko, A.I.,Lamzin, V.S.,Melik-Adamyan, V.R. X-Ray Diffraction Study of the Complex of the Enzyme Saicar Synthase with the Reaction Product Crystallogr.Rep.(Transl. Krist 2006 51 824 0 2C88 16710301 Crystal Structure Of (SR) Calcium-ATPase E2(Tg):AMPPCP form 2005-12-02 2006-06-13 Jensen, A.M.,Sorensen, T.L.,Olesen, C.,Moller, J.V.,Nissen, P. Modulatory and Catalytic Modes of ATP Binding by the Calcium Pump Embo J. 2006 25 2305 0 2F5V 16716069 Reaction geometry and thermostability mutant of pyranose 2-oxidase from the white-rot fungus Peniophora sp. 2005-11-28 2006-06-13 Bannwarth, M.,Heckmann-Pohl, D.,Bastian, S.,Giffhorn, F.,Schulz, G.E. Reaction Geometry and Thermostable Variant of Pyranose 2-Oxidase from the White-Rot Fungus Peniophora sp. Biochemistry 2006 45 6587 6595 2F6C 16716069 Reaction geometry and thermostability of pyranose 2-oxidase from the white-rot fungus Peniophora sp., Thermostability mutant E542K 2005-11-29 2006-06-13 Bannwarth, M.,Heckmann-Pohl, D.,Bastian, S.,Giffhorn, F.,Schulz, G.E. Reaction Geometry and Thermostable Variant of Pyranose 2-Oxidase from the White-Rot Fungus Peniophora sp. Biochemistry 2006 45 6587 6595 2GHH 16762924 Conformational mobility in the active site of a heme peroxidase 2006-03-27 2006-06-13 Badyal, S.K.,Joyce, M.G.,Sharp, K.H.,Seward, H.E.,Mewies, M.,Basran, J.,Macdonald, I.K.,Moody, P.C.E.,Raven, E.L. Conformational Mobility in the Active Site of a Heme Peroxidase. J.Biol.Chem. 2006 281 24512 24520 2GHK 16762924 Conformational mobility in the active site of a heme peroxidase 2006-03-27 2006-06-13 Badyal, S.K.,Joyce, M.G.,Sharp, K.H.,Seward, H.E.,Mewies, M.,Basran, J.,Macdonald, I.K.,Moody, P.C.E.,Raven, E.L. Conformational Mobility in the Active Site of a Heme Peroxidase. J.Biol.Chem. 2006 281 24512 24520 1YRP 27133022 Catalytic domain of human ZIP kinase phosphorylated at Thr265 2005-02-04 2006-06-20 Simon, B.,Huart, A.S.,Temmerman, K.,Vahokoski, J.,Mertens, H.D.,Komadina, D.,Hoffmann, J.E.,Yumerefendi, H.,Svergun, D.I.,Kursula, P.,Schultz, C.,McCarthy, A.A.,Hart, D.J.,Wilmanns, M. Death-Associated Protein Kinase Activity Is Regulated by Coupled Calcium/Calmodulin Binding to Two Distinct Sites Structure 2016 0 0 0 2FXV 16716072 Bacillus subtilis Xanthine Phosphoribosyltransferase in Complex with Guanosine 5'-monophosphate (GMP) 2006-02-06 2006-06-20 Arent, S.,Kadziola, A.,Larsen, S.,Neuhard, J.,Jensen, K.F. The Extraordinary Specificity of Xanthine Phosphoribosyltransferase from Bacillus subtilis Elucidated by Reaction Kinetics, Ligand Binding, and Crystallography Biochemistry 2006 45 6615 6627 2F8V 16713295 Structure of full length telethonin in complex with the N-terminus of titin 2005-12-04 2006-06-27 Pinotsis, N.,Petoukhov, M.,Lange, S.,Svergun, D.,Zou, P.,Gautel, M.,Wilmanns, M. Evidence for a dimeric assembly of two titin/telethonin complexes induced by the telethonin C-terminus. J.Struct.Biol. 2006 155 239 250 2CD7 16797027 Staphylococcus aureus pI258 arsenate reductase (ArsC) H62Q mutant 2006-01-23 2006-06-28 Roos, G.,Buts, L.,Van Belle, K.,Brosens, E.,Geerlings, P.,Loris, R.,Wyns, L.,Messens, J. Interplay between Ion Binding and Catalysis in the Thioredoxin-Coupled Arsenate Reductase Family. J.Mol.Biol. 2006 360 826 0 2H6B 16803881 Crystal structure of oxidized CprK in complex with o-chlorophenolacetic acid 2006-05-31 2006-07-04 Joyce, M.G.,Levy, C.,Pop, S.M.,Biehl, B.D.,Doukov, T.I.,Ryter, J.M.,Mazon, H.,Smidt, H.,van den Heuvel, R.H.,Ragsdale, S.W.,van der Oost, J.,Leys, D. CprK Crystal Structures Reveal Mechanism for Transcriptional Control of Halorespiration. J.Biol.Chem. 2006 281 28318 28325 2GEZ 16725155 Crystal structure of potassium-independent plant asparaginase 2006-03-21 2006-07-25 Michalska, K.,Bujacz, G.,Jaskolski, M. Crystal structure of plant asparaginase. J.Mol.Biol. 2006 360 105 116 2GME 16824540 Metal-free (apo) P. angolensis seed lectin 2006-04-06 2006-07-25 Garcia-Pino, A.,Buts, L.,Wyns, L.,Loris, R. Interplay Between Metal Binding and cis/trans Isomerization in Legume Lectins: Structural and Thermodynamic Study of P. angolensis Lectin. J.Mol.Biol. 2006 361 153 167 2GMM 16824540 Metal-free (apo) P. angolensis seed lectin in complex with Man-alpha(1-2)Man 2006-04-07 2006-07-25 Garcia-Pino, A.,Buts, L.,Wyns, L.,Loris, R. Interplay Between Metal Binding and cis/trans Isomerization in Legume Lectins: Structural and Thermodynamic Study of P. angolensis Lectin. J.Mol.Biol. 2006 361 153 167 2GN3 16824540 Metal-free (apo-PAL) in complex with alpha-D-Met-Man 2006-04-09 2006-07-25 Garcia-Pino, A.,Buts, L.,Wyns, L.,Loris, R. Interplay Between Metal Binding and cis/trans Isomerization in Legume Lectins: Structural and Thermodynamic Study of P. angolensis Lectin. J.Mol.Biol. 2006 361 153 167 2GNB 16824540 EDTA-treated (2 weeks) P. angolensis lectin 2006-04-09 2006-07-25 Garcia-Pino, A.,Buts, L.,Wyns, L.,Loris, R. Interplay Between Metal Binding and cis/trans Isomerization in Legume Lectins: Structural and Thermodynamic Study of P. angolensis Lectin. J.Mol.Biol. 2006 361 153 167 2GND 16824540 One hour EDTA treatment, P. angolensis lectin 2006-04-10 2006-07-25 Garcia-Pino, A.,Buts, L.,Wyns, L.,Loris, R. Interplay Between Metal Binding and cis/trans Isomerization in Legume Lectins: Structural and Thermodynamic Study of P. angolensis Lectin. J.Mol.Biol. 2006 361 153 167 2GNM 16824540 P. angolensis lectin (PAL) treated with EDTA for 39 hours 2006-04-10 2006-07-25 Garcia-Pino, A.,Buts, L.,Wyns, L.,Loris, R. Interplay Between Metal Binding and cis/trans Isomerization in Legume Lectins: Structural and Thermodynamic Study of P. angolensis Lectin. J.Mol.Biol. 2006 361 153 167 2GNT 16824540 EDTA treated P. angolensis lectin (PAL) remetallized with calcium (1 hour treatment) 2006-04-11 2006-07-25 Garcia-Pino, A.,Buts, L.,Wyns, L.,Loris, R. Interplay Between Metal Binding and cis/trans Isomerization in Legume Lectins: Structural and Thermodynamic Study of P. angolensis Lectin. J.Mol.Biol. 2006 361 153 167 2AR6 16704415 Pterocarpus angolensis Lectin (PAL) In Complex With The Pentasaccharide M592 2005-08-19 2006-08-01 Buts, L.,Garcia-Pino, A.,Imberty, A.,Amiot, N.,Boons, G.J.,Beeckmans, S.,Versees, W.,Wyns, L.,Loris, R. Structural basis for the recognition of complex-type biantennary oligosaccharides by Pterocarpus angolensis lectin. Febs J. 2006 273 2407 2420 2ARB 16704415 Pterocarpus angolensis Lectin (PAL) In Complex With The GlcNAc(beta1-2)Man Disaccharide 2005-08-19 2006-08-01 Buts, L.,Garcia-Pino, A.,Imberty, A.,Amiot, N.,Boons, G.J.,Beeckmans, S.,Versees, W.,Wyns, L.,Loris, R. Structural basis for the recognition of complex-type biantennary oligosaccharides by Pterocarpus angolensis lectin. Febs J. 2006 273 2407 2420 2ARE 16704415 Pterocarpus angolensis Lectin (PAL) In Complex With D-Mannose (anomeric mixture) 2005-08-19 2006-08-01 Buts, L.,Garcia-Pino, A.,Imberty, A.,Amiot, N.,Boons, G.J.,Beeckmans, S.,Versees, W.,Wyns, L.,Loris, R. Structural basis for the recognition of complex-type biantennary oligosaccharides by Pterocarpus angolensis lectin. Febs J. 2006 273 2407 2420 2AUY 16704415 Pterocarpus angolensis lectin in complex with the trisaccharide GlcNAc(b1-2)Man(a1-3)Man 2005-08-29 2006-08-08 Buts, L.,Garcia-Pino, A.,Imberty, A.,Amiot, N.,Boons, G.-J.,Beeckmans, S.,Versees, W.,Wyns, L.,Loris, R. Structural basis for the recognition of complex-type biantennary oligosaccharides by Pterocarpus angolensis lectin. Febs J. 2006 273 2407 2420 2BK8 M1 domain from titin 2005-02-11 2006-08-09 Mueller, S.,Kursula, I.,Wilmanns, M. Structure of M1 Domain from Titin To be Published 0 0 0 0 1ZUK Yeast BBC1 Sh3 domain complexed with a peptide from Las17 2005-05-31 2006-08-15 Kursula, P.,Kursula, I.,Lehmann, F.,Zou, P.,Song, Y.H.,Wilmanns, M. Structural genomics of yeast SH3 domains To be Published 0 0 0 0 2FMD 16567368 Structural basis of carbohydrate recognition by Bowringia milbraedii seed agglutinin 2006-01-09 2006-08-22 Buts, L.,Garcia-Pino, A.,Wyns, L.,Loris, R. Structural basis of carbohydrate recognition by a Man(alpha1-2)Man-specific lectin from Bowringia milbraedii. Glycobiology 2006 16 635 640 2C49 16929110 Crystal Structure of Methanocaldococcus jannaschii Nucleoside Kinase - An Archaeal Member of the Ribokinase Family 2005-10-17 2006-08-30 Arnfors, L.,Hansen, T.,Schoenheit, P.,Ladenstein, R.,Meining, W. Structure of Methanocaldococcus Jannaschii Nucleoside Kinase: An Archaeal Member of the Ribokinase Family. Acta Crystallogr.,Sect.D 2006 62 1085 0 2B45 Crystal structure of an engineered uninhibited Bacillus subtilis xylanase in free state 2005-09-22 2006-09-19 Sansen, S.,Dewilde, M.,De Ranter, C.J.,Gebruers, K.,Brijs, K.,Courtin, C.M.,Delcour, J.A.,Rabijns, A. Crystal structure of the Triticum xylanse inhibitor-I in complex with bacillus subtilis xylanase To be Published 0 0 0 0 2BW1 16997323 Iron-bound crystal structure of Dps-like peroxide resistance protein (Dpr) from Streptococcus suis. 2005-07-07 2006-09-27 Kauko, A.,Pulliainen, A.T.,Haataja, S.,Meyer-Klaucke, W.,Finne, J.,Papageorgiou, A.C. Iron incorporation in Streptococcus suis Dps-like peroxide resistance protein Dpr requires mobility in the ferroxidase center and leads to the formation of a ferrihydrite-like core. J. Mol. Biol. 2006 364 97 109 2CF7 16997323 Asp74Ala mutant crystal structure for Dps-like peroxide resistance protein Dpr from Streptococcus suis. 2006-02-16 2006-09-28 Kauko, A.,Pulliainen, A.T.,Haataja, S.,Meyer-Klaucke, W.,Finne, J.,Papageorgiou, A.C. Iron incorporation in Streptococcus suis Dps-like peroxide resistance protein Dpr requires mobility in the ferroxidase center and leads to the formation of a ferrihydrite-like core. J. Mol. Biol. 2006 364 97 109 2AHN High resolution structure of a cherry allergen Pru av 2 2005-07-28 2006-10-10 Dall'Antonia, Y.,Pavkov, T.,Fuchs, H.,Breiteneder, H.,Keller, W. The high-resolution crystal structure of an allergenic thaumatin-like protein, Pru av 2, isolated from ripe cherries To be published 0 0 0 0 2FP0 17015823 human ADP-ribosylhydrolase 3 2006-01-15 2006-10-10 Mueller-Dieckmann, C.,Kernstock, S.,Lisurek, M.,von Kries, J.P.,Haag, F.,Weiss, M.S.,Koch-Nolte, F. The structure of human ADP-ribosylhydrolase 3 (ARH3) provides insights into the reversibility of protein ADP-ribosylation. Proc.Natl.Acad.Sci.Usa 2006 103 15026 15031 2J3Z 17027031 Crystal structure of the enzymatic component C2-I of the C2-toxin from Clostridium botulinum at pH 6.1 2006-08-23 2006-10-11 Schleberger, C.,Hochmann, H.,Barth, H.,Aktories, K.,Schulz, G.E. Structure and Action of the Binary C2 Toxin from Clostridium Botulinum. J.Mol.Biol. 2006 364 705 0 1ZUY High-resolution structure of yeast Myo5 SH3 domain 2005-06-01 2006-10-24 Wilmanns, M.,Kursula, P.,Gonfloni, S.,Ferracuti, S.,Cesareni, G. High-resolution structure of yeast Myo5 SH3 domain To be published 0 0 0 0 1ZX6 High-resolution crystal structure of yeast Pin3 SH3 domain 2005-06-07 2006-10-24 Kursula, P.,Kursula, I.,Lehmann, F.,Zou, P.,Song, Y.H.,Wilmanns, M. Structural genomics of yeast SH3 domains To be Published 0 0 0 0 2FJ9 17044054 High resolution crystal structure of the unliganded human ACBP 2006-01-02 2006-10-31 Taskinen, J.P.,van Aalten, D.M.,Knudsen, J.,Wierenga, R.K. High resolution crystal structures of unliganded and liganded human liver ACBP reveal a new mode of binding for the acyl-CoA ligand. Proteins 2006 66 229 238 1ZUZ Calmodulin in complex with a mutant peptide from human DRP-1 kinase 2005-06-01 2006-11-14 Kursula, P.,Vahokoski, J.,Wilmanns, M. Recognition of human death-associated protein kinases by calmodulin To be Published 0 0 0 0 2IH8 17045575 A low-dose crystal structure of a recombinant Melanocarpus albomyces laccase 2006-09-26 2006-11-14 Hakulinen, N.,Kruus, K.,Koivula, A.,Rouvinen, J. A crystallographic and spectroscopic study on the effect of X-ray radiation on the crystal structure of Melanocarpus albomyces laccase. Biochem.Biophys.Res.Commun. 2006 350 929 934 2IH9 17045575 A high-dose crystal structure of a recombinant Melanocarbus albomyces laccase 2006-09-26 2006-11-14 Hakulinen, N.,Kruus, K.,Koivula, A.,Rouvinen, J. A crystallographic and spectroscopic study on the effect of X-ray radiation on the crystal structure of Melanocarpus albomyces laccase. Biochem.Biophys.Res.Commun. 2006 350 929 934 2D4N 17169987 Crystal Structure of M-PMV dUTPase complexed with dUPNPP, substrate analogue 2005-10-20 2006-11-21 Nemeth-Pongracz, V.,Barabas, O.,Fuxreiter, M.,Simon, I.,Pichova, I.,Rumlova, M.,Zabranska, H.,Svergun, D.,Petoukhov, M.,Harmat, V.,Klement, E.,Hunyadi-Gulyas, E.,Medzihradszky, K.F.,Konya, E.,Vertessy, B.G. Flexible segments modulate co-folding of dUTPase and nucleocapsid proteins. Nucleic Acids Res. 2007 35 495 505 2JBK 17372356 membrane-bound glutamate carboxypeptidase II (GCPII) in complex with quisqualic acid (quisqualate, alpha-amino-3,5-dioxo-1,2,4- oxadiazolidine-2-propanoic acid) 2006-12-07 2006-12-18 Mesters, J.R.,Henning, K.,Hilgenfeld, R. Human Glutamate Carboxypeptidase II Inhibition: Structures of Gcpii in Complex with Two Potent Inhibitors, Quisqualate and 2-Pmpa. Acta Crystallogr.,Sect.D 2007 63 508 0 2JAE 17234209 The structure of L-amino acid oxidase from Rhodococcus opacus in the unbound state 2006-11-27 2007-01-30 Faust, A.,Niefind, K.,Hummel, W.,Schomburg, D. The Structure of a Bacterial L-Amino Acid Oxidase from Rhodococcus Opacus Gives New Evidence for the Hydride Mechanism for Dehydrogenation. J.Mol.Biol. 2007 367 234 0 2IWZ 17242430 Human mitochondrial beta-ketoacyl ACP synthase complexed with hexanoic acid 2006-07-05 2007-02-06 Christensen, C.E.,Kragelund, B.B.,von Wettstein-Knowles, P.,Henriksen, A. Structure of the Human Beta-Ketoacyl [Acp] Synthase from the Mitochondrial Type II Fatty Acid Synthase. Protein Sci. 2007 16 261 272 2IX4 17242430 Arabidopsis thaliana mitochondrial beta-ketoacyl ACP synthase hexanoic acid complex 2006-07-06 2007-02-06 Christensen, C.E.,Kragelund, B.B.,von Wettstein-Knowles, P.,Henriksen, A. Structure of the Human Beta-Ketoacyl [Acp] Synthase from the Mitochondrial Type II Fatty Acid Synthase. Protein Sci. 2007 16 261 272 2O0T 19543810 The three dimensional structure of diaminopimelate decarboxylase from Mycobacterium tuberculosis reveals a tetrameric enzyme organisation 2006-11-28 2007-02-13 Weyand, S.,Kefala, G.,Svergun, D.I.,Weiss, M.S. The three-dimensional structure of diaminopimelate decarboxylase from Mycobacterium tuberculosis reveals a tetrameric enzyme organisation. J Struct Funct Genomics 2009 10 209 217 2E7Z 17360611 Acetylene Hydratase from Pelobacter acetylenicus 2007-01-15 2007-02-27 Seiffert, G.B.,Ullmann, G.M.,Messerschmidt, A.,Schink, B.,Kroneck, P.M.H.,Einsle, O. Structure of the non-redox-active tungsten/[4Fe:4S] enzyme acetylene hydratase Proc.Natl.Acad.Sci.Usa 2007 104 3073 3077 2JCG 17401189 Apo form of the catabolite control protein A (ccpA) from bacillus megaterium, with the DNA binding domain 2006-12-22 2007-03-06 Singh, R.K.,Palm, G.J.,Panjikar, S.,Hinrichs, W. Structure of the Apo Form of the Catabolite Control Protein a (Ccpa) from Bacillus Megaterium with a DNA-Binding Domain. Acta Crystallogr.,Sect.F 2007 63 253 0 2JBL 17337272 PHOTOSYNTHETIC REACTION CENTER FROM BLASTOCHLORIS VIRIDIS 2006-12-08 2007-03-13 Lancaster, C.R.D.,Hunte, C.,Kelley, J.,Trumpower, B.L.,Ditchfield, R. A Comparison of Stigmatellin Conformations, Free and Bound to the Photosynthetic Reaction Center and the Cytochrome Bc(1) Complex. J.Mol.Biol. 2007 368 197 0 2CFF Crystal Structure Of N-((5'-Phosphoribosyl)-Formimino)-5- Aminoimidazol-4-Carboxamid Ribonucleotid Isomerase mutant D127V (Ec 3. 1.3.15, Hisa) 2006-02-20 2007-03-20 He, C.,Kuper, J.,Sterner, R.,Wilmmans, M. Crystal Structure of N-((5'-Phosphoribosyl)- Formimino)-5-Aminoimidazol-4-Carboxamid Ribonucleotid Isomerase Mutant D127V (Ec 3.1.3.15, Hisa) To be Published 0 0 0 0 2OYF Crystal Structure of the complex of phospholipase A2 with indole acetic acid at 1.2 A resolution 2007-02-22 2007-03-20 Kumar, S.,Hariprasad, G.,Singh, N.,Sharma, S.,Kaur, P.,Perbandt, M.,Betzel, C.,Singh, T.P. Crystal Structure of the complex of phospholipase A2 with indole acetic acid at 1.2 A resolution To be Published 0 0 0 0 2IB7 17371050 Crystallographic and kinetic studies of human mitochondrial acetoacetyl-CoA thiolase (T2): the importance of potassium and chloride for its structure and function 2006-09-11 2007-04-03 Haapalainen, A.M.,Merilainen, G.,Pirila, P.L.,Kondo, N.,Fukao, T.,Wierenga, R.K. Crystallographic and Kinetic Studies of Human Mitochondrial Acetoacetyl-CoA Thiolase: The Importance of Potassium and Chloride Ions for Its Structure and Function Biochemistry 2007 46 4305 4321 2IBU 17371050 Crystallographic and kinetic studies of human mitochondrial acetoacetyl-CoA thiolase (T2): the importance of potassium and chloride for its structure and function 2006-09-12 2007-04-03 Haapalainen, A.M.,Merilainen, G.,Pirila, P.L.,Kondo, N.,Fukao, T.,Wierenga, R.K. Crystallographic and Kinetic Studies of Human Mitochondrial Acetoacetyl-CoA Thiolase: The Importance of Potassium and Chloride Ions for Its Structure and Function Biochemistry 2007 46 4305 4321 2J6G 17368480 FaeG from F4ac ETEC strain 5_95, produced in tobacco plant chloroplast 2006-09-28 2007-04-10 Van Molle, I.,Joensuu, J.J.,Buts, L.,Panjikar, S.,Kotiaho, M.,Bouckaert, J.,Wyns, L.,Niklander-Teeri, V.,De Greve, H. Chloroplasts Assemble the Major Subunit Faeg of Escherichia Coli F4 (K88) Fimbriae Into Strand-Swapped Dimers J.Mol.Biol. 2007 368 791 0 2H0N 18198873 Structure of the fully modified left-handed cyclohexene nucleic acid sequence GTGTACAC 2006-05-15 2007-04-24 Robeyns, K.,Herdewijn, P.,Van Meervelt, L. Structure of the fully modified left-handed cyclohexene nucleic acid sequence GTGTACAC. J.Am.Chem.Soc. 2008 130 1979 1984 2JHG 17429946 Structural evidence for a ligand coordination switch in liver alcohol dehydrogenase 2007-02-22 2007-04-24 Meijers, R.,Adolph, H.W.,Dauter, Z.,Wilson, K.S.,Lamzin, V.S.,Cedergren-Zeppezauer, E.S. Structural Evidence for a Ligand Coordination Switch in Liver Alcohol Dehydrogenase Biochemistry 2007 46 5446 0 2OIZ 17475620 Crystal Structure of the Tryptamine-Derived (Indol-3-Acetamide)-TTQ Adduct of Aromatic Amine Dehydrogenase 2007-01-12 2007-04-24 Roujeinikova, A.,Hothi, P.,Masgrau, L.,Sutcliffe, M.J.,Scrutton, N.S.,Leys, D. New insights into the reductive half-reaction mechanism of aromatic amine dehydrogenase revealed by reaction with carbinolamine substrates. J.Biol.Chem. 2007 282 23766 23777 2OAY 17488724 Crystal structure of latent human C1-inhibitor 2006-12-18 2007-05-01 Beinrohr, L.,Harmat, V.,Dobo, J.,Lorincz, Z.,Gal, P.,Zavodszky, P. C1 inhibitor serpin domain structure reveals the likely mechanism of heparin potentiation and conformational disease J.Biol.Chem. 2007 282 21100 21109 2OFD 17391699 The Crystal Structure of Sclerotium rolfsii lectin in complex with N-acetyl-D-galactosamine 2007-01-03 2007-05-01 Leonidas, D.D.,Swamy, B.M.,Hatzopoulos, G.N.,Gonchigar, S.J.,Chachadi, V.B.,Inamdar, S.R.,Zographos, S.E.,Oikonomakos, N.G. Structural Basis for the Carbohydrate Recognition of the Sclerotium rolfsii Lectin J.Mol.Biol. 2007 368 1145 1161 2UUT The 2.4 angstrom resolution structure of the D346G mutant of the Sapporo Virus RdRp polymerase 2007-03-07 2007-05-01 Fullerton, S.W.B.,Robel, I.,Schuldt, L.,Gebhardt, J.,Tucker, P.,Rohayem, J. The 2.4 Angstrom Resolution Structure of the D346G Mutant of the Sapporo Virus Rdrp Polymerase To be Published 0 0 0 0 2UUW 2.75 angstrom structure of the D347G D348G mutant structure of Sapporo Virus RdRp Polymerase 2007-03-07 2007-05-01 Fullerton, S.,Robel, I.,Schuldt, L.,Gebhardt, J.,Tucker, P.,Rohayem, J. The 2.76 Angstrom Resolution Structure of the D347G D348G Mutant Structure of Sapporo Virus Rdrp Polymerase To be Published 0 0 0 0 2P51 17452359 Crystal structure of the S. pombe Pop2p deadenylation subunit 2007-03-14 2007-05-15 Thyssen Jonstrup, A.,Andersen, K.R.,Van, L.B.,Brodersen, D.E. The 1.4-A crystal structure of the S. pombe Pop2p deadenylase subunit unveils the configuration of an active enzyme Nucleic Acids Res. 2007 35 3153 3164 2HAN 17426125 Structural basis of heterodimeric ecdysteroid receptor interaction with natural response element hsp27 gene promoter 2006-06-13 2007-05-22 Jakob, M.,Kolodziejczyk, R.,Orlowski, M.,Krzywda, S.,Kowalska, A.,Dutko-Gwozdz, J.,Gwozdz, T.,Kochman, M.,Jaskolski, M.,Ozyhar, A. Novel DNA-binding element within the C-terminal extension of the nuclear receptor DNA-binding domain. Nucleic Acids Res. 2007 35 2705 2718 2NXW 17403037 Crystal structure of phenylpyruvate decarboxylase of Azospirillum brasilense 2006-11-20 2007-05-29 Versees, W.,Spaepen, S.,Vanderleyden, J.,Steyaert, J. The crystal structure of phenylpyruvate decarboxylase from Azospirillum brasilense at 1.5 A resolution. Implications for its catalytic and regulatory mechanism. Febs J. 2007 274 2363 2375 2PWA Crystal Structure of the complex of Proteinase K with Alanine Boronic acid at 0.83A resolution 2007-05-11 2007-05-29 Jain, R.,Singh, N.,Perbandt, M.,Betzel, C.,Sharma, S.,Kaur, P.,Srinivasan, A.,Singh, T.P. Crystal structure of the complex of Proteinase K with Alanine Boronic Acid at 0.83A Resolution To be Published 0 0 0 0 2HSG 17500051 Structure of transcription regulator CcpA in its DNA-free state 2006-07-21 2007-06-05 Loll, B.,Saenger, W.,Biesiadka, J. Structure of full-length transcription regulator CcpA in the apo form. Biochim.Biophys.Acta 2007 1774 732 736 2Q1P Crystal Structure of Phospholipase A2 complex with propanol at 1.5 A resolution 2007-05-25 2007-06-05 Kumar, S.,Hariprasad, G.,Singh, N.,Sharma, S.,Kaur, P.,Perbandt, M.,Betzel, C.,Singh, T.P. Crystal Structure of Phospholipase A2 complex with propanol at 1.5 A resolution To be Published 0 0 0 0 2V1J 17565988 Crystal structure of radiation-induced metmyoglobin - aqua ferrous myoglobin at pH 8.7 2007-05-24 2007-06-12 Hersleth, H.-P.,Uchida, T.,Rohr, A.K.,Teschner, T.,Schunemann, V.,Kitagawa, T.,Trautwein, A.X.,Gorbitz, C.H.,Andersson, K.K. Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O J.Biol.Chem. 2007 282 23372 0 2J4D 17188299 Cryptochrome 3 from Arabidopsis thaliana 2006-08-28 2007-06-19 Klar, T.,Pokorny, R.,Moldt, J.,Batschauer, A.,Essen, L.-O. Cryptochrome 3 from Arabidopsis Thaliana: Structural and Functional Analysis of its Complex with a Folate Light Antenna J.Mol.Biol. 2007 366 954 0 1VSO 17581823 Crystal Structure of the Ligand-Binding Core of iGluR5 in Complex With the Antagonist (S)-ATPO at 1.85 A resolution 2007-03-29 2007-07-03 Hald, H.,Naur, P.,Pickering, D.S.,Sprogoe, D.,Madsen, U.,Timmermann, D.B.,Ahring, P.K.,Liljefors, T.,Schousboe, A.,Egebjerg, J.,Gajhede, M.,Kastrup, J.S. Partial agonism and antagonism of the ionotropic glutamate receptor iGLuR5: structures of the ligand-binding core in complex with domoic acid and 2-amino-3-[5-tert-butyl-3-(phosphonomethoxy)-4-isoxazolyl]propionic acid. J.Biol.Chem. 2007 282 25726 25736 2UWS 17570397 X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 6.5 in the charge-separated state 2007-03-23 2007-07-03 Koepke, J.,Krammer, E.M.,Klingen, A.R.,Sebban, P.,Ullmann, G.M.,Fritzsch, G. Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States. J.Mol.Biol. 2007 371 396 0 2UWT 17570397 X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 6.5 in the charge-separated state 2nd dataset 2007-03-23 2007-07-03 Koepke, J.,Krammer, E.M.,Klingen, A.R.,Sebban, P.,Ullmann, G.M.,Fritzsch, G. Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States. J.Mol.Biol. 2007 371 396 0 2UWU 17570397 X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 6.5 in the neutral state, 2nd dataset 2007-03-23 2007-07-03 Koepke, J.,Krammer, E.M.,Klingen, A.R.,Sebban, P.,Ullmann, G.M.,Fritzsch, G. Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States. J.Mol.Biol. 2007 371 396 0 2UWV 17570397 X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 6.5 in the charge-separated state, 3rd dataset 2007-03-23 2007-07-03 Koepke, J.,Krammer, E.M.,Klingen, A.R.,Sebban, P.,Ullmann, G.M.,Fritzsch, G. Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States. J.Mol.Biol. 2007 371 396 0 2UWW 17570397 X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 6.5 in the neutral state 2007-03-23 2007-07-03 Koepke, J.,Krammer, E.M.,Klingen, A.R.,Sebban, P.,Ullmann, G.M.,Fritzsch, G. Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States. J.Mol.Biol. 2007 371 396 0 2UX4 17570397 X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 9 in the charge-separated state, 2nd dataset 2007-03-26 2007-07-03 Koepke, J.,Krammer, E.M.,Klingen, A.R.,Sebban, P.,Ullmann, G.M.,Fritzsch, G. Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States. J.Mol.Biol. 2007 371 396 0 2UXJ 17570397 X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 10 in the neutral state 2007-03-28 2007-07-03 Koepke, J.,Krammer, E.M.,Klingen, A.R.,Sebban, P.,Ullmann, G.M.,Fritzsch, G. Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States. J.Mol.Biol. 2007 371 396 0 2UXK 17570397 X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 10 in the charge-separated state 2007-03-28 2007-07-03 Koepke, J.,Krammer, E.M.,Klingen, A.R.,Sebban, P.,Ullmann, G.M.,Fritzsch, G. Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States. J.Mol.Biol. 2007 371 396 0 2UXM 17570397 X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 10 in the charge-separated state, 2nd dataset 2007-03-28 2007-07-03 Koepke, J.,Krammer, E.M.,Klingen, A.R.,Sebban, P.,Ullmann, G.M.,Fritzsch, G. Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States. J.Mol.Biol. 2007 371 396 0 2PHT 17556509 Pterocarpus angolensis lectin (P L) in complex with Man-7D3 2007-04-12 2007-07-10 Garcia-Pino, A.,Buts, L.,Wyns, L.,Imberty, A.,Loris, R. How a plant lectin recognizes high mannose oligosaccharides Plant Physiol. 2007 144 1733 1741 2PHU 17556509 Pterocarpus angolensis lectin in complex with Man-8D1D3 2007-04-12 2007-07-10 Garcia-Pino, A.,Buts, L.,Wyns, L.,Imberty, A.,Loris, R. How a plant lectin recognizes high mannose oligosaccharides Plant Physiol. 2007 144 1733 1741 2PHW 17556509 Pterocarpus angolensis lectin (PAL) in complex with Man-9 2007-04-12 2007-07-10 Garcia-Pino, A.,Buts, L.,Wyns, L.,Imberty, A.,Loris, R. How a plant lectin recognizes high mannose oligosaccharides Plant Physiol. 2007 144 1733 1741 2PHX 17556509 Pterocarpus angolensis lectin (PAL) in complex with Man-5 2007-04-12 2007-07-10 Garcia-Pino, A.,Buts, L.,Wyns, L.,Imberty, A.,Loris, R. How a plant lectin recognizes high mannose oligosaccharides Plant Physiol. 2007 144 1733 1741 2HHC 17762900 Crystal structure of fucosyltransferase NodZ from Bradyrhizobium 2006-06-28 2007-07-17 Brzezinski, K.,Stepkowski, T.,Panjikar, S.,Bujacz, G.,Jaskolski, M. High-resolution structure of NodZ fucosyltransferase involved in the biosynthesis of the nodulation factor. Acta Biochim.Pol. 2007 54 537 549 2HQU 17880943 Human dUTPase in complex with alpha,beta-iminodUTP and magnesium ion 2006-07-19 2007-07-24 Varga, B.,Barabas, O.,Kovari, J.,Toth, J.,Hunyadi-Gulyas, E.,Klement, E.,Medzihradszky, K.F.,Tolgyesi, F.,Fidy, J.,Vertessy, B.G. Active site closure facilitates juxtaposition of reactant atoms for initiation of catalysis by human dUTPase. Febs Lett. 2007 581 4783 4788 2NNR 17561110 Crystal structure of chagasin, cysteine protease inhibitor from Trypanosoma cruzi 2006-10-24 2007-07-24 Ljunggren, A.,Redzynia, I.,Alvarez-Fernandez, M.,Abrahamson, M.,Mort, J.S.,Krupa, J.C.,Jaskolski, M.,Bujacz, G. Crystal structure of the parasite protease inhibitor chagasin in complex with a host target cysteine protease J.Mol.Biol. 2007 371 137 153 2O7K 17368484 S. aureus thioredoxin 2006-12-11 2007-07-24 Roos, G.,Garcia-Pino, A.,Van Belle, K.,Brosens, E.,Wahni, K.,Vandenbussche, G.,Wyns, L.,Loris, R.,Messens, J. The conserved active site proline determines the reducing power of Staphylococcus aureus thioredoxin J.Mol.Biol. 2007 368 800 811 2P5Q 17531267 Crystal structure of the poplar glutathione peroxidase 5 in the reduced form 2007-03-16 2007-07-24 Koh, C.S.,Didierjean, C.,Navrot, N.,Panjikar, S.,Mulliert, G.,Rouhier, N.,Jacquot, J.P.,Aubry, A.,Shawkataly, O.,Corbier, C. Crystal Structures of a Poplar Thioredoxin Peroxidase that Exhibits the Structure of Glutathione Peroxidases: Insights into Redox-driven Conformational Changes. J.Mol.Biol. 2007 370 512 529 2HR6 17932923 Crystal structure of dUTPase in complex with substrate analogue dUDP and manganese 2006-07-19 2007-07-31 Kovari, J.,Barabas, O.,Varga, B.,Bekesi, A.,Tolgyesi, F.,Fidy, J.,Nagy, J.,Vertessy, B.G. Methylene substitution at the alpha-beta bridging position within the phosphate chain of dUDP profoundly perturbs ligand accommodation into the dUTPase active site. Proteins 2008 71 308 319 2V6C 17690690 Crystal structure of ErbB3 binding protein 1 (Ebp1) 2007-07-16 2007-08-21 Monie, T.P.,Perrin, A.J.,Birtley, J.R.,Sweeney, T.R.,Karakasiliotis, I.,Chaudry, Y.,Roberts, L.O.,Matthews, S.,Goodfellow, I.G.,Curry, S. Structural Insights Into the Transcriptional and Translational Roles of Ebp1 Embo J. 2007 26 3936 0 2OMX 17715295 Crystal structure of InlA S192N G194S+S/hEC1 complex 2007-01-23 2007-08-28 Wollert, T.,Heinz, D.W.,Schubert, W.D. Thermodynamically reengineering the listerial invasion complex InlA/E-cadherin. Proc.Natl.Acad.Sci.Usa 2007 104 13960 13965 2POC 17681543 The crystal structure of isomerase domain of glucosamine-6-phosphate synthase from Candida albicans 2007-04-26 2007-09-11 Raczynska, J.,Olchowy, J.,Konariev, P.V.,Svergun, D.I.,Milewski, S.,Rypniewski, W. The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans J.Mol.Biol. 2007 372 672 688 2PUT 17681543 The crystal structure of isomerase domain of glucosamine-6-phosphate synthase from Candida albicans 2007-05-09 2007-09-11 Raczynska, J.,Olchowy, J.,Konariev, P.V.,Svergun, D.I.,Milewski, S.,Rypniewski, W. The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans J.Mol.Biol. 2007 372 672 688 2PUV 17681543 The crystal structure of isomerase domain of glucosamine-6-phosphate synthase from Candida albicans 2007-05-09 2007-09-11 Raczynska, J.,Olchowy, J.,Konariev, P.V.,Svergun, D.I.,Milewski, S.,Rypniewski, W. The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans J.Mol.Biol. 2007 372 672 688 2PUW 17681543 The crystal structure of isomerase domain of glucosamine-6-phosphate synthase from Candida albicans 2007-05-09 2007-09-11 Raczynska, J.,Olchowy, J.,Konariev, P.V.,Svergun, D.I.,Milewski, S.,Rypniewski, W. The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans J.Mol.Biol. 2007 372 672 688 2J4X 17900619 Streptococcus dysgalactiae-derived mitogen (SDM) 2006-09-07 2007-09-25 Saarinen, S.,Kato, H.,Uchiyama, T.,Miyoshi-Akiyama, T.,Papageorgiou, A.C. Crystal Structure of Streptococcus Dysgalactiae-Derived Mitogen Reveals a Zinc-Binding Site and Alterations in Tcr Binding. J.Mol.Biol. 2007 373 1089 0 2IQ5 Unliganded Crystal Structure of the Uridine Phosphorylase from Salmonella Typhimurium at 1.90 A Resolution 2006-10-13 2007-10-16 Timofeev, V.I.,Dontsova, M.V.,Gabdoulkhakov, A.G.,Lashkov, A.A.,Voelter, V.,Kachalova, G.S.,Pavlyuk, B.P.,Mikhailov, A.M. Unliganded Crystal Structure of the Uridine Phosphorylase from Salmonella Typhimurium at 1.90 A Resolution To be Published 0 0 0 0 2OQR 17942407 The structure of the response regulator RegX3 from Mycobacterium tuberculosis 2007-02-01 2007-10-16 King-Scott, J.,Nowak, E.,Mylonas, E.,Panjikar, S.,Roessle, M.,Svergun, D.I.,Tucker, P.A. The Structure of a Full-length Response Regulator from Mycobacterium tuberculosis in a Stabilized Three-dimensional Domain-swapped, Activated State. J.Biol.Chem. 2007 282 37717 37729 2Q2R 17761195 Trypanosoma cruzi glucokinase in complex with beta-D-glucose and ADP 2007-05-29 2007-10-16 Cordeiro, A.T.,Caceres, A.J.,Vertommen, D.,Concepcion, J.L.,Michels, P.A.,Versees, W. The Crystal Structure of Trypanosoma cruzi Glucokinase Reveals Features Determining Oligomerization and Anomer Specificity of Hexose-phosphorylating Enzymes. J.Mol.Biol. 2007 372 1215 1226 2O31 17784760 Crystal structure of the second SH3 domain from ponsin 2006-11-30 2007-10-23 Margiolaki, I.,Wright, J.P.,Wilmanns, M.,Fitch, A.N.,Pinotsis, N. Second SH3 domain of ponsin solved from powder diffraction J.Am.Chem.Soc. 2007 129 11865 11871 2Q5J 17905741 X-ray structure of phenylpyruvate decarboxylase in complex with 3-deaza-ThDP 2007-06-01 2007-10-23 Versees, W.,Spaepen, S.,Wood, M.D.,Leeper, F.J.,Vanderleyden, J.,Steyaert, J. Molecular mechanism of allosteric substrate activation in a thiamine diphosphate-dependent decarboxylase. J.Biol.Chem. 2007 282 35269 35278 2Q5L 17905741 X-ray structure of phenylpyruvate decarboxylase in complex with 2-(1-hydroxyethyl)-3-deaza-ThDP 2007-06-01 2007-10-23 Versees, W.,Spaepen, S.,Wood, M.D.,Leeper, F.J.,Vanderleyden, J.,Steyaert, J. Molecular mechanism of allosteric substrate activation in a thiamine diphosphate-dependent decarboxylase. J.Biol.Chem. 2007 282 35269 35278 2Q5O 17905741 X-ray structure of phenylpyruvate decarboxylase in complex with 3-deaza-ThDP and phenylpyruvate 2007-06-01 2007-10-23 Versees, W.,Spaepen, S.,Wood, M.D.,Leeper, F.J.,Vanderleyden, J.,Steyaert, J. Molecular mechanism of allosteric substrate activation in a thiamine diphosphate-dependent decarboxylase. J.Biol.Chem. 2007 282 35269 35278 2I7D Structure of Human cytosolic deoxyribonucleotidase in complex with deoxyuridine, AlF4 and Mg2+ 2006-08-30 2007-10-30 Wallden, K.,Rinaldo-Matthis, A.,Ruzzenente, B.,Rampazzo, C.,Bianchi, V.,Nordlund, P. Structures of Human and Murine cytosolic deoxyribonucleotidase: Insights into substrate specificity and catalysis To be Published 0 0 0 0 2O9S 17462669 The second SH3 domain from ponsin 2006-12-14 2007-10-30 Gehmlich, K.,Pinotsis, N.,Hayess, K.,van der Ven, P.F.,Milting, H.,El Banayosy, A.,Wilmanns, M.,Ehler, E. Paxillin and ponsin interact in nascent costameres of muscle cells J.Mol.Biol. 2007 369 665 682 2O9V 17462669 The second SH3 domain from Ponsin in complex with the paxillin proline rich region 2006-12-14 2007-10-30 Gehmlich, K.,Pinotsis, N.,Hayess, K.,van der Ven, P.F.,Milting, H.,El Banayosy, A.,Wilmanns, M.,Ehler, E. Paxillin and ponsin interact in nascent costameres of muscle cells J.Mol.Biol. 2007 369 665 682 2JAW 17985935 Crystal structure of D41N variant of human mitochondrial 5'(3')- deoxyribonucleotidase (mdN) in complex with 5-bromovinyldeoxyuridine 5'-monophosphate 2006-11-30 2007-11-20 Wallden, K.,Rinaldo-Matthis, A.,Ruzzenente, B.,Rampazzo, C.,Bianchi, V.,Nordlund, P. Crystal Structures of Human and Murine Deoxyribonucleotidases: Insights Into Recognition of Substrates and Nucleotide Analogues. Biochemistry 2007 46 13809 0 2IHU 19477162 Carboxyethylarginine synthase from Streptomyces clavuligerus: putative reaction intermediate complex 2006-09-27 2007-11-27 Caines, M.E.,Sorensen, J.L.,Schofield, C.J. Structural and mechanistic studies on N(2)-(2-carboxyethyl)arginine synthase. Biochem.Biophys.Res.Commun. 2009 385 512 517 2V29 18085797 L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT K15W) 2007-06-04 2008-01-08 Grueninger, D.,Schulz, G.E. Antenna Domain Mobility and Enzymatic Reaction of L-Rhamnulose-1-Phosphate Aldolase. Biochemistry 2008 47 607 0 2QNO 18035374 Crystal Structure of the Mutant E55Q of the Cellulase CEL48F in Complex with a Thio-Oligosaccharide 2007-07-19 2008-01-15 Parsiegla, G.,Reverbel, C.,Tardif, C.,Driguez, H.,Haser, R. Structures of mutants of cellulase Cel48F of Clostridium cellulolyticum in complex with long hemithiocellooligosaccharides give rise to a new view of the substrate pathway during processive action J.Mol.Biol. 2008 375 499 510 2UYU 18187656 L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT A88F- E192A) 2007-04-20 2008-01-15 Grueninger, D.,Treiber, N.,Ziegler, M.O.P.,Koetter, J.W.A.,Schulze, M.-S.,Schulz, G.E. Designed Protein-Protein Association. Science 2008 319 206 0 2UYV 18187656 L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT Q6Y- E192A) 2007-04-20 2008-01-15 Grueninger, D.,Treiber, N.,Ziegler, M.O.P.,Koetter, J.W.A.,Schulze, M.-S.,Schulz, G.E. Designed Protein-Protein Association. Science 2008 319 206 0 2V9L 18187656 L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT Q6Y- E192A) 2007-08-24 2008-01-15 Grueninger, D.,Treiber, N.,Ziegler, M.O.P.,Koetter, J.W.A.,Schulze, M.-S.,Schulz, G.E. Designed Protein-Protein Association. Science 2008 319 206 0 2V9M 18187656 L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT A87M- T109F-E192A) 2007-08-24 2008-01-15 Grueninger, D.,Treiber, N.,Ziegler, M.O.P.,Koetter, J.W.A.,Schulze, M.-S.,Schulz, G.E. Designed Protein-Protein Association. Science 2008 319 206 0 2V9N 18187656 L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT A88F- E192A) 2007-08-24 2008-01-15 Grueninger, D.,Treiber, N.,Ziegler, M.O.,Koetter, J.W.,Schulze, M.S.,Schulz, G.E. Designed protein-protein association. Science 2008 319 206 209 2V9G 18187656 L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT Q6Y- L84W-E192A) 2007-08-23 2008-01-22 Grueninger, D.,Treiber, N.,Ziegler, M.O.P.,Koetter, J.W.A.,Schulze, M.-S.,Schulz, G.E. Designed Protein-Protein Association. Science 2008 319 206 0 2V9O 18187656 L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT A87M- T109F-E192A) 2007-08-24 2008-01-22 Grueninger, D.,Treiber, N.,Ziegler, M.O.P.,Koetter, J.W.A.,Schulze, M.-S.,Schulz, G.E. Designed Protein-Protein Association. Science 2008 319 206 0 2R15 18059477 Crystal structure of the myomesin domains 12 and 13 2007-08-22 2008-01-29 Pinotsis, N.,Lange, S.,Perriard, J.C.,Svergun, D.I.,Wilmanns, M. Molecular basis of the C-terminal tail-to-tail assembly of the sarcomeric filament protein myomesin. Embo J. 2008 27 253 264 2OR9 18473392 The structure of the anti-c-myc antibody 9E10 Fab fragment/epitope peptide complex reveals a novel binding mode dominated by the heavy chain hypervariable loops 2007-02-02 2008-02-12 Krauss, N.,Wessner, H.,Welfle, K.,Welfle, H.,Scholz, C.,Seifert, M.,Zubow, K.,Ay, J.,Hahn, M.,Scheerer, P.,Skerra, A.,Hohne, W. The structure of the anti-c-myc antibody 9E10 Fab fragment/epitope peptide complex reveals a novel binding mode dominated by the heavy chain hypervariable loops. Proteins 2008 73 552 565 2ORB 18473392 The structure of the anti-c-myc antibody 9E10 Fab fragment 2007-02-02 2008-02-12 Krauss, N.,Wessner, H.,Welfle, K.,Welfle, H.,Scholz, C.,Seifert, M.,Zubow, K.,Ay, J.,Hahn, M.,Scheerer, P.,Skerra, A.,Hohne, W. The structure of the anti-c-myc antibody 9E10 Fab fragment/epitope peptide complex reveals a novel binding mode dominated by the heavy chain hypervariable loops. Proteins 2008 73 552 565 2VHD 18217775 Crystal Structure Of The Di-Haem Cytochrome C Peroxidase From Pseudomonas aeruginosa - Mixed Valence Form 2007-11-20 2008-02-12 Echalier, A.,Brittain, T.,Wright, J.,Boycheva, S.,Mortuza, G.B.,Fulop, V.,Watmough, N.J. Redox-Linked Structural Changes Associated with the Formation of a Catalytically Competent Form of the Diheme Cytochrome C Peroxidase from Pseudomonas Aeruginosa Biochemistry 2008 47 1947 0 2R9Z 17977556 Glutathione amide reductase from Chromatium gracile 2007-09-14 2008-02-19 Van Petegem, F.,De Vos, D.,Savvides, S.,Vergauwen, B.,Van Beeumen, J. Understanding nicotinamide dinucleotide cofactor and substrate specificity in class I flavoprotein disulfide oxidoreductases: crystallographic analysis of a glutathione amide reductase. J.Mol.Biol. 2007 374 883 889 2R9Z 17977556 Glutathione amide reductase from Chromatium gracile 2007-09-14 2008-02-19 Van Petegem, F.,De Vos, D.,Savvides, S.,Vergauwen, B.,Van Beeumen, J. Understanding nicotinamide dinucleotide cofactor and substrate specificity in class I flavoprotein disulfide oxidoreductases: crystallographic analysis of a glutathione amide reductase. J.Mol.Biol. 2007 374 883 889 3BQF 18255097 Structure of the central domain (MsrA) of Neisseria meningitidis PilB (complex with a substrate) 2007-12-20 2008-02-19 Ranaivoson, F.M.,Antoine, M.,Kauffmann, B.,Boschi-Muller, S.,Aubry, A.,Branlant, G.,Favier, F. A structural analysis of the catalytic mechanism of methionine sulfoxide reductase A from Neisseria meningitidis J.Mol.Biol. 2008 377 268 280 2QTY 18323597 Crystal Structure of mouse ADP-ribosylhydrolase 3 (mARH3) 2007-08-03 2008-03-04 Mueller-Dieckmann, C.,Kernstock, S.,Mueller-Dieckmann, J.,Weiss, M.S.,Koch-Nolte, F. Structure of mouse ADP-ribosylhydrolase 3 (mARH3). Acta Crystallogr.,Sect.F 2008 64 156 162 2RCK 18291417 Crystal structure of juvenile hormone binding protein from Galleria mellonella hemolymph 2007-09-20 2008-03-04 Kolodziejczyk, R.,Bujacz, G.,Jakob, M.,Ozyhar, A.,Jaskolski, M.,Kochman, M. Insect Juvenile Hormone Binding Protein Shows Ancestral Fold Present in Human Lipid-Binding Proteins. J.Mol.Biol. 2008 377 870 881 2QQV 18258263 Crystal structure of a cell-wall invertase (E203A) from Arabidopsis thaliana in complex with sucrose 2007-07-27 2008-04-22 Lammens, W.,Le Roy, K.,Van Laere, A.,Rabijns, A.,Van den Ende, W. Crystal structures of Arabidopsis thaliana cell-wall invertase mutants in complex with sucrose. J.Mol.Biol. 2008 377 378 385 3B9G 18519562 Crystal structure of loop deletion mutant of Trypanosoma vivax nucleoside hydrolase (3GTvNH) in complex with ImmH 2007-11-05 2008-04-22 Vandemeulebroucke, A.,De Vos, S.,Van Holsbeke, E.,Steyaert, J.,Versees, W. A Flexible Loop as a Functional Element in the Catalytic Mechanism of Nucleoside Hydrolase from Trypanosoma vivax. J.Biol.Chem. 2008 283 22272 22282 2UUS 18540049 Crystal structure of the rat FGF1-sucrose octasulfate (SOS) complex. 2007-03-07 2008-05-13 Kulahin, N.,Kiselyov, V.,Kochoyan, A.,Kristensen, O.,Kastrup, J.S.,Berezin, V.,Bock, E.,Gajhede, M. Dimerization Effect of Sucrose Octasulfate on Rat Fgf1. Acta Crystallogr.,Sect.F 2008 64 448 0 2V1R Yeast Pex13 SH3 domain complexed with a peptide from Pex14 at 2.1 A resolution 2007-05-29 2008-06-03 Kursula, P.,Kursula, I.,Pinotsis, N.,Lehmann, F.,Zou, P.,Song, Y.H.,Wilmanns, M. Structural Genomics of Yeast SH3 Domains To be Published 0 0 0 0 3C6Y 18524775 HNL from Hevea brasiliensis to atomic resolution 2008-02-06 2008-06-03 Schmidt, A.,Gruber, K.,Kratky, C.,Lamzin, V.S. Atomic resolution crystal structures and quantum chemistry meet to reveal subtleties of hydroxynitrile lyase catalysis J.Biol.Chem. 2008 283 21827 21836 2VUE 18602119 Human serum albumin complexed with 4Z,15E-bilirubin-IX-alpha 2008-05-24 2008-06-17 Zunszain, P.A.,Ghuman, J.,Mcdonagh, A.F.,Curry, S. Crystallographic Analysis of Human Serum Albumin Complexed with 4Z,15E-Bilirubin-Ixalpha. J.Mol.Biol. 2008 381 394 0 3BZ5 18343406 Functional domain of InlJ from Listeria monocytogenes includes a cysteine ladder 2008-01-17 2008-06-17 Bublitz, M.,Holland, C.,Sabet, C.,Reichelt, J.,Cossart, P.,Heinz, D.W.,Bierne, H.,Schubert, W.D. Crystal structure and standardized geometric analysis of InlJ, a listerial virulence factor and leucine-rich repeat protein with a novel cysteine ladder. J.Mol.Biol. 2008 378 87 96 2V35 18019537 Porcine Pancreatic Elastase in complex with inhibitor JM54 2007-06-12 2008-06-24 Mulchande, J.,Martins, L.,Moreira, R.,Archer, M.,Oliveira, T.F.,Iley, J. The Efficiency of C-4 Substituents in Activating the Beta-Lactam Scaffold Towards Serine Proteases and Hydroxide Ion. Org.Biomol.Chem. 2007 5 2617 0 2Z70 18305191 E.coli RNase 1 in complex with d(CGCGATCGCG) 2007-08-09 2008-06-24 Rodriguez, S.M.,Panjikar, S.,Van Belle, K.,Wyns, L.,Messens, J.,Loris, R. Nonspecific base recognition mediated by water bridges and hydrophobic stacking in ribonuclease I from Escherichia coli Protein Sci. 2008 17 681 690 2QDK X-ray structure of the unliganded uridine phosphorylase from Salmonella typhimurium at 1.62A resolution 2007-06-21 2008-07-01 Timofeev, V.I.,Pavlyuk, B.P.,Lashkov, A.A.,Gabdoulkhakov, A.G.,Mikhailov, A.M. X-ray structure of the unliganded uridine phosphorylase from Salmonella typhimurium at 1.62A resolution To be Published 0 0 0 0 2VJ1 18559270 A Structural View of the Inactivation of the SARS-Coronavirus Main Proteinase by Benzotriazole Esters 2007-12-06 2008-07-01 Verschueren, K.H.G.,Pumpor, K.,Anemueller, S.,Chen, S.,Mesters, J.R.,Hilgenfeld, R. A Structural View of the Inactivation of the Sars Coronavirus Main Proteinase by Benzotriazole Esters. Chem.Biol. 2008 15 597 0 3D21 18552403 Crystal structure of a poplar wild-type thioredoxin h, PtTrxh4 2008-05-07 2008-07-01 Koh, C.S.,Navrot, N.,Didierjean, C.,Rouhier, N.,Hirasawa, M.,Knaff, D.B.,Wingsle, G.,Samian, R.,Jacquot, J.P.,Corbier, C.,Gelhaye, E. An Atypical Catalytic Mechanism Involving Three Cysteines of Thioredoxin. J.Biol.Chem. 2008 283 23062 23072 2QLN Glycogen Phosphorylase b in complex with N-4-phenylbenzoyl-N'-beta-D-glucopyranosyl urea 2007-07-13 2008-07-15 Nagy, V.,Felf ldi, N.,Praly, J.-P.,Dosca, T.,Gergerly, P.,Chrysina, E.D.,Tiraidis, C.,Kosmopoulou, M.N.,Alexacou, K.-M.,Konstantakaki, M. N-(4-substituted-benzoyl)-N'-(beta-D-glucopyranosyl)ureas, inhibitors of glycogen phosphorylase: synthesis, kinetic and crystallographic evaluation To be Published 0 0 0 0 2QN8 Glycogen Phosphorylase b in complex with N-4-nitrobenzoyl-N'-beta-D-glucopyranosyl urea 2007-07-18 2008-07-22 Nagy, V.,Felf ldi, N.,Praly, J.-P.,Dosca, T.,Gergerly, P.,Chrysina, E.D.,Tiraidis, C.,Kosmopoulou, M.N.,Alexacou, K.-M.,Konstantakaki, M. N-(4-substituted-benzoyl)-N'-(beta-D-glucopyranosyl)ureas, inhibitors of glycogen phosphorylase: synthesis, kinetic and crystallographic evaluation To be Published 0 0 0 0 2JK0 18647344 Structural and functional insights into Erwinia carotovora L- asparaginase 2008-05-23 2008-08-05 Papageorgiou, A.C.,Posypanova, G.A.,Andersson, C.S.,Sokolov, N.N.,Krasotkina, J. Structural and Functional Insights Into Erwinia Carotovora L-Asparaginase. FEBS J. 2008 275 4306 0 2VL2 18489898 Oxidized and reduced forms of human peroxiredoxin 5 2008-01-08 2008-08-26 Smeets, A.,Marchand, C.,Linard, D.,Knoops, B.,Declercq, J.P. The Crystal Structures of Oxidized Forms of Human Peroxiredoxin 5 with an Intramolecular Disulfide Bond Confirm the Proposed Enzymatic Mechanism for Atypical 2-Cys Peroxiredoxins. Arch.Biochem.Biophys. 2008 477 98 0 2VL3 18489898 Oxidized and reduced forms of human peroxiredoxin 5 2008-01-08 2008-08-26 Smeets, A.,Marchand, C.,Linard, D.,Knoops, B.,Declercq, J.P. The Crystal Structures of Oxidized Forms of Human Peroxiredoxin 5 with an Intramolecular Disulfide Bond Confirm the Proposed Enzymatic Mechanism for Atypical 2-Cys Peroxiredoxins. Arch.Biochem.Biophys. 2008 477 98 0 2VTV 18706425 PhaZ7 depolymerase from Paucimonas lemoignei 2008-05-16 2008-08-26 Papageorgiou, A.C.,Hermawan, S.,Singh, C.B.,Jendrossek, D. Structural basis of poly(3-hydroxybutyrate) hydrolysis by PhaZ7 depolymerase from Paucimonas lemoignei. J. Mol. Biol. 2008 382 1184 1194 2JKX 15239055 Galactose oxidase. MatGO. Copper free, expressed in Pichia Pastoris. 2008-09-01 2008-09-09 Deacon, S.E.,Mahmoud, K.,Spooner, R.K.,Firbank, S.J.,Knowles, P.F.,Phillips, S.E.V.,McPherson, M.J. Enhanced Fructose Oxidase Activity in a Galactose Oxidase Variant Chembiochem 2004 5 972 0 3CZW 18658118 X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex 2008-04-30 2008-09-09 Rypniewski, W.,Adamiak, D.A.,Milecki, J.,Adamiak, R.W. Noncanonical G(syn)-G(anti) base pairs stabilized by sulphate anions in two X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex. Rna 2008 14 1845 1851 2RFZ 18499583 Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellotriose 2007-10-02 2008-09-16 Parkkinen, T.,Koivula, A.,Rouvinen, J. Crystal structures of Melanocarpus albomyces cellobiohydrolase Cel7B in complex with cello-oligomers show high flexibility in the substrate binding Protein Sci. 2008 17 1383 1394 2RG0 18499583 Crystal structure of cellobiohydrolase from Melanocarpus albomyces complexed with cellotetraose 2007-10-02 2008-09-16 Parkkinen, T.,Koivula, A.,Rouvinen, J. Crystal structures of Melanocarpus albomyces cellobiohydrolase Cel7B in complex with cello-oligomers show high flexibility in the substrate binding Protein Sci. 2008 17 1383 1394 2VAQ 18081287 STRUCTURE OF STRICTOSIDINE SYNTHASE IN COMPLEX WITH INHIBITOR 2007-09-04 2008-09-16 Maresh, J.J.,Giddings, L.A.,Friedrich, A.,Loris, E.A.,Panjikar, S.,Trout, B.L.,Stockigt, J.,Peters, B.,O'Connor, S.E. Strictosidine synthase: mechanism of a Pictet-Spengler catalyzing enzyme. J. Am. Chem. Soc. 2008 130 710 723 2RJ3 Crystal Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with Uracil and Phosphate Ion at 2.49A Resolution 2007-10-14 2008-10-14 Timofeev, V.I.,Pavlyuk, B.P.,Lashkov, A.A.,Gabdoulkhakov, A.G.,Mikhailov, A.M. Crystal Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with Uracil and Phosphate Ion at 2.49A Resolution To be published 0 0 0 0 2VU0 19016856 Biosynthetic thiolase from Z. ramigera. Complex of the oxidised enzyme with coenzyme A. 2008-05-19 2008-10-28 Merilainen, G.,Schmitz, W.,Wierenga, R.K.,Kursula, P. The sulfur atoms of the substrate CoA and the catalytic cysteine are required for a productive mode of substrate binding in bacterial biosynthetic thiolase, a thioester-dependent enzyme. FEBS J. 2008 275 6136 6148 3BFT 18269227 Structure of the ligand-binding core of GluR2 in complex with the agonist (S)-TDPA at 2.25 A resolution 2007-11-23 2008-10-28 Beich-Frandsen, M.,Pickering, D.S.,Mirza, O.,Johansen, T.N.,Greenwood, J.,Vestergaard, B.,Schousboe, A.,Gajhede, M.,Liljefors, T.,Kastrup, J.S. Structures of the ligand-binding core of iGluR2 in complex with the agonists (R)- and (S)-2-amino-3-(4-hydroxy-1,2,5-thiadiazol-3-yl)propionic acid explain their unusual equipotency. J.Med.Chem. 2008 51 1459 1463 3D2D 18953357 Structure of berberine bridge enzyme in complex with (S)-reticuline 2008-05-08 2008-10-28 Winkler, A.,Lyskowski, A.,Riedl, S.,Puhl, M.,Kutchan, T.M.,Macheroux, P.,Gruber, K. A concerted mechanism for berberine bridge enzyme Nat.Chem.Biol. 2008 4 739 741 3BCS Glycogen Phosphorylase complex with 1(-D-glucopyranosyl) uracil 2007-11-13 2008-11-18 Cisma, C.,Sovantzis, D.A.,Hadjiloi, T.,Stathis, D.,Gimisis, T.,Hayes, J.M.,Zographos, S.E.,Leonidas, D.D.,Chrysina, E.D.,Oikonomakos, N.G. D-Glucopyranosyl pyrimidine nucleoside binding to muscle glycogen phosphorylase b To be Published 0 0 0 0 3BCU Glucogen Phosphorylase complex with thymidine 2007-11-13 2008-11-18 Cisma, C.,Sovantzis, D.A.,Hadjiloi, T.,Stathis, D.,Gimisis, T.,Hayes, J.M.,Zographos, S.E.,Leonidas, D.D.,Chrysina, E.D.,Oikonomakos, N.G. D-Glucopyranosyl pyrimidine nucleoside binding to muscle glycogen phosphorylase b To be Published 0 0 0 0 3BD6 Glycogen Phosphorylase complex with 1(-D-ribofuranosyl) cyanuric acid 2007-11-14 2008-11-18 Cisma, C.,Sovantzis, D.A.,Hadjiloi, T.,Stathis, D.,Gimisis, T.,Hayes, J.M.,Zographos, S.E.,Leonidas, D.D.,Chrysina, E.D.,Oikonomakos, N.G. D-Glucopyranosyl pyrimidine nucleoside binding to muscle glycogen phosphorylase b To be Published 0 0 0 0 3BD7 Glycogen Phosphorylase complex with 1(-D-glucopyranosyl) thymine 2007-11-14 2008-11-18 Cisma, C.,Sovantzis, D.A.,Hadjiloi, T.,Stathis, D.,Gimisis, T.,Hayes, J.M.,Zographos, S.E.,Leonidas, D.D.,Chrysina, E.D.,Oikonomakos, N.G. D-Glucopyranosyl pyrimidine nucleoside binding to muscle glycogen phosphorylase b To be Published 0 0 0 0 3BD8 Glucogen Phosphorylase complex with 1(-D-glucopyranosyl) cytosine 2007-11-14 2008-11-18 Cisma, C.,Sovantzis, D.A.,Hadjiloi, T.,Stathis, D.,Gimisis, T.,Hayes, J.M.,Zographos, S.E.,Leonidas, D.D.,Chrysina, E.D.,Oikonomakos, N.G. D-Glucopyranosyl pyrimidine nucleoside binding to muscle glycogen phosphorylase b To be Published 0 0 0 0 3BDA Glycogen Phosphorylase complex with 1(-D-glucopyranosyl) cyanuric acid 2007-11-14 2008-11-18 Cisma, C.,Sovantzis, D.A.,Hadjiloi, T.,Stathis, D.,Gimisis, T.,Hayes, J.M.,Zographos, S.E.,Leonidas, D.D.,Chrysina, E.D.,Oikonomakos, N.G. D-Glucopyranosyl pyrimidine nucleoside binding to muscle glycogen phosphorylase b To be Published 0 0 0 0 3EDC 19004002 Crystal Structure of a 1.6-hexanediol Bound Tetrameric Form of Escherichia coli Lac-repressor Refined to 2.1 Resolution 2008-09-03 2008-11-25 Stenberg, K.A.E.,Vihinen, M. Crystal structure of a 1.6-hexanediol bound tetrameric form of Escherichia coli lac-repressor refined to 2.1 A resolution Proteins 2009 75 748 759 2VO4 19014949 Glutathione transferase from Glycine max 2008-02-08 2008-12-02 Axarli, I.,Dhavala, P.,Papageorgiou, A.C.,Labrou, N.E. Crystallographic and Functional Characterization of the Fluorodifen-Inducible Glutathione Transferase from Glycine Max Reveals an Active Site Topography Suited for Diphenylether Herbicides and a Novel L-Site. J.Mol.Biol. 2009 385 984 0 2JJ9 19122661 Crystal structure of myosin-2 in complex with ADP-metavanadate 2008-03-25 2009-01-13 Fedorov, R.,Bohl, M.,Tsiavaliaris, G.,Hartmann, F.K.,Taft, M.H.,Baruch, P.,Brenner, B.,Martin, R.,Knolker, H.,Gutzeit, H.O.,Manstein, D.J. The Mechanism of Pentabromopseudilin Inhibition of Myosin Motor Activity. Nat.Struct.Mol.Biol. 2009 16 80 0 2VK4 Crystal structure of pyruvate decarboxylase from Kluyveromyces lactis 2007-12-17 2009-01-27 Konig, S.,Spinka, M.,Kutter, S. Allosteric Activation of Pyruvate Decarboxylases. A Never-Ending Story. J.Mol.Catal., B Enzym. 2014 61 100 0 3FZ9 19158074 Crystal structure of poplar glutaredoxin S12 in complex with glutathione 2009-01-24 2009-02-24 Couturier, J.,Koh, C.S.,Zaffagnini, M.,Winger, A.M.,Gualberto, J.M.,Corbier, C.,Decottignies, P.,Jacquot, J.P.,Lemaire, S.D.,Didierjean, C.,Rouhier, N. Structure-function relationship of the chloroplastic glutaredoxin S12 with an atypical WCSYS active site. J.Biol.Chem. 2009 284 9299 9310 3E85 19220853 Crystal Structure of Pathogenesis-related Protein LlPR-10.2B from yellow lupine in complex with Diphenylurea 2008-08-19 2009-03-03 Fernandes, H.,Bujacz, A.,Bujacz, G.,Jelen, F.,Jasinski, M.,Kachlicki, P.,Otlewski, J.,Sikorski, M.M.,Jaskolski, M. Cytokinin-induced structural adaptability of a Lupinus luteus PR-10 protein. Febs J. 2009 276 1596 1609 3G8F Crystal structure of the complex formed between a group II phospholipase A2 and designed peptide inhibitor carbobenzoxy-dehydro-val-ala-arg-ser at 1.2 A resolution 2009-02-12 2009-03-10 Singh, N.,Kaur, P.,Prem Kumar, R.,Somvanshi, R.K.,Perband, M.,Betzel, C.,Dey, S.,Sharma, S.,Singh, T.P. Crystal Structure of the Complex Formed between a Group II Phospholipase A2 and Designed Peptide Inhibitor Carbobenzoxy-Dehydro-Val-Ala-Arg-Ser at 1.2 A Resolution To be Published 0 0 0 0 3DIE 19071139 Domain swapping of Staphylococcus Aureus thioredoxin W28A mutant 2008-06-20 2009-03-24 Garcia-Pino, A.,Martinez-Rodriguez, S.,Wahni, K.,Wyns, L.,Loris, R.,Messens, J. Coupling of domain swapping to kinetic stability in a thioredoxin mutant J.Mol.Biol. 2009 385 1590 1599 3EPX 19281874 Crystal structure of Trypanosoma vivax nucleoside hydrolase in complex with the inhibitor (2R,3R,4S)-2-(hydroxymethyl)-1-(quinolin-8-ylmethyl)pyrrolidin-3,4-diol 2008-09-30 2009-03-24 Versees, W.,Goeminne, A.,Berg, M.,Vandemeulebroucke, A.,Haemers, A.,Augustyns, K.,Steyaert, J. Crystal structures of T. vivax nucleoside hydrolase in complex with new potent and specific inhibitors. Biochim.Biophys.Acta 2009 1794 953 960 3GDP 19256550 Hydroxynitrile lyase from almond, monoclinic crystal form 2009-02-24 2009-03-24 Dreveny, I.,Andryushkova, A.S.,Glieder, A.,Gruber, K.,Kratky, C. Substrate binding in the FAD-dependent hydroxynitrile lyase from almond provides insight into the mechanism of cyanohydrin formation and explains the absence of dehydrogenation activity. Biochemistry 2009 48 3370 3377 2W78 19504741 Structures of P. aeruginosa FpvA bound to heterologous pyoverdines: FpvA-Pvd(ATCC13535)-Fe complex 2008-12-20 2009-05-12 Greenwald, J.,Nader, M.,Celia, H.,Gruffaz, C.,Geoffroy, V.,Meyer, J.-M.,Schalk, I.J.,Pattus, F. Fpva Bound to Non-Cognate Pyoverdines: Molecular Basis of Siderophore Recognition by an Iron Transporter. Mol.Microbiol. 2009 72 1246 0 3DDO X-RAY Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with by Phosphate Ion at 1.5A Resolution 2008-06-06 2009-06-09 Lashkov, A.A.,Mikhailov, A.M.,Gabdoulkhakov, A.G. X-RAY Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with by Phosphate Ion at 1.5A Resolution To be Published 0 0 0 0 3GOV 19564340 Crystal structure of the catalytic region of human MASP-1 2009-03-20 2009-06-09 Dobo, J.,Harmat, V.,Beinrohr, L.,Sebestyen, E.,Zavodszky, P.,Gal, P. MASP-1, a promiscuous complement protease: structure of its catalytic region reveals the basis of its broad specificity. J.Immunol. 2009 183 1207 1214 3H0C Crystal Structure of Human Dipeptidyl Peptidase IV (CD26) in Complex with a Reversed Amide Inhibitor 2009-04-09 2009-06-09 Nordhoff, S.,Cerezo-Galvez, S.,Deppe, H.,Hill, O.,Lopez-Canet, M.,Rummey, C.,Thiemann, M.,Matassa, V.G.,Edwards, P.J.,Feurer, A. Discovery of b-homophenylalanine based pyrrolidin-2-ylmethyl amides and sulfonamides as highly potent and selective inhibitors of dipeptidyl peptidase IV To be Published 0 0 0 0 3D6G 19924842 Fc fragment of IgG1 (Herceptin) with protein-A mimetic peptide dendrimer ligand. 2008-05-19 2009-06-16 Moiani, D.,Salvalaglio, M.,Cavallotti, C.,Bujacz, A.,Redzynia, I.,Bujacz, G.,Dinon, F.,Pengo, P.,Fassina, G. Structural characterization of a Protein A mimetic peptide dendrimer bound to human IgG. J.Phys.Chem.B 2009 113 16268 16275 3DJQ 19643512 Bovine Seminal Ribonuclease- Uridine 5' diphosphate complex 2008-06-24 2009-06-30 Dossi, K.,Tsirkone, V.G.,Hayes, J.M.,Matousek, J.,Pouckova, P.,Soucek, J.,Zadinova, M.,Zographos, S.E.,Leonidas, D.D. Mapping the ribonucleolytic active site of bovine seminal ribonuclease. The binding of pyrimidinyl phosphonucleotide inhibitors Eur.J.Med.Chem. 2009 44 4496 4508 3HBV 19558324 PrtC methionine mutants: M226A in-house 2009-05-05 2009-06-30 Oberholzer, A.E.,Bumann, M.,Hege, T.,Russo, S.,Baumann, U. Metzincin's canonical methionine is responsible for the structural integrity of the zinc-binding site Biol.Chem. 2009 390 875 881 3HDA 19558324 PrtC methionine mutants: M226A_DESY 2009-05-07 2009-06-30 Oberholzer, A.E.,Bumann, M.,Hege, T.,Russo, S.,Baumann, U. Metzincin's canonical methionine is responsible for the structural integrity of the zinc-binding site Biol.Chem. 2009 390 875 881 3DR0 19678839 Structure of reduced cytochrome c6 from Synechococcus sp. PCC 7002 2008-07-10 2009-07-14 Bialek, W.,Krzywda, S.,Jaskolski, M.,Szczepaniak, A. Atomic-resolution structure of reduced cyanobacterial cytochrome c6 with an unusual sequence insertion Febs J. 2009 276 4426 4436 3HBU 19558324 PrtC methionine mutants: M226H DESY 2009-05-05 2009-07-21 Oberholzer, A.E.,Bumann, M.,Hege, T.,Russo, S.,Baumann, U. Metzincin's canonical methionine is responsible for the structural integrity of the zinc-binding site Biol.Chem. 2009 390 875 881 3H6U 19591837 Crystal structure of the iGluR2 ligand-binding core (S1S2J-N754S) in complex with glutamate and NS1493 at 1.85 A resolution 2009-04-24 2009-07-28 Hald, H.,Ahring, P.K.,Timmermann, D.B.,Liljefors, T.,Gajhede, M.,Kastrup, J.S. Distinct structural features of cyclothiazide are responsible for effects on peak current amplitude and desensitization kinetics at iGluR2. J.Mol.Biol. 2009 391 906 917 3HB2 19558324 PrtC methionine mutants: M226I 2009-05-04 2009-08-04 Oberholzer, A.E.,Bumann, M.,Hege, T.,Russo, S.,Baumann, U. Metzincin's canonical methionine is responsible for the structural integrity of the zinc-binding site Biol.Chem. 2009 390 875 881 2WFL 19496101 Crystal structure of polyneuridine aldehyde esterase 2009-04-08 2009-08-18 Yang, L.,Hill, M.,Wang, M.,Panjikar, S.,Stockigt, J. Structural Basis and Enzymatic Mechanism of the Biosynthesis of C9- from C10-Monoterpenoid Indole Alkaloids. Angew.Chem.Int.Ed.Engl. 2009 48 5211 0 3EBP 23279842 Glycogen Phosphorylase b/flavopiridol complex 2008-08-28 2009-09-01 Tsitsanou, K.E.,Hayes, J.M.,Keramioti, M.,Mamais, M.,Oikonomakos, N.G.,Kato, A.,Leonidas, D.D.,Zographos, S.E. Sourcing the affinity of flavonoids for the glycogen phosphorylase inhibitor site via crystallography, kinetics and QM/MM-PBSA binding studies: Comparison of chrysin and flavopiridol Food Chem.Toxicol. 2013 61 14 27 3H3F 19715328 Rabbit muscle L-lactate dehydrogenase in complex with NADH and oxamate 2009-04-16 2009-09-15 Swiderek, K.,Panczakiewicz, A.,Bujacz, A.,Bujacz, G.,Paneth, P. Modeling of isotope effects on binding oxamate to lactic dehydrogenase J.Phys.Chem.B 2009 113 12782 12789 3GFQ 19682074 Structure of YhdA, K109L variant 2009-02-27 2009-09-22 Binter, A.,Staunig, N.,Jelesarov, I.,Lohner, K.,Palfey, B.A.,Deller, S.,Gruber, K.,Macheroux, P. A single intersubunit salt bridge affects oligomerization and catalytic activity in a bacterial quinone reductase Febs J. 2009 276 5263 5274 3HCJ 19733575 Structure of MsrB from Xanthomonas campestris (oxidized form) 2009-05-06 2009-10-13 Ranaivoson, F.M.,Neiers, F.,Kauffmann, B.,Boschi-Muller, S.,Branlant, G.,Favier, F. Methionine Sulfoxide Reductase B Displays a High Level of Flexibility. J.Mol.Biol. 2009 0 0 0 3F6J 24833052 F17a-G lectin domain with bound GlcNAc(beta1-3)Gal 2008-11-06 2009-11-17 Lonardi, E.,Moonens, K.,Buts, L.,de Boer, A.R.,Olsson, J.D.M.,Weiss, M.S.,Fabre, E.,Guerardel, Y.,Deelder, A.M.,Oscarson, S.,Wuhrer, M.,Bouckaert, J. Structural Sampling of Glycan Interaction Profiles Reveals Mucosal Receptors for Fimbrial Adhesins of Enterotoxigenic Escherichia coli Biology 2013 2 894 917 2WKS 19911771 Structure of Helicobacter pylori Type II Dehydroquinase with a new carbasugar-thiophene inhibitor. 2009-06-17 2009-11-24 Prazeres, V.F.,Tizon, L.,Otero, J.M.,Guardado-Calvo, P.,Llamas-Saiz, A.L.,van Raaij, M.J.,Castedo, L.,Lamb, H.,Hawkins, A.R.,Gonzalez-Bello, C. Synthesis and biological evaluation of new nanomolar competitive inhibitors of Helicobacter pylori type II dehydroquinase. Structural details of the role of the aromatic moieties with essential residues. J. Med. Chem. 2010 53 191 200 3FBW 20823547 Structure of Rhodococcus rhodochrous haloalkane dehalogenase DhaA mutant C176Y 2008-11-20 2009-11-24 Stsiapanava, A.,Dohnalek, J.,Gavira, J.A.,Kuty, M.,Koudelakova, T.,Damborsky, J.,Kuta Smatanova, I. Atomic resolution studies of haloalkane dehalogenases DhaA04, DhaA14 and DhaA15 with engineered access tunnels. Acta Crystallogr.,Sect.D 2010 66 962 969 3HZB 19921810 Crystal structure of a betagamma-crystallin domain from Flavobacterium johnsoniae 2009-06-23 2009-12-01 Aravind, P.,Mishra, A.,Suman, S.K.,Jobby, M.K.,Sankaranarayanan, R.,Sharma, Y. The betagamma-crystallin superfamily contains a universal motif for binding calcium Biochemistry 2009 48 12180 12190 3JRZ 19959472 CcdBVfi-FormII-pH5.6 2009-09-09 2009-12-01 De Jonge, N.,Hohlweg, W.,Garcia-Pino, A.,Respondek, M.,Buts, L.,Haesaerts, S.,Lah, J.,Zangger, K.,Loris, R. Structural and thermodynamic characterization of vibrio fischeri CCDB J.Biol.Chem. 2010 285 5606 5613 3JSC 19959472 CcdBVfi-FormI-pH7.0 2009-09-10 2009-12-01 De Jonge, N.,Hohlweg, W.,Garcia-Pino, A.,Respondek, M.,Buts, L.,Haesaerts, S.,Lah, J.,Zangger, K.,Loris, R. Structural and thermodynamic characterization of vibrio fischeri CCDB J.Biol.Chem. 2010 285 5606 5613 2WTL 19946376 Crystal structure of BfrA from M. tuberculosis 2009-09-17 2009-12-15 Gupta, V.,Gupta, R.K.,Khare, G.,Salunke, D.M.,Tyagi, A.K. Crystal Structure of Bfra from Mycobacterium Tuberculosis:Incorporation of Selenomethionine Results in Cleavage and Demetallation of Haem Plos One 2009 4 0 0 3FJW Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii 2008-12-15 2009-12-15 Piontek, K.,Choinowski, T.,Perez-Boada, M.,Ruiz-Duenas, F.J.,Martinez, M.J.,Plattner, D.A.,Martinez, A.T. Structural and Site-directed Mutagenesis Study of Versatile Peroxidase Oxidizing both Mn(II) and Aromatic Substrates To be Published 0 0 0 0 2W4J X-ray structure of a DAP-Kinase 2-277 2008-11-27 2009-12-22 De Diego, I.,Kuper, J.,Lehmann, F.,Wilmanns, M. X-Ray Structure of a Dap-Kinase Calmodulin Complex To be Published 0 0 0 0 3FKG Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii 2008-12-16 2009-12-22 Piontek, K.,Choinowski, T.,Perez-Boada, M.,Ruiz-Duenas, F.J.,Martinez, M.J.,Plattner, D.A.,Martinez, A.T. Structural and Site-directed Mutagenesis Study of Versatile Peroxidase Oxidizing both Mn(II) and Aromatic Substrates To be Published 0 0 0 0 3FM4 Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii 2008-12-19 2009-12-22 Piontek, K.,Choinowski, T.,Perez-Boada, M.,Ruiz-Duenas, F.J.,Martinez, M.J.,Plattner, D.A.,Martinez, A.T. Structural and Site-directed Mutagenesis Study of Versatile Peroxidase Oxidizing both Mn(II) and Aromatic Substrates To be Published 0 0 0 0 2X16 20693693 Crystallographic binding studies with an engineered monomeric variant of triosephosphate isomerase 2009-12-21 2009-12-29 Salin, M.,Kapetaniou, E.G.,Vaismaa, M.,Lajunen, M.,Casteleijn, M.G.,Neubauer, P.,Salmon, L.,Wierenga, R. Crystallographic Binding Studies with an Engineered Monomeric Variant of Triosephosphate Isomerase Acta Crystallogr.,Sect.D 2010 66 934 0 3I3Z 20208155 Human insulin 2009-07-01 2010-01-05 Timofeev, V.I.,Chuprov-Netochin, R.N.,Samigina, V.R.,Bezuglov, V.V.,Miroshnikov, K.A.,Kuranova, I.P. X-ray investigation of gene-engineered human insulin crystallized from a solution containing polysialic acid. Acta Crystallogr.,Sect.F 2010 66 259 263 2X1R 20693693 Crystallographic binding studies with an engineered monomeric variant of triosephosphate isomerase 2010-01-04 2010-01-26 Salin, M.,Kapetaniou, E.G.,Vaismaa, M.,Lajunen, M.,Casteleijn, M.G.,Neubauer, P.,Salmon, L.,Wierenga, R. Crystallographic Binding Studies with an Engineered Monomeric Variant of Triosephosphate Isomerase Acta Crystallogr.,Sect.D 2010 66 934 0 3FWH 20823547 Structure of haloalkane dehalogenase mutant Dha15 (I135F/C176Y) from Rhodococcus rhodochrous 2009-01-18 2010-02-02 Stsiapanava, A.,Dohnalek, J.,Gavira, J.A.,Kuty, M.,Koudelakova, T.,Damborsky, J.,Kuta Smatanova, I. Atomic resolution studies of haloalkane dehalogenases DhaA04, DhaA14 and DhaA15 with engineered access tunnels. Acta Crystallogr.,Sect.D 2010 66 962 969 3HCM 20077460 Crystal structure of human S100B in complex with S45 2009-05-06 2010-02-02 Agamennone, M.,Cesari, L.,Lalli, D.,Turlizzi, E.,Del Conte, R.,Turano, P.,Mangani, S.,Padova, A. Fragmenting the S100B-p53 Interaction: Combined Virtual/Biophysical Screening Approaches to Identify Ligands Chemmedchem 2010 5 428 435 3LFN 20167481 Crystal structure of CDK2 with SAR57, an aminoindazole type inhibitor 2010-01-18 2010-03-02 Lesuisse, D.,Dutruc-Rosset, G.,Tiraboschi, G.,Dreyer, M.K.,Maignan, S.,Chevalier, A.,Halley, F.,Bertrand, P.,Burgevin, M.C.,Quarteronet, D.,Rooney, T. Rational design of potent GSK3beta inhibitors with selectivity for Cdk1 and Cdk2. Bioorg.Med.Chem.Lett. 2010 20 1985 1989 3G1K 20434457 Mth0212 (WT) crystallized in a monoclinic space group 2009-01-30 2010-03-09 Lakomek, K.,Dickmanns, A.,Ciirdaeva, E.,Schomacher, L.,Ficner, R. Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA J.Mol.Biol. 2010 399 604 617 3G2C 20434457 Mth0212 in complex with a short ssDNA (CGTA) 2009-01-31 2010-03-09 Lakomek, K.,Dickmanns, A.,Ciirdaeva, E.,Schomacher, L.,Ficner, R. Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA J.Mol.Biol. 2010 399 604 617 3G38 20434457 The catalytically inactive mutant Mth0212 (D151N) in complex with an 8 bp dsDNA 2009-02-02 2010-03-09 Lakomek, K.,Dickmanns, A.,Ciirdaeva, E.,Schomacher, L.,Ficner, R. Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA J.Mol.Biol. 2010 399 604 617 2WE5 20188742 Carbamate kinase from Enterococcus faecalis bound to MgADP 2009-03-27 2010-03-16 Ramon-Maiques, S.,Marina, A.,Guinot, A.,Gil-Ortiz, F.,Uriarte, M.,Fita, I.,Rubio, V. Substrate Binding and Catalysis in Carbamate Kinase Ascertained by Crystallographic and Site- Directed Mutagenesis Studies. Movements and Significance of a Unique Globular Subdomain of This Key Enzyme for Fermentative ATP Production in Bacteria. J.Mol.Biol. 2010 397 1261 0 3L1O 20184958 Crystal structure of monoclonal antibody MN423 Fab fragment with free combining site, crystallized in the presence of zinc 2009-12-14 2010-03-16 Skrabana, R.,Dvorsky, R.,Sevcik, J.,Novak, M. Monoclonal antibody MN423 as a stable mold facilitates structure determination of disordered tau protein J.Struct.Biol. 2010 171 74 81 3GR8 Structure of OYE from Geobacillus kaustophilus, orthorhombic crystal form 2009-03-25 2010-03-31 Schittmayer, M.,Zach, S.,Winkler, M.,Winkler, A.,Macheroux, P.,Uhl, M.K.,Gruber, K.,Kambourakis, S.,Rozzell, D.,Glieder, A. Old Yellow Enzyme-Catalyzed Dehydrogenation of Saturated Ketones ADV.SYNTH.CATAL. 2011 353 268 274 3KSK Crystal Structure of single chain PvuII 2009-11-23 2010-04-14 Meramveliotaki, C.,Hountas, A.,Eliopoulos, E.,Kokkinidis, M. Crystal Structure of single chain PvuII To be Published 0 0 0 0 3G9X 20823547 Structure of haloalkane dehalogenase DhaA14 mutant I135F from Rhodococcus rhodochrous 2009-02-15 2010-04-28 Stsiapanava, A.,Dohnalek, J.,Gavira, J.A.,Kuty, M.,Koudelakova, T.,Damborsky, J.,Kuta Smatanova, I. Atomic resolution studies of haloalkane dehalogenases DhaA04, DhaA14 and DhaA15 with engineered access tunnels. Acta Crystallogr.,Sect.D 2010 66 962 969 3G9X 20823547 Structure of haloalkane dehalogenase DhaA14 mutant I135F from Rhodococcus rhodochrous 2009-02-15 2010-04-28 Stsiapanava, A.,Dohnalek, J.,Gavira, J.A.,Kuty, M.,Koudelakova, T.,Damborsky, J.,Kuta Smatanova, I. Atomic resolution studies of haloalkane dehalogenases DhaA04, DhaA14 and DhaA15 with engineered access tunnels. Acta Crystallogr.,Sect.D 2010 66 962 969 3HML 20602352 Crystal Structure of PqqC Active Site Mutant H154S in Complex with PQQ 2009-05-29 2010-05-12 Puehringer, S.,RoseFigura, J.,Metlitzky, M.,Toyama, H.,Klinman, J.P.,Schwarzenbacher, R. Structural studies of mutant forms of the PQQ-forming enzyme PqqC in the presence of product and substrate Proteins 2010 78 2554 2562 3HLP Carboxypeptidase A liganded to an organic small-molecule: conformational changes 2009-05-28 2010-06-02 Fernandez, D.,Montenegro, M.,Garcia, M.,Aviles, F.X.,Vendrell, J. Carboxypeptidase A liganded to an organic small-molecule: conformational To be Published 0 0 0 0 3HUV Carboxypeptidase A liganded to an organic small-molecule: conformational changes 2009-06-15 2010-06-02 Fernandez, D. Carboxypeptidase A liganded to an organic small-molecule: conformational changes To be Published 0 0 0 0 2X6M 20620148 Structure of a single domain camelid antibody fragment in complex with a C-terminal peptide of alpha-synuclein 2010-02-18 2010-06-23 De Genst, E.J.,Guilliams, T.,Wellens, J.,O'Day, E.M.,Waudby, C.A.,Meehan, S.,Dumoulin, M.,Hsu, S.-T.D.,Cremades, N.,Verschueren, K.H.G.,Pardon, E.,Wyns, L.,Steyaert, J.,Christodoulou, J.,Dobson, C.M. Structure and Properties of a Complex of Alpha-Synuclein and a Single-Domain Camelid Antibody. J.Mol.Biol. 2010 402 326 0 3N2T 20887732 Structure of the glycerol dehydrogenase AKR11B4 from Gluconobacter oxydans 2010-05-19 2010-07-21 Richter, N.,Breicha, K.,Hummel, W.,Niefind, K. The Three-Dimensional Structure of AKR11B4, a Glycerol Dehydrogenase from Gluconobacter oxydans, Reveals a Tryptophan Residue as an Accelerator of Reaction Turnover. J.Mol.Biol. 2010 404 353 362 2WT0 20686025 Galectin domain of porcine adenovirus type 4 NADC-1 isolate fibre complexed with N-acetyl-lactosamine 2009-09-10 2010-08-11 Guardado-Calvo, P.,Munoz, E.M.,Llamas-Saiz, A.L.,Fox, G.C.,Kahn, R.,Curiel, D.T.,Glasgow, J.N.,van Raaij, M.J. Crystallographic structure of porcine adenovirus type 4 fiber head and galectin domains. J. Virol. 2010 84 10558 10568 2WT2 20686025 Galectin domain of porcine adenovirus type 4 NADC-1 isolate fibre complexed with tri(N-acetyl-lactosamine) 2009-09-10 2010-08-11 Guardado-Calvo, P.,Munoz, E.M.,Llamas-Saiz, A.L.,Fox, G.C.,Kahn, R.,Curiel, D.T.,Glasgow, J.N.,van Raaij, M.J. Crystallographic structure of porcine adenovirus type 4 fiber head and galectin domains. J. Virol. 2010 84 10558 10568 3NHA 20823549 Nucleotide Binding Domain of Human ABCB6 (ADP Mg bound structure) 2010-06-14 2010-08-25 Haffke, M.,Menzel, A.,Carius, Y.,Jahn, D.,Heinz, D.W. Structures of the nucleotide-binding domain of the human ABCB6 transporter and its complexes with nucleotides. Acta Crystallogr.,Sect.D 2010 66 979 987 2WK4 Dimeric structure of D347G D348G mutant of the sapporovirus RNA dependent RNA polymerase 2009-06-05 2010-09-01 Fullerton, S.W.B.,Robel, I.,Schuldt, L.,Gebhardt, J.,Tucker, P.A.,Rohayem, J. Dimeric Structure of D347G D348G Mutant of the Sapporovirus Sapporovirus RNA Dependent RNA Polymerase To be Published 0 0 0 0 3JTM Structure of recombinant formate dehydrogenase from Arabidopsis thaliana 2009-09-13 2010-09-15 Timofeev, V.I.,Shabalin, I.G.,Serov, A.E.,Polyakov, K.M.,Popov, V.O.,Tishkov, V.I.,Kuranova, I.P.,Samigina, V.R. Structure of recombinant formate dehydrogenase from Arabidopsis thaliana to be published 0 0 0 0 2WT7 24530283 Crystal structure of the bZIP heterodimeric complex MafB:cFos bound to DNA 2009-09-11 2010-09-29 Pogenberg, V.,Consani Textor, L.,Vanhille, L.,Holton, S.J.,Sieweke, M.H.,Wilmanns, M. Design of a bZIP Transcription Factor with Homo/Heterodimer-Induced DNA-Binding Preference. Structure 2014 22 466 0 3MMO 20944237 Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with cyanide 2010-04-20 2010-09-29 Trofimov, A.A.,Polyakov, K.M.,Boyko, K.M.,Tikhonova, T.V.,Safonova, T.N.,Tikhonov, A.V.,Popov, A.N.,Popov, V.O. Structures of complexes of octahaem cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens with sulfite and cyanide. Acta Crystallogr.,Sect.D 2010 66 1043 1047 3O5B 20943665 Crystal structure of dimeric KlHxk1 in crystal form VII with glucose bound (open state) 2010-07-28 2010-10-13 Kuettner, E.B.,Kettner, K.,Keim, A.,Svergun, D.I.,Volke, D.,Singer, D.,Hoffmann, R.,Muller, E.C.,Otto, A.,Kriegel, T.M.,Strater, N. Crystal Structure of Hexokinase KlHxk1 of Kluyveromyces lactis: A MOLECULAR BASIS FOR UNDERSTANDING THE CONTROL OF YEAST HEXOKINASE FUNCTIONS VIA COVALENT MODIFICATION AND OLIGOMERIZATION. J.Biol.Chem. 2010 285 41019 41033 3M40 20889345 Crystal structure of human carbonic anhydrase isozyme II with 4-[N-(6-chloro-5-nitropyrimidin-4-yl)amino]benzenesulfonamide 2010-03-10 2010-10-20 Sudzius, J.,Baranauskiene, L.,Golovenko, D.,Matuliene, J.,Michailoviene, V.,Torresan, J.,Jachno, J.,Sukackaite, R.,Manakova, E.,Grazulis, S.,Tumkevicius, S.,Matulis, D. 4-[N-(Substituted 4-pyrimidinyl)amino]benzenesulfonamides as inhibitors of carbonic anhydrase isozymes I, II, VII, and XIII Bioorg.Med.Chem. 2010 18 7413 7421 3KGQ 21804935 Carboxypeptidase A liganded to an organic small-molecule: conformational changes 2009-10-29 2010-10-27 Fernandez, D.,Boix, E.,Pallares, I.,Aviles, F.X.,Vendrell, J. Structural and Functional Analysis of the Complex between Citrate and the Zinc Peptidase Carboxypeptidase A Enzyme Res 2011 2011 128676 128676 2XVQ 20940056 Human serum albumin complexed with dansyl-L-sarcosine 2010-10-27 2010-11-10 Ryan, A.J.,Ghuman, J.,Zunszain, P.A.,Chung, C.W.,Curry, S. Structural Basis of Binding of Fluorescent, Site-Specific Dansylated Amino Acids to Human Serum Albumin. J.Struct.Biol. 2011 174 84 0 2XVW 20940056 Human serum albumin complexed with dansyl-L-arginine and myristic acid 2010-10-28 2010-11-10 Ryan, A.J.,Ghuman, J.,Zunszain, P.A.,Chung, C.W.,Curry, S. Structural Basis of Binding of Fluorescent, Site-Specific Dansylated Amino Acids to Human Serum Albumin. J.Struct.Biol. 2011 174 84 0 3O4H 21084296 Structure and Catalysis of Acylaminoacyl Peptidase 2010-07-27 2010-11-17 Harmat, V.,Domokos, K.,Menyhard, D.K.,Pallo, A.,Szeltner, Z.,Szamosi, I.,Beke-Somfai, T.,Naray-Szabo, G.,Polgar, L. Structure and Catalysis of Acylaminoacyl Peptidase: CLOSED AND OPEN SUBUNITS OF A DIMER OLIGOPEPTIDASE. J.Biol.Chem. 2011 286 1987 1998 3O4J 21084296 Structure and Catalysis of Acylaminoacyl Peptidase 2010-07-27 2010-11-17 Harmat, V.,Domokos, K.,Menyhard, D.K.,Pallo, A.,Szeltner, Z.,Szamosi, I.,Beke-Somfai, T.,Naray-Szabo, G.,Polgar, L. Structure and Catalysis of Acylaminoacyl Peptidase: CLOSED AND OPEN SUBUNITS OF A DIMER OLIGOPEPTIDASE. J.Biol.Chem. 2011 286 1987 1998 2WYW 23027736 High resolution structure of Thermus thermophilus enoyl-acyl carrier protein reductase NAD and triclosan-form 2009-11-20 2010-11-24 Otero, J.M.,Noel, A.J.,Guardado-Calvo, P.,Llamas-Saiz, A.L.,Wende, W.,Schierling, B.,Pingoud, A.,van Raaij, M.J. High-resolution structures of Thermus thermophilus enoyl-acyl carrier protein reductase in the apo form, in complex with NAD+ and in complex with NAD+ and triclosan. Acta Crystallogr. Sect. F Stru 2012 68 1139 1148 3NX0 21074623 Hinge-loop mutation can be used to control 3D domain swapping and amyloidogenesis of human cystatin C 2010-07-12 2010-12-01 Orlikowska, M.,Jankowska, E.,Kolodziejczyk, R.,Jaskolski, M.,Szymanska, A. Hinge-loop mutation can be used to control 3D domain swapping and amyloidogenesis of human cystatin C. J.Struct.Biol. 2011 173 406 413 3PD9 21067182 X-ray structure of the ligand-binding core of GluA2 in complex with (R)-5-HPCA at 2.1 A resolution 2010-10-22 2010-12-29 Frydenvang, K.,Pickering, D.S.,Greenwood, J.R.,Krogsgaard-Larsen, N.,Brehm, L.,Nielsen, B.,Vogensen, S.B.,Hald, H.,Kastrup, J.S.,Krogsgaard-Larsen, P.,Clausen, R.P. Biostructural and pharmacological studies of bicyclic analogues of the 3-isoxazolol glutamate receptor agonist ibotenic acid. J. Med. Chem. 2010 53 8354 8361 3L8A Crystal structure of MetC from Streptococcus mutans 2009-12-30 2011-01-12 Wang, X.J.,Fu, T.M.,Mi, W.,Su, X.D. Crystal structure of MetC from Streptococcus mutans To be Published 0 0 0 0 3L77 X-ray structure alcohol dehydrogenase from archaeon Thermococcus sibiricus complexed with 5-hydroxy-NADP 2009-12-28 2011-01-19 Lyashenko, A.V.,Lashkov, A.A.,Gabdoulkhakov, A.G.,Mikhailov, A.M. X-ray structure alcohol dehydrogenase from archaeon Thermococcus sibiricus complexed with 5-hydroxy-NADP To be Published 0 0 0 0 3PXL Type-2 Cu-depleted fungus laccase from Trametes hirsuta 2010-12-10 2011-02-16 Polyakov, K.M.,Fedorova, T.V.,Kurzeev, S.A.,Popov, A.N.,Lamzin, V.S.,Koroleva, O.V. Crystal structure of T2-depleted fungal laccase from Trametes hirsuta at low and high dose of ionization radiation. To be Published 0 0 0 0 2Y5P 21345802 B-repeat of Listeria monocytogenes InlB (internalin B) 2011-01-17 2011-02-23 Ebbes, M.,Bleymuller, W.M.,Cernescu, M.,Nolker, R.,Brutschy, B.,Niemann, H.H. Fold and Function of the Inlb B-Repeat. J.Biol.Chem. 2011 286 15496 0 2Y89 21321225 CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS PHOSPHORIBOSYL ISOMERASE A (VARIANT D11N) 2011-02-03 2011-03-02 Due, A.V.,Kuper, J.,Geerlof, A.,Kries, J.P.,Wilmanns, M. Bisubstrate Specificity in Histidine/Tryptophan Biosynthesis Isomerase from Mycobacterium Tuberculosis by Active Site Metamorphosis. Proc.Natl.Acad.Sci.USA 2011 108 3554 0 2YCE 15766250 Structure of an Archaeal fructose-1,6-bisphosphate aldolase with the catalytic Lys covalently bound to the carbinolamine intermediate of the substrate. 2011-03-14 2011-04-27 Lorentzen, E.,Siebers, B.,Hensel, R.,Pohl, E. Mechanism of the Schiff Base Forming Fructose-1,6-Bisphosphate Aldolase: Structural Analysis of Reaction Intermediates. Biochemistry 2005 44 4222 0 3MJX 19122661 Crystal structure of myosin-2 motor domain in complex with ADP-Metavanadate and blebbistatin 2010-04-13 2011-04-27 Fedorov, R.,Bohl, M.,Tsiavaliaris, G.,Hartmann, F.K.,Taft, M.H.,Baruch, P.,Brenner, B.,Martin, R.,Knolker, H.J.,Gutzeit, H.O.,Manstein, D.J. The mechanism of pentabromopseudilin inhibition of myosin motor activity. Nat.Struct.Mol.Biol. 2009 16 80 88 3MNQ Crystal structure of myosin-2 motor domain in complex with ADP-metavanadate and resveratrol 2010-04-22 2011-04-27 Schneider, J.,Taft, M.,Backhaus, A.,Baruch, P.,Fedorov, R.,Manstein, D.J. Structural basis of resveratrol regulation of myosin activity. To be Published 0 0 0 0 3RK6 21539810 Crystal structure of the middle domain of human Paip1 2011-04-17 2011-05-18 Lei, J.,Mesters, J.R.,Brunn, A.,Hilgenfeld, R. Crystal structure of the middle domain of human poly(A)-binding protein-interacting protein 1. Biochem.Biophys.Res.Commun. 2011 408 680 685 3MVG Native structure of IRIP, a type I ribosome inactivating protein from Iris hollandica var. at 1.25 A 2010-05-04 2011-06-01 Meyer, A.,Weber, W.,Singh, T.P.,Betzel, C. Native structure of IRIP, a type I ribosome inactivating protein from Iris hollandica var. at 1.25 A to be published 0 0 0 0 3R1D 21596781 Crystal structure of GC(8BrG)GCGGCGGC duplex 2011-03-10 2011-06-01 Kiliszek, A.,Kierzek, R.,Krzyzosiak, W.J.,Rypniewski, W. Crystal structures of CGG RNA repeats with implications for fragile X-associated tremor ataxia syndrome. Nucleic Acids Res. 2011 39 7308 7315 3R1E 21596781 Crystal structure of GC(8BrG)GCGGC duplex 2011-03-10 2011-06-01 Kiliszek, A.,Kierzek, R.,Krzyzosiak, W.J.,Rypniewski, W. Crystal structures of CGG RNA repeats with implications for fragile X-associated tremor ataxia syndrome. Nucleic Acids Res. 2011 39 7308 7315 3O76 21134126 1.8 Angstroms molecular structure of mouse liver glutathione S-transferase mutant C47A complexed with S-(P-nitrobenzyl)glutathione 2010-07-30 2011-06-15 McManus, G.,Costa, M.,Canals, A.,Coll, M.,Mantle, T.J. Site-directed mutagenesis of mouse glutathione transferase P1-1 unlocks masked cooperativity, introduces a novel mechanism for 'ping pong' kinetic behaviour, and provides further structural evidence for participation of a water molecule in proton abstraction from glutathione. Febs J. 2011 278 273 281 3O5C 21742904 Cytochrome c Peroxidase BccP of Shewanella oneidensis 2010-07-28 2011-08-03 Schutz, B.,Seidel, J.,Sturm, G.,Einsle, O.,Gescher, J. Investigation of the Electron Transport Chain to and the Catalytic Activity of the Diheme Cytochrome c Peroxidase CcpA of Shewanella oneidensis. Appl.Environ.Microbiol. 2011 77 6172 6180 3S0J 21821421 The crystal structure of glycogen phosphorylase b in complex with 2,5-dihydroxy-4-(beta-D-glucopyranosyl)-chlorobenzene 2011-05-13 2011-08-31 Alexacou, K.M.,Zhang, Y.Z.,Praly, J.P.,Zographos, S.E.,Chrysina, E.D.,Oikonomakos, N.G.,Leonidas, D.D. Halogen-substituted (C-beta-D-glucopyranosyl)-hydroquinone regioisomers: synthesis, enzymatic evaluation and their binding to glycogen phosphorylase. Bioorg.Med.Chem. 2011 19 5125 5136 2XZ0 21930947 The Structure of the 2:1 (Partially Occupied) Complex Between Stearoyl Acyl Carrier Protein Desaturase from Ricinus Communis (Castor Bean) and Acyl Carrier Protein. 2010-11-22 2011-09-07 Guy, J.E.,Whittle, E.,Moche, M.,Lengqvist, J.,Lindqvist, Y.,Shanklin, J. Remote Control of Regioselectivity in Acyl-Acyl Carrier Protein-Desaturases. Proc.Natl.Acad.Sci.USA 2011 108 16594 0 3TQ3 Crystal structure of M-PMV dUTPase with a mixed population of substrate (dUPNPP) and post-inversion product (dUMP) in the active sites 2011-09-09 2011-10-12 Barabas, O.,Nemeth, V.,Bodor, A.,Perczel, A.,Rosta, E.,Kele, Z.,Zagyva, I.,Szabadka, Z.,Grolmusz, V.I.,Wilmanns, M.,Vertessy, B.G. Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize In-line Attack and Inversion to be published 0 0 0 0 3TQ4 Crystal structure of M-PMV dUTPase with a mixed population of substrate (dUPNPP) and post-inversion product (dUMP) in the active sites 2011-09-09 2011-10-12 Barabas, O.,Nemeth, V.,Bodor, A.,Perczel, A.,Rosta, E.,Kele, Z.,Zagyva, I.,Szabadka, Z.,Grolmusz, V.I.,Wilmanns, M.,Vertessy, B.G. Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize In-line Attack and Inversion to be published 0 0 0 0 3TQ5 Crystal structure of M-PMV dUTPASE post-inversion product (dUMP) COMPLEX 2011-09-09 2011-10-12 Barabas, O.,Nemeth, V.,Bodor, A.,Perczel, A.,Rosta, E.,Kele, Z.,Zagyva, I.,Szabadka, Z.,Grolmusz, V.I.,Wilmanns, M.,Vertessy, B.G. Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize In-line Attack and Inversion to be published 0 0 0 0 3TRL Crystal structure of M-PMV dUTPASE post-inversion product (dUMP) complex 2011-09-09 2011-10-12 Barabas, O.,Nemeth, V.,Bodor, A.,Perczel, A.,Rosta, E.,Kele, Z.,Zagyva, I.,Szabadka, Z.,Grolmusz, V.I.,Wilmanns, M.,Vertessy, B.G. Structural Snapshots of Enzyme-Catalysed Phosphate Ester Hydrolysis Directly Visualize In-line Attack and Inversion To be Published 0 0 0 0 3OWM Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in a complex with hydroxylamine 2010-09-20 2011-10-26 Trofimov, A.A.,Polyakov, K.M.,Tikhonova, T.V.,Popov, V.O. Binding of sulfite by the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase To be Published 0 0 0 0 2XYB CRYSTAL STRUCTURE OF A FULLY FUNCTIONAL LACCASE FROM THE LIGNINOLYTIC FUNGUS PYCNOPORUS CINNABARINUS 2010-11-17 2011-11-30 Piontek, K.,Choinowski, T.,Antorini, M.,Herpoel-Gimbert, I.,Asther, M.,Plattner, D.A. Substrate Binding and Copper Geometry in Laccases To be Published 0 0 0 0 3ZZY 22153504 Crystal structure of a Raver1 PRI3 peptide in complex with polypyrimidine tract binding protein RRM2 2011-09-06 2011-12-28 Joshi, A.,Coelho, M.B.,Kotik-Kogan, O.,Simpson, P.J.,Matthews, S.J.,Smith, C.W.,Curry, S. Crystallographic Analysis of Polypyrimidine Tract-Binding Protein-Raver1 Interactions Involved in Regulation of Alternative Splicing. Structure 2011 19 1816 0 4ABT Crystal structure of Type IIF restriction endonuclease NgoMIV with cognate uncleaved DNA 2011-12-11 2011-12-28 Manakova, E.N.,Grazulis, S.,Zaremba, M.,Tamulaitiene, G.,Golovenko, D.,Siksnys, V. Structure of Type Iif Restriction Endonuclease Ngomiv with Cognate Uncleaved DNA To be Published 0 0 0 0 3V9C Type-2 Cu-depleted fungus laccase from Trametes hirsuta at low dose of ionization radiation 2011-12-26 2012-02-22 Polyakov, K.M.,Fedorova, T.V.,Kurzeev, S.A.,Popov, A.N.,Lamzin, V.S.,Koroleva, O.V. Crystal structure of T2-depleted fungal laccase from Trametes hirsuta 072 at low and high dose of ionization radiation To be Published 0 0 0 0 3SAP 22440859 Crystal structure of human carbonic anhydrase isozyme II with 4-{[(5-butyl-2-pyrimidinyl)sulfanyl]acetyl}benzenesulfonamide 2011-06-03 2012-04-11 Capkauskaite, E.,Zubriene, A.,Baranauskiene, L.,Tamulaitiene, G.,Manakova, E.,Kairys, V.,Grazulis, S.,Tumkevicius, S.,Matulis, D. Design of [(2-pyrimidinylthio)acetyl]benzenesulfonamides as inhibitors of human carbonic anhydrases. Eur.J.Med.Chem. 2012 51 259 270 3SBH 22440859 Crystal structure of human carbonic anhydrase isozyme II with 4-{[(4,6-dimethyl-2-pyrimidinyl)sulfanyl]acetyl}benzenesulfonamide 2011-06-05 2012-04-11 Capkauskaite, E.,Zubriene, A.,Baranauskiene, L.,Tamulaitiene, G.,Manakova, E.,Kairys, V.,Grazulis, S.,Tumkevicius, S.,Matulis, D. Design of [(2-pyrimidinylthio)acetyl]benzenesulfonamides as inhibitors of human carbonic anhydrases. Eur.J.Med.Chem. 2012 51 259 270 3RJ8 Crystal structure of carbohydrate oxidase from Microdochium nivale 2011-04-15 2012-04-18 Duskova, J.,Skalova, T.,Kolenko, P.,Stepankova, A.,Koval, T.,Hasek, J.,Ostergaard, L.H.,Fuglsang, C.C.,Dohnalek, J. Crystal structure and kinetic studies of carbohydrate oxidase from Microdochium nivale To be Published 0 0 0 0 3V20 22495930 Crystal structure of Type IIF restriction endonuclease Bse634I with cognate DNA 2011-12-11 2012-04-25 Manakova, E.,Grazulis, S.,Zaremba, M.,Tamulaitiene, G.,Golovenko, D.,Siksnys, V. Structural mechanisms of the degenerate sequence recognition by Bse634I restriction endonuclease. Nucleic Acids Res. 2012 40 6741 6751 3V21 22495930 Crystal structure of Type IIF restriction endonuclease Bse634I with cognate DNA 2011-12-11 2012-04-25 Manakova, E.,Grazulis, S.,Zaremba, M.,Tamulaitiene, G.,Golovenko, D.,Siksnys, V. Structural mechanisms of the degenerate sequence recognition by Bse634I restriction endonuclease. Nucleic Acids Res. 2012 40 6741 6751 3SSC 22570415 DNA binding domain of restriction endonuclease bound to DNA 2011-07-08 2012-05-23 Sukackaite, R.,Grazulis, S.,Tamulaitis, G.,Siksnys, V. The recognition domain of the methyl-specific endonuclease McrBC flips out 5-methylcytosine. Nucleic Acids Res. 2012 40 7552 7562 3SSD 22570415 DNA binding domain of restriction endonuclease bound to DNA 2011-07-08 2012-05-23 Sukackaite, R.,Grazulis, S.,Tamulaitis, G.,Siksnys, V. The recognition domain of the methyl-specific endonuclease McrBC flips out 5-methylcytosine. Nucleic Acids Res. 2012 40 7552 7562 3UR8 22683794 Lower-density crystal structure of potato endo-1,3-beta-glucanase 2011-11-21 2012-05-30 Wojtkowiak, A.,Witek, K.,Hennig, J.,Jaskolski, M. Two high-resolution structures of potato endo-1,3-beta-glucanase reveal subdomain flexibility with implications for substrate binding Acta Crystallogr.,Sect.D 2012 68 713 723 2YKF 22115998 Sensor region of a sensor histidine kinase 2011-05-26 2012-06-06 Preu, J.,Panjikar, S.,Morth, P.,Jaiswal, R.,Karunakar, P.,Tucker, P.A. The Sensor Region of the Ubiquitous Cytosolic Sensor Kinase, Pdtas, Contains Pas and Gaf Domain Sensing Modules. J.Struct.Biol. 2012 177 498 0 2YKH 22115998 Sensor region of a sensor histidine kinase 2011-05-27 2012-06-06 Preu, J.,Panjikar, S.,Morth, P.,Jaiswal, R.,Karunakar, P.,Tucker, P.A. The Sensor Region of the Ubiquitous Cytosolic Sensor Kinase, Pdtas, Contains Pas and Gaf Domain Sensing Modules. J.Struct.Biol. 2012 177 498 0 3ZS3 High resolution structure of Mal d 2, the thaumatin like food allergen from apple 2011-06-22 2012-07-11 Kopec, J.,Smole, U.,Pavkov, T.,Breiteneder, H.,Keller, W. High Resolution Structure of Mal D 2, the Thaumatin Like Food Allergen from Apple To be Published 0 0 0 0 4EC3 22757961 Structure of berberine bridge enzyme, H174A variant in complex with (S)-reticuline 2012-03-26 2012-07-18 Wallner, S.,Winkler, A.,Riedl, S.,Dully, C.,Horvath, S.,Gruber, K.,Macheroux, P. Catalytic and structural role of a conserved active site histidine in berberine bridge enzyme. Biochemistry 2012 51 6139 6147 4A3Y 22004291 Crystal structure of Raucaffricine glucosidase from ajmaline biosynthesis pathway 2011-10-06 2012-08-15 Xia, L.,Ruppert, M.,Wang, M.,Panjikar, S.,Lin, H.,Rajendran, C.,Barleben, L.,Stockigt, J. Structures of Alkaloid Biosynthetic Glucosidases Decode Substrate Specificity. Acs Chem.Biol. 2012 7 226 0 4GLD Crystal Structure of the complex of type II phospholipase A2 with a designed peptide inhibitor Phe - Leu - Ala - Tyr - Lys at 1.69 A resolution 2012-08-14 2012-08-29 Shukla, P.K.,Sinha, M.,Dey, S.,Kaur, P.,Sharma, S.,Singh, T.P. Crystal Structure of the complex of type II phospholipase A2 with a designed peptide inhibitor Phe - Leu - Ala - Tyr - Lys at 1.69 A resolution To be Published 0 0 0 0 3UY9 25003390 Bovine trypsin variant X(tripleGlu217Phe227) in complex with small molecule inhibitor 2011-12-06 2012-12-12 Tziridis, A.,Rauh, D.,Neumann, P.,Kolenko, P.,Menzel, A.,Brauer, U.,Ursel, C.,Steinmetzer, P.,Sturzebecher, J.,Schweinitz, A.,Steinmetzer, T.,Stubbs, M.T. Correlating structure and ligand affinity in drug discovery: a cautionary tale involving second shell residues. Biol.Chem. 2014 395 891 903 4GZI 23275163 Active-site mutant of potato endo-1,3-beta-glucanase in complex with laminaratriose 2012-09-06 2013-01-02 Wojtkowiak, A.,Witek, K.,Hennig, J.,Jaskolski, M. Structures of an active-site mutant of a plant 1,3-beta-glucanase in complex with oligosaccharide products of hydrolysis Acta Crystallogr.,Sect.D 2013 69 52 62 4GZJ 23275163 Active-site mutant of potato endo-1,3-beta-glucanase in complex with laminaratriose and laminaratetrose 2012-09-06 2013-01-02 Wojtkowiak, A.,Witek, K.,Hennig, J.,Jaskolski, M. Structures of an active-site mutant of a plant 1,3-beta-glucanase in complex with oligosaccharide products of hydrolysis Acta Crystallogr.,Sect.D 2013 69 52 62 4ATD 22704651 Crystal structure of native Raucaffricine glucosidase 2012-05-05 2013-01-16 Xia, L.,Rajendran, C.,Ruppert, M.,Panjikar, S.,Wang, M.,Stoeckigt, J. High Speed X-Ray Analysis of Plant Enzymes at Room Temperature Phytochemistry 2013 91 88 0 4DO2 25024213 Crystal Structure of the Rop protein mutant D30P/A31G at resolution 1.4 resolution. 2012-02-09 2013-02-13 Amprazi, M.,Kotsifaki, D.,Providaki, M.,Kapetaniou, E.G.,Fellas, G.,Kyriazidis, I.,Perez, J.,Kokkinidis, M. Structural plasticity of 4-alpha-helical bundles exemplified by the puzzle-like molecular assembly of the Rop protein. Proc.Natl.Acad.Sci.USA 2014 111 11049 11054 4EIC Crystal structure of reduced cytochrome c6 from Synechococcus sp. PCC 7002 at ultra-high resolution 2012-04-05 2013-04-10 Bialek, W.,Krzywda, S.,Zatwarnicki, P.,Jaskolski, M.,Szczepaniak, A. Cytochrome c6 and c6C from Synechococcus sp. PCC 7002 - structure and function. To be Published 0 0 0 0 4EID Crystal structure of cytochrome c6 Q57V mutant from Synechococcus sp. PCC 7002 2012-04-05 2013-04-10 Bialek, W.,Krzywda, S.,Zatwarnicki, P.,Jaskolski, M.,Szczepaniak, A. Cytochrome c6 and c6C from Synechococcus sp. PCC 7002 - structure and function. To be Published 0 0 0 0 4EIE Crystal structure of cytochrome c6C from Synechococcus sp. PCC 7002 2012-04-05 2013-04-10 Bialek, W.,Krzywda, S.,Zatwarnicki, P.,Jaskolski, M.,Szczepaniak, A. Cytochrome c6 and c6C from Synechococcus sp. PCC 7002 - structure and function. To be Published 0 0 0 0 4HT0 23394791 Crystal structure of human carbonic anhydrase isozyme II with the inhibitor. 2012-10-31 2013-04-10 Dudutiene, V.,Zubriene, A.,Smirnov, A.,Gylyte, J.,Timm, D.,Manakova, E.,Grazulis, S.,Matulis, D. 4-Substituted-2,3,5,6-tetrafluorobenzenesulfonamides as inhibitors of carbonic anhydrases I, II, VII, XII, and XIII. Bioorg.Med.Chem. 2013 21 2093 2106 4HU1 23394791 Crystal structure of human carbonic anhydrase isozyme XIII with the inhibitor. 2012-11-02 2013-04-10 Dudutiene, V.,Zubriene, A.,Smirnov, A.,Gylyte, J.,Timm, D.,Manakova, E.,Grazulis, S.,Matulis, D. 4-Substituted-2,3,5,6-tetrafluorobenzenesulfonamides as inhibitors of carbonic anhydrases I, II, VII, XII, and XIII. Bioorg.Med.Chem. 2013 21 2093 2106 4HXE 23632025 Pyrococcus horikoshii acylaminoacyl peptidase (uncomplexed) 2012-11-09 2013-05-08 Menyhard, D.K.,Kiss-Szeman, A.,Tichy-Racs, E.,Hornung, B.,Radi, K.,Szeltner, Z.,Domokos, K.,Szamosi, I.,Naray-Szabo, G.,Polgar, L.,Harmat, V. A Self-compartmentalizing Hexamer Serine Protease from Pyrococcus Horikoshii: SUBSTRATE SELECTION ACHIEVED THROUGH MULTIMERIZATION. J.Biol.Chem. 2013 288 17884 17894 4HIF 23695262 Ultrahigh-resolution crystal structure of Z-DNA in complex with Zn2+ ions 2012-10-11 2013-06-05 Drozdzal, P.,Gilski, M.,Kierzek, R.,Lomozik, L.,Jaskolski, M. Ultrahigh-resolution crystal structures of Z-DNA in complex with Mn(2+) and Zn(2+) ions. Acta Crystallogr.,Sect.D 2013 69 1180 1190 4AWU Crystal structure of the oxidized Shewanella Yellow Enzyme 1 (SYE1) M25L mutant in complex with para-chlorophenol 2012-06-05 2013-06-26 Elegheert, J.,Pauwels, E.,Wille, G.,Brige, A.,Savvides, S.N. Modulation of Isoalloxazine Ring Planarity Influences Fmn Electronic Properties in Old Yellow Enzymes To be Published 0 0 0 0 2YOZ 23831225 Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, crystallized with 2'-AMPS 2012-10-29 2013-07-10 Myllykoski, M.,Raasakka, A.,Lehtimaki, M.,Han, H.,Kursula, I.,Kursula, P. Crystallographic Analysis of the Reaction Cycle of 2',3'-Cyclic Nucleotide 3'-Phosphodiesterase, a Unique Member of the 2H Phosphoesterase Family J.Mol.Biol. 2013 425 4307 0 2YP0 23831225 Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, crystallized with 2'-AMPS 2012-10-29 2013-07-10 Myllykoski, M.,Raasakka, A.,Lehtimaki, M.,Han, H.,Kursula, I.,Kursula, P. Crystallographic Analysis of the Reaction Cycle of 2',3'-Cyclic Nucleotide 3'-Phosphodiesterase, a Unique Member of the 2H Phosphoesterase Family J.Mol.Biol. 2013 425 4307 0 2YPE 23831225 Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation H309S, crystallized with 2',3'- cyclic AMP 2012-10-30 2013-07-10 Myllykoski, M.,Raasakka, A.,Lehtimaki, M.,Han, H.,Kursula, I.,Kursula, P. Crystallographic Analysis of the Reaction Cycle of 2',3'-Cyclic Nucleotide 3'-Phosphodiesterase, a Unique Member of the 2H Phosphoesterase Family J.Mol.Biol. 2013 425 4307 4322 3ZOW 23908017 Crystal Structure of Wild Type Nitrosomonas europaea Cytochrome c552 2013-02-25 2013-08-14 Can, M.,Krucinska, J.,Zoppellaro, G.,Andersen, N.H.,Wedekind, J.E.,Hersleth, H.-P.,Andersson, K.K.,Bren, K.L. Structural Characterization of Nitrosomonas Europaea Cytochrome C-552 Variants with Marked Differences in Electronic Structure. Chembiochem 2013 14 1828 0 4HGC 24598736 Crystal structure of bovine trypsin complexed with sfti-1 analog containing a peptoid residue at position p1 2012-10-08 2013-10-09 Krzywda, S.,Jaskolski, M.,Rolka, K.,Stawikowski, M.J. Structure of a proteolytically resistant analogue of (NLys)(5)SFTI-1 in complex with trypsin: evidence for the direct participation of the Ser214 carbonyl group in serine protease-mediated proteolysis. Acta Crystallogr.,Sect.D 2014 70 668 675 4HGC 24598736 Crystal structure of bovine trypsin complexed with sfti-1 analog containing a peptoid residue at position p1 2012-10-08 2013-10-09 Krzywda, S.,Jaskolski, M.,Rolka, K.,Stawikowski, M.J. Structure of a proteolytically resistant analogue of (NLys)(5)SFTI-1 in complex with trypsin: evidence for the direct participation of the Ser214 carbonyl group in serine protease-mediated proteolysis. Acta Crystallogr.,Sect.D 2014 70 668 675 4KNJ 24103428 Crystal structure of human carbonic anhydrase isozyme II with 2-Chloro-4-[(pyrimidin-2-ylsulfanyl)acetyl]benzenesulfonamide 2013-05-10 2013-11-06 Capkauskaite, E.,Zubriene, A.,Smirnov, A.,Torresan, J.,Kisonaite, M.,Kazokaite, J.,Gylyte, J.,Michailoviene, V.,Jogaite, V.,Manakova, E.,Grazulis, S.,Tumkevicius, S.,Matulis, D. Benzenesulfonamides with pyrimidine moiety as inhibitors of human carbonic anhydrases I, II, VI, VII, XII, and XIII Bioorg.Med.Chem. 2013 21 6937 6947 4KP8 24103428 Crystal structure of catalytic domain of human carbonic anhydrase isozyme XII with 3-[(Pyrimidin-2-ylsulfanyl)acetyl]benzenesulfonamide 2013-05-13 2013-11-06 Capkauskaite, E.,Zubriene, A.,Smirnov, A.,Torresan, J.,Kisonaite, M.,Kazokaite, J.,Gylyte, J.,Michailoviene, V.,Jogaite, V.,Manakova, E.,Grazulis, S.,Tumkevicius, S.,Matulis, D. Benzenesulfonamides with pyrimidine moiety as inhibitors of human carbonic anhydrases I, II, VI, VII, XII, and XIII Bioorg.Med.Chem. 2013 21 6937 6947 4L78 24223728 Xenon Trapping and Statistical Coupling Analysis Uncover Regions Important for Structure and Function of Multidomain Protein StPurL 2013-06-13 2013-12-11 Tanwar, A.S.,Goyal, V.D.,Choudhary, D.,Panjikar, S.,Anand, R. Importance of hydrophobic cavities in allosteric regulation of formylglycinamide synthetase: insight from xenon trapping and statistical coupling analysis Plos One 2013 8 0 0 3ZJ6 25140865 Crystal of Raucaffricine Glucosidase in complex with inhibitor 2013-01-17 2014-01-29 Xia, L.,Lin, H.,Staniek, A.,Panjikar, S.,Ruppert, M.,Hilgers, P.,Williardt, J.,Rajendran, C.,Wang, M.,Warzecha, H.,Jager, V.,Stockigt, J. Ligand Structures of Synthetic Deoxa-Pyranosylamines with Raucaffricine and Strictosidine Glucosidases Provide Structural Insights Into Their Binding and Inhibitory Behaviours. J.Enzyme.Inhib.Med.Chem. 2015 30 472 0 4M2B Crystal structure of L281D mutant of udp-glucose pyrophosphorylase from leishmania major in complex with udp-glc 2013-08-05 2014-01-29 Fuehring, J.,Routier, F.H.,Lamerz, A.-C.,Baruch, P.,Gerardy-Schahn, R.,Fedorov, R. Catalytic Mechanism and Allosteric Regulation of Udp-Glucose Pyrophosphorylase from Leishmania Major ACS Catalysis 2013 36329 2976 2985 4BEB 26039067 MUTANT (K220E) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP 2013-03-07 2014-03-26 Csefalvay, E.,Lapkouski, M.,Guzanova, A.,Csefalvay, L.,Baikova, T.,Shevelev, I.,Bialevich, V.,Shamayeva, K.,Janscak, P.,Kuta Smatanova, I.,Panjikar, S.,Carey, J.,Weiserova, M.,Ettrich, R. Functional Coupling of Duplex Translocation to DNA Cleavage in a Type I Restriction Enzyme. Plos One 2015 10 28700 0 4KR7 24705700 Crystal structure of a 4-thiouridine synthetase - RNA complex with bound ATP 2013-05-16 2014-04-23 Neumann, P.,Lakomek, K.,Naumann, P.T.,Erwin, W.M.,Lauhon, C.T.,Ficner, R. Crystal structure of a 4-thiouridine synthetase-RNA complex reveals specificity of tRNA U8 modification. Nucleic Acids Res. 2014 42 6673 6685 4KR9 24705700 Crystal structure of a 4-thiouridine synthetase - RNA complex at 3.5 Angstrom resolution 2013-05-16 2014-04-23 Neumann, P.,Lakomek, K.,Naumann, P.T.,Erwin, W.M.,Lauhon, C.T.,Ficner, R. Crystal structure of a 4-thiouridine synthetase-RNA complex reveals specificity of tRNA U8 modification. Nucleic Acids Res. 2014 42 6673 6685 4L1H Bence-Jones immunoglobulin REI variable portion with seven point mutations 2013-06-03 2014-06-04 Uson, I. Bence-Jones immunoglobulin REI variable portion with seven point mutations To be Published 0 0 0 0 4RI6 25566286 Crystal structure of poplar glutathione transferase F1 2014-10-05 2015-01-21 Pegeot, H.,Koh, C.S.,Petre, B.,Mathiot, S.,Duplessis, S.,Hecker, A.,Didierjean, C.,Rouhier, N. The poplar Phi class glutathione transferase: expression, activity and structure of GSTF1. Front Plant Sci 2014 5 712 712 4CVC 26440996 Crystal structure of quinone-dependent alcohol dehydrogenase from Pseudogluconobacter saccharoketogenenes with zinc in the active site 2014-03-25 2015-03-25 Rozeboom, H.J.,Yu, S.,Mikkelsen, R.,Nikolaev, I.,Mulder, H.J.,Dijkstra, B.W. Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase from Pseudogluconobacter Saccharoketogenes. A Versatile Dehydrogenase Oxidizing Alcohols and Carbohydrates. Protein Sci. 2015 24 2044 0 4QJW 25758852 Crystal structure of catalytic domain of human carbonic anhydrase isozyme XII with inhibitor 2014-06-05 2015-04-15 Dudutiene, V.,Zubriene, A.,Smirnov, A.,Timm, D.D.,Smirnoviene, J.,Kazokaite, J.,Michailoviene, V.,Zaksauskas, A.,Manakova, E.,Grazulis, S.,Matulis, D. Functionalization of Fluorinated Benzenesulfonamides and Their Inhibitory Properties toward Carbonic Anhydrases Chemmedchem 2015 10 662 687 4QJX 25758852 Crystal structure of human carbonic anhydrase isozyme XIII with inhibitor 2014-06-05 2015-04-15 Dudutiene, V.,Zubriene, A.,Smirnov, A.,Timm, D.D.,Smirnoviene, J.,Kazokaite, J.,Michailoviene, V.,Zaksauskas, A.,Manakova, E.,Grazulis, S.,Matulis, D. Functionalization of Fluorinated Benzenesulfonamides and Their Inhibitory Properties toward Carbonic Anhydrases Chemmedchem 2015 10 662 687 5C9Y 26644353 Crystal structure of yellow lupine LlPR-10.1A protein partially saturated with trans-zeatin 2015-06-29 2015-12-09 Sliwiak, J.,Dolot, R.,Michalska, K.,Szpotkowski, K.,Bujacz, G.,Sikorski, M.,Jaskolski, M. Crystallographic and CD probing of ligand-induced conformational changes in a plant PR-10 protein. J.Struct.Biol. 2016 193 55 66 4UIE Crystal structure of the S-layer protein SbsC, domains 7, 8 and 9 2015-03-27 2016-04-13 Pavkov-Keller, T.,Dordic, A.,Eder, M.,Davies, K.,Mills, D.,Egelseer, E.M.,Sleytr, U.B.,Kuehlbrandt, W.,Vonck, J.,Keller, W. Crystal Structure of the S-Layer Protein Sbsc To be Published 0 0 0 0 5J8N Exonuclease III homologue Mm3148 from Methanosarcina mazei 2016-04-08 2016-04-27 Lakomek, K.,Dickmanns, A.,Ber, S.,Fritz, H.-J.,Ficner, R. Structure of the archael ExoIII homologue Mm3148 at 1.4 Angstrom To Be Published 0 0 0 0 5ET4 30287244 Structure of RNase A-K7H/R10H in complex with 3'-CMP 2015-11-17 2016-11-30 Prats-Ejarque, G.,Blanco, J.A.,Salazar, V.A.,Nogues, V.M.,Moussaoui, M.,Boix, E. Characterization of an RNase with two catalytic centers. Human RNase6 catalytic and phosphate-binding site arrangement favors the endonuclease cleavage of polymeric substrates. Biochim Biophys Acta Gen Subj 2019 1863 105 117 5MHB 28045381 Product-Complex of E.coli 5-Amino Laevulinic Acid Dehydratase 2016-11-23 2016-12-07 Mills-Davies, N.,Butler, D.,Norton, E.,Thompson, D.,Sarwar, M.,Guo, J.,Gill, R.,Azim, N.,Coker, A.,Wood, S.P.,Erskine, P.T.,Coates, L.,Cooper, J.B.,Rashid, N.,Akhtar, M.,Shoolingin-Jordan, P.M. Structural studies of substrate and product complexes of 5-aminolaevulinic acid dehydratase from humans, Escherichia coli and the hyperthermophile Pyrobaculum calidifontis. Acta Crystallogr D Struct Biol 2017 73 9 21 5K0R 28869767 Crystal structure of reduced Shewanella Yellow Enzyme 4 (SYE4) 2016-05-17 2017-06-07 Elegheert, J.,Brige, A.,Van Beeumen, J.,Savvides, S.N. Structural dissection of Shewanella oneidensis old yellow enzyme 4 bound to a Meisenheimer complex and (nitro)phenolic ligands. FEBS Lett. 2017 591 3391 3401 5K1M 28869767 Crystal structure of oxidized Shewanella Yellow Enzyme 4 (SYE4) in complex with p-methoxyphenol 2016-05-18 2017-06-07 Elegheert, J.,Brige, A.,Van Beeumen, J.,Savvides, S.N. Structural dissection of Shewanella oneidensis old yellow enzyme 4 bound to a Meisenheimer complex and (nitro)phenolic ligands. FEBS Lett. 2017 591 3391 3401 5K1Q 28869767 Crystal structure of oxidized Shewanella Yellow Enzyme 4 (SYE4) in complex with p-methylphenol 2016-05-18 2017-06-07 Elegheert, J.,Brige, A.,Van Beeumen, J.,Savvides, S.N. Structural dissection of Shewanella oneidensis old yellow enzyme 4 bound to a Meisenheimer complex and (nitro)phenolic ligands. FEBS Lett. 2017 591 3391 3401 5K1U 28869767 Crystal structure of reduced Shewanella Yellow Enzyme 4 (SYE4) in complex with the hydride Meisenheimer complex of trinitrophenol 2016-05-18 2017-06-07 Elegheert, J.,Brige, A.,Van Beeumen, J.,Savvides, S.N. Structural dissection of Shewanella oneidensis old yellow enzyme 4 bound to a Meisenheimer complex and (nitro)phenolic ligands. FEBS Lett. 2017 591 3391 3401 5K1W 28869767 Crystal structure of oxidized Shewanella Yellow Enzyme 4 (SYE4) in complex with trinitrophenol 2016-05-18 2017-06-07 Elegheert, J.,Brige, A.,Van Beeumen, J.,Savvides, S.N. Structural dissection of Shewanella oneidensis old yellow enzyme 4 bound to a Meisenheimer complex and (nitro)phenolic ligands. FEBS Lett. 2017 591 3391 3401 5Z5D 29698436 Crystal structure of a thermostable glycoside hydrolase family 43 {beta}-1,4-xylosidase from Geobacillus thermoleovorans IT-08 2018-01-17 2018-04-25 Rohman, A.,van Oosterwijk, N.,Puspaningsih, N.N.T.,Dijkstra, B.W. Structural basis of product inhibition by arabinose and xylose of the thermostable GH43 beta-1,4-xylosidase from Geobacillus thermoleovorans IT-08. PLoS ONE 2018 13 0 0 5Z5H 29698436 Crystal structure of a thermostable glycoside hydrolase family 43 {beta}-1,4-xylosidase from Geobacillus thermoleovorans IT-08 in complex with D-xylose 2018-01-18 2018-04-25 Rohman, A.,van Oosterwijk, N.,Puspaningsih, N.N.T.,Dijkstra, B.W. Structural basis of product inhibition by arabinose and xylose of the thermostable GH43 beta-1,4-xylosidase from Geobacillus thermoleovorans IT-08. PLoS ONE 2018 13 0 0 5MP3 Crystal structure of DC8E8 Fab in the complex with a 30-mer tau peptide at pH 6.5 2016-12-15 2018-05-02 Skrabana, R.,Novak, M. Crystal structure of DC8E8 Fab in the complex with a 30-mer tau peptide at pH 6.5 To be published 0 0 0 0 5MUQ Crystal structure of DC8E8 Fab at pH 7.0 containing a Zn atom 2017-01-13 2018-05-02 Skrabana, R.,Novak, M.,Cehlar, O.,Kontsekova, E. Crystal structure of DC8E8 Fab at pH 7.0 containing a Zn atom To be published 0 0 0 0 5VET 29113027 PHOSPHOLIPASE A2, RE-REFINEMENT OF THE PDB STRUCTURE 1JQ8 WITHOUT THE PUTATIVE COMPLEXED OLIGOPEPTIDE 2017-04-05 2018-06-20 Wlodawer, A.,Dauter, Z.,Porebski, P.J.,Minor, W.,Stanfield, R.,Jaskolski, M.,Pozharski, E.,Weichenberger, C.X.,Rupp, B. Detect, correct, retract: How to manage incorrect structural models. FEBS J. 2018 285 444 466 6B90 29877794 Multiconformer model of apo WT PTP1B with glycerol at 100 K (ALTERNATIVE REFINEMENT OF PDB 1SUG showing conformational heterogeneity) 2017-10-09 2018-06-20 Keedy, D.A.,Hill, Z.B.,Biel, J.T.,Kang, E.,Rettenmaier, T.J.,Brandao-Neto, J.,Pearce, N.M.,von Delft, F.,Wells, J.A.,Fraser, J.S. An expanded allosteric network in PTP1B by multitemperature crystallography, fragment screening, and covalent tethering. Elife 2018 7 0 0 6TSY 32880593 Cytochrome c6 from Thermosynechococcus elongatus in a monoclinic space group 2019-12-21 2020-01-15 Falke, S.,Feiler, C.,Chapman, H.,Sarrou, I. Crystal structures of native cytochrome c6from Thermosynechococcus elongatus in two different space groups and implications for its oligomerization. Acta Crystallogr.,Sect.F 2020 76 444 452 6TP9 32254062 c-type cytochrome NirC 2019-12-12 2020-04-22 Klunemann, T.,Henke, S.,Blankenfeldt, W. The crystal structure of the heme d1biosynthesis-associated small c-type cytochrome NirC reveals mixed oligomeric states in crystallo. Acta Crystallogr D Struct Biol 2020 76 375 384 6TV2 32255259 Heme d1 biosynthesis associated Protein NirF 2020-01-08 2020-04-22 Klunemann, T.,Nimtz, M.,Jansch, L.,Layer, G.,Blankenfeldt, W. Crystal structure of NirF: insights into its role in heme d 1 biosynthesis. Febs J. 2021 288 244 261 6TV9 32255259 Heme d1 biosynthesis associated Protein NirF in complex with dihydro-heme d1 2020-01-09 2020-04-22 Klunemann, T.,Nimtz, M.,Jansch, L.,Layer, G.,Blankenfeldt, W. Crystal structure of NirF: insights into its role in heme d 1 biosynthesis. Febs J. 2021 288 244 261 6LQL 32203655 Complex structure of CHAO with product from Erythrobacteraceae bacterium 2020-01-14 2020-06-03 Wu, X.,Huang, Z.,Wang, Z.,Li, Z.,Wang, J.,Lin, J.,Chen, F. Asymmetric Synthesis of a Key Dextromethorphan Intermediate and Its Analogues Enabled by a New Cyclohexylamine Oxidase: Enzyme Discovery, Reaction Development, and Mechanistic Insight. J.Org.Chem. 2020 85 5598 5614 6XY9 32612758 Crystal structure of haloalkane dehalogenase DbeA-M1 loop variant from Bradyrhizobium elkanii 2020-01-29 2020-07-22 Marek, M.,Chaloupkova, R.,Prudnikova, T.,Sato, Y.,Rezacova, P.,Nagata, Y.,Kuta Smatanova, I.,Damborsky, J. Structural and catalytic effects of surface loop-helix transplantation within haloalkane dehalogenase family. Comput Struct Biotechnol J 2020 18 1352 1362 6T4P 32971003 Human Carbonic anhydrase II bound by napthalene-1-sulfonamide 2019-10-14 2020-10-14 Dudutiene, V.,Zubriene, A.,Kairys, V.,Smirnov, A.,Smirnoviene, J.,Leitans, J.,Kazaks, A.,Tars, K.,Manakova, L.,Grazulis, S.,Matulis, D. Isoform-Selective Enzyme Inhibitors by Exploring Pocket Size According to the Lock-and-Key Principle. Biophys.J. 2020 119 1513 1524 6TPO 32510465 Conformation of cd1 nitrite reductase NirS without bound heme d1 2019-12-13 2020-11-18 Klunemann, T.,Blankenfeldt, W. Structure of heme d 1 -free cd 1 nitrite reductase NirS. Acta Crystallogr.,Sect.F 2020 76 250 256 6TSI 32510465 cd1 nitrite reductase NirS with bound dihydro-heme d1 2019-12-20 2020-11-18 Klunemann, T.,Blankenfeldt, W. Structure of heme d 1 -free cd 1 nitrite reductase NirS. Acta Crystallogr.,Sect.F 2020 76 250 256 6TUK 32744244 Crystal structure of Fdr9 2020-01-07 2020-11-18 Rodriguez Buitrago, J.A.,Klunemann, T.,Blankenfeldt, W.,Schallmey, A. Expression, purification and crystal structure determination of a ferredoxin reductase from the actinobacterium Thermobifida fusca. Acta Crystallogr.,Sect.F 2020 76 334 340 6Y7T 34427424 Engineered conjugation of lysine-specific molecular tweezers with ExoS derived peptidic inhibitor enhance affinity towards target protein 14-3-3 through ditopic binding 2020-03-02 2021-03-31 Guillory, X.,Hadrovic, I.,de Vink, P.J.,Sowislok, A.,Brunsveld, L.,Schrader, T.,Ottmann, C. Supramolecular Enhancement of a Natural 14-3-3 Protein Ligand. J.Am.Chem.Soc. 2021 143 13495 13500 6ZS1 33726638 Chaetomium thermophilum CuZn-superoxide dismutase 2020-07-15 2021-04-07 Mohsin, I.,Zhang, L.Q.,Li, D.C.,Papageorgiou, A.C. Crystal Structure of a Cu,Zn Superoxide Dismutase From the Thermophilic Fungus Chaetomium thermophilum. Protein Pept.Lett. 2021 28 1043 1053 8A4Q 36179320 crystal structures of diastereomer (R,S,S)-13b (13b-H) in complex with the SARS-CoV-2 Mpro. 2022-06-13 2022-10-12 Cooper, M.S.,Zhang, L.,Ibrahim, M.,Zhang, K.,Sun, X.,Roske, J.,Gohl, M.,Bronstrup, M.,Cowell, J.K.,Sauerhering, L.,Becker, S.,Vangeel, L.,Jochmans, D.,Neyts, J.,Rox, K.,Marsh, G.P.,Maple, H.J.,Hilgenfeld, R. Diastereomeric Resolution Yields Highly Potent Inhibitor of SARS-CoV-2 Main Protease. J.Med.Chem. 2022 65 13328 13342 7QW8 Adenine-specific DNA methyltransferase M.BseCI 2022-01-24 2023-01-25 Mitsikas, D.A.,Kouyianou, K.,Kotsifaki, D.,Providaki, M.,Bouriotis, V.,Glykos, N.M.,Kokkinidis, M. Structure of M.BseCI DNA methyltransferase from Geobacillus stearothermophilus. To Be Published 0 0 0 0