PDB_ID PUBMED_CID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS CITATION TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 1Y82 Conserved hypothetical protein Pfu-367848-001 from Pyrococcus furiosus 2004-12-10 2005-01-25 Horanyi, P.,Tempel, W.,Habel, J.,Chen, L.,Lee, D.,Nguyen, D.,Chang, S.-H.,Florence, Q.,Zhou, W.,Lin, D.,Zhang, H.,Praissman, J.,Jenney Jr., F.E.,Adams, M.W.W.,Liu, Z.-J.,Rose, J.P.,Wang, B.C.,Southeast Collaboratory for Structural Genomics (SECSG) Conserved hypothetical protein Pfu-367848-001 from Pyrococcus furiosus To be published 0 0 0 0 1YW0 Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13. 2005-02-16 2005-03-15 Vorobiev, S.M.,Abashidze, M.,Forouhar, F.,Kuzin, A.,Xiao, R.,Ciano, M.,Aton, T.B.,Montelione, G.T.,Hunt, J.F.,Tong, L. Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13. To be Published 0 0 0 0 1Z90 17178129 X-ray structure of gene product from arabidopsis thaliana at3g03250, a putative UDP-glucose pyrophosphorylase 2005-03-31 2005-04-12 McCoy, J.G.,Bitto, E.,Bingman, C.A.,Wesenberg, G.E.,Bannen, R.M.,Kondrashov, D.A.,Phillips Jr., G.N. Structure and Dynamics of UDP-Glucose Pyrophosphorylase from Arabidopsis thaliana with Bound UDP-Glucose and UTP. J.Mol.Biol. 2007 366 830 841 1Z2P 15837423 Inositol 1,3,4-trisphosphate 5/6-Kinase in complex with Mg2+/AMP-PCP/Ins(1,3,4)P3 2005-03-08 2005-04-19 Miller, G.J.,Wilson, M.P.,Majerus, P.W.,Hurley, J.H. Specificity determinants in inositol polyphosphate synthesis: crystal structure of inositol 1,3,4-trisphosphate 5/6-kinase. Mol.Cell 2005 18 201 212 1ZVC X-ray structure of allene oxide cyclase from arabidopsis thaliana AT3G25760 2005-06-01 2005-06-14 Center for Eukaryotic Structural Genomics (CESG) X-ray structure of allene oxide cyclase from arabidopsis thaliana AT3G25760 To be published 0 0 0 0 1ZBF 15989951 Crystal structure of B. halodurans RNase H catalytic domain mutant D132N 2005-04-08 2005-07-12 Nowotny, M.,Gaidamakov, S.A.,Crouch, R.J.,Yang, W. Crystal Structures of RNase H Bound to an RNA/DNA Hybrid: Substrate Specificity and Metal-Dependent Catalysis. Cell(Cambridge,Mass.) 2005 121 1005 1016 2A33 17048257 X-Ray Structure of a Lysine Decarboxylase-Like Protein from Arabidopsis Thaliana Gene AT2G37210 2005-06-23 2005-07-19 Jeon, W.B.,Allard, S.T.M.,Bingman, C.A.,Bitto, E.,Han, B.W.,Wesenberg, G.E.,Phillips Jr., G.N. X-ray crystal structures of the conserved hypothetical proteins from Arabidopsis thaliana gene loci At5g11950 and AT2g37210. Proteins 2006 65 1051 1054 1Z0T 15983420 Crystal Structure of A. fulgidus Lon proteolytic domain 2005-03-02 2005-08-02 Dauter, Z.,Botos, I.,LaRonde-LeBlanc, N.,Wlodawer, A. Pathological crystallography: case studies of several unusual macromolecular crystals. Acta Crystallogr.,Sect.D 2005 61 967 975 1ZMH 15894545 Crystal structure of human neutrophil peptide 2, HNP-2 (variant Gly16-> D-Ala) 2005-05-10 2005-08-16 Xie, C.,Prahl, A.,Ericksen, B.,Wu, Z.,Zeng, P.,Li, X.,Lu, W.Y.,Lubkowski, J.,Lu, W. Reconstruction of the conserved beta-bulge in mammalian defensins using D-amino acids. J.Biol.Chem. 2005 280 32921 32929 1ZMI 15894545 Crystal structure of human alpha_defensin-2 (variant GLY16->D-ALA), P 32 2 1 space group ) 2005-05-10 2005-08-16 Xie, C.,Prahl, A.,Ericksen, B.,Wu, Z.,Zeng, P.,Li, X.,Lu, W.Y.,Lubkowski, J.,Lu, W. Reconstruction of the conserved beta-bulge in mammalian defensins using D-amino acids. J.Biol.Chem. 2005 280 32921 32929 1ZMK 15894545 Crystal structure of human alpha-defensin-2 (variant Gly16-> D-ALA), P 42 21 2 space group 2005-05-10 2005-08-16 Xie, C.,Prahl, A.,Ericksen, B.,Wu, Z.,Zeng, P.,Li, X.,Lu, W.Y.,Lubkowski, J.,Lu, W. Reconstruction of the conserved beta-bulge in mammalian defensins using D-amino acids. J.Biol.Chem. 2005 280 32921 32929 2AMY X-Ray Structure of Human Phosphomannomutase 2 (PMM2) 2005-08-10 2005-08-23 Center for Eukaryotic Structural Genomics (CESG) X-Ray Structure of Human Phosphomannomutase 2 (PMM2) To be Published 0 0 0 0 2D09 16239228 A Role for Active Site Water Molecules and Hydroxyl Groups of Substrate for Oxygen Activation in Cytochrome P450 158A2 2005-07-30 2005-10-25 Zhao, B.,Guengerich, F.P.,Voehler, M.,Waterman, M.R. Role of active site water molecules and substrate hydroxyl groups in oxygen activation by cytochrome P450 158A2: a new mechanism of proton transfer J.Biol.Chem. 2005 280 42188 42197 2D0E 16239228 Substrate assited in Oxygen Activation in Cytochrome P450 158A2 2005-08-02 2005-10-25 Zhao, B.,Guengerich, F.P.,Voehler, M.,Waterman, M.R. Role of active site water molecules and substrate hydroxyl groups in oxygen activation by cytochrome P450 158A2: a new mechanism of proton transfer J.Biol.Chem. 2005 280 42188 42197 1Z4S 16355415 Crystal Structure of Gly19 and Glu60 deletion mutant of Human Acidic Fibroblast Growth Factor 2005-03-16 2006-02-07 Lee, J.,Dubey, V.K.,Somasundaram, T.,Blaber, M. Conversion of type I 4:6 to 3:5 beta-turn types in human acidic fibroblast growth factor: Effects upon structure, stability, folding, and mitogenic function. Proteins 2005 62 686 697 2FXQ 17057346 Single-stranded DNA-binding protein from Thermus aquaticus 2006-02-06 2006-02-14 Jedrzejczak, R.,Dauter, M.,Dauter, Z.,Olszewski, M.,Kur, J. Structure of the single-stranded DNA-binding protein SSB from Thermus aquaticus. Acta Crystallogr.,Sect.D 2006 62 1407 1412 2AKM 16411755 Fluoride Inhibition of Enolase: Crystal Structure of the Inhibitory Complex 2005-08-03 2006-03-21 Qin, J.,Chai, G.,Brewer, J.M.,Lovelace, L.L.,Lebioda, L. Fluoride inhibition of enolase: crystal structure and thermodynamics Biochemistry 2006 45 793 800 2AKZ 16411755 Fluoride Inhibition of Enolase: Crystal Structure of the Inhibitory Complex 2005-08-04 2006-03-21 Qin, J.,Chai, G.,Brewer, J.M.,Lovelace, L.L.,Lebioda, L. Fluoride inhibition of enolase: crystal structure and thermodynamics Biochemistry 2006 45 793 800 2EVP 16519512 The Structures of Thiolate- and Carboxylate-Ligated Ferric H93G Myoglobin: Models for Cytochrome P450 and for Oxyanion-Bound Heme Proteins 2005-10-31 2006-03-28 Qin, J.,Perera, R.,Lovelace, L.L.,Dawson, J.H.,Lebioda, L. Structures of Thiolate- and Carboxylate-Ligated Ferric H93G Myoglobin: Models for Cytochrome P450 and for Oxyanion-Bound Heme Proteins(,). Biochemistry 2006 45 3170 3177 2EVK 16519512 The Structures of Thiolate- and Carboxylate-Ligated Ferric H93G Myoglobin: Models for Cytochrome P450 and for Oxyanion-Bound Heme Proteins 2005-10-31 2006-04-18 Qin, J.,Perera, R.,Lovelace, L.L.,Dawson, J.H.,Lebioda, L. Structures of thiolate- and carboxylate-ligated ferric H93G myoglobin: models for cytochrome P450 and for oxyanion-bound heme proteins. Biochemistry 2006 45 3170 3177 2B4Q 16624803 Pseudomonas aeruginosa RhlG/NADP active-site complex 2005-09-26 2006-05-02 Miller, D.J.,Zhang, Y.-M.,Rock, C.O.,White, S.W. Structure of RhlG, an Essential beta-Ketoacyl Reductase in the Rhamnolipid Biosynthetic Pathway of Pseudomonas aeruginosa. J.Biol.Chem. 2006 281 18025 18032 1VS1 Crystal structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase) from Aeropyrum pernix in complex with Mn2+ and PEP 2006-03-09 2006-05-16 Shumilin, I.A.,Zhou, L.,Wu, J.,Woodard, R.W.,Bauerle, R.,Kretsinger, R.H. Crystal structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase) from Aeropyrum pernix in complex with Mn2+ and PEP TO BE PUBLISHED 0 0 0 0 1ZMM 17088326 Crystal structure of human alpha-defensin-4 2005-05-10 2006-05-30 Szyk, A.,Wu, Z.,Tucker, K.,Yang, D.,Lu, W.,Lubkowski, J. Crystal structures of human {alpha}-defensins HNP4, HD5, and HD6. Protein Sci. 2006 15 2749 2760 1ZMP 17088326 Crystal structure of human defensin-5 2005-05-10 2006-05-30 Szyk, A.,Wu, Z.,Tucker, K.,Yang, D.,Lu, W.,Lubkowski, J. Crystal structures of human {alpha}-defensins HNP4, HD5, and HD6. Protein Sci. 2006 15 2749 2760 1ZMQ 17088326 Crystal structure of human alpha-defensin-6 2005-05-10 2006-05-30 Szyk, A.,Wu, Z.,Tucker, K.,Yang, D.,Lu, W.,Lubkowski, J. Crystal structures of human {alpha}-defensins HNP4, HD5, and HD6. Protein Sci. 2006 15 2749 2760 1ZWH Yeast Hsp82 in complex with the novel Hsp90 inhibitor Radester amine 2005-06-03 2006-06-13 Immormino, R.M.,Blagg, B.S.,Gewirth, D.T. Inhibitory Ligands Adopt Different Conformations When Bound to Hsp90 or GRP94: Implications for Paralog-specific Drug Design To be Published 0 0 0 0 2C7X 16825192 Crystal structure of narbomycin-bound cytochrome P450 PikC (CYP107L1) 2005-11-29 2006-07-03 Sherman, D.H.,Li, S.,Yermalitskaya, L.V.,Kim, Y.,Smith, J.A.,Waterman, M.R.,Podust, L.M. The Structural Basis for Substrate Anchoring, Active Site Selectivity, and Product Formation by P450 Pikc from Streptomyces Venezuelae. J.Biol.Chem. 2006 281 26289 0 2F1N 16809347 Structure of CdtB, the biologically active subunit of Cytolethal Distending Toxin 2005-11-14 2006-07-04 Hontz, J.S.,Villar-Lecumberri, M.T.,Potter, B.M.,Yoder, M.D.,Dreyfus, L.A.,Laity, J.H. Differences in Crystal and Solution Structures of the Cytolethal Distending Toxin B Subunit: RELEVANCE TO NUCLEAR TRANSLOCATION AND FUNCTIONAL ACTIVATION. J.Biol.Chem. 2006 281 25365 25372 2G2Q 16840349 The crystal structure of G4, the poxviral disulfide oxidoreductase essential for cytoplasmic disulfide bond formation 2006-02-16 2006-08-01 Su, H.P.,Lin, D.Y.,Garboczi, D.N. The structure of G4, the poxvirus disulfide oxidoreductase essential for virus maturation and infectivity. J.Virol. 2006 80 7706 7713 2NLE 17071614 Human beta-defensin-1 (Mutant Gln11Ala) 2006-10-20 2006-10-31 Pazgier, M.,Prahl, A.,Hoover, D.M.,Lubkowski, J. Studies of the Biological Properties of Human beta-Defensin 1. J.Biol.Chem. 2007 282 1819 1829 2NLS 17071614 Human beta-defensin-1 (Mutant Gln24Ala) 2006-10-20 2006-10-31 Pazgier, M.,Prahl, A.,Hoover, D.M.,Lubkowski, J. Studies of the Biological Properties of Human beta-Defensin 1. J.Biol.Chem. 2007 282 1819 1829 2EXX 17496144 Crystal structure of HSCARG from Homo sapiens in complex with NADP 2005-11-09 2006-11-21 Zheng, X.,Dai, X.,Zhao, Y.,Chen, Q.,Lu, F.,Yao, D.,Yu, Q.,Liu, X.,Zhang, C.,Gu, X.,Luo, M. Restructuring of the dinucleotide-binding fold in an NADP(H) sensor protein. Proc.Natl.Acad.Sci.USA 2007 104 8809 8814 2F48 Crystal Structure of A Novel Fructose 1,6-Bisphosphate and AlF3 containing Pyrophosphate-dependent Phosphofructo-1-kinase Complex from Borrelia burgdorferi 2005-11-22 2006-11-28 Wang, M.,Grum-Tokars, V. Crystal Structure of A Novel Fructose 1,6-Bisphosphate and AlF3 containing Pyrophosphate-dependent Phosphofructo-1-kinase Complex from Borrelia burgdorferi TO BE PUBLISHED 0 0 0 0 2I9A 16979660 Crystal structure of the free aminoterminal fragment of urokinase type plasminogen activator (ATF) 2006-09-05 2006-11-28 Barinka, C.,Parry, G.,Callahan, J.,Shaw, D.E.,Kuo, A.,Bdeir, K.,Cines, D.B.,Mazar, A.,Lubkowski, J. Structural basis of interaction between urokinase-type plasminogen activator and its receptor. J.Mol.Biol. 2006 363 482 495 2BZ9 17846131 Ligand-free structure of sterol 14alpha-demethylase from Mycobacterium tuberculosis in P2(1) space group 2005-08-12 2006-12-07 Podust, L.M.,Von Kries, J.P.,Eddine, A.N.,Kim, Y.,Yermalitskaya, L.V.,Kuehne, R.,Ouellet, H.,Warrier, T.,Altekoster, M.,Lee, J.-S.,Rademann, J.,Oschkinat, H.,Kaufmann, S.H.E.,Waterman, M.R. Small Molecule Scaffolds for Cyp51 Inhibitors Identified by High Throughput Screening and Defined by X-Ray Crystallography Antimicrob.Agents Chemother. 2007 51 3915 0 2CA0 Crystal structure of YC-17-bound cytochrome P450 PikC (CYP107L1) 2005-12-15 2006-12-13 Yermalitskaya, L.I.,Kim, Y.,Sherman, D.H.,Waterman, M.R.,Podust, L.M. Crystal Structure of Yc-17-Bound Cytochrome P450 Pikc (Cyp107L1) To be Published 0 0 0 0 2IDJ 17158459 Crystal Structure of Rat Glycine N-Methyltransferase Apoprotein, Monoclinic Form 2006-09-15 2006-12-19 Luka, Z.,Pakhomova, S.,Loukachevitch, L.V.,Egli, M.,Newcomer, M.E.,Wagner, C. 5-methyltetrahydrofolate is bound in intersubunit areas of rat liver folate-binding protein glycine N-methyltransferase. J.Biol.Chem. 2007 282 4069 4075 2IDK 17158459 Crystal Structure of Rat Glycine N-Methyltransferase Complexed With Folate 2006-09-15 2006-12-19 Luka, Z.,Pakhomova, S.,Loukachevitch, L.V.,Egli, M.,Newcomer, M.E.,Wagner, C. 5-methyltetrahydrofolate is bound in intersubunit areas of rat liver folate-binding protein glycine N-methyltransferase. J.Biol.Chem. 2007 282 4069 4075 2I9B 16979660 Crystal structure of ATF-urokinase receptor complex 2006-09-05 2007-01-02 Barinka, C.,Parry, G.,Callahan, J.,Shaw, D.E.,Kuo, A.,Bdeir, K.,Cines, D.B.,Mazar, A.,Lubkowski, J. Structural basis of interaction between urokinase-type plasminogen activator and its receptor. J.Mol.Biol. 2006 363 482 495 2IEJ 17208314 Human Protein Farnesyltransferase Complexed with Inhibitor Compound STN-48 And FPP Analog at 1.8A Resolution 2006-09-19 2007-01-23 Eastman, R.T.,White, J.,Hucke, O.,Yokoyama, K.,Verlinde, C.L.,Hast, M.A.,Beese, L.S.,Gelb, M.H.,Rathod, P.K.,Van Voorhis, W.C. Resistance mutations at the lipid substrate binding site of Plasmodium falciparum protein farnesyltransferase. Mol.Biochem.Parasitol. 2007 152 66 71 2FXS 19361515 Yeast HSP82 in complex with the novel HSP90 Inhibitor Radamide 2006-02-06 2007-02-06 Immormino, R.M.,Metzger, L.E.,Reardon, P.N.,Dollins, D.E.,Blagg, B.S.,Gewirth, D.T. Different poses for ligand and chaperone in inhibitor-bound Hsp90 and GRP94: implications for paralog-specific drug design. J.Mol.Biol. 2009 388 1033 1042 2FYP GRP94 in complex with the novel HSP90 Inhibitor Radester amine 2006-02-08 2007-02-06 Immormino, R.M.,Gewirth, D.T.,Blagg, B.S. Inhibittory Ligands Adopt Different Conformations When Bound to Hsp90 or GRP94: Implications for Paralog-specific Drug Design To be Published 0 0 0 0 2ODP 17234210 Complement component C2a, the catalytic fragment of C3- and C5-convertase of human complement 2006-12-25 2007-02-06 Krishnan, V.,Xu, Y.,Macon, K.,Volanakis, J.E.,Narayana, S.V. The crystal structure of c2a, the catalytic fragment of classical pathway c3 and c5 convertase of human complement. J.Mol.Biol. 2007 367 224 233 2NO9 17158155 The structure of deoxycytidine kinase complexed with troxacitabine and ADP. 2006-10-25 2007-02-13 Sabini, E.,Hazra, S.,Konrad, M.,Burley, S.K.,Lavie, A. Structural basis for activation of the therapeutic L-nucleoside analogs 3TC and troxacitabine by human deoxycytidine kinase. Nucleic Acids Res. 2007 35 186 192 2NOA 17158155 The structure of deoxycytidine kinase complexed with lamivudine and ADP. 2006-10-25 2007-02-13 Sabini, E.,Hazra, S.,Konrad, M.,Burley, S.K.,Lavie, A. Structural basis for activation of the therapeutic L-nucleoside analogs 3TC and troxacitabine by human deoxycytidine kinase. Nucleic Acids Res. 2007 35 186 192 2OT0 17329259 Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with a C-terminal peptide of Wiskott-Aldrich syndrome protein 2007-02-07 2007-02-27 St-Jean, M.,Izard, T.,Sygusch, J. A hydrophobic pocket in the active site of glycolytic aldolase mediates interactions with wiskott-Aldrich syndrome protein. J.Biol.Chem. 2007 282 14309 14315 2GOX 17351618 Crystal structure of Efb-C / C3d Complex 2006-04-14 2007-03-20 Hammel, M.,Sfyroera, G.,Ricklin, D.,Magotti, P.,Lambris, J.D.,Geisbrecht, B.V. A structural basis for complement inhibition by Staphylococcus aureus. Nat.Immunol. 2007 8 430 437 2IOY 18373848 Crystal structure of Thermoanaerobacter tengcongensis ribose binding protein 2006-10-11 2007-03-20 Cuneo, M.J.,Tian, Y.,Allert, M.,Hellinga, H.W. The backbone structure of the thermophilic Thermoanaerobacter tengcongensis ribose binding protein is essentially identical to its mesophilic E. coli homolog. Bmc Struct.Biol. 2008 8 20 20 2OOT 17329803 A High Resolution Structure of Ligand-free Human Glutamate Carboxypeptidase II 2007-01-26 2007-03-20 Barinka, C.,Starkova, J.,Konvalinka, J.,Lubkowski, J. A high-resolution structure of ligand-free human glutamate carboxypeptidase II. Acta Crystallogr.,Sect.F 2007 63 150 153 2ORV 17407781 human Thymidine Kinase 1 in complex with TP4A 2007-02-04 2007-03-27 Segura-Pena, D.,Lutz, S.,Monnerjahn, C.,Konrad, M.,Lavie, A. Binding of ATP to TK1-like Enzymes Is Associated with a Conformational Change in the Quaternary Structure. J.Mol.Biol. 2007 369 129 141 2ORW 17407781 Thermotoga maritima thymidine kinase 1 like enzyme in complex with TP4A 2007-02-04 2007-03-27 Segura-Pena, D.,Lutz, S.,Monnerjahn, C.,Konrad, M.,Lavie, A. Binding of ATP to TK1-like Enzymes Is Associated with a Conformational Change in the Quaternary Structure. J.Mol.Biol. 2007 369 129 141 2GFD 19361515 GRP94 in complex with the novel HSP90 Inhibitor Radamide 2006-03-21 2007-04-03 Immormino, R.M.,Metzger, L.E.,Reardon, P.N.,Dollins, D.E.,Blagg, B.S.,Gewirth, D.T. Different poses for ligand and chaperone in inhibitor-bound Hsp90 and GRP94: implications for paralog-specific drug design. J.Mol.Biol. 2009 388 1033 1042 2GQP N-Domain Of Grp94 In Complex With the Novel Ligand N-Propyl Carboxyamido Adenosine 2006-04-21 2007-04-03 Immormino, R.M.,Gewirth, D.T. Adensine Scaffold inhibitors of GRP94 To be Published 0 0 0 0 2OFW 17276460 Crystal structure of the APSK domain of human PAPSS1 complexed with 2 APS molecules 2007-01-04 2007-04-10 Sekulic, N.,Dietrich, K.,Paarmann, I.,Ort, S.,Konrad, M.,Lavie, A. Elucidation of the Active Conformation of the APS-Kinase Domain of Human PAPS Synthetase 1. J.Mol.Biol. 2007 367 488 500 2OFX 17276460 crystal structure of the APSK domain of human PAPSS1 in complex with ADPMg and PAPS 2007-01-04 2007-04-10 Sekulic, N.,Dietrich, K.,Paarmann, I.,Ort, S.,Konrad, M.,Lavie, A. Elucidation of the Active Conformation of the APS-Kinase Domain of Human PAPS Synthetase 1. J.Mol.Biol. 2007 367 488 500 2ONB 17297914 Human Thymidylate Synthase at low salt conditions with PDPA bound 2007-01-23 2007-04-10 Lovelace, L.L.,Gibson, L.M.,Lebioda, L. Cooperative Inhibition of Human Thymidylate Synthase by Mixtures of Active Site Binding and Allosteric Inhibitors Biochemistry 2007 46 2823 2830 2DKK 17614370 Structure/Function studies of Cytochrome P450 158A1 from Streptomyces Coelicolor A3(2) 2006-04-12 2007-04-17 Zhao, B.,Lamb, D.C.,Lei, L.,Kelly, S.L.,Yuan, H.,Hachey, D.L.,Waterman, M.R. Different binding modes of two flaviolin substrate molecules in cytochrome P450 158A1 (CYP158A1) compared to CYP158A2. Biochemistry 2007 46 8725 8733 2P5Y Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD 2007-03-16 2007-04-17 Fu, Z.-Q.,Chen, L.,Ebihara, A.,Shinkai, A.,Kuramitsu, S.,Yokoyama, S.,Zhu, J.,Swindell, J.T.,Chrzas, J.,Rose, J.P.,Wang, B.-C. Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD To be Published 0 0 0 0 2H0G Crystal Structure of DsbG T200M mutant 2006-05-15 2007-04-24 Hiniker, A.,Heras, B.,Jobson, R.W.,Laurinec, S.,Martin, J.L.,Stuckey, J.,Bardwell, J.C.A. Short-circuiting divergent evolution: laboratory evolution of one disulfide isomerase to resemble another To be Published 0 0 0 0 2H0H Crystal Structure of DsbG K113E mutant 2006-05-15 2007-04-24 Hiniker, A.,Heras, B.,Jobson, R.W.,Laurinec, S.,Martin, J.L.,Stuckey, J.,Bardwell, J.C.A. Short-circuiting divergent evolution: laboratory evolution of one disulfide isomerase to resemble another To be Published 0 0 0 0 2H0I Crystal Structure of DsbG V216M mutant 2006-05-15 2007-04-24 Hiniker, A.,Heras, B.,Jobson, R.W.,Laurinec, S.,Martin, J.L.,Stuckey, J.,Bardwell, J.C.A. Short-circuiting divergent evolution: laboratory evolution of one disulfide isomerase to resemble another To be Published 0 0 0 0 2H8M N-Domain Of Grp94 In Complex With the 2-Iodo-NECA 2006-06-07 2007-04-24 Immormino, R.M.,Gewirth, D.T. N-Domain Of Grp94 In Complex With the 2-Iodo-NECA To be Published 0 0 0 0 2P91 Crystal structure of Enoyl-[acyl-carrier-protein] reductase (NADH) from Aquifex aeolicus VF5 2007-03-23 2007-04-24 Chen, L.,Li, Y.,Ebihara, A.,Shinkai, A.,Kuramitsu, S.,Yokoyama, S.,Zhao, M.,Rose, J.P.,Wang, B.-C. Crystal structure of Enoyl-[acyl-carrier-protein] reductase (NADH) from Aquifex aeolicus VF5 To be Published 0 0 0 0 2P3E Crystal structure of AQ1208 from Aquifex aeolicus 2007-03-08 2007-05-01 Zhu, J.,Swindell II, J.T.,Chen, L.,Ebihara, A.,Shinkai, A.,Kuramitsu, S.,Yokoyama, S.,Fu, Z.-Q.,Rose, J.P.,Wang, B.-C. To be Published To be Published 0 0 0 0 2JHS 17452789 CRYSTAL STRUCTURE OF RHOGDI K135H,K138H,K141H MUTANT 2007-02-23 2007-05-08 Cooper, D.R.,Boczek, T.,Grelewska, K.,Pinkowska, M.,Sikorska, M.,Zawadzki, M.,Derewenda, Z.S. Protein Crystallization by Surface Entropy Reduction: Optimization of the Ser Strategy Acta Crystallogr.,Sect.D 2007 63 636 0 2JHX 17452789 CRYSTAL STRUCTURE OF RHOGDI E155H, E157H MUTANT 2007-02-23 2007-05-08 Cooper, D.R.,Boczek, T.,Grelewska, K.,Pinkowska, M.,Sikorska, M.,Zawadzki, M.,Derewenda, Z.S. Protein Crystallization by Surface Entropy Reduction: Optimization of the Ser Strategy Acta Crystallogr.,Sect.D 2007 63 636 0 2PG0 Crystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilus 2007-04-06 2007-05-08 Chen, L.,Chen, L.-Q.,Ebihara, A.,Shinkai, A.,Kuramitsu, S.,Yokoyama, S.,Zhao, M.,Li, Y.,Fu, Z.-Q.,Rose, J.P.,Wang, B.-C. Crystal structure of acyl-CoA dehydrogenase from G. kaustophilus To be Published 0 0 0 0 2PH3 Crystal structure of 3-oxoacyl-[acyl carrier protein] reductase TTHA0415 from Thermus thermophilus 2007-04-10 2007-05-08 Swindell II, J.T.,Chen, L.,Zhu, J.,Ebihara, A.,Shinkai, A.,Kuramitsu, S.,Yokoyama, S.,Fu, Z.-Q.,Chrzas, J.,Rose, J.P.,Wang, B.C. Crystal structure of 3-oxoacyl-[acyl carrier protein] reductase TTHA0415 from Thermus thermophilus To be Published 0 0 0 0 2HIM 17451745 Crystal Structure and Allosteric Regulation of the Cytoplasmic Escherichia coli L-Asparaginase I 2006-06-29 2007-05-15 Yun, M.K.,Nourse, A.,White, S.W.,Rock, C.O.,Heath, R.J. Crystal Structure and Allosteric Regulation of the Cytoplasmic Escherichia coli L-Asparaginase I. J.Mol.Biol. 2007 369 794 811 2EKE 17475278 Structure of a SUMO-binding-motif mimic bound to Smt3p-Ubc9p: conservation of a noncovalent Ubiquitin-like protein-E2 complex as a platform for selective interactions within a SUMO pathway 2007-03-23 2007-05-29 Duda, D.M.,van Waardenburg, R.C.A.M.,Borg, L.A.,McGarity, S.,Nourse, A.,Waddell, M.B.,Bjornsti, M.A.,Schulman, B.A. Structure of a SUMO-binding-motif Mimic Bound to Smt3p-Ubc9p: Conservation of a Non-covalent Ubiquitin-like Protein-E2 Complex as a Platform for Selective Interactions within a SUMO Pathway J.Mol.Biol. 2007 369 619 630 2PEY 17540769 Crystal structure of deletion mutant of APS-kinase domain of human PAPS-synthetase 1 2007-04-03 2007-05-29 Sekulic, N.,Konrad, M.,Lavie, A. Structural mechanism for substrate inhibition of the adenosine 5'-phosphosulfate kinase domain of human 3'-phosphoadenosine 5'-phosphosulfate synthetase 1 and its ramifications for enzyme regulation. J.Biol.Chem. 2007 282 22112 22121 2PEZ 17540769 Crystal structrue of deletion mutant of APS-kinase domain of human PAPS-synthetase 1 in complex with cyclic PAPS and dADP 2007-04-03 2007-05-29 Sekulic, N.,Konrad, M.,Lavie, A. Structural mechanism for substrate inhibition of the adenosine 5'-phosphosulfate kinase domain of human 3'-phosphoadenosine 5'-phosphosulfate synthetase 1 and its ramifications for enzyme regulation. J.Biol.Chem. 2007 282 22112 22121 2PLZ 17452329 Arg-modified human beta-defensin 1 (HBD1) 2007-04-20 2007-05-29 Zou, G.,de Leeuw, E.,Li, C.,Pazgier, M.,Li, C.,Zeng, P.,Lu, W.Y.,Lubkowski, J.,Lu, W. Toward understanding the cationicity of defensins. Arg and Lys versus their noncoded analogs. J.Biol.Chem. 2007 282 19653 19665 2PM1 Derivative of human alpha-defensin 1 (HNP1) 2007-04-20 2007-05-29 Lubkowski, J.,Lu, W.,Zou, G.,de Leeuw, E.,Li, C.,Pazgier, M.,Zeng, P.,Lu, W.Y. Derivative of human alpha-defensin 1 (HNP1) To be Published 0 0 0 0 2P22 17442384 Structure of the Yeast ESCRT-I Heterotetramer Core 2007-03-06 2007-06-05 Kostelansky, M.S.,Schluter, C.,Tam, Y.Y.,Lee, S.,Ghirlando, R.,Beach, B.,Conibear, E.,Hurley, J.H. Molecular architecture and functional model of the complete yeast ESCRT-I heterotetramer. Cell(Cambridge,Mass.) 2007 129 485 498 2P22 17442384 Structure of the Yeast ESCRT-I Heterotetramer Core 2007-03-06 2007-06-05 Kostelansky, M.S.,Schluter, C.,Tam, Y.Y.,Lee, S.,Ghirlando, R.,Beach, B.,Conibear, E.,Hurley, J.H. Molecular architecture and functional model of the complete yeast ESCRT-I heterotetramer. Cell(Cambridge,Mass.) 2007 129 485 498 2HW9 17570396 Crystal structure of Lys12Cys/Cys117Val mutant of human acidic fibroblast Growth factor at 1.60 angstrom resolution. 2006-08-01 2007-06-12 Dubey, V.K.,Lee, J.,Somasundaram, T.,Blaber, S.,Blaber, M. Spackling the crack: stabilizing human fibroblast growth factor-1 by targeting the N and C terminus beta-strand interactions. J.Mol.Biol. 2007 371 256 268 2HWA 17570396 Crystal structure of Lys12Thr/Cys117Val mutant of human acidic fibroblast growth factor at 1.65 angstrom resolution. 2006-08-01 2007-06-12 Dubey, V.K.,Lee, J.,Somasundaram, T.,Blaber, S.,Blaber, M. Spackling the crack: stabilizing human fibroblast growth factor-1 by targeting the N and C terminus beta-strand interactions. J.Mol.Biol. 2007 371 256 268 2HWM 17570396 Crystal structure of Lys12Val/Cys117Val mutant of human acidic fibroblast growth factor at 1.60 angstrom resolution 2006-08-01 2007-06-12 Dubey, V.K.,Lee, J.,Somasundaram, T.,Blaber, S.,Blaber, M. Spackling the crack: stabilizing human fibroblast growth factor-1 by targeting the N and C terminus beta-strand interactions. J.Mol.Biol. 2007 371 256 268 2OR4 17567119 A high resolution crystal structure of human glutamate carboxypeptidase II in complex with quisqualic acid 2007-02-01 2007-06-12 Barinka, C.,Rovenska, M.,Mlcochova, P.,Hlouchova, K.,Plechanovova, A.,Majer, P.,Tsukamoto, T.,Slusher, B.S.,Konvalinka, J.,Lubkowski, J. Structural insight into the pharmacophore pocket of human glutamate carboxypeptidase II. J.Med.Chem. 2007 50 3267 3273 2PE4 17503783 Structure of Human Hyaluronidase 1, a Hyaluronan Hydrolyzing Enzyme Involved in Tumor Growth and Angiogenesis 2007-04-02 2007-06-12 Chao, K.L.,Muthukumar, L.,Herzberg, O. Structure of Human Hyaluronidase-1, a Hyaluronan Hydrolyzing Enzyme Involved in Tumor Growth and Angiogenesis Biochemistry 2007 46 6911 6920 2DWU 17610893 Crystal Structure of Glutamate Racemase Isoform RacE1 from Bacillus anthracis 2006-08-17 2007-06-19 May, M.,Mehboob, S.,Mulhearn, D.C.,Wang, Z.,Yu, H.,Thatcher, G.R.J.,Santarsiero, B.D.,Johnson, M.E.,Mesecar, A.D. Structural and Functional Analysis of Two Glutamate Racemase Isozymes from Bacillus anthracis and Implications for Inhibitor Design J.Mol.Biol. 2007 371 1219 1237 2H8R 17924661 Hepatocyte Nuclear Factor 1b bound to DNA: MODY5 Gene Product 2006-06-07 2007-06-19 Lu, P.,Rha, G.B.,Chi, Y.I. Structural basis of disease-causing mutations in hepatocyte nuclear factor 1beta. Biochemistry 2007 46 12071 12080 2HZ9 17570396 Crystal structure of Lys12Val/Asn95Val/Cys117Val mutant of human acidic fibroblast growth factor at 1.70 angstrom resolution. 2006-08-08 2007-06-19 Dubey, V.K.,Lee, J.,Somasundaram, T.,Blaber, S.,Blaber, M. Spackling the Crack: Stabilizing Human Fibroblast Growth Factor-1 by Targeting the N and C terminus beta-Strand Interactions J.Mol.Biol. 2007 371 256 268 2I8U 17371001 GDP-mannose mannosyl hydrolase-calcium-GDP product complex 2006-09-03 2007-06-19 Zou, Y.,Li, C.,Brunzelle, J.S.,Nair, S.K. Molecular basis for substrate selectivity and specificity by an LPS biosynthetic enzyme Biochemistry 2007 46 4294 4304 2H9B 19400783 Crystal structure of the effector binding domain of a BenM variant (BenM R156H/T157S) 2006-06-09 2007-06-26 Craven, S.H.,Ezezika, O.C.,Haddad, S.,Hall, R.A.,Momany, C.,Neidle, E.L. Inducer responses of BenM, a LysR-type transcriptional regulator from Acinetobacter baylyi ADP1. Mol.Microbiol. 2009 72 881 894 2NO0 17530837 C4S dCK variant of dCK in complex with gemcitabine+ADP 2006-10-24 2007-07-03 Sabini, E.,Hazra, S.,Konrad, M.,Lavie, A. Nonenantioselectivity Property of Human Deoxycytidine Kinase Explained by Structures of the Enzyme in Complex with l- and d-Nucleosides. J.Med.Chem. 2007 50 3004 3014 2NO1 17530837 C4S dCK variant of dCK in complex with D-dC+ADP 2006-10-24 2007-07-03 Sabini, E.,Hazra, S.,Konrad, M.,Lavie, A. Nonenantioselectivity Property of Human Deoxycytidine Kinase Explained by Structures of the Enzyme in Complex with l- and d-Nucleosides. J.Med.Chem. 2007 50 3004 3014 2NO6 17530837 C4S dCK variant of dCK in complex with FTC+ADP 2006-10-25 2007-07-03 Sabini, E.,Hazra, S.,Konrad, M.,Lavie, A. Nonenantioselectivity Property of Human Deoxycytidine Kinase Explained by Structures of the Enzyme in Complex with l- and d-Nucleosides. J.Med.Chem. 2007 50 3004 3014 2NO7 17530837 C4S dCK variant of dCK in complex with L-dC+ADP 2006-10-25 2007-07-03 Sabini, E.,Hazra, S.,Konrad, M.,Lavie, A. Nonenantioselectivity Property of Human Deoxycytidine Kinase Explained by Structures of the Enzyme in Complex with l- and d-Nucleosides. J.Med.Chem. 2007 50 3004 3014 2NZ5 17614370 Structure and Function Studies of Cytochrome P450 158A1 from Streptomyces coelicolor A3(2) 2006-11-22 2007-07-03 Zhao, B.,Lamb, D.C.,Lei, L.,Kelly, S.L.,Yuan, H.,Hachey, D.L.,Waterman, M.R. Different binding modes of two flaviolin substrate molecules in cytochrome P450 158A1 (CYP158A1) compared to CYP158A2. Biochemistry 2007 46 8725 8733 2NZA 17614370 Structure and Function Studies of Cytochrome P450 158A1 from Streptomyces coelicolor A3(2) 2006-11-22 2007-07-03 Zhao, B.,Lamb, D.C.,Lei, L.,Kelly, S.L.,Yuan, H.,Hachey, D.L.,Waterman, M.R. Different binding modes of two flaviolin substrate molecules in cytochrome P450 158A1 (CYP158A1) compared to CYP158A2. Biochemistry 2007 46 8725 8733 2P9M Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661 2007-03-26 2007-07-03 Zhao, M.,Ebihara, A.,Shinkai, A.,Kuramitsu, S.,Yokoyama, S.,Zhu, J.,Swindell II, J.T.,Chen, L.,Fu, Z.-Q.,Charz, J.,Rose, J.P.,Wang, B.-C. Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661 To be Published 0 0 0 0 2Q7K 17591767 The Androgen Receptor Prostate Cancer Mutant H874Y Ligand Binding Domain Bound with Testosterone and an AR 20-30 Peptide 2007-06-07 2007-07-24 Askew, E.B.,Gampe, R.T.,Stanley, T.B.,Faggart, J.L.,Wilson, E.M. Modulation of androgen receptor activation function 2 by testosterone and dihydrotestosterone. J.Biol.Chem. 2007 282 25801 25816 2Q12 17581628 Crystal Structure of BAR domain of APPL1 2007-05-23 2007-08-14 Zhu, G.,Chen, J.,Liu, J.,Brunzelle, J.S.,Huang, B.,Wakeham, N.,Terzyan, S.,Li, X.,Rao, Z.,Li, G.,Zhang, X.C. Structure of the APPL1 BAR-PH domain and characterization of its interaction with Rab5. Embo J. 2007 26 3484 3493 2QTC 17635929 E. coli Pyruvate dehydrogenase E1 component E401K mutant with phosphonolactylthiamin diphosphate 2007-08-01 2007-08-14 Kale, S.,Arjunan, P.,Furey, W.,Jordan, F. A Dynamic Loop at the Active Center of the Escherichia coli Pyruvate Dehydrogenase Complex E1 Component Modulates Substrate Utilization and Chemical Communication with the E2 Component J.Biol.Chem. 2007 282 28106 28116 2P9R 17608619 Human alpha2-macroglogulin is composed of multiple domains, as predicted by homology with complement component C3 2007-03-26 2007-08-21 Doan, N.,Gettins, P.G. Human alpha2-macroglobulin is composed of multiple domains, as predicted by homology with complement component C3. Biochem.J. 2007 407 23 30 2EJ5 Crystal structure of GK2038 protein (enoyl-CoA hydratase subunit II) from Geobacillus kaustophilus 2007-03-15 2007-09-18 Okazaki, N.,Agari, Y.,Ebihara, A.,Chen, L.,Fu, Z.Q.,Chrzas, J.,Wang, B.C.,Kuramitsu, S.,Yamamoto, M.,Yokoyama, S. Crystal structure of GK2038 protein (enoyl-CoA hydratase subunit II) from Geobacillus kaustophilus To be Published 0 0 0 0 2UWE 17825839 Large CDR3a loop alteration as a function of MHC mutation 2007-03-20 2007-09-25 Miller, P.J.,Pazy, Y.,Conti, B.,Riddle, D.,Appella, E.,Collins, E.J. Single Mhc Mutation Eliminates Enthalpy Associated with T Cell Receptor Binding. J.Mol.Biol. 2007 373 315 0 2PNJ 17567154 Crystal structure of human ferrochelatase mutant with Phe 337 replaced by Ala 2007-04-24 2007-10-02 Dailey, H.A.,Wu, C.-K.,Horanyi, P.,Medlock, A.E.,Najahi-Missaoui, W.,Burden, A.E.,Dailey, T.A.,Rose, J.P. Altered orientation of active site residues in variants of human ferrochelatase. Evidence for a hydrogen bond network involved in catalysis Biochemistry 2007 46 7973 7979 2YR1 Crystal Structure of 3-dehydroquinate dehydratase from Geobacillus kaustophilus HTA426 2007-04-01 2007-10-02 Kagawa, W.,Kurumizaka, H.,Bessho, Y.,Chen, L.,Fu, Z.Q.,Chrzas, J.,Wang, B.C.,Yokoyama, S. Crystal Structure of 3-dehydroquinate dehydratase from Geobacillus kaustophilus HTA426 To be published 0 0 0 0 2IIH Crystal structure of the molybdenum cofactor biosynthesis protein C (TTHA1789) from thermus theromophilus HB8 (H32 form) 2006-09-28 2007-10-09 Jeyakanthan, J.,Kanaujia, S.P.,Vasuki Ranjani, C.,Sekar, K.,Baba, S.,Chen, L.,Liu, Z.-J.,Wang, B.-C.,Ebihara, A.,Kuramitsu, S.,Shinkai, A.,Shiro, Y.,Yokoyama, S. Crystal structure of the molybdenum cofactor biosynthesis protein C (TTHA1789) from thermus theromophilus HB8 (H32 form) To be Published 0 0 0 0 2JCC 17825839 AH3 recognition of mutant HLA-A2 W167A 2006-12-21 2007-10-09 Miller, P.,Pazy, Y.,Conti, B.,Riddle, D.,Appella, E.,Collins, E.J. Single Mhc Mutation Eliminates Enthalpy Associated with T Cell Receptor Binding. J.Mol.Biol. 2007 373 315 0 2YSW Crystal Structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5 2007-04-04 2007-10-09 Kumarevel, T.S.,Tanaka, T.,Kuramitsu, S.,Yokoyama, S. Crystal Structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5 To be Published 0 0 0 0 2QQ0 18073106 Thymidine Kinase from Thermotoga Maritima in complex with thymidine + AppNHp 2007-07-25 2007-10-16 Segura-Pena, D.,Lichter, J.,Trani, M.,Konrad, M.,Lavie, A.,Lutz, S. Quaternary structure change as a mechanism for the regulation of thymidine kinase 1-like enzymes. Structure 2007 15 1555 1566 2YX5 Crystal Structure of Methanocaldococcus jannaschii PurS, One of the Subunits of Formylglycinamide Ribonucleotide Amidotransferase in the Purine Biosynthetic Pathway 2007-04-24 2007-10-30 Kanagawa, M.,Baba, S.,Agari, Y.,Chen, L.Q.,Fu, Z.-Q.,Chrzas, J.,Wang, B.C.,Kuramitsu, S.,Yokoyama, S.,Kawai, G.,Sampei, G. Crystal Structure of Methanocaldococcus jannaschii PurS, One of the Subunits of Formylglycinamide Ribonucleotide Amidotransferase in the Purine Biosynthetic Pathway To be Published 0 0 0 0 2YZR Crystal structure of pyridoxine biosynthesis protein from Methanocaldococcus jannaschii 2007-05-06 2007-11-06 Manzoku, M.,Ebihara, A.,Chen, L.,Fu, Z.-Q.,Chrzas, J.,Wang, B.-C.,Yokoyama, S.,Kuramitsu, S. Crystal structure of pyridoxine biosynthesis protein from Methanocaldococcus jannaschii to be published 0 0 0 0 2O2C 18561188 Crystal structure of phosphoglucose isomerase from T. brucei containing glucose-6-phosphate in the active site 2006-11-29 2007-11-13 Arsenieva, D.,Appavu, B.L.,Mazock, G.H.,Jeffery, C.J. Crystal structure of phosphoglucose isomerase from Trypanosoma brucei complexed with glucose-6-phosphate at 1.6 A resolution Proteins 2008 74 72 80 2QOM 17994105 The crystal structure of the E.coli EspP autotransporter Beta-domain. 2007-07-20 2007-11-13 Barnard, T.J.,Dautin, N.,Lukacik, P.,Bernstein, H.D.,Buchanan, S.K. Autotransporter structure reveals intra-barrel cleavage followed by conformational changes. Nat.Struct.Mol.Biol. 2007 14 1214 1220 2Z0M Crystal structure of hypothetical ATP-dependent RNA helicase from Sulfolobus tokodaii 2007-05-07 2007-11-13 Nakagawa, N.,Kusano, S.,Shirouzu, M.,Chen, L.,Fu, Z.-Q.,Chrzas, J.,Wang, B.-C.,Yokoyama, S.,Kuramitsu, S. Crystal structure of hypothetical ATP-dependent RNA helicase from Sulfolobus tokodaii To be Published 0 0 0 0 2ZBV Crystal structure of uncharacterized conserved protein from Thermotoga maritima 2007-10-30 2007-11-13 Ebihara, A.,Fujimoto, Y.,Kagawa, W.,Fujikawa, N.,Chen, L.,Fu, Z.Q.,Chrzas, J.,Wang, B.C.,Yokoyama, S.,Kuramitsu, S. Crystal structure of uncharacterized conserved protein from Thermotoga maritima To be Published 0 0 0 0 2R5P 18092815 Crystal Structure Analysis of HIV-1 Subtype C Protease Complexed with Indinavir 2007-09-04 2007-11-20 Coman, R.M.,Robbins, A.H.,Fernandez, M.A.,Gilliland, C.T.,Sochet, A.A.,Goodenow, M.M.,McKenna, R.,Dunn, B.M. The Contribution of Naturally Occurring Polymorphisms in Altering the Biochemical and Structural Characteristics of HIV-1 Subtype C Protease Biochemistry 2008 47 731 743 2R5Q 18092815 Crystal Structure Analysis of HIV-1 Subtype C Protease Complexed with Nelfinavir 2007-09-04 2007-11-20 Coman, R.M.,Robbins, A.H.,Fernandez, M.A.,Gilliland, C.T.,Sochet, A.A.,Goodenow, M.M.,McKenna, R.,Dunn, B.M. The Contribution of Naturally Occurring Polymorphisms in Altering the Biochemical and Structural Characteristics of HIV-1 Subtype C Protease Biochemistry 2008 47 731 743 2QVJ 18003727 Crystal structure of a vesicular stomatitis virus nucleocapsid protein Ser290Trp mutant 2007-08-08 2008-01-08 Zhang, X.,Green, T.J.,Tsao, J.,Qiu, S.,Luo, M. Role of intermolecular interactions of vesicular stomatitis virus nucleoprotein in RNA encapsidation. J.Virol. 2008 82 674 682 3BHX 18234225 X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a transition state analog of Asp-Glu 2007-11-29 2008-01-08 Barinka, C.,Hlouchova, K.,Rovenska, M.,Majer, P.,Dauter, M.,Hin, N.,Ko, Y.S.,Tsukamoto, T.,Slusher, B.S.,Konvalinka, J.,Lubkowski, J. Structural basis of interactions between human glutamate carboxypeptidase II and its substrate analogs J.Mol.Biol. 2008 376 1438 1450 3BI0 18234225 X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a transition state analog of Glu-Glu 2007-11-29 2008-01-08 Barinka, C.,Hlouchova, K.,Rovenska, M.,Majer, P.,Dauter, M.,Hin, N.,Ko, Y.S.,Tsukamoto, T.,Slusher, B.S.,Konvalinka, J.,Lubkowski, J. Structural basis of interactions between human glutamate carboxypeptidase II and its substrate analogs J.Mol.Biol. 2008 376 1438 1450 2QIQ 17855091 Structure-based Design and Synthesis and Biological Evaluation of Peptidomimetic SARS-3CLpro Inhibitors 2007-07-05 2008-02-12 Ghosh, A.K.,Xi, K.,Grum-Tokars, V.,Xu, X.,Ratia, K.,Fu, W.,Houser, K.V.,Baker, S.C.,Johnson, M.E.,Mesecar, A.D. Structure-based design, synthesis, and biological evaluation of peptidomimetic SARS-CoV 3CLpro inhibitors. Bioorg.Med.Chem.Lett. 2007 17 5876 5880 2P1C 18442135 T. Brucei Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-210 2007-03-04 2008-03-04 Cao, R.,Chen, C.K.,Guo, R.T.,Wang, A.H.,Oldfield, E. Structures of a potent phenylalkyl bisphosphonate inhibitor bound to farnesyl and geranylgeranyl diphosphate synthases. Proteins 2008 73 431 439 2ZEX 18025086 Family 16 carbohydrate binding module 2007-12-18 2008-03-04 Bae, B.,Ohene-Adjei, S.,Kocherginskaya, S.,Mackie, R.I.,Spies, M.A.,Cann, I.K.,Nair, S.K. Molecular Basis for the Selectivity and Specificity of Ligand Recognition by the Family 16 Carbohydrate-binding Modules from Thermoanaerobacterium polysaccharolyticum ManA J.Biol.Chem. 2008 283 12415 12425 2ZEZ 18025086 Family 16 Carbohydrate Binding Module-2 2007-12-18 2008-03-25 Bae, B.,Ohene-Adjei, S.,Kocherginskaya, S.,Mackie, R.I.,Spies, M.A.,Cann, I.K.,Nair, S.K. Molecular Basis for the Selectivity and Specificity of Ligand Recognition by the Family 16 Carbohydrate-binding Modules from Thermoanaerobacterium polysaccharolyticum ManA J.Biol.Chem. 2008 283 12415 12425 3BRN 18445596 Crystal Structure of AM182 Serotonin Complex 2007-12-21 2008-04-01 Mans, B.J.,Ribeiro, J.M.,Andersen, J.F. Structure, function, and evolution of biogenic amine-binding proteins in soft ticks. J.Biol.Chem. 2008 283 18721 18733 3BS2 18445596 Crystal Structure of Monomine 2007-12-21 2008-04-01 Mans, B.J.,Ribeiro, J.M.,Andersen, J.F. Structure, function, and evolution of biogenic amine-binding proteins in soft ticks. J.Biol.Chem. 2008 283 18721 18733 3BV7 18407998 Crystal structure of Delta(4)-3-ketosteroid 5-beta-reductase in complex with NADP and glycerol. Resolution: 1.79 A. 2008-01-04 2008-04-01 Di Costanzo, L.,Drury, J.E.,Penning, T.M.,Christianson, D.W. Crystal Structure of Human Liver {Delta}4-3-Ketosteroid 5{beta}-Reductase (AKR1D1) and Implications for Substrate Binding and Catalysis. J.Biol.Chem. 2008 283 16830 16839 2YVI Crystal structure of a death domain of human ankryn protein 2007-04-12 2008-04-15 Ihsanawati,Bessho, Y.,Chen, L.,Liu, Z.J.,Wang, B.C.,Shirouzu, M.,Yokoyama, S. Crystal structure of a death domain of human ankryn protein To be Published 0 0 0 0 3BA7 18308335 Crystal structure of L26N/D28A mutant of Human acidic fibroblast growth factor 2007-11-07 2008-04-15 Lee, J.,Dubey, V.K.,Longo, L.M.,Blaber, M. A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif. J.Mol.Biol. 2008 377 1251 1264 3BAH 18308335 Crystal structure of K112N mutant of Human acidic fibroblast growth factor 2007-11-07 2008-04-15 Lee, J.,Dubey, V.K.,Longo, L.M.,Blaber, M. A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif. J.Mol.Biol. 2008 377 1251 1264 3BAO 18308335 Crystal structure of L26N mutant of Human acidic fibroblast growth factor 2007-11-08 2008-04-15 Lee, J.,Dubey, V.K.,Longo, L.M.,Blaber, M. A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif. J.Mol.Biol. 2008 377 1251 1264 3BAU 18308335 Crystal structure of K12V/L26D/D28A mutant of Human acidic fibroblast growth factor 2007-11-08 2008-04-15 Lee, J.,Dubey, V.K.,Longo, L.M.,Blaber, M. A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif. J.Mol.Biol. 2008 377 1251 1264 3BB2 18308335 Crystal structure of L26D/D28N mutant of Human acidic fibroblast growth factor 2007-11-09 2008-04-15 Lee, J.,Dubey, V.K.,Longo, L.M.,Blaber, M. A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif. J.Mol.Biol. 2008 377 1251 1264 2QWX 18254726 Crystal Structure of Quinone Reductase II 2007-08-10 2008-04-29 Calamini, B.,Santarsiero, B.D.,Boutin, J.A.,Mesecar, A.D. Kinetic, thermodynamic and X-ray structural insights into the interaction of melatonin and analogues with quinone reductase 2. Biochem.J. 2008 413 81 91 3CRK 18387944 Crystal structure of the PDHK2-L2 complex. 2008-04-07 2008-04-29 Green, T.,Grigorian, A.,Klyuyeva, A.,Tuganova, A.,Luo, M.,Popov, K.M. Structural and functional insights into the molecular mechanisms responsible for the regulation of pyruvate dehydrogenase kinase 2. J.Biol.Chem. 2008 283 15789 15798 3CRM 17292915 Structure of tRNA Dimethylallyltransferase: RNA Modification through a Channel 2008-04-07 2008-04-29 Xie, W.,Zhou, C.,Huang, R.H. Structure of tRNA Dimethylallyltransferase: RNA Modification through a Channel J.Mol.Biol. 2007 367 872 881 3CRQ 17292915 Structure of tRNA Dimethylallyltransferase: RNA Modification through a Channel 2008-04-07 2008-04-29 Xie, W.,Zhou, C.,Huang, R.H. Structure of tRNA Dimethylallyltransferase: RNA Modification through a Channel J.Mol.Biol. 2007 367 872 881 3CRR 17292915 Structure of tRNA Dimethylallyltransferase: RNA Modification through a Channel 2008-04-07 2008-04-29 Xie, W.,Zhou, C.,Huang, R.H. Structure of tRNA Dimethylallyltransferase: RNA Modification through a Channel J.Mol.Biol. 2007 367 872 881 2YZ8 Crystal structure of the 32th Ig-like domain of human obscurin (KIAA1556) 2007-05-04 2008-05-06 Saijo, S.,Ohsawa, N.,Nishino, A.,Kishishita, S.,Chen, L.,Fu, Z.Q.,Chrzas, J.,Wang, B.C.,Shirouzu, M.,Yokoyama, S. Crystal structure of the 32th Ig-like domain of human obscurin (KIAA1556) To be Published 0 0 0 0 3CBM 18471979 SET7/9-ER-AdoMet complex 2008-02-22 2008-05-13 Subramanian, K.,Jia, D.,Kapoor-Vazirani, P.,Powell, D.R.,Collins, R.E.,Sharma, D.,Peng, J.,Cheng, X.,Vertino, P.M. Regulation of estrogen receptor alpha by the SET7 lysine methyltransferase. Mol.Cell 2008 30 336 347 3CBO 18471979 SET7/9-ER-AdoHcy complex 2008-02-22 2008-05-13 Subramanian, K.,Jia, D.,Kapoor-Vazirani, P.,Powell, D.R.,Collins, R.E.,Sharma, D.,Peng, J.,Cheng, X.,Vertino, P.M. Regulation of estrogen receptor alpha by the SET7 lysine methyltransferase. Mol.Cell 2008 30 336 347 3CBP 18471979 Set7/9-ER-Sinefungin complex 2008-02-22 2008-05-13 Subramanian, K.,Jia, D.,Kapoor-Vazirani, P.,Powell, D.R.,Collins, R.E.,Sharma, D.,Peng, J.,Cheng, X.,Vertino, P.M. Regulation of estrogen receptor alpha by the SET7 lysine methyltransferase. Mol.Cell 2008 30 336 347 2RD8 18370400 Human Thymidylate Synthase Stabilized in Active Conformation by R163K Mutation: Asymmetry and Reactivity of Cys195 2007-09-21 2008-05-27 Gibson, L.M.,Lovelace, L.L.,Lebioda, L. The R163K Mutant of Human Thymidylate Synthase Is Stabilized in an Active Conformation: Structural Asymmetry and Reactivity of Cysteine 195. Biochemistry 2008 47 4636 4643 3D9A 19781789 High Resolution Crystal Structure Structure of HyHel10 Fab Complexed to Hen Egg Lysozyme 2008-05-27 2008-06-10 Acchione, M.,Lipschultz, C.A.,DeSantis, M.E.,Shanmuganathan, A.,Li, M.,Wlodawer, A.,Tarasov, S.,Smith-Gill, S.J. Light chain somatic mutations change thermodynamics of binding and water coordination in the HyHEL-10 family of antibodies. Mol.Immunol. 2009 47 457 464 2QIO 18663709 X-Ray Structure of Enoyl-Acyl Carrier Protein Reductase from Bacillus Anthracis with Triclosan 2007-07-05 2008-07-08 Tipparaju, S.K.,Mulhearn, D.C.,Klein, G.M.,Chen, Y.,Tapadar, S.,Bishop, M.H.,Yang, S.,Chen, J.,Ghassemi, M.,Santarsiero, B.D.,Cook, J.L.,Johlfs, M.,Mesecar, A.D.,Johnson, M.E.,Kozikowski, A.P. Design and synthesis of aryl ether inhibitors of the Bacillus anthracis enoyl-ACP reductase. Chemmedchem 2008 3 1250 1268 2ZI7 18570408 C4S dCK variant of dCK in complex with D-dG+UDP 2008-02-13 2008-07-08 Sabini, E.,Hazra, S.,Konrad, M.,Lavie, A. Elucidation of different binding modes of purine nucleosides to human deoxycytidine kinase J.Med.Chem. 2008 51 4219 4225 2ZIA 18570408 C4S dCK variant of dCK in complex with cladribine+UDP 2008-02-13 2008-07-08 Sabini, E.,Hazra, S.,Konrad, M.,Lavie, A. Elucidation of different binding modes of purine nucleosides to human deoxycytidine kinase J.Med.Chem. 2008 51 4219 4225 2QTM 18977360 Crystal Structure of Nicotinate Mononucleotide Adenylyltransferase 2007-08-02 2008-07-15 Sershon, V.C.,Santarsiero, B.D.,Mesecar, A.D. Kinetic and X-ray structural evidence for negative cooperativity in substrate binding to nicotinate mononucleotide adenylyltransferase (NMAT) from Bacillus anthracis. J.Mol.Biol. 2009 385 867 888 3D89 18703841 Crystal Structure of a Soluble Rieske Ferredoxin from Mus musculus 2008-05-22 2008-07-15 Levin, E.J.,Elsen, N.L.,Seder, K.D.,McCoy, J.G.,Fox, B.G.,Phillips, G.N. X-ray structure of a soluble Rieske-type ferredoxin from Mus musculus. Acta Crystallogr.,Sect.D 2008 64 933 940 2R8N 18566511 Structural Analysis of the Unbound Form of HIV-1 Subtype C Protease 2007-09-11 2008-07-29 Coman, R.M.,Robbins, A.H.,Goodenow, M.M.,Dunn, B.M.,McKenna, R. High-resolution structure of unbound human immunodeficiency virus 1 subtype C protease: implications of flap dynamics and drug resistance. Acta Crystallogr.,Sect.D 2008 64 754 763 2QUF Crystal Structure of Transcription Factor AXXA-PF0095 from Pyrococcus furiosus 2007-08-05 2008-08-05 Yang, H.,Lipscomb, G.L.,Scott, R.A.,Rose, J.P.,Wang, B.C. Crystal Structure of Transcription Factor AXXA-PF0095 from Pyrococcus furiosus To be Published 0 0 0 0 2QX8 18254726 Crystal Structure of Quinone Reductase II 2007-08-10 2008-09-02 Calamini, B.,Santarsiero, B.D.,Boutin, J.A.,Mesecar, A.D. Kinetic, thermodynamic and X-ray structural insights into the interaction of melatonin and analogues with quinone reductase 2. Biochem.J. 2008 413 81 91 3CML 19172746 Crystal Structure of the DBL3x domain of the Plasmodium falcipurum VAR2CSA protein 2008-03-23 2008-09-02 Singh, K.,Gittis, A.G.,Nguyen, P.,Gowda, D.C.,Miller, L.H.,Garboczi, D.N. Structure of the DBL3x domain of pregnancy-associated malaria protein VAR2CSA complexed with chondroitin sulfate A. Nat.Struct.Mol.Biol. 2008 15 932 938 2QX4 18254726 Crystal Structure of Quinone Reductase II 2007-08-10 2008-09-09 Calamini, B.,Santarsiero, B.D.,Boutin, J.A.,Mesecar, A.D. Kinetic, thermodynamic and X-ray structural insights into the interaction of melatonin and analogues with quinone reductase 2. Biochem.J. 2008 413 81 91 2QX6 18254726 Crystal Structure of Quinone Reductase II 2007-08-10 2008-09-09 Calamini, B.,Santarsiero, B.D.,Boutin, J.A.,Mesecar, A.D. Kinetic, thermodynamic and X-ray structural insights into the interaction of melatonin and analogues with quinone reductase 2. Biochem.J. 2008 413 81 91 3DPY 18844669 Protein farnesyltransferase complexed with FPP and caged TKCVIM substrate 2008-07-09 2008-09-30 DeGraw, A.J.,Hast, M.A.,Xu, J.,Mullen, D.,Beese, L.S.,Barany, G.,Distefano, M.D. Caged protein prenyltransferase substrates: tools for understanding protein prenylation. Chem.Biol.Drug Des. 2008 72 171 181 3E57 Crystal structure of Tm1382, a putative Nudix hydrolase 2008-08-13 2008-09-30 Choi, W.,Cooper, D.R.,Derewenda, Z.S. Crystal structure of Tm1382, a putative Nudix hydrolase To be Published 0 0 0 0 3CBB 18829458 Crystal Structure of Hepatocyte Nuclear Factor 4alpha in complex with DNA: Diabetes Gene Product 2008-02-21 2008-10-07 Lu, P.,Rha, G.B.,Melikishvili, M.,Wu, G.,Adkins, B.C.,Fried, M.G.,Chi, Y.I. Structural basis of natural promoter recognition by a unique nuclear receptor, HNF4alpha. Diabetes gene product. J.Biol.Chem. 2008 283 33685 33697 3E9S A new class of papain-like protease/deubiquitinase inhibitors blocks SARS virus replication 2008-08-23 2008-10-07 Mesecar, A.D.,Ratia, K.,Pegan, S. A new class of papain-like protease/deubiquitinase inhibitors blocks SARS virus replication To be published 0 0 0 0 3CJZ 18772248 Effects of N2,N2-dimethylguanosine on RNA structure and stability: crystal structure of an RNA duplex with tandem m22G:A pairs 2008-03-14 2008-10-14 Pallan, P.S.,Kreutz, C.,Bosio, S.,Micura, R.,Egli, M. Effects of N2,N2-dimethylguanosine on RNA structure and stability: crystal structure of an RNA duplex with tandem m2 2G:A pairs. Rna 2008 14 2125 2135 2QL2 18069799 Crystal Structure of the basic-helix-loop-helix domains of the heterodimer E47/NeuroD1 bound to DNA 2007-07-12 2008-11-04 Longo, A.,Guanga, G.P.,Rose, R.B. Crystal structure of E47-NeuroD1/beta2 bHLH domain-DNA complex: heterodimer selectivity and DNA recognition. Biochemistry 2008 47 218 229 3D5O 19011614 Structural recognition and functional activation of FcrR by innate pentraxins 2008-05-16 2008-11-11 Lu, J.,Marnell, L.L.,Marjon, K.D.,Mold, C.,Du Clos, T.W.,Sun, P.D. Structural recognition and functional activation of FcgammaR by innate pentraxins. Nature 2008 456 989 992 3DF0 19020622 Calcium-dependent complex between m-calpain and calpastatin 2008-06-11 2008-11-11 Moldoveanu, T.,Gehring, K.,Green, D.R. Concerted multi-pronged attack by calpastatin to occlude the catalytic cleft of heterodimeric calpains. Nature 2008 456 404 408 3F0O 19004822 Crystal structure of MerB, the Organomercurial Lyase involved in a bacterial mercury resistance system 2008-10-25 2008-11-11 Lafrance-Vanasse, J.,Lefebvre, M.,Di Lello, P.,Sygusch, J.,Omichinski, J.G. Crystal Structures of the Organomercurial Lyase MerB in Its Free and Mercury-bound Forms: INSIGHTS INTO THE MECHANISM OF METHYLMERCURY DEGRADATION J.Biol.Chem. 2009 284 938 944 3F2F 19004822 Crystal structure of the mercury-bound form of MerB, the Organomercurial Lyase involved in a bacterial mercury resistance system 2008-10-29 2008-11-11 Lafrance-Vanasse, J.,Lefebvre, M.,Di Lello, P.,Sygusch, J.,Omichinski, J.G. Crystal Structures of the Organomercurial Lyase MerB in Its Free and Mercury-bound Forms: INSIGHTS INTO THE MECHANISM OF METHYLMERCURY DEGRADATION J.Biol.Chem. 2009 284 938 944 3EJ3 19018104 Structural and mechanistic analysis of trans-3-chloroacrylic acid dehalogenase activity 2008-09-17 2008-12-02 Pegan, S.D.,Serrano, H.,Whitman, C.P.,Mesecar, A.D. Structural and mechanistic analysis of trans-3-chloroacrylic acid dehalogenase activity. Acta Crystallogr.,Sect.D 2008 64 1277 1282 2ZNW 22769726 Crystal Structure of ScFv10 in Complex with Hen Egg Lysozyme 2008-05-02 2009-01-27 Acchione, M.,Lee, Y.C.,DeSantis, M.E.,Lipschultz, C.A.,Wlodawer, A.,Li, M.,Shanmuganathan, A.,Walter, R.L.,Smith-Gill, S.,Barchi, J.J. Specific fluorine labeling of the HyHEL10 antibody affects antigen binding and dynamics Biochemistry 2012 51 6017 6027 3BXM 19301871 Structure of an inactive mutant of human glutamate carboxypeptidase II [GCPII(E424A)] in complex with N-acetyl-Asp-Glu (NAAG) 2008-01-14 2009-01-27 Klusak, V.,Barinka, C.,Plechanovova, A.,Mlcochova, P.,Konvalinka, J.,Rulisek, L.,Lubkowski, J. Reaction mechanism of glutamate carboxypeptidase II revealed by mutagenesis, X-ray crystallography, and computational methods. Biochemistry 2009 48 4126 4138 3C38 Crystal structure of the periplasmic domain of Vibrio Cholerae LuxQ 2008-01-27 2009-01-27 Slama, B.,Hendrickson, W. Crystal structure of the periplasmic domain of Vibrio Cholerae LuxQ To be Published 0 0 0 0 3DR9 19153464 Increased Distal Histidine Conformational Flexibility in the Deoxy Form of Dehaloperoxidase from Amphitrite ornata 2008-07-10 2009-01-27 Chen, Z.,de Serrano, V.,Betts, L.,Franzen, S. Distal histidine conformational flexibility in dehaloperoxidase from Amphitrite ornata. Acta Crystallogr.,Sect.D 2009 65 34 40 3DZT 19234127 AeD7-leukotriene E4 complex 2008-07-30 2009-02-03 Calvo, E.,Mans, B.J.,Ribeiro, J.M.,Andersen, J.F. Multifunctionality and mechanism of ligand binding in a mosquito antiinflammatory protein Proc.Natl.Acad.Sci.USA 2009 106 3728 3733 3EKL 19167403 Structural Characterization of tetrameric Mycobacterium tuberculosis fructose 1,6-bisphosphate aldolase - substrate binding and catalysis mechanism of a class IIa bacterial aldolase 2008-09-19 2009-02-10 Pegan, S.D.,Rukseree, K.,Franzblau, S.G.,Mesecar, A.D. Structural basis for catalysis of a tetrameric class IIa fructose 1,6-bisphosphate aldolase from Mycobacterium tuberculosis J.Mol.Biol. 2009 386 1038 1053 3FLD 19136009 Crystal structure of the trai c-terminal domain 2008-12-18 2009-02-10 Guogas, L.M.,Kennedy, S.A.,Lee, J.H.,Redinbo, M.R. A novel fold in the TraI relaxase-helicase c-terminal domain is essential for conjugative DNA transfer. J.Mol.Biol. 2009 386 554 568 3FPD 19219047 G9a-like protein lysine methyltransferase inhibition by BIX-01294 2009-01-05 2009-02-17 Chang, Y.,Zhang, X.,Horton, J.R.,Upadhyay, A.K.,Spannhoff, A.,Liu, J.,Snyder, J.P.,Bedford, M.T.,Cheng, X. Structural basis for G9a-like protein lysine methyltransferase inhibition by BIX-01294. Nat.Struct.Mol.Biol. 2009 16 312 317 3C8E 21222452 Crystal Structure Analysis of yghU from E. Coli 2008-02-11 2009-02-24 Stourman, N.V.,Branch, M.C.,Schaab, M.R.,Harp, J.M.,Ladner, J.E.,Armstrong, R.N. Structure and Function of YghU, a Nu-Class Glutathione Transferase Related to YfcG from Escherichia coli. Biochemistry 2011 50 1274 1281 3E30 19246009 Protein farnesyltransferase complexed with FPP and ethylene diamine inhibitor 4 2008-08-06 2009-03-10 Hast, M.A.,Fletcher, S.,Cummings, C.G.,Pusateri, E.E.,Blaskovich, M.A.,Rivas, K.,Gelb, M.H.,Van Voorhis, W.C.,Sebti, S.M.,Hamilton, A.D.,Beese, L.S. Structural basis for binding and selectivity of antimalarial and anticancer ethylenediamine inhibitors to protein farnesyltransferase. Chem.Biol. 2009 16 181 192 3E32 19246009 Protein farnesyltransferase complexed with FPP and ethylenediamine scaffold inhibitor 2 2008-08-06 2009-03-10 Hast, M.A.,Fletcher, S.,Cummings, C.G.,Pusateri, E.E.,Blaskovich, M.A.,Rivas, K.,Gelb, M.H.,Van Voorhis, W.C.,Sebti, S.M.,Hamilton, A.D.,Beese, L.S. Structural basis for binding and selectivity of antimalarial and anticancer ethylenediamine inhibitors to protein farnesyltransferase. Chem.Biol. 2009 16 181 192 3E33 19246009 Protein farnesyltransferase complexed with FPP and ethylenediamine scaffold inhibitor 7 2008-08-06 2009-03-10 Hast, M.A.,Fletcher, S.,Cummings, C.G.,Pusateri, E.E.,Blaskovich, M.A.,Rivas, K.,Gelb, M.H.,Van Voorhis, W.C.,Sebti, S.M.,Hamilton, A.D.,Beese, L.S. Structural basis for binding and selectivity of antimalarial and anticancer ethylenediamine inhibitors to protein farnesyltransferase. Chem.Biol. 2009 16 181 192 3E34 19246009 Protein farnesyltransferase complexed with FPP and ethylenediamine-scaffold inhibitor 10 2008-08-06 2009-03-10 Hast, M.A.,Fletcher, S.,Cummings, C.G.,Pusateri, E.E.,Blaskovich, M.A.,Rivas, K.,Gelb, M.H.,Van Voorhis, W.C.,Sebti, S.M.,Hamilton, A.D.,Beese, L.S. Structural basis for binding and selectivity of antimalarial and anticancer ethylenediamine inhibitors to protein farnesyltransferase. Chem.Biol. 2009 16 181 192 3E37 19246009 Protein farnesyltransferase complexed with bisubstrate ethylenediamine scaffold inhibitor 5 2008-08-06 2009-03-10 Hast, M.A.,Fletcher, S.,Cummings, C.G.,Pusateri, E.E.,Blaskovich, M.A.,Rivas, K.,Gelb, M.H.,Van Voorhis, W.C.,Sebti, S.M.,Hamilton, A.D.,Beese, L.S. Structural basis for binding and selectivity of antimalarial and anticancer ethylenediamine inhibitors to protein farnesyltransferase. Chem.Biol. 2009 16 181 192 2ZKW Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group P21 2008-03-31 2009-03-24 Yoshikawa, S.,Kukimoto-Niino, M.,Ito, K.,Chen, L.,Fu, Z.Q.,Chrzas, J.,Wang, B.C.,Shirouzu, M.,Urushitani, M.,Takahashi, R.,Yokoyama, S. Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group P21 To be Published 0 0 0 0 2ZKX Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group I212121 2008-03-31 2009-03-24 Yoshikawa, S.,Kukimoto-Niino, M.,Ito, K.,Chen, L.,Fu, Z.Q.,Chrzas, J.,Wang, B.C.,Shirouzu, M.,Urushitani, M.,Takahashi, R.,Yokoyama, S. Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group I212121 To be Published 0 0 0 0 3FTC 19278652 Crystal structure of A. aeolicus KsgA at 1.72-Angstrom resolution 2009-01-12 2009-03-24 Tu, C.,Tropea, J.E.,Austin, B.P.,Court, D.L.,Waugh, D.S.,Ji, X. Structural Basis for Binding of RNA and Cofactor by a KsgA Methyltransferase. Structure 2009 17 374 385 3FTD 19278652 Crystal structure of A. aeolicus KsgA at 1.44-Angstrom resolution 2009-01-12 2009-03-24 Tu, C.,Tropea, J.E.,Austin, B.P.,Court, D.L.,Waugh, D.S.,Ji, X. Structural Basis for Binding of RNA and Cofactor by a KsgA Methyltransferase. Structure 2009 17 374 385 3FTF 19278652 Crystal structure of A. aeolicus KsgA in complex with RNA and SAH 2009-01-12 2009-03-24 Tu, C.,Tropea, J.E.,Austin, B.P.,Court, D.L.,Waugh, D.S.,Ji, X. Structural Basis for Binding of RNA and Cofactor by a KsgA Methyltransferase. Structure 2009 17 374 385 3GAM 19265439 Synthesis of Casimiroin and Optimization of Its Quinone Reductase 2 and Aromatase Inhibitory activity 2009-02-17 2009-03-24 Maiti, A.,Reddy, P.V.,Sturdy, M.,Marler, L.,Pegan, S.D.,Mesecar, A.D.,Pezzuto, J.M.,Cushman, M. Synthesis of casimiroin and optimization of its quinone reductase 2 and aromatase inhibitory activities. J.Med.Chem. 2009 52 1873 1884 3CQ2 Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (other form) from Thermus Thermophilus HB8 2008-04-02 2009-04-07 Jeyakanthan, J.,Kanaujia, S.P.,Sekar, K.,Satoh, S.,Kitamura, Y.,Ebihara, A.,Chen, L.,Liu, Z.J.,Wang, B.C.,Yokoyama, C.,Kuramitsu, S. Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein from Thermus Thermophilus HB8 To be Published 0 0 0 0 3FRP 19368894 Crystal Structure of Cobra Venom Factor, a Co-factor for C3- and C5 convertase CVFBb 2009-01-08 2009-04-28 Krishnan, V.,Ponnuraj, K.,Xu, Y.,Macon, K.,Volanakis, J.E.,Narayana, S.V. The Crystal Structure of Cobra Venom Factor, a Cofactor for C3- and C5-Convertase CVFBb. Structure 2009 17 611 619 3FF6 19390150 Human ACC2 CT domain with CP-640186 2008-12-02 2009-05-19 Madauss, K.P.,Burkhart, W.A.,Consler, T.G.,Cowan, D.J.,Gottschalk, W.K.,Miller, A.B.,Short, S.A.,Tran, T.B.,Williams, S.P. The human ACC2 CT-domain C-terminus is required for full functionality and has a novel twist. Acta Crystallogr.,Sect.D 2009 65 449 461 3GLB 19400783 Crystal structure of the effector binding domain of a CATM variant (R156H) 2009-03-11 2009-05-19 Craven, S.H.,Ezezika, O.C.,Haddad, S.,Hall, R.A.,Momany, C.,Neidle, E.L. Inducer responses of BenM, a LysR-type transcriptional regulator from Acinetobacter baylyi ADP1. Mol.Microbiol. 2009 72 881 894 3DGK Crystal structure of a glycine-rich loop mutant of the death associated protein kinase catalytic domain 2008-06-13 2009-05-26 McNamara, L.K.,Schavocky, J.P.,Watterson, D.M.,Brunzelle, J.S. High resolution crystal structures of the death associated protein kinase catalytic domain with a key point mutation in the glycine-rich loop To be Published 0 0 0 0 3H5R 19494832 Crystal structure of E. coli MccB + Succinimide 2009-04-22 2009-06-16 Regni, C.A.,Roush, R.F.,Miller, D.J.,Nourse, A.,Walsh, C.T.,Schulman, B.A. How the MccB bacterial ancestor of ubiquitin E1 initiates biosynthesis of the microcin C7 antibiotic. Embo J. 2009 28 1953 1964 3HP1 19159229 Crystal structure of human dCK R104M/D133A in complex with L-dT and ADP 2009-06-03 2009-06-16 Hazra, S.,Sabini, E.,Ort, S.,Konrad, M.,Lavie, A. Extending Thymidine Kinase Activity to the Catalytic Repertoire of Human Deoxycytidine Kinase. Biochemistry 2009 48 1256 1263 3H47 19523676 X-ray Structure of Hexameric HIV-1 CA 2009-04-18 2009-06-23 Pornillos, O.,Ganser-Pornillos, B.K.,Kelly, B.N.,Hua, Y.,Whitby, F.G.,Stout, C.D.,Sundquist, W.I.,Hill, C.P.,Yeager, M. X-ray structures of the hexameric building block of the HIV capsid. Cell(Cambridge,Mass.) 2009 137 1282 1292 3HJW 19478803 Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA 2009-05-22 2009-06-23 Liang, B.,Zhou, J.,Kahen, E.,Terns, R.M.,Terns, M.P.,Li, H. Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA Nat.Struct.Mol.Biol. 2009 16 740 746 3HJY 19478803 Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA 2009-05-22 2009-06-23 Liang, B.,Zhou, J.,Kahen, E.,Terns, R.M.,Terns, M.P.,Li, H. Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA Nat.Struct.Mol.Biol. 2009 16 740 746 3GTX 19631223 D71G/E101G mutant in organophosphorus hydrolase from Deinococcus radiodurans 2009-03-28 2009-06-30 Hawwa, R.,Larsen, S.D.,Ratia, K.,Mesecar, A.D. Structure-based and random mutagenesis approaches increase the organophosphate-degrading activity of a phosphotriesterase homologue from Deinococcus radiodurans. J.Mol.Biol. 2009 393 36 57 3GU2 19631223 Y97L/G100-/E101- mutant in organophosphorus hydrolase 2009-03-28 2009-06-30 Hawwa, R.,Larsen, S.D.,Ratia, K.,Mesecar, A.D. Structure-based and random mutagenesis approaches increase the organophosphate-degrading activity of a phosphotriesterase homologue from Deinococcus radiodurans. J.Mol.Biol. 2009 393 36 57 3GU9 19631223 R228A mutation in organophosphorus hydrolase from Deinococcus radiodurans 2009-03-28 2009-06-30 Hawwa, R.,Larsen, S.D.,Ratia, K.,Mesecar, A.D. Structure-based and random mutagenesis approaches increase the organophosphate-degrading activity of a phosphotriesterase homologue from Deinococcus radiodurans. J.Mol.Biol. 2009 393 36 57 3HTW 19631223 Organophosphorus hydrolase from Deinococcus radiodurans with cacodylate bound 2009-06-12 2009-06-30 Hawwa, R.,Larsen, S.D.,Ratia, K.,Mesecar, A.D. Structure-based and random mutagenesis approaches increase the organophosphate-degrading activity of a phosphotriesterase homologue from Deinococcus radiodurans. J.Mol.Biol. 2009 393 36 57 3GS3 19576221 Structure of the N-terminal HEAT Domain of Symplekin from D. melanogaster 2009-03-26 2009-07-14 Kennedy, S.A.,Frazier, M.L.,Steiniger, M.,Mast, A.M.,Marzluff, W.F.,Redinbo, M.R. Crystal structure of the HEAT domain from the Pre-mRNA processing factor Symplekin. J.Mol.Biol. 2009 392 115 128 3H3E Crystal structure of Tm1679, A METAL-DEPENDENT HYDROLASE OF THE BETA-LACTAMASE SUPERFAMILY 2009-04-16 2009-07-14 Cooper, D.R.,Olekhnovitch, N.,Derewenda, Z.S. Crystal structure of Tm1679, A METAL-DEPENDENT HYDROLASE OF THE BETA-LACTAMASE SUPERFAMILY To be Published 0 0 0 0 3FP3 19581297 Crystal structure of Tom71 2009-01-03 2009-07-28 Li, J.,Qian, X.,Hu, J.,Sha, B. Molecular chaperone Hsp70/Hsp90 prepares the mitochondrial outer membrane translocon receptor Tom71 for preprotein loading. J.Biol.Chem. 2009 284 23852 23859 3FP4 19581297 Crystal structure of Tom71 complexed with Ssa1 C-terminal fragment 2009-01-03 2009-07-28 Li, J.,Qian, X.,Hu, J.,Sha, B. Molecular chaperone Hsp70/Hsp90 prepares the mitochondrial outer membrane translocon receptor Tom71 for preprotein loading. J.Biol.Chem. 2009 284 23852 23859 3H2U 19523901 Human raver1 RRM1, RRM2, and RRM3 domains in complex with human vinculin tail domain Vt 2009-04-14 2009-07-28 Lee, J.H.,Rangarajan, E.S.,Yogesha, S.D.,Izard, T. Raver1 interactions with vinculin and RNA suggest a feed-forward pathway in directing mRNA to focal adhesions Structure 2009 17 833 842 3EHI 19569192 Crystal Structure of Human Thymidyalte Synthase M190K with Loop 181-197 stabilized in the inactive conformation 2008-09-12 2009-08-18 Lovelace, L.L.,Johnson, S.R.,Gibson, L.M.,Bell, B.J.,Berger, S.H.,Lebioda, L. Variants of human thymidylate synthase with loop 181-197 stabilized in the inactive conformation. Protein Sci. 2009 18 1628 1636 3F4D 19615330 Crystal structure of organophosphorus hydrolase from Geobacillus stearothermophilus strain 10 2008-10-31 2009-08-18 Hawwa, R.,Aikens, J.,Turner, R.J.,Santarsiero, B.D.,Mesecar, A.D. Structural basis for thermostability revealed through the identification and characterization of a highly thermostable phosphotriesterase-like lactonase from Geobacillus stearothermophilus. Arch.Biochem.Biophys. 2009 488 109 120 3I98 X-ray crystallographic structure of Inorganic Pyrophosphatase at 298K from archaeon Thermococcus thioreducens 2009-07-10 2009-08-18 Hughes, R.C.,Coates, L.,Meehan, E.J.,Ng, J.D. X-ray crystallographic structure of Inorganic Pyrophosphatase at 298K from archaeon Thermococcus thioreducens To be Published 0 0 0 0 3IF0 19578064 Crystal Structure of the Nanoarchaeum equitans tRNA splicing endonuclease structural subunit 2009-07-23 2009-08-18 Mitchell, M.,Xue, S.,Erdman, R.,Randau, L.,Soll, D.,Li, H. Crystal structure and assembly of the functional Nanoarchaeum equitans tRNA splicing endonuclease. Nucleic Acids Res. 2009 37 5793 5802 3FEC 19678840 Crystal structure of human Glutamate Carboxypeptidase III (GCPIII/NAALADase II), pseudo-unliganded 2008-11-28 2009-08-25 Hlouchova, K.,Barinka, C.,Konvalinka, J.,Lubkowski, J. Structural insight into the evolutionary and pharmacologic homology of glutamate carboxypeptidases II and III Febs J. 2009 276 4448 4462 3IEV 19706445 Crystal Structure of ERA in Complex with MgGNP and the 3' End of 16S rRNA 2009-07-23 2009-08-25 Tu, C.,Zhou, X.,Tropea, J.E.,Austin, B.P.,Waugh, D.S.,Court, D.L.,Ji, X. Structure of ERA in complex with the 3' end of 16S rRNA: implications for ribosome biogenesis Proc.Natl.Acad.Sci.USA 2009 106 14843 14848 3F4C 19615330 Crystal structure of organophosphorus hydrolase from Geobacillus stearothermophilus strain 10, with glycerol bound 2008-10-31 2009-09-15 Hawwa, R.,Aikens, J.,Turner, R.J.,Santarsiero, B.D.,Mesecar, A.D. Structural basis for thermostability revealed through the identification and characterization of a highly thermostable phosphotriesterase-like lactonase from Geobacillus stearothermophilus. Arch.Biochem.Biophys. 2009 488 109 120 3FJI 19683004 Crystal structure of K12V/C83I/C117V mutant of Human acidic fibroblast growth factor 2008-12-14 2009-10-06 Lee, J.,Blaber, M. Structural basis of conserved cysteine in the fibroblast growth factor family: evidence for a vestigial half-cystine. J.Mol.Biol. 2009 393 128 139 3HQH 19818708 Structures of SPOP-Substrate Complexes: Insights into Molecular Architectures of BTB-Cul3 Ubiquitin Ligases: SPOPMATHx-MacroH2ASBCpep1 2009-06-06 2009-10-20 Zhuang, M.,Calabrese, M.F.,Liu, J.,Waddell, M.B.,Nourse, A.,Hammel, M.,Miller, D.J.,Walden, H.,Duda, D.M.,Seyedin, S.N.,Hoggard, T.,Harper, J.W.,White, K.P.,Schulman, B.A. Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol.Cell 2009 36 39 50 3HQL 19818708 Structures of SPOP-Substrate Complexes: Insights into Molecular Architectures of BTB-Cul3 Ubiquitin Ligases:SPOPMATHx-PucSBC1_pep2 2009-06-07 2009-10-20 Zhuang, M.,Calabrese, M.F.,Liu, J.,Waddell, M.B.,Nourse, A.,Hammel, M.,Miller, D.J.,Walden, H.,Duda, D.M.,Seyedin, S.N.,Hoggard, T.,Harper, J.W.,White, K.P.,Schulman, B.A. Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol.Cell 2009 36 39 50 3HSV 19818708 Structures of SPOP-Substrate Complexes: Insights into Molecular Architectures of BTB-Cul3 Ubiquitin Ligases: SPOPMATHx-MacroH2ASBCpep2 2009-06-10 2009-10-20 Zhuang, M.,Calabrese, M.F.,Liu, J.,Waddell, M.B.,Nourse, A.,Hammel, M.,Miller, D.J.,Walden, H.,Duda, D.M.,Seyedin, S.N.,Hoggard, T.,Harper, J.W.,White, K.P.,Schulman, B.A. Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol.Cell 2009 36 39 50 3EYZ 20152155 Cocrystal structure of Bacillus fragment DNA polymerase I with duplex DNA (open form) 2008-10-22 2009-11-10 Golosov, A.A.,Warren, J.J.,Beese, L.S.,Karplus, M. The Mechanism of the Translocation Step in DNA Replication by DNA Polymerase I: A Computer Simulation Analysis. Structure 2010 18 83 93 3II5 19864136 The Complex of wild-type B-RAF with Pyrazolo pyrimidine inhibitor 2009-07-31 2009-11-10 Berger, D.M.,Torres, N.,Dutia, M.,Powell, D.,Ciszewski, G.,Gopalsamy, A.,Levin, J.I.,Kim, K.H.,Xu, W.,Wilhelm, J.,Hu, Y.,Collins, K.,Feldberg, L.,Kim, S.,Frommer, E.,Wojciechowicz, D.,Mallon, R. Non-hinge-binding pyrazolo[1,5-a]pyrimidines as potent B-Raf kinase inhibitors. Bioorg.Med.Chem.Lett. 2009 19 6519 6523 3KSW 20530488 Crystal structure of sterol 14alpha-demethylase (CYP51) from Trypanosoma cruzi in complex with an inhibitor VNF ((4-(4-chlorophenyl)-N-[2-(1H-imidazol-1-yl)-1-phenylethyl]benzamide) 2009-11-23 2009-12-01 Lepesheva, G.I.,Hargrove, T.Y.,Anderson, S.,Kleshchenko, Y.,Furtak, V.,Wawrzak, Z.,Villalta, F.,Waterman, M.R. Structural Insights into Inhibition of Sterol 14{alpha}-Demethylase in the Human Pathogen Trypanosoma cruzi. J.Biol.Chem. 2010 285 25582 25590 3HAL 19923726 Crystal structure of Rabbit acidic fibroblast growth factor 2009-05-01 2009-12-22 Lee, J.,Blaber, S.I.,Irsigler, A.,Aspinwall, E.,Blaber, M. X-ray structure and biophysical properties of rabbit fibroblast growth factor 1. Acta Crystallogr.,Sect.F 2009 65 1097 1104 3JXA 20133774 Immunoglobulin domains 1-4 of mouse CNTN4 2009-09-18 2009-12-22 Bouyain, S.,Watkins, D.J. The protein tyrosine phosphatases PTPRZ and PTPRG bind to distinct members of the contactin family of neural recognition molecules. Proc.Natl.Acad.Sci.USA 2010 107 2443 2448 3KF4 19895503 Structural analysis of DFG-in and DFG-out dual Src-Abl inhibitors sharing a common vinyl purine template 2009-10-27 2009-12-22 Zhou, T.,Commodore, L.,Huang, W.S.,Wang, Y.,Sawyer, T.K.,Shakespeare, W.C.,Clackson, T.,Zhu, X.,Dalgarno, D.C. Structural analysis of DFG-in and DFG-out dual Src-Abl inhibitors sharing a common vinyl purine template. Chem.Biol.Drug Des. 2010 75 18 28 3KFA 19895503 Structural analysis of DFG-in and DFG-out dual Src-Abl inhibitors sharing a common vinyl purine template 2009-10-27 2009-12-22 Zhou, T.,Commodore, L.,Huang, W.S.,Wang, Y.,Sawyer, T.K.,Shakespeare, W.C.,Clackson, T.,Zhu, X.,Dalgarno, D.C. Structural analysis of DFG-in and DFG-out dual Src-Abl inhibitors sharing a common vinyl purine template. Chem.Biol.Drug Des. 2010 75 18 28 3KLD 20133774 PTPRG CNTN4 complex 2009-11-07 2009-12-22 Bouyain, S.,Watkins, D.J. The protein tyrosine phosphatases PTPRZ and PTPRG bind to distinct members of the contactin family of neural recognition molecules. Proc.Natl.Acad.Sci.USA 2010 107 2443 2448 3KVB 20023638 Structure of KIAA1718 Jumonji domain in complex with N-oxalylglycine 2009-11-29 2009-12-22 Horton, J.R.,Upadhyay, A.K.,Qi, H.H.,Zhang, X.,Shi, Y.,Cheng, X. Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases. Nat.Struct.Mol.Biol. 2010 17 38 43 3FMX Crystal structure of Tartrate dehydrogenase from Pseudomonas putida complexed with NADH 2008-12-22 2010-01-12 Malik, R.,Viola, R.E. Structural Characterization of Tartrate Dehydrogenase: a versatile enzyme catalyzing multiple reactions To be Published 0 0 0 0 3JXC 20053356 Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9T in the presence of Tl+ 2009-09-18 2010-01-19 Watkins, D.,Mohan, S.,Koudelka, G.B.,Williams, L.D. Sequence Recognition of DNA by Protein-Induced Conformational Transitions. J.Mol.Biol. 2010 396 1145 1164 3JXD 20053356 Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C in the presence of Rb+ 2009-09-18 2010-01-19 Watkins, D.,Mohan, S.,Koudelka, G.B.,Williams, L.D. Sequence Recognition of DNA by Protein-Induced Conformational Transitions. J.Mol.Biol. 2010 396 1145 1164 3HX6 20080557 Crystal structure of Pseudomonas aeruginosa PilY1 C-terminal domain 2009-06-19 2010-01-26 Orans, J.,Johnson, M.D.,Coggan, K.A.,Sperlazza, J.R.,Heiniger, R.W.,Wolfgang, M.C.,Redinbo, M.R. Crystal structure analysis reveals Pseudomonas PilY1 as an essential calcium-dependent regulator of bacterial surface motility. Proc.Natl.Acad.Sci.USA 2010 107 1065 1070 3IM3 20159461 Crystal structure of PKA RI alpha dimerization/docking domain 2009-08-09 2010-02-02 Sarma, G.N.,Kinderman, F.S.,Kim, C.,von Daake, S.,Chen, L.,Wang, B.C.,Taylor, S.S. Structure of D-AKAP2:PKA RI Complex: Insights into AKAP Specificity and Selectivity Structure 2010 18 155 166 3LGE 20129922 Crystal structure of rabbit muscle aldolase-SNX9 LC4 complex 2010-01-20 2010-02-02 Rangarajan, E.S.,Park, H.,Fortin, E.,Sygusch, J.,Izard, T. Mechanism of aldolase control of sorting nexin 9 function in endocytosis. J.Biol.Chem. 2010 285 11983 11990 3EAW 20151707 Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability 2008-08-26 2010-03-02 Huang, X.,Gibson, L.M.,Bell, B.J.,Lovelace, L.L.,Pena, M.M.,Berger, F.G.,Berger, S.H.,Lebioda, L. Replacement of Val3 in human thymidylate synthase affects its kinetic properties and intracellular stability . Biochemistry 2010 49 2475 2482 3L2E 20121101 Glycocyamine kinase, alpha-beta heterodimer from marine worm Namalycastis sp. 2009-12-15 2010-03-02 Lim, K.,Pullalarevu, S.,Surabian, K.T.,Howard, A.,Suzuki, T.,Moult, J.,Herzberg, O. Structural basis for the mechanism and substrate specificity of glycocyamine kinase, a phosphagen kinase family member. Biochemistry 2010 49 2031 2041 3GU8 Crystal structure of DAPKL93G with N6-cyclopentyladenosine 2009-03-28 2010-03-09 McNamara, L.K.,Schavocky, J.S.,Watterson, D.M.,Brunzelle, J.S. Crystal structures of the DAPK gatekeeper mutant with N6-modified adenosine analogs. To be Published 0 0 0 0 3GUB Crystal structure of DAPKL93G complexed with N6-(2-Phenylethyl)adenosine 2009-03-29 2010-03-09 McNamara, L.K.,Schavocky, J.S.,Watterson, D.M.,Brunzelle, J.S. Crystal structures of the DAPK gatekeeper mutant complexed with N6-modified adenosine analogs. To be Published 0 0 0 0 3GIX Crystal structure of human splicing factor dim2 2009-03-06 2010-03-16 Jin, T.C.,Guo, F.,Wang, Y.T.,Howard, A.,Zhang, Y.Z. Crystal structure of human splicing factor dim2 To be Published 0 0 0 0 3LW6 20236943 Crystal Structure of Drosophila beta1,4-galactosyltransferase-7 2010-02-23 2010-03-16 Ramakrishnan, B.,Qasba, P.K. Crystal structure of the catalytic domain of Drosophila beta1,4-Galactosyltransferase-7. J.Biol.Chem. 2010 285 15619 15626 3GO6 Crystal Structure of M. tuberculosis ribokinase (Rv2436) in complex with ribose and AMP-PNP 2009-03-18 2010-03-31 Masters, E.I.,Sun, Y.,Wang, Y.,Parker, W.B.,Li, R. Crystal structure and biochemical characterization of M.tuberculosis ribokinase (Rv2436) To be Published 0 0 0 0 3GO7 Crystal Structure of M. tuberculosis ribokinase (Rv2436) in complex with ribose 2009-03-18 2010-03-31 Masters, E.I.,Sun, Y.,Wang, Y.,Parker, W.B.,Li, R. Crystal structure and biochemical characterization of M.tuberculosis ribokinase (Rv2436) To be Published 0 0 0 0 3M6S 20352039 Crystal structure of H1N1pdm Hemagglutinin 2010-03-16 2010-03-31 Yang, H.,Carney, P.,Stevens, J. Structure and Receptor binding properties of a pandemic H1N1 virus hemagglutinin PLoS Curr 2010 0 0 0 3HBG 20356030 Structure of recombinant Chicken Liver Sulfite Oxidase mutant C185S 2009-05-04 2010-04-14 Qiu, J.A.,Wilson, H.L.,Pushie, M.J.,Kisker, C.,George, G.N.,Rajagopalan, K.V. The structures of the C185S and C185A mutants of sulfite oxidase reveal rearrangement of the active site. Biochemistry 2010 49 3989 4000 3HBG 20356030 Structure of recombinant Chicken Liver Sulfite Oxidase mutant C185S 2009-05-04 2010-04-14 Qiu, J.A.,Wilson, H.L.,Pushie, M.J.,Kisker, C.,George, G.N.,Rajagopalan, K.V. The structures of the C185S and C185A mutants of sulfite oxidase reveal rearrangement of the active site. Biochemistry 2010 49 3989 4000 3HBG 20356030 Structure of recombinant Chicken Liver Sulfite Oxidase mutant C185S 2009-05-04 2010-04-14 Qiu, J.A.,Wilson, H.L.,Pushie, M.J.,Kisker, C.,George, G.N.,Rajagopalan, K.V. The structures of the C185S and C185A mutants of sulfite oxidase reveal rearrangement of the active site. Biochemistry 2010 49 3989 4000 3HBP 20356030 The crystal structure of C185S mutant of recombinant sulfite oxidase with bound substrate, sulfite, at the active site 2009-05-04 2010-04-14 Qiu, J.A.,Wilson, H.L.,Pushie, M.J.,Kisker, C.,George, G.N.,Rajagopalan, K.V. The structures of the C185S and C185A mutants of sulfite oxidase reveal rearrangement of the active site. Biochemistry 2010 49 3989 4000 3HBP 20356030 The crystal structure of C185S mutant of recombinant sulfite oxidase with bound substrate, sulfite, at the active site 2009-05-04 2010-04-14 Qiu, J.A.,Wilson, H.L.,Pushie, M.J.,Kisker, C.,George, G.N.,Rajagopalan, K.V. The structures of the C185S and C185A mutants of sulfite oxidase reveal rearrangement of the active site. Biochemistry 2010 49 3989 4000 3HBP 20356030 The crystal structure of C185S mutant of recombinant sulfite oxidase with bound substrate, sulfite, at the active site 2009-05-04 2010-04-14 Qiu, J.A.,Wilson, H.L.,Pushie, M.J.,Kisker, C.,George, G.N.,Rajagopalan, K.V. The structures of the C185S and C185A mutants of sulfite oxidase reveal rearrangement of the active site. Biochemistry 2010 49 3989 4000 3HBQ 20356030 Structure of recombinant Chicken Liver Sulfite Oxidase mutant Cys 185 Ala 2009-05-04 2010-04-14 Qiu, J.A.,Wilson, H.L.,Pushie, M.J.,Kisker, C.,George, G.N.,Rajagopalan, K.V. The structures of the C185S and C185A mutants of sulfite oxidase reveal rearrangement of the active site. Biochemistry 2010 49 3989 4000 3HDK 22158985 Crystal structure of chemically synthesized [Aib51/51']HIV-1 protease 2009-05-07 2010-04-28 Torbeev, V.Y.,Raghuraman, H.,Hamelberg, D.,Tonelli, M.,Westler, W.M.,Perozo, E.,Kent, S.B. Protein conformational dynamics in the mechanism of HIV-1 protease catalysis. Proc.Natl.Acad.Sci.USA 2011 108 20982 20987 3KYU 20445231 X-ray crystal structure determination of fully perdeuterated rubredoxin at 100K 2009-12-07 2010-04-28 Gardberg, A.S.,Del Castillo, A.R.,Weiss, K.L.,Meilleur, F.,Blakeley, M.P.,Myles, D.A. Unambiguous determination of H-atom positions: comparing results from neutron and high-resolution X-ray crystallography. Acta Crystallogr.,Sect.D 2010 66 558 567 3KYV 20445231 Denovo X-ray crystal structure determination of H-labeled perdeuterated rubredoxin at 100K 2009-12-07 2010-04-28 Gardberg, A.S.,Del Castillo, A.R.,Weiss, K.L.,Meilleur, F.,Blakeley, M.P.,Myles, D.A. Unambiguous determination of H-atom positions: comparing results from neutron and high-resolution X-ray crystallography. Acta Crystallogr.,Sect.D 2010 66 558 567 3KYW 20445231 Xray crystal structure determination of H-labeled perdeuterated rubredoxin at 295K 2009-12-07 2010-04-28 Gardberg, A.S.,Del Castillo, A.R.,Weiss, K.L.,Meilleur, F.,Blakeley, M.P.,Myles, D.A. Unambiguous determination of H-atom positions: comparing results from neutron and high-resolution X-ray crystallography. Acta Crystallogr.,Sect.D 2010 66 558 567 3KYY 20445231 Joint Xray/neutron crystal structure determination of H-labeled perdeuterated rubredoxin at 295K 2009-12-07 2010-04-28 Gardberg, A.S.,Del Castillo, A.R.,Weiss, K.L.,Meilleur, F.,Blakeley, M.P.,Myles, D.A. Unambiguous determination of H-atom positions: comparing results from neutron and high-resolution X-ray crystallography. Acta Crystallogr.,Sect.D 2010 66 558 567 3KYY 20445231 Joint Xray/neutron crystal structure determination of H-labeled perdeuterated rubredoxin at 295K 2009-12-07 2010-04-28 Gardberg, A.S.,Del Castillo, A.R.,Weiss, K.L.,Meilleur, F.,Blakeley, M.P.,Myles, D.A. Unambiguous determination of H-atom positions: comparing results from neutron and high-resolution X-ray crystallography. Acta Crystallogr.,Sect.D 2010 66 558 567 3HB8 21206062 Structures of Thymidylate Synthase R163K with Substrates and Inhibitors Show Subunit Asymmetry 2009-05-04 2010-05-26 Gibson, L.M.,Celeste, L.R.,Lovelace, L.L.,Lebioda, L. Structures of human thymidylate synthase R163K with dUMP, FdUMP and glutathione show asymmetric ligand binding. Acta Crystallogr.,Sect.D 2011 67 60 66 3MB2 20465238 Kinetic and Structural Characterization of a Heterohexamer 4-Oxalocrotonate Tautomerase from Chloroflexus aurantiacus J-10-fl: Implications for Functional and Structural Diversity in the Tautomerase Superfamily 2010-03-24 2010-06-02 Burks, E.A.,Fleming, C.D.,Mesecar, A.D.,Whitman, C.P.,Pegan, S.D. Kinetic and structural characterization of a heterohexamer 4-oxalocrotonate tautomerase from Chloroflexus aurantiacus J-10-fl: implications for functional and structural diversity in the tautomerase superfamily Biochemistry 2010 49 5016 5027 3LRS 20538861 Structure of PG16, an antibody with broad and potent neutralization of HIV-1 2010-02-11 2010-06-09 Pancera, M.,McLellan, J.S.,Wu, X.,Zhu, J.,Changela, A.,Schmidt, S.D.,Yang, Y.,Zhou, T.,Phogat, S.,Mascola, J.R.,Kwong, P.D. Crystal structure of PG16 and chimeric dissection with somatically related PG9: structure-function analysis of two quaternary-specific antibodies that effectively neutralize HIV-1. J.Virol. 2010 84 8098 8110 3HC2 Crystal Structure of chicken sulfite oxidase mutant Tyr 322 Phe 2009-05-05 2010-06-16 Qiu, J.A.,Rajagopalan, K.V. Structure function studies in sulfite oxidase with altered active sites To be Published 0 0 0 0 3LYE 20558740 Crystal structure of oxaloacetate acetylhydrolase 2010-02-26 2010-06-16 Chen, C.,Sun, Q.,Narayanan, B.,Nuss, D.L.,Herzberg, O. Structure of oxalacetate acetylhydrolase, a virulence factor of the chestnut blight fungus. J.Biol.Chem. 2010 285 26685 26696 3HPO 21454515 Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus Y714S mutant bound to G:T mismatch 2009-06-04 2010-06-23 Wu, E.Y.,Beese, L.S. The structure of a high fidelity DNA polymerase bound to a mismatched nucleotide reveals an ""ajar"" intermediate conformation in the nucleotide selection mechanism. J.Biol.Chem. 2011 286 19758 19767 3MTR 20573953 Crystal structure of the Ig5-FN1 tandem of human NCAM 2010-04-30 2010-06-23 Foley, D.A.,Swartzentruber, K.G.,Lavie, A.,Colley, K.J. Structure and mutagenesis of neural cell adhesion molecule domains: evidence for flexibility in the placement of polysialic acid attachment sites J.Biol.Chem. 2010 285 27360 27371 3JQK 20606263 Crystal structure of the molybdenum cofactor biosynthesis protein C (TTHA1789) from Thermus Theromophilus HB8 (H32 FORM) 2009-09-07 2010-06-30 Kanaujia, S.P.,Jeyakanthan, J.,Nakagawa, N.,Balasubramaniam, S.,Shinkai, A.,Kuramitsu, S.,Yokoyama, S.,Sekar, K. Structures of apo and GTP-bound molybdenum cofactor biosynthesis protein MoaC from Thermus thermophilus HB8 Acta Crystallogr.,Sect.D 2010 66 821 833 3KUN 20606257 X-ray structure of the metcyano form of dehaloperoxidase from amphitrite ornata: evidence for photoreductive lysis of iron-cyanide bond 2009-11-27 2010-06-30 de Serrano, V.S.,Davis, M.F.,Gaff, J.F.,Zhang, Q.,Chen, Z.,D'Antonio, E.L.,Bowden, E.F.,Rose, R.,Franzen, S. X-ray structure of the metcyano form of dehaloperoxidase from Amphitrite ornata: evidence for photoreductive dissociation of the iron-cyanide bond. Acta Crystallogr.,Sect.D 2010 66 770 782 3KUO 20606257 X-ray structure of the metcyano form of dehaloperoxidase from amphitrite ornata: evidence for photoreductive lysis of iron-cyanide bond 2009-11-27 2010-06-30 de Serrano, V.S.,Davis, M.F.,Gaff, J.F.,Zhang, Q.,Chen, Z.,D'Antonio, E.L.,Bowden, E.F.,Rose, R.,Franzen, S. X-ray structure of the metcyano form of dehaloperoxidase from Amphitrite ornata: evidence for photoreductive dissociation of the iron-cyanide bond. Acta Crystallogr.,Sect.D 2010 66 770 782 3L54 24900173 Structure of Pi3K gamma with inhibitor 2009-12-21 2010-06-30 Knight, S.D.,Adams, N.D.,Burgess, J.L.,Chaudhari, A.M.,Darcy, M.G.,Donatelli, C.A.,Luengo, J.I.,Newlander, K.A.,Parrish, C.A.,Ridgers, L.H.,Sarpong, M.A.,Schmidt, S.J.,Van Aller, G.S.,Carson, J.D.,Diamond, M.A.,Elkins, P.A.,Gardiner, C.M.,Garver, E.,Gilbert, S.A.,Gontarek, R.R.,Jackson, J.R.,Kershner, K.L.,Luo, L.,Raha, K.,Sherk, C.S.,Sung, C.M.,Sutton, D.,Tummino, P.J.,Wegrzyn, R.J.,Auger, K.R.,Dhanak, D. Discovery of GSK2126458, a Highly Potent Inhibitor of PI3K and the Mammalian Target of Rapamycin. ACS Med Chem Lett 2010 1 39 43 3MJ5 20527968 Severe Acute Respiratory Syndrome-Coronavirus Papain-Like Protease Inhibitors: Design, Synthesis, Protein-Ligand X-ray Structure and Biological Evaluation 2010-04-12 2010-06-30 Ghosh, A.K.,Takayama, J.,Rao, K.V.,Ratia, K.,Chaudhuri, R.,Mulhearn, D.C.,Lee, H.,Nichols, D.B.,Baliji, S.,Baker, S.C.,Johnson, M.E.,Mesecar, A.D. Severe acute respiratory syndrome coronavirus papain-like novel protease inhibitors: design, synthesis, protein-ligand X-ray structure and biological evaluation J.Med.Chem. 2010 53 4968 4979 3MR2 20577208 Human DNA polymerase eta in complex with normal DNA and incoming nucleotide (Nrm) 2010-04-28 2010-06-30 Biertumpfel, C.,Zhao, Y.,Kondo, Y.,Ramon-Maiques, S.,Gregory, M.,Lee, J.Y.,Masutani, C.,Lehmann, A.R.,Hanaoka, F.,Yang, W. Structure and mechanism of human DNA polymerase eta. Nature 2010 465 1044 1048 3MR5 20577208 Human DNA polymerase eta - DNA ternary complex with a CPD 1bp upstream of the active site (TT3) 2010-04-28 2010-06-30 Biertumpfel, C.,Zhao, Y.,Kondo, Y.,Ramon-Maiques, S.,Gregory, M.,Lee, J.Y.,Masutani, C.,Lehmann, A.R.,Hanaoka, F.,Yang, W. Structure and mechanism of human DNA polymerase eta. Nature 2010 465 1044 1048 3MR6 20577208 Human DNA polymerase eta - DNA ternary complex with a CPD 2bp upstream of the active site (TT4) 2010-04-28 2010-06-30 Biertumpfel, C.,Zhao, Y.,Kondo, Y.,Ramon-Maiques, S.,Gregory, M.,Lee, J.Y.,Masutani, C.,Lehmann, A.R.,Hanaoka, F.,Yang, W. Structure and mechanism of human DNA polymerase eta. Nature 2010 465 1044 1048 3HT3 21454515 Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus V713P mutant bound to G:dCTP 2009-06-11 2010-07-14 Wu, E.Y.,Beese, L.S. The structure of a high fidelity DNA polymerase bound to a mismatched nucleotide reveals an ""ajar"" intermediate conformation in the nucleotide selection mechanism. J.Biol.Chem. 2011 286 19758 19767 3MWZ 20545851 Crystal structure of the selenomethionine derivative of the L 22,47,100 M mutant of sialostatin L2 2010-05-06 2010-07-14 Kotsyfakis, M.,Horka, H.,Salat, J.,Andersen, J.F. The crystal structures of two salivary cystatins from the tick Ixodes scapularis and the effect of these inhibitors on the establishment of Borrelia burgdorferi infection in a murine model. Mol.Microbiol. 2010 77 456 470 3I86 Crystal structure of the P60 Domain from M. avium subspecies paratuberculosis antigen MAP1204 2009-07-09 2010-07-21 Ramyar, K.X.,Lingle, C.K.,McWhorter, W.J.,Bouyain, S.,Bannantine, J.P.,Geisbrecht, B.V. Atypical structural features of two P60 family members from Mycobacterium avium subspecies paratuberculosis To be Published 0 0 0 0 3L3O 20654625 Staphylococcal Complement Inhibitor (SCIN) in complex with Human Complement Component C3c 2009-12-17 2010-08-04 Garcia, B.L.,Ramyar, K.X.,Tzekou, A.,Ricklin, D.,McWhorter, W.J.,Lambris, J.D.,Geisbrecht, B.V. Molecular Basis for Complement Recognition and Inhibition Determined by Crystallographic Studies of the Staphylococcal Complement Inhibitor (SCIN) Bound to C3c and C3b. J.Mol.Biol. 2010 402 17 29 3LSJ 20639888 Crystal structure of DesT in complex with palmitoyl-CoA 2010-02-12 2010-08-04 Miller, D.J.,Zhang, Y.M.,Subramanian, C.,Rock, C.O.,White, S.W. Structural basis for the transcriptional regulation of membrane lipid homeostasis. Nat.Struct.Mol.Biol. 2010 17 971 975 3LSP 20639888 Crystal Structure of DesT bound to desCB promoter and oleoyl-CoA 2010-02-12 2010-08-04 Miller, D.J.,Zhang, Y.M.,Subramanian, C.,Rock, C.O.,White, S.W. Structural basis for the transcriptional regulation of membrane lipid homeostasis. Nat.Struct.Mol.Biol. 2010 17 971 975 3LSR 20639888 Crystal structure of DesT in complex with duplex DNA 2010-02-12 2010-08-04 Miller, D.J.,Zhang, Y.M.,Subramanian, C.,Rock, C.O.,White, S.W. Structural basis for the transcriptional regulation of membrane lipid homeostasis. Nat.Struct.Mol.Biol. 2010 17 971 975 3N77 Crystal structure of Idp01880, putative NTP pyrophosphohydrolase of Salmonella typhimurium LT2 2010-05-26 2010-08-18 Frydrysiak, J.,Cooper, D.R.,Derewenda, U.,Derewenda, Z.S. Crystal structure of Idp01880, putative NTP pyrophosphohydrolase of Salmonella typhimurium LT2 To be Published 0 0 0 0 3KS2 20633281 Crystal Structure of Type-III Secretion Chaperone IpgC from Shigella flexneri (residues 10-155) 2009-11-20 2010-08-25 Barta, M.L.,Zhang, L.,Picking, W.L.,Geisbrecht, B.V. Evidence for alternative quaternary structure in a bacterial Type III secretion system chaperone Bmc Struct.Biol. 2010 10 21 21 3OHX 20654625 Molecular Basis for Complement Recognition and Inhibition Determined by Crystallographic Studies of the Staphylococcal Complement Inhibitor (SCIN) Bound to C3c and C3b 2010-08-18 2010-09-01 Garcia, B.L.,Ramyar, K.X.,Tzekou, A.,Ricklin, D.,McWhorter, W.J.,Lambris, J.D.,Geisbrecht, B.V. Molecular Basis for Complement Recognition and Inhibition Determined by Crystallographic Studies of the Staphylococcal Complement Inhibitor (SCIN) Bound to C3c and C3b. J.Mol.Biol. 2010 402 17 29 2X7V 20823514 Crystal structure of Thermotoga maritima endonuclease IV in the presence of zinc 2010-03-03 2010-09-08 Tomanicek, S.J.,Hughes, R.C.,Ng, J.D.,Coates, L. Structure of the Endonuclease Iv Homologue from Thermotoga Maritima in the Presence of Active-Site Divalent Metal Ions Acta Crystallogr.,Sect.F 2010 66 1003 0 2X7W 20823514 Crystal structure of Thermotoga maritima endonuclease IV in the presence of cadmium and zinc 2010-03-03 2010-09-08 Tomanicek, S.J.,Hughes, R.C.,Ng, J.D.,Coates, L. Structure of the Endonuclease Iv Homologue from Thermotoga Maritima in the Presence of Active-Site Divalent Metal Ions Acta Crystallogr.,Sect.F 2010 66 1003 0 2XC9 20823515 BINARY COMPLEX OF SULFOLOBUS SOLFATARICUS DPO4 DNA POLYMERASE AND 1, N2-ETHENOGUANINE MODIFIED DNA, MAGNESIUM FORM 2010-04-20 2010-09-08 Irimia, A.,Loukachevitch, L.V.,Eoff, R.L.,Guengerich, F.P.,Egli, M. Metal Ion Dependence of the Active Site Conformation of the Trans-Lesion DNA Polymerase Dpo4 from Sulfolobus Solfataricus Acta Crystallogr.,Sect.F 2010 66 1013 0 2XEG 20726553 Human glutamate carboxypeptidase II in complex with Antibody- Recruiting Molecule ARM-P4 2010-05-14 2010-09-08 Zhang, A.X.,Murelli, R.P.,Barinka, C.,Michel, J.,Cocleaza, A.,Jorgensen, W.L.,Lubkowski, J.,Spiegel, D.A. A Remote Arene-Binding Site on Prostate Specific Membrane Antigen Revealed by Antibody-Recruiting Small Molecules. J.Am.Chem.Soc. 2010 132 12711 0 2XEJ 20726553 Human glutamate carboxypeptidase II in complex with ARM-M4, urea- based inhibitor 2010-05-14 2010-09-08 Zhang, A.X.,Murelli, R.P.,Barinka, C.,Michel, J.,Cocleaza, A.,Jorgensen, W.L.,Lubkowski, J.,Spiegel, D.A. A Remote Arene-Binding Site on Prostate Specific Membrane Antigen Revealed by Antibody-Recruiting Small Molecules. J.Am.Chem.Soc. 2010 132 12711 0 3JQ3 21212263 Crystal Structure of Lombricine Kinase, complexed with substrate ADP 2009-09-05 2010-09-15 Bush, D.J.,Kirillova, O.,Clark, S.A.,Davulcu, O.,Fabiola, F.,Xie, Q.,Somasundaram, T.,Ellington, W.R.,Chapman, M.S. The structure of lombricine kinase: implications for phosphagen kinase conformational changes. J.Biol.Chem. 2011 286 9338 9350 3NBA 20851704 Phosphopantetheine Adenylyltranferase from Mycobacterium tuberculosis in complex with adenosine-5'-[(alpha,beta)-methyleno]triphosphate (AMPCPP) 2010-06-03 2010-09-15 Wubben, T.J.,Mesecar, A.D. Kinetic, thermodynamic, and structural insight into the mechanism of phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis. J.Mol.Biol. 2010 404 202 219 3NBK 20851704 Phosphopantetheine Adenylyltransferase from Mycobacterium tuberculosis in complex with 4'-phosphopantetheine 2010-06-03 2010-09-15 Wubben, T.J.,Mesecar, A.D. Kinetic, thermodynamic, and structural insight into the mechanism of phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis. J.Mol.Biol. 2010 404 202 219 3NYE 20809650 Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase in Complex with Imino-Arginine 2010-07-14 2010-09-15 Fu, G.,Yuan, H.,Li, C.,Lu, C.D.,Gadda, G.,Weber, I.T. Conformational changes and substrate recognition in Pseudomonas aeruginosa D-arginine dehydrogenase. Biochemistry 2010 49 8535 8545 3NYF 20809650 Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase in Complex with Imino-Histidine 2010-07-15 2010-09-15 Fu, G.,Yuan, H.,Li, C.,Lu, C.D.,Gadda, G.,Weber, I.T. Conformational changes and substrate recognition in Pseudomonas aeruginosa D-arginine dehydrogenase. Biochemistry 2010 49 8535 8545 3O2U 20832729 S. cerevisiae Ubc12 2010-07-22 2010-09-15 Scott, D.C.,Monda, J.K.,Grace, C.R.,Duda, D.M.,Kriwacki, R.W.,Kurz, T.,Schulman, B.A. A dual E3 mechanism for Rub1 ligation to Cdc53. Mol.Cell 2010 39 784 796 3M5H 20824086 Crystal structure of a H7 influenza virus hemagglutinin complexed with 3SLN 2010-03-12 2010-09-22 Yang, H.,Chen, L.M.,Carney, P.J.,Donis, R.O.,Stevens, J. Structures of receptor complexes of a North American H7N2 influenza hemagglutinin with a loop deletion in the receptor binding site. Plos Pathog. 2010 6 0 0 3M5I 20824086 Crystal structure of a H7 influenza virus hemagglutinin complexed with 6SLN 2010-03-12 2010-09-22 Yang, H.,Chen, L.M.,Carney, P.J.,Donis, R.O.,Stevens, J. Structures of receptor complexes of a North American H7N2 influenza hemagglutinin with a loop deletion in the receptor binding site. Plos Pathog. 2010 6 0 0 3LEX 20876137 2F5 Epitope scaffold elicited anti-HIV-1 monoclonal antibody 11F10 in complex with HIV-1 GP41 2010-01-15 2010-09-29 Ofek, G.,Guenaga, F.J.,Schief, W.R.,Skinner, J.,Baker, D.,Wyatt, R.,Kwong, P.D. Elicitation of structure-specific antibodies by epitope scaffolds. Proc.Natl.Acad.Sci.USA 2010 107 17880 17887 3LEY 20876137 2F5 Epitope scaffold elicited anti-HIV-1 monoclonal antibody 6a7 in complex with HIV-1 GP41 2010-01-15 2010-09-29 Ofek, G.,Guenaga, F.J.,Schief, W.R.,Skinner, J.,Baker, D.,Wyatt, R.,Kwong, P.D. Elicitation of structure-specific antibodies by epitope scaffolds. Proc.Natl.Acad.Sci.USA 2010 107 17880 17887 3LH4 20545851 Crystal Structure of Sialostatin L2 2010-01-21 2010-09-29 Kotsyfakis, M.,Horka, H.,Salat, J.,Andersen, J.F. The crystal structures of two salivary cystatins from the tick Ixodes scapularis and the effect of these inhibitors on the establishment of Borrelia burgdorferi infection in a murine model. Mol.Microbiol. 2010 77 456 470 3MBO Crystal Structure of the Glycosyltransferase BaBshA bound with UDP and L-malate 2010-03-25 2010-09-29 Parsonage, D.,Newton, G.L.,Holder, R.C.,Wallace, B.D.,Paige, C.,Dos Santos, P.C.,Redinbo, M.R.,Fahey, R.C.,Reid, S.D.,Claiborne, A. Characterization of the N-Acetyl-alpha-d-glucosaminyl l-Malate Synthase and Deacetylase Functions for Bacillithiol Biosynthesis in Bacillus anthracis Biochemistry 2010 49 8398 0 3OBL 20961847 Crystal structure of the potent anti-HIV cyanobacterial lectin from Oscillatoria Agardhii 2010-08-06 2010-10-20 Koharudin, L.M.,Furey, W.,Gronenborn, A.M. Novel fold and carbohydrate specificity of the potent anti-HIV cyanobacterial lectin from Oscillatoria agardhii. J.Biol.Chem. 2011 286 1588 1597 3NRC 21045289 Crystal Structure of the Francisella tularensis enoyl-acyl carrier protein reductase (FabI) in complex with NAD+ and triclosan 2010-06-30 2010-11-10 Mehboob, S.,Truong, K.,Santarsiero, B.D.,Johnson, M.E. Structure of the Francisella tularensis enoyl-acyl carrier protein reductase (FabI) in complex with NAD(+) and triclosan. Acta Crystallogr.,Sect.F 2010 66 1436 1440 3K46 21051639 Crystal structure of full-length E. coli beta-glucuronidase 2009-10-05 2010-11-17 Wallace, B.D.,Wang, H.,Lane, K.T.,Scott, J.E.,Orans, J.,Koo, J.S.,Venkatesh, M.,Jobin, C.,Yeh, L.A.,Mani, S.,Redinbo, M.R. Alleviating cancer drug toxicity by inhibiting a bacterial enzyme. Science 2010 330 831 835 3K4A 21051639 Crystal structure of selenomethionine substituted E. coli beta-glucuronidase 2009-10-05 2010-11-17 Wallace, B.D.,Wang, H.,Lane, K.T.,Scott, J.E.,Orans, J.,Koo, J.S.,Venkatesh, M.,Jobin, C.,Yeh, L.A.,Mani, S.,Redinbo, M.R. Alleviating cancer drug toxicity by inhibiting a bacterial enzyme. Science 2010 330 831 835 3K4D 21051639 Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound 2009-10-05 2010-11-17 Wallace, B.D.,Wang, H.,Lane, K.T.,Scott, J.E.,Orans, J.,Koo, J.S.,Venkatesh, M.,Jobin, C.,Yeh, L.A.,Mani, S.,Redinbo, M.R. Alleviating cancer drug toxicity by inhibiting a bacterial enzyme. Science 2010 330 831 835 3LPF 21051639 Structure of E. coli beta-Glucuronidase bound with a novel, potent inhibitor 1-((6,7-dimethyl-2-oxo-1,2-dihydroquinolin-3-yl)methyl)-1-(2-hydroxyethyl)-3-(3-methoxyphenyl)thiourea 2010-02-05 2010-11-17 Wallace, B.D.,Wang, H.,Lane, K.T.,Scott, J.E.,Orans, J.,Koo, J.S.,Venkatesh, M.,Jobin, C.,Yeh, L.A.,Mani, S.,Redinbo, M.R. Alleviating cancer drug toxicity by inhibiting a bacterial enzyme. Science 2010 330 831 835 3MNV 21076400 Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment 2010-04-22 2010-11-17 Nicely, N.I.,Dennison, S.M.,Spicer, L.,Scearce, R.M.,Kelsoe, G.,Ueda, Y.,Chen, H.,Liao, H.X.,Alam, S.M.,Haynes, B.F. Crystal structure of a non-neutralizing antibody to the HIV-1 gp41 membrane-proximal external region. Nat.Struct.Mol.Biol. 2010 17 1492 1494 3MNW Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment with a gp41 MPER-derived peptide in a helical conformation 2010-04-22 2010-11-17 Nicely, N.I.,Dennison, S.M.,Kelsoe, G.,Ueda, Y.,Liao, H.X.,Alam, S.M.,Haynes, B.F. Crystal Structure of a Non-Neutralizing HIV-1 gp41 Envelope Antibody Demonstrates Neutralization Mechanism of gp41 Antibodies To be Published 0 0 0 0 3MNZ Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment with a gp41 MPER-derived peptide bearing Ala substitutions in a helical conformation 2010-04-22 2010-11-17 Nicely, N.I.,Dennison, S.M.,Kelsoe, G.,Ueda, Y.,Liao, H.-X.,Alam, S.M.,Haynes, B.F. Crystal Structure of a Non-Neutralizing HIV-1 gp41 Envelope Antibody Demonstrates Neutralization Mechanism of gp41 Antibodies To be Published 0 0 0 0 3MO1 Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment 2010-04-22 2010-11-17 Nicely, N.I.,Dennison, S.M.,Kelsoe, G.,Ueda, Y.,Liao, H.-X.,Alam, S.M.,Haynes, B.F. Crystal Structure of a Non-Neutralizing HIV-1 gp41 Envelope Antibody Demonstrates Neutralization Mechanism of gp41 Antibodies To be Published 0 0 0 0 3LB3 20816071 Two-site competitive inhibition in dehaloperoxidase-hemoglobin 2010-01-07 2010-11-24 Thompson, M.K.,Davis, M.F.,de Serrano, V.,Nicoletti, F.P.,Howes, B.D.,Smulevich, G.,Franzen, S. Internal binding of halogenated phenols in dehaloperoxidase-hemoglobin inhibits peroxidase function. Biophys.J. 2010 99 1586 1595 3LB3 20816071 Two-site competitive inhibition in dehaloperoxidase-hemoglobin 2010-01-07 2010-11-24 Thompson, M.K.,Davis, M.F.,de Serrano, V.,Nicoletti, F.P.,Howes, B.D.,Smulevich, G.,Franzen, S. Internal binding of halogenated phenols in dehaloperoxidase-hemoglobin inhibits peroxidase function. Biophys.J. 2010 99 1586 1595 3ONW 21115486 Structure of a G-alpha-i1 mutant with enhanced affinity for the RGS14 GoLoco motif. 2010-08-30 2010-11-24 Bosch, D.E.,Kimple, A.J.,Sammond, D.W.,Muller, R.E.,Miley, M.J.,Machius, M.,Kuhlman, B.,Willard, F.S.,Siderovski, D.P. Structural Determinants of Affinity Enhancement between GoLoco Motifs and G-Protein {alpha} Subunit Mutants. J.Biol.Chem. 2011 286 3351 3358 3OBU 21070952 Crystal structure of the Tsg101 UEV domain in complex with a HIV-1 PTAP peptide 2010-08-09 2010-12-01 Im, Y.J.,Kuo, L.,Ren, X.,Burgos, P.V.,Zhao, X.Z.,Liu, F.,Burke, T.R.,Bonifacino, J.S.,Freed, E.O.,Hurley, J.H. Crystallographic and Functional Analysis of the ESCRT-I /HIV-1 Gag PTAP Interaction. Structure 2010 18 1536 1547 3MQ2 20639535 Crystal Structure of 16S rRNA Methyltranferase KamB 2010-04-27 2010-12-08 Macmaster, R.,Zelinskaya, N.,Savic, M.,Rankin, C.R.,Conn, G.L. Structural insights into the function of aminoglycoside-resistance A1408 16S rRNA methyltransferases from antibiotic-producing and human pathogenic bacteria. Nucleic Acids Res. 2010 38 7791 7799 3MTE 20639535 Crystal Structure of 16S rRNA Methyltranferase 2010-04-30 2010-12-08 Macmaster, R.,Zelinskaya, N.,Savic, M.,Rankin, C.R.,Conn, G.L. Structural insights into the function of aminoglycoside-resistance A1408 16S rRNA methyltransferases from antibiotic-producing and human pathogenic bacteria. Nucleic Acids Res. 2010 38 7791 7799 3OS5 21151116 SET7/9-Dnmt1 K142me1 complex 2010-09-08 2010-12-15 Esteve, P.O.,Chang, Y.,Samaranayake, M.,Upadhyay, A.K.,Horton, J.R.,Feehery, G.R.,Cheng, X.,Pradhan, S. A methylation and phosphorylation switch between an adjacent lysine and serine determines human DNMT1 stability. Nat.Struct.Mol.Biol. 2011 18 42 48 3O49 21173271 Crystal structure of Symfoil-1: de novo designed beta-trefoil architecture with symmetric primary structure 2010-07-26 2010-12-22 Lee, J.,Blaber, M. Experimental support for the evolution of symmetric protein architecture from a simple peptide motif. Proc.Natl.Acad.Sci.USA 2011 108 126 130 3O4B 21173271 Crystal structure of Symfoil-4T: de novo designed beta-trefoil architecture with symmetric primary structure 2010-07-26 2010-12-22 Lee, J.,Blaber, M. Experimental support for the evolution of symmetric protein architecture from a simple peptide motif. Proc.Natl.Acad.Sci.USA 2011 108 126 130 3O4C 21173271 Crystal structure of Symfoil-4V: de novo designed beta-trefoil architecture with symmetric primary structure 2010-07-26 2010-12-22 Lee, J.,Blaber, M. Experimental support for the evolution of symmetric protein architecture from a simple peptide motif. Proc.Natl.Acad.Sci.USA 2011 108 126 130 3O4D 21173271 Crystal structure of Symfoil-4P: de novo designed beta-trefoil architecture with symmetric primary structure 2010-07-26 2010-12-22 Lee, J.,Blaber, M. Experimental support for the evolution of symmetric protein architecture from a simple peptide motif. Proc.Natl.Acad.Sci.USA 2011 108 126 130 3OB7 21206062 Human Thymidylate Synthase R163K with Cys 195 covalently modified by Glutathione 2010-08-06 2010-12-22 Gibson, L.M.,Celeste, L.R.,Lovelace, L.L.,Lebioda, L. Structures of human thymidylate synthase R163K with dUMP, FdUMP and glutathione show asymmetric ligand binding. Acta Crystallogr.,Sect.D 2011 67 60 66 3NGV 21152418 Crystal structure of AnSt-D7L1 2010-06-13 2010-12-29 Alvarenga, P.H.,Francischetti, I.M.,Calvo, E.,Sa-Nunes, A.,Ribeiro, J.M.,Andersen, J.F. The function and three-dimensional structure of a thromboxane a(2)/cysteinyl leukotriene-binding protein from the saliva of a mosquito vector of the malaria parasite. Plos Biol. 2010 8 0 0 3P3C 21167751 Crystal Structure of the Aquifex aeolicus LpxC/LPC-009 complex 2010-10-04 2011-01-05 Lee, C.J.,Liang, X.,Chen, X.,Zeng, D.,Joo, S.H.,Chung, H.S.,Barb, A.W.,Swanson, S.M.,Nicholas, R.A.,Li, Y.,Toone, E.J.,Raetz, C.R.,Zhou, P. Species-specific and inhibitor-dependent conformations of LpxC: implications for antibiotic design. Chem.Biol. 2011 18 38 47 3P3E 21167751 Crystal Structure of the PSEUDOMONAS AERUGINOSA LpxC/LPC-009 complex 2010-10-04 2011-01-05 Lee, C.J.,Liang, X.,Chen, X.,Zeng, D.,Joo, S.H.,Chung, H.S.,Barb, A.W.,Swanson, S.M.,Nicholas, R.A.,Li, Y.,Toone, E.J.,Raetz, C.R.,Zhou, P. Species-specific and inhibitor-dependent conformations of LpxC: implications for antibiotic design. Chem.Biol. 2011 18 38 47 3P3G 21167751 Crystal Structure of the Escherichia coli LpxC/LPC-009 complex 2010-10-04 2011-01-05 Lee, C.J.,Liang, X.,Chen, X.,Zeng, D.,Joo, S.H.,Chung, H.S.,Barb, A.W.,Swanson, S.M.,Nicholas, R.A.,Li, Y.,Toone, E.J.,Raetz, C.R.,Zhou, P. Species-specific and inhibitor-dependent conformations of LpxC: implications for antibiotic design. Chem.Biol. 2011 18 38 47 3PIQ 21191009 Crystal structure of human 2909 Fab, a quaternary structure-specific antibody against HIV-1 2010-11-07 2011-01-05 Changela, A.,Wu, X.,Yang, Y.,Zhang, B.,Zhu, J.,Nardone, G.A.,O'Dell, S.,Pancera, M.,Gorny, M.K.,Phogat, S.,Robinson, J.E.,Stamatatos, L.,Zolla-Pazner, S.,Mascola, J.R.,Kwong, P.D. Crystal Structure of Human Antibody 2909 Reveals Conserved Features of Quaternary Structure-Specific Antibodies That Potently Neutralize HIV-1. J.Virol. 2011 85 2524 2535 3P05 21248851 X-ray structure of pentameric HIV-1 CA 2010-09-27 2011-01-12 Pornillos, O.,Ganser-Pornillos, B.K.,Yeager, M. Atomic-level modelling of the HIV capsid. Nature 2011 469 424 427 3OHI 21333622 Structure of Giardia fructose-1,6-biphosphate aldolase in complex with 3-hydroxy-2-pyridone 2010-08-17 2011-01-19 Li, Z.,Liu, Z.,Cho, D.W.,Zou, J.,Gong, M.,Breece, R.M.,Galkin, A.,Li, L.,Zhao, H.,Maestas, G.D.,Tierney, D.L.,Herzberg, O.,Dunaway-Mariano, D.,Mariano, P.S. Rational design, synthesis and evaluation of first generation inhibitors of the Giardia lamblia fructose-1,6-biphosphate aldolase. J.Inorg.Biochem. 2010 105 509 517 3QEF 21339299 The structure and function of an arabinan-specific alpha-1,2-arabinofuranosidase identified from screening the activities of bacterial GH43 glycoside hydrolases 2011-01-20 2011-02-16 Cartmell, A.,McKee, L.S.,Pena, M.J.,Larsbrink, J.,Brumer, H.,Kaneko, S.,Ichinose, H.,Lewis, R.J.,Vikso-Nielsen, A.,Gilbert, H.J.,Marles-Wright, J. The Structure and Function of an Arabinan-specific {alpha}-1,2-Arabinofuranosidase Identified from Screening the Activities of Bacterial GH43 Glycoside Hydrolases. J.Biol.Chem. 2011 286 15483 15495 3O3Q 21315087 Crystal structure of ""L44F/M67I/L73V/A103G/deletion 104-106/F108Y/V109L/L111I/C117V/R119G/deletion 120-122"" mutant form of Human acidic fibroblast growth factor 2010-07-25 2011-02-23 Lee, J.,Blaber, S.I.,Dubey, V.K.,Blaber, M. A polypeptide ""building block""top-down symmetric deconstruction"". J.Mol.Biol. 2011 407 744 763 3MSX Crystal structure of RhoA.GDP.MgF3 in complex with GAP domain of ArhGAP20 2010-04-29 2011-03-16 Utepbergenov, D.,Cooper, D.R.,Derewenda, U.,Somlyo, A.V.,Derewenda, Z.S. Mechanism of molecular specificity of RhoGAP domains towards small GTPases of RhoA family. To be Published 0 0 0 0 3QEN 21351740 S74E dCK in complex with 5-bromodeoxycytidine and UDP 2011-01-20 2011-03-16 Hazra, S.,Szewczak, A.,Ort, S.,Konrad, M.,Lavie, A. Post-translational phosphorylation of serine 74 of human deoxycytidine kinase favors the enzyme adopting the open conformation making it competent for nucleoside binding and release. Biochemistry 2011 50 2870 2880 3QEO 21351740 S74E-R104M-D133A dCK variant in complex with L-deoxythymidine and UDP 2011-01-20 2011-03-16 Hazra, S.,Szewczak, A.,Ort, S.,Konrad, M.,Lavie, A. Post-translational phosphorylation of serine 74 of human deoxycytidine kinase favors the enzyme adopting the open conformation making it competent for nucleoside binding and release. Biochemistry 2011 50 2870 2880 3OJY 21454577 Crystal Structure of Human Complement Component C8 2010-08-23 2011-04-13 Lovelace, L.L.,Cooper, C.L.,Sodetz, J.M.,Lebioda, L. Structure of human C8 protein provides mechanistic insight into membrane pore formation by complement. J.Biol.Chem. 2011 286 17585 17592 3PWM 21446746 HIV-1 Protease Mutant L76V with Darunavir 2010-12-08 2011-04-20 Louis, J.M.,Zhang, Y.,Sayer, J.M.,Wang, Y.F.,Harrison, R.W.,Weber, I.T. The L76V Drug Resistance Mutation Decreases the Dimer Stability and Rate of Autoprocessing of HIV-1 Protease by Reducing Internal Hydrophobic Contacts. Biochemistry 2011 50 4786 4795 3QEA 21496642 Crystal structure of human exonuclease 1 Exo1 (WT) in complex with DNA (complex II) 2011-01-20 2011-04-20 Orans, J.,McSweeney, E.A.,Iyer, R.R.,Hast, M.A.,Hellinga, H.W.,Modrich, P.,Beese, L.S. Structures of human exonuclease 1 DNA complexes suggest a unified mechanism for nuclease family. Cell(Cambridge,Mass.) 2011 145 212 223 3QEB 21496642 Crystal structure of human exonuclease 1 Exo1 (WT) in complex with DNA and Mn2+ (complex III) 2011-01-20 2011-04-20 Orans, J.,McSweeney, E.A.,Iyer, R.R.,Hast, M.A.,Hellinga, H.W.,Modrich, P.,Beese, L.S. Structures of human exonuclease 1 DNA complexes suggest a unified mechanism for nuclease family. Cell(Cambridge,Mass.) 2011 145 212 223 3QGH 21441029 Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase genotype 1a complex with N-cyclopropyl-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide 2011-01-24 2011-04-20 Gentles, R.G.,Sheriff, S.,Beno, B.R.,Wan, C.,Kish, K.,Ding, M.,Zheng, X.,Chupak, L.,Poss, M.A.,Witmer, M.R.,Morin, P.,Wang, Y.K.,Rigat, K.,Lemm, J.,Voss, S.,Liu, M.,Pelosi, L.,Roberts, S.B.,Gao, M.,Kadow, J.F. Investigation of the mode of binding of a novel series of N-benzyl-4-heteroaryl-1-(phenylsulfonyl)piperazine-2-carboxamides to the hepatitis C virus polymerase. Bioorg.Med.Chem.Lett. 2011 21 2212 2215 2Y96 21543850 Structure of human dual-specificity phosphatase 27 2011-02-11 2011-04-27 Lountos, G.T.,Tropea, J.E.,Waugh, D.S. Structure of Human Dual-Specificity Phosphatase at 2.38A Resolution Acta Crystallogr.,Sect.D 2011 67 471 0 3ONU 21525337 Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 2010-08-30 2011-05-11 Hansman, G.S.,Biertumpfel, C.,Georgiev, I.,McLellan, J.S.,Chen, L.,Zhou, T.,Katayama, K.,Kwong, P.D. Crystal Structures of GII.10 and GII.12 Norovirus Protruding Domains in Complex with Histo-Blood Group Antigens Reveal Details for a Potential Site of Vulnerability. J.Virol. 2011 85 6687 6701 3ONY 21525337 Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with Fucose 2010-08-30 2011-05-11 Hansman, G.S.,Biertumpfel, C.,Georgiev, I.,McLellan, J.S.,Chen, L.,Zhou, T.,Katayama, K.,Kwong, P.D. Crystal Structures of GII.10 and GII.12 Norovirus Protruding Domains in Complex with Histo-Blood Group Antigens Reveal Details for a Potential Site of Vulnerability. J.Virol. 2011 85 6687 6701 3PA1 21525337 Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with HBGA type A 2010-10-18 2011-05-11 Hansman, G.S.,Biertumpfel, C.,Georgiev, I.,McLellan, J.S.,Chen, L.,Zhou, T.,Katayama, K.,Kwong, P.D. Crystal Structures of GII.10 and GII.12 Norovirus Protruding Domains in Complex with Histo-Blood Group Antigens Reveal Details for a Potential Site of Vulnerability. J.Virol. 2011 85 6687 6701 3PA2 21525337 Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with HBGA type Ley 2010-10-18 2011-05-11 Hansman, G.S.,Biertumpfel, C.,Georgiev, I.,McLellan, J.S.,Chen, L.,Zhou, T.,Katayama, K.,Kwong, P.D. Crystal Structures of GII.10 and GII.12 Norovirus Protruding Domains in Complex with Histo-Blood Group Antigens Reveal Details for a Potential Site of Vulnerability. J.Virol. 2011 85 6687 6701 3Q38 21525337 Crystal structure of P domain from norwalk virus strain vietnam 026 in complex with HBGA type B (triglycan) 2010-12-21 2011-05-11 Hansman, G.S.,Biertumpfel, C.,Georgiev, I.,McLellan, J.S.,Chen, L.,Zhou, T.,Katayama, K.,Kwong, P.D. Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability. J.Virol. 2011 85 6687 6701 3Q39 21525337 Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with HBGA type H2 (diglycan) 2010-12-21 2011-05-11 Hansman, G.S.,Biertumpfel, C.,Georgiev, I.,McLellan, J.S.,Chen, L.,Zhou, T.,Katayama, K.,Kwong, P.D. Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability. J.Virol. 2011 85 6687 6701 3Q3A 21525337 Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with HBGA type H2 (triglycan) 2010-12-21 2011-05-11 Hansman, G.S.,Biertumpfel, C.,Georgiev, I.,McLellan, J.S.,Chen, L.,Zhou, T.,Katayama, K.,Kwong, P.D. Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability. J.Virol. 2011 85 6687 6701 3Q6Q 21525337 Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with disordered HBGA type Lea 2011-01-03 2011-05-11 Hansman, G.S.,Biertumpfel, C.,Georgiev, I.,McLellan, J.S.,Chen, L.,Zhou, T.,Katayama, K.,Kwong, P.D. Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability. J.Virol. 2011 85 6687 6701 3Q6R 21525337 Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with disordered HBGA type Lex 2011-01-03 2011-05-11 Hansman, G.S.,Biertumpfel, C.,Georgiev, I.,McLellan, J.S.,Chen, L.,Zhou, T.,Katayama, K.,Kwong, P.D. Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability. J.Virol. 2011 85 6687 6701 3QT5 21561869 Crystal structure of Staphylococcus epidermidis mevalonate diphosphate decarboxylase 2011-02-22 2011-05-11 Barta, M.L.,Skaff, D.A.,McWhorter, W.J.,Herdendorf, T.J.,Miziorko, H.M.,Geisbrecht, B.V. Crystal structures of Staphylococcus epidermidis mevalonate diphosphate decarboxylase bound to inhibitory analogs reveal new insight into substrate binding and catalysis. J.Biol.Chem. 2011 286 23900 23910 3QT6 21561869 Crystal structure of Staphylococcus epidermidis mevalonate diphosphate decarboxylase complexed with inhibitor DPGP 2011-02-22 2011-05-11 Barta, M.L.,Skaff, D.A.,McWhorter, W.J.,Herdendorf, T.J.,Miziorko, H.M.,Geisbrecht, B.V. Crystal structures of Staphylococcus epidermidis mevalonate diphosphate decarboxylase bound to inhibitory analogs reveal new insight into substrate binding and catalysis. J.Biol.Chem. 2011 286 23900 23910 3QT8 21561869 Crystal structure of mutant S192A Staphylococcus epidermidis mevalonate diphosphate decarboxylase complexed with inhibitor 6-FMVAPP 2011-02-22 2011-05-11 Barta, M.L.,Skaff, D.A.,McWhorter, W.J.,Herdendorf, T.J.,Miziorko, H.M.,Geisbrecht, B.V. Crystal structures of Staphylococcus epidermidis mevalonate diphosphate decarboxylase bound to inhibitory analogs reveal new insight into substrate binding and catalysis. J.Biol.Chem. 2011 286 23900 23910 3R6J 21525337 Crystal Structure of the Capsid P Domain from Norwalk Virus Strain Hiroshima/1999 2011-03-21 2011-05-11 Hansman, G.S.,Biertumpfel, C.,Georgiev, I.,McLellan, J.S.,Chen, L.,Zhou, T.,Katayama, K.,Kwong, P.D. Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability. J.Virol. 2011 85 6687 6701 3R6K 21525337 Crystal Structure of the Capsid P Domain from Norwalk Virus Strain Hiroshima/1999 in complex with HBGA type B (triglycan) 2011-03-21 2011-05-11 Hansman, G.S.,Biertumpfel, C.,Georgiev, I.,McLellan, J.S.,Chen, L.,Zhou, T.,Katayama, K.,Kwong, P.D. Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability. J.Virol. 2011 85 6687 6701 3NUU 24900229 phosphoinositide-dependent kinase-1 (PDK1) with fragment11 2010-07-07 2011-05-25 Medina, J.R.,Blackledge, C.W.,Heerding, D.A.,Campobasso, N.,Ward, P.,Briand, J.,Wright, L.,Axten, J.M. Aminoindazole PDK1 Inhibitors: A Case Study in Fragment-Based Drug Discovery. ACS Med Chem Lett 2010 1 439 442 3PZA 21647777 Fully Reduced (All-ferrous) Pyrococcus rubrerythrin after a 10 second exposure to peroxide. 2010-12-14 2011-06-22 Dillard, B.D.,Demick, J.M.,Adams, M.W.,Lanzilotta, W.N. A cryo-crystallographic time course for peroxide reduction by rubrerythrin from Pyrococcus furiosus. J.Biol.Inorg.Chem. 2011 16 949 959 3R2C 21652641 Crystal Structure of Antitermination Factors NusB and NusE in complex with BoxA RNA 2011-03-14 2011-06-22 Stagno, J.R.,Altieri, A.S.,Bubunenko, M.,Tarasov, S.G.,Li, J.,Court, D.L.,Byrd, R.A.,Ji, X. Structural basis for RNA recognition by NusB and NusE in the initiation of transcription antitermination. Nucleic Acids Res. 2011 39 7803 7815 3R2D 21652641 Crystal Structure of Antitermination Factors NusB and NusE in complex with dsRNA 2011-03-14 2011-06-22 Stagno, J.R.,Altieri, A.S.,Bubunenko, M.,Tarasov, S.G.,Li, J.,Court, D.L.,Byrd, R.A.,Ji, X. Structural basis for RNA recognition by NusB and NusE in the initiation of transcription antitermination. Nucleic Acids Res. 2011 39 7803 7815 3R9W 21646538 Crystal structure of Era in complex with MgGDPNP and nucleotides 1506-1542 of 16S ribosomal RNA 2011-03-26 2011-06-22 Tu, C.,Zhou, X.,Tarasov, S.G.,Tropea, J.E.,Austin, B.P.,Waugh, D.S.,Court, D.L.,Ji, X. The Era GTPase recognizes the GAUCACCUCC sequence and binds helix 45 near the 3' end of 16S rRNA. Proc.Natl.Acad.Sci.USA 2011 108 10156 10161 3R9X 21646538 Crystal structure of Era in complex with MgGDPNP, nucleotides 1506-1542 of 16S ribosomal RNA, and KsgA 2011-03-26 2011-06-22 Tu, C.,Zhou, X.,Tarasov, S.G.,Tropea, J.E.,Austin, B.P.,Waugh, D.S.,Court, D.L.,Ji, X. The Era GTPase recognizes the GAUCACCUCC sequence and binds helix 45 near the 3' end of 16S rRNA. Proc.Natl.Acad.Sci.USA 2011 108 10156 10161 3S90 21648001 Human vinculin head domain Vh1 (residues 1-252) in complex with murine talin (VBS33; residues 1512-1546) 2011-05-31 2011-06-22 Yogesha, S.D.,Sharff, A.,Bricogne, G.,Izard, T. Intermolecular versus intramolecular interactions of the vinculin binding site 33 of talin. Protein Sci. 2011 20 1471 1476 3RY9 21698144 Crystal Structure of the Resurrected Ancestral Glucocorticoid Receptor 1 in complex with DOC 2011-05-11 2011-06-29 Carroll, S.M.,Ortlund, E.A.,Thornton, J.W. Mechanisms for the evolution of a derived function in the ancestral glucocorticoid receptor. PLoS Genet 2011 7 0 0 3QXT 21557375 Structure of an Anti-Methotrexate CDR1-3 Graft VHH Antibody in Complex with Methotrexate 2011-03-02 2011-07-06 Fanning, S.W.,Horn, J.R. An anti-hapten camelid antibody reveals a cryptic binding site with significant energetic contributions from a nonhypervariable loop. Protein Sci. 2011 20 1196 1207 3QXU 21557375 Free Structure of an Anti-Methotrexate CDR1-3 Graft VHH Antibody 2011-03-02 2011-07-06 Fanning, S.W.,Horn, J.R. An anti-hapten camelid antibody reveals a cryptic binding site with significant energetic contributions from a nonhypervariable loop. Protein Sci. 2011 20 1196 1207 3O7N The V59W mutation blocks the distal pocket of the hemoglobin - dehaloperoxidase from Amphitrite ornata 2010-07-30 2011-07-13 Davis, M.F.,de Serrano, V.S.,Gracz, H.,Vendreix, F.A.P.,Somasundram, A.,Negrerie, M.,Franzen, S. The V59W mutation blocks the distal pocket of the hemoglobin - dehaloperoxidase from Amphitirite ornata To be Published 0 0 0 0 3NVI 20864039 Structure of N-terminal truncated Nop56/58 bound with L7Ae and box C/D RNA 2010-07-08 2011-07-20 Xue, S.,Wang, R.,Yang, F.,Terns, R.M.,Terns, M.P.,Zhang, X.,Maxwell, E.S.,Li, H. Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle. Mol.Cell 2010 39 939 949 3NVM 20864039 Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle 2010-07-08 2011-07-20 Xue, S.,Wang, R.,Yang, F.,Terns, R.M.,Terns, M.P.,Zhang, X.,Maxwell, E.S.,Li, H. Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle. Mol.Cell 2010 39 939 949 3QXV 21557375 Structure of an Anti-Methotrexate CDR1-4 Graft VHH Antibody in Complex with Methotrexate 2011-03-02 2011-07-27 Fanning, S.W.,Horn, J.R. An anti-hapten camelid antibody reveals a cryptic binding site with significant energetic contributions from a nonhypervariable loop. Protein Sci. 2011 20 1196 1207 3QXW 21557375 Free structure of an anti-methotrexate CDR1-4 Graft VHH Antibody 2011-03-02 2011-07-27 Fanning, S.W.,Horn, J.R. An anti-hapten camelid antibody reveals a cryptic binding site with significant energetic contributions from a nonhypervariable loop. Protein Sci. 2011 20 1196 1207 3SI8 20577208 Human DNA polymerase eta - DNA ternary complex with the 5'T of a CPD in the active site (TT2) 2011-06-17 2011-08-03 Biertumpfel, C.,Zhao, Y.,Kondo, Y.,Ramon-Maiques, S.,Gregory, M.,Lee, J.Y.,Masutani, C.,Lehmann, A.R.,Hanaoka, F.,Yang, W. Structure and mechanism of human DNA polymerase eta. Nature 2010 465 1044 1048 3QSK 21766385 5 Histidine Variant of the anti-RNase A VHH in Complex with RNAse A 2011-02-21 2011-08-10 Murtaugh, M.L.,Fanning, S.W.,Sharma, T.M.,Terry, A.M.,Horn, J.R. A combinatorial histidine scanning library approach to engineer highly pH-dependent protein switches. Protein Sci. 2011 20 1619 1631 3SE8 21835983 Crystal structure of broadly and potently neutralizing antibody VRC03 in complex with HIV-1 gp120 2011-06-10 2011-08-10 Wu, X.,Zhou, T.,Zhu, J.,Zhang, B.,Georgiev, I.,Wang, C.,Chen, X.,Longo, N.S.,Louder, M.,McKee, K.,O'Dell, S.,Perfetto, S.,Schmidt, S.D.,Shi, W.,Wu, L.,Yang, Y.,Yang, Z.Y.,Yang, Z.,Zhang, Z.,Bonsignori, M.,Crump, J.A.,Kapiga, S.H.,Sam, N.E.,Haynes, B.F.,Simek, M.,Burton, D.R.,Koff, W.C.,Doria-Rose, N.A.,Connors, M.,Mullikin, J.C.,Nabel, G.J.,Roederer, M.,Shapiro, L.,Kwong, P.D.,Mascola, J.R. Focused evolution of HIV-1 neutralizing antibodies revealed by structures and deep sequencing. Science 2011 333 1593 1602 3ST5 21800876 Crystal structure of wild-type HIV-1 protease with C3-Substituted Hexahydrocyclopentafuranyl Urethane as P2-Ligand, GRL-0489A 2011-07-08 2011-08-17 Ghosh, A.K.,Chapsal, B.D.,Parham, G.L.,Steffey, M.,Agniswamy, J.,Wang, Y.F.,Amano, M.,Weber, I.T.,Mitsuya, H. Design of HIV-1 Protease Inhibitors with C3-Substituted Hexahydrocyclopentafuranyl Urethanes as P2-Ligands: Synthesis, Biological Evaluation, and Protein-Ligand X-ray Crystal Structure. J.Med.Chem. 2011 54 5890 5901 3OJ1 Structure of the H55D mutant of dehaloperoxidase-hemoglobin A from Amphitrite ornata 2010-08-20 2011-08-24 Zhao, J.,De Serrano, V.S.,Franzen, S. Effect of the H55D mutation on the kinetics and structure of dehaloperoxidase-hemoglobin A To be Published 0 0 0 0 3OLV 27589219 Structural and functional effects of substitution at position T+1 in CheY: CheYA88V-BeF3-Mg complex 2010-08-26 2011-08-31 Immormino, R.M.,Silversmith, R.E.,Bourret, R.B. A Variable Active Site Residue Influences the Kinetics of Response Regulator Phosphorylation and Dephosphorylation. Biochemistry 2016 55 5595 5609 3OLX 27589219 Structural and functional effects of substitution at position T+1 in CheY: CheYA88S-BeF3-Mn complex 2010-08-26 2011-08-31 Immormino, R.M.,Silversmith, R.E.,Bourret, R.B. A Variable Active Site Residue Influences the Kinetics of Response Regulator Phosphorylation and Dephosphorylation. Biochemistry 2016 55 5595 5609 3OLY 27589219 Structural and functional effects of substitution at position T+1 in CheY: CheYA88M-BeF3-Mn complex 2010-08-26 2011-08-31 Immormino, R.M.,Silversmith, R.E.,Bourret, R.B. A Variable Active Site Residue Influences the Kinetics of Response Regulator Phosphorylation and Dephosphorylation. Biochemistry 2016 55 5595 5609 3OK5 Structure of the H55D mutant of dehaloperoxidase-hemoglobin A from Amphitriti ornata with 4-Bromophenol inhibitor 2010-08-24 2011-09-07 Zhao, J.,De Serrano, V.S.,Franzen, S. Effect of the H55D mutation on the kinetics and structure of dehaloperoxidase-hemoglobin A To be Published 0 0 0 0 3SXS 21883956 Crystal structure of BMX non-receptor tyrosine kinase complexed with PP2 2011-07-15 2011-09-21 Muckelbauer, J.,Sack, J.S.,Ahmed, N.,Burke, J.,Chang, C.Y.,Gao, M.,Tino, J.,Xie, D.,Tebben, A.J. X-ray crystal structure of bone marrow kinase in the x chromosome: a Tec family kinase. Chem.Biol.Drug Des. 2011 78 739 748 3REG 21930699 Crystal structure of EhRho1 bound to a GTP analog and Magnesium 2011-04-04 2011-09-28 Bosch, D.E.,Wittchen, E.S.,Qiu, C.,Burridge, K.,Siderovski, D.P. Unique structural and nucleotide exchange features of the Rho1 GTPase of Entamoeba histolytica. J.Biol.Chem. 2011 286 39236 39246 3S97 21969550 PTPRZ CNTN1 complex 2011-05-31 2011-09-28 Lamprianou, S.,Chatzopoulou, E.,Thomas, J.L.,Bouyain, S.,Harroch, S. A complex between contactin-1 and the protein tyrosine phosphatase PTPRZ controls the development of oligodendrocyte precursor cells. Proc.Natl.Acad.Sci.USA 2011 108 17498 17503 3TS3 23658448 Crystal structure of the projection domain of the turkey astrovirus capsid protein at 1.5 angstrom resolution 2011-09-12 2011-09-28 DuBois, R.M.,Freiden, P.,Marvin, S.,Reddivari, M.,Heath, R.J.,White, S.W.,Schultz-Cherry, S. Crystal structure of the avian astrovirus capsid spike. J.Virol. 2013 87 7853 7863 3TSV 22030391 crystal structure of the third PDZ domain of the human ZO-1 MAGUK protein 2011-09-13 2011-10-12 Nomme, J.,Fanning, A.S.,Caffrey, M.,Lye, M.F.,Anderson, J.M.,Lavie, A. The Src Homology 3 Domain Is Required for Junctional Adhesion Molecule Binding to the Third PDZ Domain of the Scaffolding Protein ZO-1. J.Biol.Chem. 2011 286 43352 43360 3TSW 22030391 crystal structure of the PDZ3-SH3-GUK core module of Human ZO-1 2011-09-13 2011-10-12 Nomme, J.,Fanning, A.S.,Caffrey, M.,Lye, M.F.,Anderson, J.M.,Lavie, A. The Src Homology 3 Domain Is Required for Junctional Adhesion Molecule Binding to the Third PDZ Domain of the Scaffolding Protein ZO-1. J.Biol.Chem. 2011 286 43352 43360 3TSZ 22030391 crystal structure of PDZ3-SH3-GUK core module from human ZO-1 in complex with 12mer peptide from human JAM-A cytoplasmic tail 2011-09-13 2011-10-12 Nomme, J.,Fanning, A.S.,Caffrey, M.,Lye, M.F.,Anderson, J.M.,Lavie, A. The Src Homology 3 Domain Is Required for Junctional Adhesion Molecule Binding to the Third PDZ Domain of the Scaffolding Protein ZO-1. J.Biol.Chem. 2011 286 43352 43360 3PV8 22006298 Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to DNA and ddTTP-dA in Closed Conformation 2010-12-06 2011-10-19 Wang, W.,Hellinga, H.W.,Beese, L.S. Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis. Proc.Natl.Acad.Sci.USA 2011 108 17644 17648 3PX0 22006298 Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to DNA and dCTP-dA Mismatch (tautomer) in Closed Conformation 2010-12-09 2011-10-19 Wang, W.,Hellinga, H.W.,Beese, L.S. Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis. Proc.Natl.Acad.Sci.USA 2011 108 17644 17648 3TAP 22006298 Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to Duplex DNA with Cytosine-Adenine Mismatch at (n-3) Position 2011-08-04 2011-10-19 Wang, W.,Hellinga, H.W.,Beese, L.S. Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis. Proc.Natl.Acad.Sci.USA 2011 108 17644 17648 3TAQ 22006298 Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to Duplex DNA with Cytosine-Adenine Mismatch at (n-4) Position 2011-08-04 2011-10-19 Wang, W.,Hellinga, H.W.,Beese, L.S. Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis. Proc.Natl.Acad.Sci.USA 2011 108 17644 17648 3THV 22006298 Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to DNA and ddATP-dT in Closed Conformation 2011-08-19 2011-10-19 Wang, W.,Hellinga, H.W.,Beese, L.S. Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis. Proc.Natl.Acad.Sci.USA 2011 108 17644 17648 3TI0 22006298 Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to DNA and ddGTP-dC in Closed Conformation 2011-08-19 2011-10-19 Wang, W.,Hellinga, H.W.,Beese, L.S. Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis. Proc.Natl.Acad.Sci.USA 2011 108 17644 17648 3RGN 21894979 Crystal structure of spin-labeled BtuB W371R1 2011-04-08 2011-10-26 Freed, D.M.,Khan, A.K.,Horanyi, P.S.,Cafiso, D.S. Molecular Origin of Electron Paramagnetic Resonance Line Shapes on β-Barrel Membrane Proteins: The Local Solvation Environment Modulates Spin-Label Configuration Biochemistry 2011 50 8792 8803 3TB7 22033482 The type I crystal structure of Streptococcus agalactiae sortase C1 2011-08-05 2011-10-26 Khare, B.,Fu, Z.Q.,Huang, I.H.,Ton-That, H.,Narayana, S.V. The Crystal Structure Analysis of Group B Streptococcus Sortase C1: A Model for the ""Lid"" Movement upon Substrate Binding. J.Mol.Biol. 2011 414 563 577 3RY8 22031945 Structural basis for norovirus inhibition and fucose mimicry by citrate 2011-05-11 2011-11-09 Hansman, G.S.,Shahzad-Ul-Hussan, S.,McLellan, J.S.,Chuang, G.Y.,Georgiev, I.,Shimoike, T.,Katayama, K.,Bewley, C.A.,Kwong, P.D. Structural basis for norovirus inhibition and fucose mimicry by citrate. J.Virol. 2012 86 284 292 2YCQ 21963792 Crystal structure of checkpoint kinase 2 in complex with inhibitor PV1115 2011-03-16 2011-11-16 Lountos, G.T.,Jobson, A.G.,Tropea, J.E.,Self, C.R.,Zhang, G.,Pommier, Y.,Shoemaker, R.H.,Waugh, D.S. Structural Characterization of Inhibitor Complexes with Checkpoint Kinase 2 (Chk2), a Drug Target for Cancer Therapy. J.Struct.Biol. 2011 176 292 0 3THR 22037183 Crystal structure of rat native liver Glycine N-methyltransferase complexed with 5-methyltetrahydrofolate monoglutamate 2011-08-19 2011-11-16 Luka, Z.,Pakhomova, S.,Loukachevitch, L.V.,Newcomer, M.E.,Wagner, C. Differences in folate-protein interactions result in differing inhibition of native rat liver and recombinant glycine N-methyltransferase by 5-methyltetrahydrofolate. Biochim.Biophys.Acta 2011 1824 286 291 3THS 22037183 Crystal structure of rat native liver Glycine N-methyltransferase complexed with 5-methyltetrahydrofolate pentaglutamate 2011-08-19 2011-11-16 Luka, Z.,Pakhomova, S.,Loukachevitch, L.V.,Newcomer, M.E.,Wagner, C. Differences in folate-protein interactions result in differing inhibition of native rat liver and recombinant glycine N-methyltransferase by 5-methyltetrahydrofolate. Biochim.Biophys.Acta 2011 1824 286 291 3T49 22086928 Crystal structure of truncated form of Staphylococcal Complement Inhibitor B (SCIN-B) at 1.5 Angstrom 2011-07-25 2011-11-23 Garcia, B.L.,Summers, B.J.,Lin, Z.,Ramyar, K.X.,Ricklin, D.,Kamath, D.V.,Fu, Z.Q.,Lambris, J.D.,Geisbrecht, B.V. Diversity in the C3b Convertase Contact Residues and Tertiary Structures of the Staphylococcal Complement Inhibitor (SCIN) Protein Family. J.Biol.Chem. 2012 287 628 640 3T4A 22086928 Structure of a truncated form of Staphylococcal Complement Inhibitor B bound to human C3c at 3.4 Angstrom resolution 2011-07-25 2011-11-23 Garcia, B.L.,Summers, B.J.,Lin, Z.,Ramyar, K.X.,Ricklin, D.,Kamath, D.V.,Fu, Z.Q.,Lambris, J.D.,Geisbrecht, B.V. Diversity in the C3b Convertase Contact Residues and Tertiary Structures of the Staphylococcal Complement Inhibitor (SCIN) Protein Family. J.Biol.Chem. 2012 287 628 640 3U4B 22113616 CH04H/CH02L Fab P4 2011-10-07 2011-11-30 McLellan, J.S.,Pancera, M.,Carrico, C.,Gorman, J.,Julien, J.P.,Khayat, R.,Louder, R.,Pejchal, R.,Sastry, M.,Dai, K.,O'Dell, S.,Patel, N.,Shahzad-Ul-Hussan, S.,Yang, Y.,Zhang, B.,Zhou, T.,Zhu, J.,Boyington, J.C.,Chuang, G.Y.,Diwanji, D.,Georgiev, I.,Do Kwon, Y.,Lee, D.,Louder, M.K.,Moquin, S.,Schmidt, S.D.,Yang, Z.Y.,Bonsignori, M.,Crump, J.A.,Kapiga, S.H.,Sam, N.E.,Haynes, B.F.,Burton, D.R.,Koff, W.C.,Walker, L.M.,Phogat, S.,Wyatt, R.,Orwenyo, J.,Wang, L.X.,Arthos, J.,Bewley, C.A.,Mascola, J.R.,Nabel, G.J.,Schief, W.R.,Ward, A.B.,Wilson, I.A.,Kwong, P.D. Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9. Nature 2011 480 336 343 3U4E 22113616 Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain CAP45 2011-10-07 2011-11-30 McLellan, J.S.,Pancera, M.,Carrico, C.,Gorman, J.,Julien, J.P.,Khayat, R.,Louder, R.,Pejchal, R.,Sastry, M.,Dai, K.,O'Dell, S.,Patel, N.,Shahzad-Ul-Hussan, S.,Yang, Y.,Zhang, B.,Zhou, T.,Zhu, J.,Boyington, J.C.,Chuang, G.Y.,Diwanji, D.,Georgiev, I.,Do Kwon, Y.,Lee, D.,Louder, M.K.,Moquin, S.,Schmidt, S.D.,Yang, Z.Y.,Bonsignori, M.,Crump, J.A.,Kapiga, S.H.,Sam, N.E.,Haynes, B.F.,Burton, D.R.,Koff, W.C.,Walker, L.M.,Phogat, S.,Wyatt, R.,Orwenyo, J.,Wang, L.X.,Arthos, J.,Bewley, C.A.,Mascola, J.R.,Nabel, G.J.,Schief, W.R.,Ward, A.B.,Wilson, I.A.,Kwong, P.D. Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9. Nature 2011 480 336 343 3R9V 22423359 Cocrystal Structure of Proteolytically Truncated Form of IpaD from Shigella flexneri Bound to Deoxycholate 2011-03-26 2011-12-07 Barta, M.L.,Guragain, M.,Adam, P.,Dickenson, N.E.,Patil, M.,Geisbrecht, B.V.,Picking, W.L.,Picking, W.D. Identification of the bile salt binding site on IpaD from Shigella flexneri and the influence of ligand binding on IpaD structure. Proteins 2012 80 935 945 3SW9 22086334 GLP (G9a-like protein) SET domain in complex with Dnmt3aK44me0 peptide 2011-07-13 2011-12-07 Chang, Y.,Sun, L.,Kokura, K.,Horton, J.R.,Fukuda, M.,Espejo, A.,Izumi, V.,Koomen, J.M.,Bedford, M.T.,Zhang, X.,Shinkai, Y.,Fang, J.,Cheng, X. MPP8 mediates the interactions between DNA methyltransferase Dnmt3a and H3K9 methyltransferase GLP/G9a. Nat Commun 2011 2 533 533 3T54 22119861 Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with ATP and Cadmium 2011-07-26 2011-12-07 Wang, H.,Falck, J.R.,Hall, T.M.,Shears, S.B. Structural basis for an inositol pyrophosphate kinase surmounting phosphate crowding. Nat.Chem.Biol. 2011 8 111 116 3T99 22119861 Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with ADP and in the absence of cadmium at pH 7.0 2011-08-02 2011-12-07 Wang, H.,Falck, J.R.,Hall, T.M.,Shears, S.B. Structural basis for an inositol pyrophosphate kinase surmounting phosphate crowding. Nat.Chem.Biol. 2011 8 111 116 3T9B 22119861 Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with AMPPNP at pH 5.2 2011-08-02 2011-12-07 Wang, H.,Falck, J.R.,Hall, T.M.,Shears, S.B. Structural basis for an inositol pyrophosphate kinase surmounting phosphate crowding. Nat.Chem.Biol. 2011 8 111 116 3T9E 22119861 Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with ADP, 5-(PP)-IP5 (5-IP7) and MgF3 (transition state mimic) 2011-08-02 2011-12-07 Wang, H.,Falck, J.R.,Hall, T.M.,Shears, S.B. Structural basis for an inositol pyrophosphate kinase surmounting phosphate crowding. Nat.Chem.Biol. 2011 8 111 116 3QUS Crystal Structure of N10-Formyltetrahydrofolate Synthetase with ATPgS 2011-02-24 2011-12-14 Celeste, L.R.,Chai, G.,Bielak, M.,Minor, W.,Lovelace, L.L.,Lebioda, L. Crystal Strucutre of N10-Formyltetrahydrofolate Synthetase with ATPgS To be Published 0 0 0 0 3S12 22144894 Crystal structure of H5N1 influenza virus hemagglutinin, strain YU562 crystal form 1 2011-05-14 2011-12-14 DuBois, R.M.,Zaraket, H.,Reddivari, M.,Heath, R.J.,White, S.W.,Russell, C.J. Acid stability of the hemagglutinin protein regulates H5N1 influenza virus pathogenicity. Plos Pathog. 2011 7 0 0 3S6I 21960007 Schizosaccaromyces pombe 3-methyladenine DNA glycosylase (Mag1) in complex with abasic-DNA. 2011-05-25 2011-12-14 Adhikary, S.,Eichman, B.F. Analysis of substrate specificity of Schizosaccharomyces pombe Mag1 alkylpurine DNA glycosylase. Embo Rep. 2011 12 1286 1292 3THW 22179786 Human MutSbeta complexed with an IDL of 4 bases (Loop4) and ADP 2011-08-19 2011-12-21 Gupta, S.,Gellert, M.,Yang, W. Mechanism of mismatch recognition revealed by human MutSbeta bound to unpaired DNA loops Nat.Struct.Mol.Biol. 2012 19 72 78 3SQ5 22155078 Crystal Structure Analysis of the Yeast Tyrosyl-DNA Phosphodiesterase H432N Mutant 2011-07-04 2011-12-28 Gajewski, S.,Comeaux, E.Q.,Jafari, N.,Bharatham, N.,Bashford, D.,White, S.W.,van Waardenburg, R.C. Analysis of the active-site mechanism of tyrosyl-DNA phosphodiesterase I: a member of the phospholipase D superfamily. J.Mol.Biol. 2012 415 741 758 3SQ8 22155078 Crystal Structure Analysis of the Yeast Tyrosyl-DNA Phosphodiesterase 1 H432R Mutant (SCAN1 Mutant) 2011-07-05 2011-12-28 Gajewski, S.,Comeaux, E.Q.,Jafari, N.,Bharatham, N.,Bashford, D.,White, S.W.,van Waardenburg, R.C. Analysis of the active-site mechanism of tyrosyl-DNA phosphodiesterase I: a member of the phospholipase D superfamily. J.Mol.Biol. 2012 415 741 758 3Q1L 22039970 Crystals Structure of Aspartate beta-Semialdehyde Dehydrogenase from Streptococcus pneumoniae with cysteamine bound covalently to Cys 128 2010-12-17 2012-01-04 Pavlovsky, A.G.,Liu, X.,Faehnle, C.R.,Potente, N.,Viola, R.E. Structural Characterization of Inhibitors with Selectivity against Members of a Homologous Enzyme Family. Chem.Biol.Drug Des. 2012 79 128 136 3Q46 23192028 Magnesium activated Inorganic pyrophosphatase from Thermococcus thioreducens bound to hydrolyzed product at 0.99 Angstrom resolution 2010-12-23 2012-01-04 Hughes, R.C.,Coates, L.,Blakeley, M.P.,Tomanicek, S.J.,Langan, P.,Kovalevsky, A.Y.,Garcia-Ruiz, J.M.,Ng, J.D. Inorganic pyrophosphatase crystals from Thermococcus thioreducens for X-ray and neutron diffraction. Acta Crystallogr.,Sect.F 2012 68 1482 1487 3Q4W 23192028 The structure of archaeal inorganic pyrophosphatase in complex with substrate 2010-12-24 2012-01-04 Hughes, R.C.,Coates, L.,Blakeley, M.P.,Tomanicek, S.J.,Langan, P.,Kovalevsky, A.Y.,Garcia-Ruiz, J.M.,Ng, J.D. Inorganic pyrophosphatase crystals from Thermococcus thioreducens for X-ray and neutron diffraction. Acta Crystallogr.,Sect.F 2012 68 1482 1487 3Q5V The structure of inorganic pyrophosphatase from Thermococcus Thioreducens in complex with magnesium and sulfate 2010-12-29 2012-01-04 Hughes, R.C.,Coates, L.,Meehan, E.J.,Ng, J.D. The structure of inorganic pyrophosphatase from Thermococcus Thioreducens in complex with magnesium and sulfate To be Published 0 0 0 0 3RBU 22178733 N-terminally AviTEV-tagged Human Glutamate Carboxypeptidase II in complex with 2-PMPA 2011-03-30 2012-01-04 Tykvart, J.,Sacha, P.,Barinka, C.,Knedlik, T.,Starkova, J.,Lubkowski, J.,Konvalinka, J. Efficient and versatile one-step affinity purification of in vivo biotinylated proteins: Expression, characterization and structure analysis of recombinant human glutamate carboxypeptidase II. Protein Expr.Purif. 2012 82 106 115 3UDE 22169600 Crystal structure of E. coli HPPK in complex with bisubstrate analogue inhibitor J1B 2011-10-28 2012-01-04 Shi, G.,Shaw, G.,Liang, Y.H.,Subburaman, P.,Li, Y.,Wu, Y.,Yan, H.,Ji, X. Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New design with improved properties. Bioorg.Med.Chem. 2012 20 47 57 3NFR Casimiroin analog inhibitor of quinone reductase 2 2010-06-10 2012-01-11 Sturdy, M.,Maiti, A.,Jermihov, K.,Cushman, M.,Mesecar, A.D. X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 To be Published 0 0 0 0 3NHF X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 2010-06-14 2012-01-11 Sturdy, M. X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 To be Published 0 0 0 0 3NHJ X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 2010-06-14 2012-01-11 Sturdy, M. X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 To be Published 0 0 0 0 3NHK X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 2010-06-14 2012-01-11 Sturdy, M. X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 To be Published 0 0 0 0 3NHL X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 2010-06-14 2012-01-11 Sturdy, M. X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 To be Published 0 0 0 0 3NHP X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 2010-06-14 2012-01-11 Sturdy, M. X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 To be Published 0 0 0 0 3NHR X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 2010-06-14 2012-01-11 Sturdy, M. X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 To be Published 0 0 0 0 3NHS X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 2010-06-14 2012-01-11 Sturdy, M. X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 To be Published 0 0 0 0 3NHU X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 2010-06-14 2012-01-11 Sturdy, M. X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 To be Published 0 0 0 0 3NHW X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 2010-06-14 2012-01-11 Sturdy, M. X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 To be Published 0 0 0 0 3NHY X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 2010-06-14 2012-01-11 Sturdy, M. X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 To be Published 0 0 0 0 3TZO 22203090 The role of I87 of CYP158A2 in oxidative coupling reaction 2011-09-27 2012-01-18 Zhao, B.,Bellamine, A.,Lei, L.,Waterman, M.R. The role of Ile87 of CYP158A2 in oxidative coupling reaction. Arch.Biochem.Biophys. 2012 518 127 132 3US6 23721763 Crystal Structure of Histidine-containing Phosphotransfer Protein MtHPt1 from Medicago truncatula 2011-11-23 2012-01-18 Ruszkowski, M.,Brzezinski, K.,Jedrzejczak, R.,Dauter, M.,Dauter, Z.,Sikorski, M.,Jaskolski, M. Medicago truncatula histidine-containing phosphotransfer protein: Structural and biochemical insights into the cytokinin transduction pathway in plants. Febs J. 2013 280 3709 3720 3U78 22227394 E67-2 selectively inhibits KIAA1718, a human histone H3 lysine 9 Jumonji demethylase 2011-10-13 2012-01-25 Upadhyay, A.K.,Rotili, D.,Han, J.W.,Hu, R.,Chang, Y.,Labella, D.,Zhang, X.,Yoon, Y.S.,Mai, A.,Cheng, X. An Analog of BIX-01294 Selectively Inhibits a Family of Histone H3 Lysine 9 Jumonji Demethylases. J.Mol.Biol. 2012 416 319 327 3R18 22263579 Chicken sulfite oxidase double mutant with altered activity and substrate affinity 2011-03-09 2012-02-08 Qiu, J.A.,Wilson, H.L.,Rajagopalan, K.V. Structure-based alteration of substrate specificity and catalytic activity of sulfite oxidase from sulfite oxidation to nitrate reduction. Biochemistry 2012 51 1134 1147 3R19 22263579 Chicken sulfite oxidase triple mutant with altered activity and substrate affinity 2011-03-09 2012-02-08 Qiu, J.A.,Wilson, H.L.,Rajagopalan, K.V. Structure-based alteration of substrate specificity and catalytic activity of sulfite oxidase from sulfite oxidation to nitrate reduction. Biochemistry 2012 51 1134 1147 3SIX 22281745 Crystal structure of NodZ alpha-1,6-fucosyltransferase soaked with GDP-fucose 2011-06-20 2012-02-08 Brzezinski, K.,Dauter, Z.,Jaskolski, M. Structures of NodZ alpha-1,6-fucosyltransferase in complex with GDP and GDP-fucose Acta Crystallogr.,Sect.D 2012 68 160 168 3SIX 22281745 Crystal structure of NodZ alpha-1,6-fucosyltransferase soaked with GDP-fucose 2011-06-20 2012-02-08 Brzezinski, K.,Dauter, Z.,Jaskolski, M. Structures of NodZ alpha-1,6-fucosyltransferase in complex with GDP and GDP-fucose Acta Crystallogr.,Sect.D 2012 68 160 168 3V7A 22278249 Structural basis for broad detection of genogroup II noroviruses by a monoclonal antibody that binds to a site occluded in the viral particle 2011-12-20 2012-02-08 Hansman, G.S.,Taylor, D.W.,McLellan, J.S.,Smith, T.J.,Georgiev, I.,Tame, J.R.,Park, S.Y.,Yamazaki, M.,Gondaira, F.,Miki, M.,Katayama, K.,Murata, K.,Kwong, P.D. Structural Basis for Broad Detection of Genogroup II Noroviruses by a Monoclonal Antibody That Binds to a Site Occluded in the Viral Particle. J.Virol. 2012 86 3635 3646 3TUL 22321794 Crystal structure of N-terminal region of Type III Secretion Major Translocator SipB (residues 82-226) 2011-09-16 2012-02-15 Barta, M.L.,Dickenson, N.E.,Patil, M.,Keightley, A.,Wyckoff, G.J.,Picking, W.D.,Picking, W.L.,Geisbrecht, B.V. The Structures of Coiled-Coil Domains from Type III Secretion System Translocators Reveal Homology to Pore-Forming Toxins. J.Mol.Biol. 2012 417 395 405 3U0C 22321794 Crystal structure of N-terminal region of Type III Secretion First Translocator IpaB (residues 74-224) 2011-09-28 2012-02-15 Barta, M.L.,Dickenson, N.E.,Patil, M.,Keightley, A.,Wyckoff, G.J.,Picking, W.D.,Picking, W.L.,Geisbrecht, B.V. The Structures of Coiled-Coil Domains from Type III Secretion System Translocators Reveal Homology to Pore-Forming Toxins. J.Mol.Biol. 2012 417 395 405 3U3L 22311975 Crystal structure of the selenomethionine derivative of tablysin-15 2011-10-06 2012-02-15 Xu, X.,Francischetti, I.M.,Lai, R.,Ribeiro, J.M.,Andersen, J.F. Structure of protein having inhibitory disintegrin and leukotriene scavenging functions contained in single domain. J.Biol.Chem. 2012 287 10967 10976 3U3N 22311975 Crystal structure of tablysin-15 2011-10-06 2012-02-15 Xu, X.,Francischetti, I.M.,Lai, R.,Ribeiro, J.M.,Andersen, J.F. Structure of protein having inhibitory disintegrin and leukotriene scavenging functions contained in single domain. J.Biol.Chem. 2012 287 10967 10976 3U8A 22310052 Crystal structure of monomeric reversibly photoswitchable red fluorescent protein rsTagRFP in the OFF state 2011-10-16 2012-02-22 Pletnev, S.,Subach, F.V.,Dauter, Z.,Wlodawer, A.,Verkhusha, V.V. A structural basis for reversible photoswitching of absorbance spectra in red fluorescent protein rsTagRFP. J.Mol.Biol. 2012 417 144 151 3U8C 22310052 Crystal structure of monomeric reversibly photoswitchable red fluorescent protein rsTagRFP in the ON state 2011-10-16 2012-02-22 Pletnev, S.,Subach, F.V.,Dauter, Z.,Wlodawer, A.,Verkhusha, V.V. A structural basis for reversible photoswitching of absorbance spectra in red fluorescent protein rsTagRFP. J.Mol.Biol. 2012 417 144 151 3UGQ 22343532 Crystal structure of the apo form of the yeast mitochondrial threonyl-tRNA synthetase determined at 2.1 Angstrom resolution 2011-11-02 2012-02-22 Ling, J.,Peterson, K.M.,Simonovic, I.,Cho, C.,Soll, D.,Simonovic, M. Yeast mitochondrial threonyl-tRNA synthetase recognizes tRNA isoacceptors by distinct mechanisms and promotes CUN codon reassignment. Proc.Natl.Acad.Sci.USA 2012 109 3281 3286 3UGT 22343532 Crystal structure of the yeast mitochondrial threonyl-tRNA synthetase - orthorhombic crystal form 2011-11-02 2012-02-22 Ling, J.,Peterson, K.M.,Simonovic, I.,Cho, C.,Soll, D.,Simonovic, M. Yeast mitochondrial threonyl-tRNA synthetase recognizes tRNA isoacceptors by distinct mechanisms and promotes CUN codon reassignment. Proc.Natl.Acad.Sci.USA 2012 109 3281 3286 3TIJ 22407322 Crystal structure of a concentrative nucleoside transporter from Vibrio cholerae 2011-08-20 2012-03-07 Johnson, Z.L.,Cheong, C.G.,Lee, S.Y. Crystal structure of a concentrative nucleoside transporter from Vibrio cholerae at 2.4A Nature 2012 483 489 493 3RIK 22047104 The acid beta-glucosidase active site exhibits plasticity in binding 3,4,5,6-tetrahydroxyazepane-based inhibitors: implications for pharmacological chaperone design for gaucher disease 2011-04-13 2012-03-14 Orwig, S.D.,Tan, Y.L.,Grimster, N.P.,Yu, Z.,Powers, E.T.,Kelly, J.W.,Lieberman, R.L. Binding of 3,4,5,6-tetrahydroxyazepanes to the acid-beta-glucosidase active site: implications for pharmacological chaperone design for Gaucher disease Biochemistry 2011 50 10647 10657 3TYU 22383850 Crystal Structure of Dihydropteroate synthetase with Product1 2011-09-26 2012-03-14 Yun, M.K.,Wu, Y.,Li, Z.,Zhao, Y.,Waddell, M.B.,Ferreira, A.M.,Lee, R.E.,Bashford, D.,White, S.W. Catalysis and sulfa drug resistance in dihydropteroate synthase. Science 2012 335 1110 1114 3TYZ 22383850 Crystal Structure of the Yersinia pestis Dihydropteroate synthetase with substrate transition state complex. 2011-09-26 2012-03-14 Yun, M.K.,Wu, Y.,Li, Z.,Zhao, Y.,Waddell, M.B.,Ferreira, A.M.,Lee, R.E.,Bashford, D.,White, S.W. Catalysis and sulfa drug resistance in dihydropteroate synthase. Science 2012 335 1110 1114 3TZF 22383850 Crystal Structure of the Yersinia pestis Dihydropteroate Synthase with Sulfonamide Drug Complex. 2011-09-27 2012-03-14 Yun, M.K.,Wu, Y.,Li, Z.,Zhao, Y.,Waddell, M.B.,Ferreira, A.M.,Lee, R.E.,Bashford, D.,White, S.W. Catalysis and sulfa drug resistance in dihydropteroate synthase. Science 2012 335 1110 1114 3UNG 22405013 Structure of the Cmr2 subunit of the CRISPR RNA silencing complex 2011-11-15 2012-03-21 Cocozaki, A.I.,Ramia, N.F.,Shao, Y.,Hale, C.R.,Terns, R.M.,Terns, M.P.,Li, H. Structure of the Cmr2 Subunit of the CRISPR-Cas RNA Silencing Complex. Structure 2012 20 545 553 3R5U The structure of manganese bound Thermococcus thioreducens Inorganic pyrophosphatase 2011-03-19 2012-03-28 Hughes, R.C.,Coates, L.,Meehan, E.J.,Garcia-Ruiz, J.M.,Ng, J.D. The structure of manganese bound Thermococcus thioreducens Inorganic pyrophosphatase To be Published 0 0 0 0 3R6E The structure of Thermococcus thioreducens' inorganic pyrophosphatase bound to sulfate 2011-03-21 2012-03-28 Hughes, R.C.,Meehan, E.J.,Ng, J.D. The structure of Thermococcus thioreducens' inorganic pyrophosphatase bound to sulfate To be Published 0 0 0 0 4D8Z 22416048 Crystal structure of B. anthracis DHPS with compound 24 2012-01-11 2012-03-28 Zhao, Y.,Hammoudeh, D.,Yun, M.K.,Qi, J.,White, S.W.,Lee, R.E. Structure-Based Design of Novel Pyrimido[4,5-c]pyridazine Derivatives as Dihydropteroate Synthase Inhibitors with Increased Affinity. Chemmedchem 2012 7 861 870 3TGT 22451932 Crystal structure of unliganded HIV-1 clade A/E strain 93TH057 gp120 core 2011-08-17 2012-04-04 Kwon, Y.D.,Finzi, A.,Wu, X.,Dogo-Isonagie, C.,Lee, L.K.,Moore, L.R.,Schmidt, S.D.,Stuckey, J.,Yang, Y.,Zhou, T.,Zhu, J.,Vicic, D.A.,Debnath, A.K.,Shapiro, L.,Bewley, C.A.,Mascola, J.R.,Sodroski, J.G.,Kwong, P.D. Unliganded HIV-1 gp120 core structures assume the CD4-bound conformation with regulation by quaternary interactions and variable loops. Proc.Natl.Acad.Sci.USA 2012 109 5663 5668 4D8A 22416048 Crystal structure of B. anthracis DHPS with compound 21 2012-01-10 2012-04-04 Zhao, Y.,Hammoudeh, D.,Yun, M.K.,Qi, J.,White, S.W.,Lee, R.E. Structure-Based Design of Novel Pyrimido[4,5-c]pyridazine Derivatives as Dihydropteroate Synthase Inhibitors with Increased Affinity. Chemmedchem 2012 7 861 870 4EHP 22493458 Crystal Structure of human vinculin head domain (residues 1-252) in complex with alpha-catenin (residues 277-382) 2012-04-03 2012-04-18 Rangarajan, E.S.,Izard, T. alpha-Catenin unfurls upon binding to vinculin J.Biol.Chem. 2012 287 18492 18499 3V4N 22510038 The Biochemical and Structural Basis for Inhibition of Enterococcus faecalis HMG-CoA Synthatse, mvaS, by Hymeglusin 2011-12-15 2012-04-25 Skaff, D.A.,Ramyar, K.X.,McWhorter, W.J.,Barta, M.L.,Geisbrecht, B.V.,Miziorko, H.M. Biochemical and structural basis for inhibition of Enterococcus faecalis hydroxymethylglutaryl-CoA synthase, mvaS, by hymeglusin. Biochemistry 2012 51 4713 4722 3V4X 22510038 The Biochemical and Structural Basis for Inhibition of Enterococcus faecalis HMG-CoA Synthase, mvaS, by Hymeglusin 2011-12-15 2012-04-25 Skaff, D.A.,Ramyar, K.X.,McWhorter, W.J.,Barta, M.L.,Geisbrecht, B.V.,Miziorko, H.M. Biochemical and structural basis for inhibition of Enterococcus faecalis hydroxymethylglutaryl-CoA synthase, mvaS, by hymeglusin. Biochemistry 2012 51 4713 4722 3RJQ Crystal structure of anti-HIV llama VHH antibody A12 in complex with C186 gp120 2011-04-15 2012-05-02 Chen, L.,McLellan, J.S.,Kwon, Y.D.,Schmidt, S.,Wu, X.,Zhou, T.,Yang, Y.,Zhang, B.,Forsman, A.,Weiss, R.A.,Verrips, T.,Mascola, J.,Kwong, P.D. Crystal structure of anti-HIV A12 VHH of llama antibody in complex with C1086 gp120 To be Published 0 0 0 0 3RVJ 25928369 Structure of the CheY-BeF3 Complex with substitutions at 59 and 89: N59D and E89Q 2011-05-06 2012-05-09 Immormino, R.M.,Starbird, C.A.,Silversmith, R.E.,Bourret, R.B. Probing Mechanistic Similarities between Response Regulator Signaling Proteins and Haloacid Dehalogenase Phosphatases. Biochemistry 2015 54 3514 3527 3RVK 25928369 Structure of the CheY-Mn2+ Complex with substitutions at 59 and 89: N59D E89Q 2011-05-06 2012-05-09 Immormino, R.M.,Starbird, C.A.,Silversmith, R.E.,Bourret, R.B. Probing Mechanistic Similarities between Response Regulator Signaling Proteins and Haloacid Dehalogenase Phosphatases. Biochemistry 2015 54 3514 3527 3RVL 25928369 Structure of the CheY-BeF3 Complex with substitutions at 59 and 89: N59D and E89R 2011-05-06 2012-05-09 Immormino, R.M.,Starbird, C.A.,Silversmith, R.E.,Bourret, R.B. Probing Mechanistic Similarities between Response Regulator Signaling Proteins and Haloacid Dehalogenase Phosphatases. Biochemistry 2015 54 3514 3527 3RVM 25928369 Structure of the CheY-Mn2+ Complex with substitutions at 59 and 89: N59D and E89R 2011-05-06 2012-05-09 Immormino, R.M.,Starbird, C.A.,Silversmith, R.E.,Bourret, R.B. Probing Mechanistic Similarities between Response Regulator Signaling Proteins and Haloacid Dehalogenase Phosphatases. Biochemistry 2015 54 3514 3527 3RVN 25928369 Structure of the CheY-BeF3 Complex with substitutions at 59 and 89: N59D and E89Y 2011-05-06 2012-05-09 Immormino, R.M.,Starbird, C.A.,Silversmith, R.E.,Bourret, R.B. Probing Mechanistic Similarities between Response Regulator Signaling Proteins and Haloacid Dehalogenase Phosphatases. Biochemistry 2015 54 3514 3527 3RVO 25928369 Structure of CheY-Mn2+ Complex with substitutions at 59 and 89: N59D E89Y 2011-05-06 2012-05-09 Immormino, R.M.,Starbird, C.A.,Silversmith, R.E.,Bourret, R.B. Probing Mechanistic Similarities between Response Regulator Signaling Proteins and Haloacid Dehalogenase Phosphatases. Biochemistry 2015 54 3514 3527 3RVR 25928369 Structure of the CheYN59D/E89R Molybdate complex 2011-05-06 2012-05-09 Immormino, R.M.,Starbird, C.A.,Silversmith, R.E.,Bourret, R.B. Probing Mechanistic Similarities between Response Regulator Signaling Proteins and Haloacid Dehalogenase Phosphatases. Biochemistry 2015 54 3514 3527 3RVS 25928369 Structure of the CheYN59D/E89R Tungstate complex 2011-05-06 2012-05-09 Immormino, R.M.,Starbird, C.A.,Silversmith, R.E.,Bourret, R.B. Probing Mechanistic Similarities between Response Regulator Signaling Proteins and Haloacid Dehalogenase Phosphatases. Biochemistry 2015 54 3514 3527 4DL2 22529383 Human DNA polymerase eta inserting dCMPNPP opposite CG template (GG0a) 2012-02-05 2012-05-09 Zhao, Y.,Biertumpfel, C.,Gregory, M.T.,Hua, Y.J.,Hanaoka, F.,Yang, W. Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta Proc.Natl.Acad.Sci.USA 2012 109 7269 7274 4DL3 22529383 Human DNA polymerase eta inserting dCMPNPP opposite GG template (GG0b). 2012-02-05 2012-05-09 Zhao, Y.,Biertumpfel, C.,Gregory, M.T.,Hua, Y.J.,Hanaoka, F.,Yang, W. Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta Proc.Natl.Acad.Sci.USA 2012 109 7269 7274 4DL4 22529383 Human DNA polymerase eta inserting dCMPNPP opposite the 3'G of cisplatin crosslinked Gs (Pt-GG1). 2012-02-05 2012-05-09 Zhao, Y.,Biertumpfel, C.,Gregory, M.T.,Hua, Y.J.,Hanaoka, F.,Yang, W. Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta Proc.Natl.Acad.Sci.USA 2012 109 7269 7274 4DL5 22529383 Human DNA polymerase eta inserting dCMPNPP opposite the 5'G of cisplatin crosslinked Gs (Pt-GG2). 2012-02-05 2012-05-09 Zhao, Y.,Biertumpfel, C.,Gregory, M.T.,Hua, Y.J.,Hanaoka, F.,Yang, W. Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta Proc.Natl.Acad.Sci.USA 2012 109 7269 7274 4DL6 22529383 Human DNA polymerase eta extending primer immediately after cisplatin crosslink (Pt-GG3). 2012-02-05 2012-05-09 Zhao, Y.,Biertumpfel, C.,Gregory, M.T.,Hua, Y.J.,Hanaoka, F.,Yang, W. Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta Proc.Natl.Acad.Sci.USA 2012 109 7269 7274 4DL7 22529383 Human DNA polymerase eta fails to extend primer 2 nucleotide after cisplatin crosslink (Pt-GG4). 2012-02-05 2012-05-09 Zhao, Y.,Biertumpfel, C.,Gregory, M.T.,Hua, Y.J.,Hanaoka, F.,Yang, W. Structural Basis for Chemoresistance to Cisplatin Mediated by DNA Polymerase eta Proc.Natl.Acad.Sci.USA 2012 109 7269 7274 4DK5 22548365 Crystal structure of human PI3K-gamma in complex with a pyridyl-triazine inhibitor 2012-02-03 2012-05-16 Smith, A.L.,D'Angelo, N.D.,Bo, Y.Y.,Booker, S.K.,Cee, V.J.,Herberich, B.,Hong, F.T.,Jackson, C.L.,Lanman, B.A.,Liu, L.,Nishimura, N.,Pettus, L.H.,Reed, A.B.,Tadesse, S.,Tamayo, N.A.,Wurz, R.P.,Yang, K.,Andrews, K.L.,Whittington, D.A.,McCarter, J.D.,Miguel, T.S.,Zalameda, L.,Jiang, J.,Subramanian, R.,Mullady, E.L.,Caenepeel, S.,Freeman, D.J.,Wang, L.,Zhang, N.,Wu, T.,Hughes, P.E.,Norman, M.H. Structure-based design of a novel series of potent, selective inhibitors of the class I phosphatidylinositol 3-kinases. J.Med.Chem. 2012 55 5188 5219 3T57 22545860 Activity and Crystal Structure of Arabidopsis UDP-N-acetylglucosamine acyltransferase 2011-07-26 2012-05-23 Joo, S.H.,Chung, H.S.,Raetz, C.R.,Garrett, T.A. Activity and Crystal Structure of Arabidopsis thalianaUDP-N-Acetylglucosamine Acyltransferase. Biochemistry 2012 51 4322 4330 3UPQ 22584622 Crystal structure of the pre-catalytic ternary complex of polymerase lambda with an rATP analog opposite a templating T. 2011-11-18 2012-05-23 Gosavi, R.A.,Moon, A.F.,Kunkel, T.A.,Pedersen, L.C.,Bebenek, K. The catalytic cycle for ribonucleotide incorporation by human DNA Pol lambda Nucleic Acids Res. 2012 40 7518 7527 3UQ2 22584622 Crystal structure of the post-catalytic product complex of polymerase lambda with an rCMP inserted opposite a templating G and dAMP inserted opposite a templating T at the primer terminus. 2011-11-18 2012-05-23 Gosavi, R.A.,Moon, A.F.,Kunkel, T.A.,Pedersen, L.C.,Bebenek, K. The catalytic cycle for ribonucleotide incorporation by human DNA Pol lambda Nucleic Acids Res. 2012 40 7518 7527 4DQI 22648417 Ternary complex of Bacillus DNA Polymerase I Large Fragment, DNA duplex, and dCTP (paired with dG of template) 2012-02-15 2012-06-06 Wang, W.,Wu, E.Y.,Hellinga, H.W.,Beese, L.S. Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides. J.Biol.Chem. 2012 287 28215 28226 4DQP 22648417 Ternary complex of Bacillus DNA Polymerase I Large Fragment, DNA duplex, and ddCTP (paired with dG of template) 2012-02-16 2012-06-06 Wang, W.,Wu, E.Y.,Hellinga, H.W.,Beese, L.S. Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides. J.Biol.Chem. 2012 287 28215 28226 3UPU 22658750 Crystal structure of the T4 Phage SF1B Helicase Dda 2011-11-18 2012-06-20 He, X.,Byrd, A.K.,Yun, M.K.,Pemble, C.W.,Harrison, D.,Yeruva, L.,Dahl, C.,Kreuzer, K.N.,Raney, K.D.,White, S.W. The T4 Phage SF1B Helicase Dda Is Structurally Optimized to Perform DNA Strand Separation. Structure 2012 20 1189 1200 4DJ8 22674977 Structure of the hemagglutinin complexed with 6SLN from a highly pathogenic H7N7 influenza virus 2012-02-01 2012-06-20 Yang, H.,Carney, P.J.,Donis, R.O.,Stevens, J. Structure and receptor complexes of the hemagglutinin from a highly pathogenic H7N7 influenza virus. J.Virol. 2012 86 8645 8652 4EYA 22692544 Crystal Structure of a Plectonemic RNA Supercoil 2012-05-01 2012-06-20 Stagno, J.R.,Ma, B.,Li, J.,Altieri, A.S.,Byrd, R.A.,Ji, X. Crystal structure of a plectonemic RNA supercoil. Nat Commun 2012 3 901 901 4ECQ 22785315 Human DNA polymerase eta- DNA ternary complex: AT crystal at pH6.8(K+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECQ 22785315 Human DNA polymerase eta- DNA ternary complex: AT crystal at pH6.8(K+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECQ 22785315 Human DNA polymerase eta- DNA ternary complex: AT crystal at pH6.8(K+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECR 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 40 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECR 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 40 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECR 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 40 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECS 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 80 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECS 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 80 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECS 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 80 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECT 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 140 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECT 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 140 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECT 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 140 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECU 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 200 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECU 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 200 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECU 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 200 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECV 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 230 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECV 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 230 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECV 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 230 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECW 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 250 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECW 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 250 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECW 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 250 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECX 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 300 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECX 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 300 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECX 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 7.0 for 300 sec 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECY 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 6.0 (Na+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECY 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 6.0 (Na+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECY 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 6.0 (Na+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECZ 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 6.5 (Na+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECZ 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 6.5 (Na+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ECZ 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 6.5 (Na+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED0 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 6.8 (Na+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED0 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 6.8 (Na+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED0 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 6.8 (Na+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED1 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 7.0 (Na+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED1 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 7.0 (Na+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED1 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 7.0 (Na+ MES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED2 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 7.2 (Na+ HEPES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED2 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 7.2 (Na+ HEPES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED2 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 7.2 (Na+ HEPES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED3 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 7.5 (Na+ HEPES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED3 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 7.5 (Na+ HEPES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED3 22785315 Human DNA polymerase eta - DNA ternary complex: AT crystal at pH 7.5 (Na+ HEPES) with 1 Ca2+ ion 2012-03-26 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED7 22785315 Human DNA polymerase eta - DNA ternary complex: TG crystal at pH 7.0 (K+ MES) with 1 Ca2+ ion 2012-03-27 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED7 22785315 Human DNA polymerase eta - DNA ternary complex: TG crystal at pH 7.0 (K+ MES) with 1 Ca2+ ion 2012-03-27 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED7 22785315 Human DNA polymerase eta - DNA ternary complex: TG crystal at pH 7.0 (K+ MES) with 1 Ca2+ ion 2012-03-27 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED8 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the TG crystal at pH 7.0, Normal translocation 2012-03-27 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED8 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the TG crystal at pH 7.0, Normal translocation 2012-03-27 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4ED8 22785315 Human DNA polymerase eta - DNA ternary complex: Reaction in the TG crystal at pH 7.0, Normal translocation 2012-03-27 2012-07-11 Nakamura, T.,Zhao, Y.,Yamagata, Y.,Hua, Y.J.,Yang, W. Watching DNA polymerase eta make a phosphodiester bond Nature 2012 487 196 201 4EW0 22740654 mouse MBD4 glycosylase domain in complex with a G:5hmU (5-hydroxymethyluracil) mismatch 2012-04-26 2012-07-11 Hashimoto, H.,Zhang, X.,Cheng, X. Excision of thymine and 5-hydroxymethyluracil by the MBD4 DNA glycosylase domain: structural basis and implications for active DNA demethylation. Nucleic Acids Res. 2012 40 8276 8284 4EW4 22740654 mouse MBD4 glycosylase domain in complex with DNA containing a ribose sugar 2012-04-26 2012-07-11 Hashimoto, H.,Zhang, X.,Cheng, X. Excision of thymine and 5-hydroxymethyluracil by the MBD4 DNA glycosylase domain: structural basis and implications for active DNA demethylation. Nucleic Acids Res. 2012 40 8276 8284 4F7V 22727779 Crystal structure of E. coli HPPK in complex with bisubstrate analogue inhibitor J1D (HP26) 2012-05-16 2012-07-11 Shi, G.,Shaw, G.,Li, Y.,Wu, Y.,Yan, H.,Ji, X. Bisubstrate analog inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New lead exhibits a distinct binding mode. Bioorg.Med.Chem. 2012 20 4303 4309 4FOC 22734674 Crystal structure of human anaplastic lymphoma kinase in complex with acyliminobenzimidazole inhibitor 2 2012-06-20 2012-07-11 Lewis, R.T.,Bode, C.M.,Choquette, D.M.,Potashman, M.,Romero, K.,Stellwagen, J.C.,Teffera, Y.,Moore, E.,Whittington, D.A.,Chen, H.,Epstein, L.F.,Emkey, R.,Andrews, P.S.,Yu, V.L.,Saffran, D.C.,Xu, M.,Drew, A.,Merkel, P.,Szilvassy, S.,Brake, R.L. The Discovery and Optimization of a Novel Class of Potent, Selective, and Orally Bioavailable Anaplastic Lymphoma Kinase (ALK) Inhibitors with Potential Utility for the Treatment of Cancer. J.Med.Chem. 2012 55 6523 6540 4DLS 22845804 H-Ras Set 1 CaCl2 'Mixed' 2012-02-06 2012-08-08 Holzapfel, G.,Buhrman, G.,Mattos, C. Shift in the Equilibrium between On and Off States of the Allosteric Switch in Ras-GppNHp Affected by Small Molecules and Bulk Solvent Composition. Biochemistry 2012 51 6114 6126 4DLT 22845804 H-Ras Set 2 Ca(OAc)2, on 2012-02-06 2012-08-08 Holzapfel, G.,Buhrman, G.,Mattos, C. Shift in the Equilibrium between On and Off States of the Allosteric Switch in Ras-GppNHp Affected by Small Molecules and Bulk Solvent Composition. Biochemistry 2012 51 6114 6126 4DLU 22845804 H-Ras Set 1 Ca(OAc)2, on 2012-02-06 2012-08-08 Holzapfel, G.,Buhrman, G.,Mattos, C. Shift in the Equilibrium between On and Off States of the Allosteric Switch in Ras-GppNHp Affected by Small Molecules and Bulk Solvent Composition. Biochemistry 2012 51 6114 6126 4DLV 22845804 H-Ras Set 2 CaCl2/DTT, ordered off 2012-02-06 2012-08-08 Holzapfel, G.,Buhrman, G.,Mattos, C. Shift in the Equilibrium between On and Off States of the Allosteric Switch in Ras-GppNHp Affected by Small Molecules and Bulk Solvent Composition. Biochemistry 2012 51 6114 6126 4DLW 22845804 H-Ras Set 2 Ca(OAc)2/DTT, on 2012-02-06 2012-08-08 Holzapfel, G.,Buhrman, G.,Mattos, C. Shift in the Equilibrium between On and Off States of the Allosteric Switch in Ras-GppNHp Affected by Small Molecules and Bulk Solvent Composition. Biochemistry 2012 51 6114 6126 4DLX 22845804 H-Ras Set 1 CaCl2/DTE, ordered off 2012-02-06 2012-08-08 Holzapfel, G.,Buhrman, G.,Mattos, C. Shift in the Equilibrium between On and Off States of the Allosteric Switch in Ras-GppNHp Affected by Small Molecules and Bulk Solvent Composition. Biochemistry 2012 51 6114 6126 4DLY 22845804 Set 1 CaCl2/DTT, ordered off 2012-02-06 2012-08-08 Holzapfel, G.,Buhrman, G.,Mattos, C. Shift in the Equilibrium between On and Off States of the Allosteric Switch in Ras-GppNHp Affected by Small Molecules and Bulk Solvent Composition. Biochemistry 2012 51 6114 6126 4DLZ 22845804 H-Ras Set 2 Ca(OAc)2/DTE, ordered off 2012-02-06 2012-08-08 Holzapfel, G.,Buhrman, G.,Mattos, C. Shift in the Equilibrium between On and Off States of the Allosteric Switch in Ras-GppNHp Affected by Small Molecules and Bulk Solvent Composition. Biochemistry 2012 51 6114 6126 4E5E 22876176 Crystal structure of avian influenza virus PAn Apo 2012-03-14 2012-08-08 Dubois, R.M.,Slavish, P.J.,Baughman, B.M.,Yun, M.K.,Bao, J.,Webby, R.J.,Webb, T.R.,White, S.W. Structural and Biochemical Basis for Development of Influenza Virus Inhibitors Targeting the PA Endonuclease. Plos Pathog. 2012 8 0 0 4E5F 22876176 Crystal structure of avian influenza virus PAn bound to compound 1 2012-03-14 2012-08-08 Dubois, R.M.,Slavish, P.J.,Baughman, B.M.,Yun, M.K.,Bao, J.,Webby, R.J.,Webb, T.R.,White, S.W. Structural and Biochemical Basis for Development of Influenza Virus Inhibitors Targeting the PA Endonuclease. Plos Pathog. 2012 8 0 0 4E5G 22876176 Crystal structure of avian influenza virus PAn bound to compound 2 2012-03-14 2012-08-08 Dubois, R.M.,Slavish, P.J.,Baughman, B.M.,Yun, M.K.,Bao, J.,Webby, R.J.,Webb, T.R.,White, S.W. Structural and Biochemical Basis for Development of Influenza Virus Inhibitors Targeting the PA Endonuclease. Plos Pathog. 2012 8 0 0 4E5L 22876176 Crystal structure of avian influenza virus PAn bound to compound 6 2012-03-14 2012-08-08 Dubois, R.M.,Slavish, P.J.,Baughman, B.M.,Yun, M.K.,Bao, J.,Webby, R.J.,Webb, T.R.,White, S.W. Structural and Biochemical Basis for Development of Influenza Virus Inhibitors Targeting the PA Endonuclease. Plos Pathog. 2012 8 0 0 4F0P 22848107 MspJI Restriction Endonuclease - P31 Form 2012-05-04 2012-08-08 Horton, J.R.,Mabuchi, M.Y.,Cohen-Karni, D.,Zhang, X.,Griggs, R.M.,Samaranayake, M.,Roberts, R.J.,Zheng, Y.,Cheng, X. Structure and cleavage activity of the tetrameric MspJI DNA modification-dependent restriction endonuclease. Nucleic Acids Res. 2012 40 9763 9773 4F0Q 22848107 MspJI Restriction Endonuclease - P21 Form 2012-05-04 2012-08-08 Horton, J.R.,Mabuchi, M.Y.,Cohen-Karni, D.,Zhang, X.,Griggs, R.M.,Samaranayake, M.,Roberts, R.J.,Zheng, Y.,Cheng, X. Structure and cleavage activity of the tetrameric MspJI DNA modification-dependent restriction endonuclease. Nucleic Acids Res. 2012 40 9763 9773 4FJO 22859295 Structure of the Rev1 CTD-Rev3/7-Pol kappa RIR complex 2012-06-11 2012-08-08 Wojtaszek, J.,Lee, C.J.,D'Souza, S.,Minesinger, B.,Kim, H.,D'Andrea, A.D.,Walker, G.C.,Zhou, P. Structural basis of Rev1-mediated assembly of a quaternary vertebrate translesion polymerase complex consisting of Rev1, heterodimeric Pol zeta and Pol kappa J.Biol.Chem. 2012 287 33836 33846 4FRF 22896696 Structural Studies and Protein Engineering of Inositol Phosphate Multikinase 2012-06-26 2012-08-15 Endo-Streeter, S.,Tsui, M.K.,Odom, A.R.,Block, J.,York, J.D. Structural studies and protein engineering of inositol phosphate multikinase. J.Biol.Chem. 2012 287 35360 35369 3UJE 22437160 Asymmetric complex of human neuron specific enolase-3-PGA/PEP 2011-11-07 2012-08-22 Qin, J.,Chai, G.,Brewer, J.M.,Lovelace, L.L.,Lebioda, L. Structures of asymmetric complexes of human neuron specific enolase with resolved substrate and product and an analogous complex with two inhibitors indicate subunit interaction and inhibitor cooperativity. J.Inorg.Biochem. 2012 111 187 194 3UJF 22437160 Asymmetric complex of human neuron specific enolase-4-PGA/PEP 2011-11-07 2012-08-22 Qin, J.,Chai, G.,Brewer, J.M.,Lovelace, L.L.,Lebioda, L. Structures of asymmetric complexes of human neuron specific enolase with resolved substrate and product and an analogous complex with two inhibitors indicate subunit interaction and inhibitor cooperativity. J.Inorg.Biochem. 2012 111 187 194 4ERA 22746257 Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase 2012-04-19 2012-08-22 Huo, L.,Fielding, A.J.,Chen, Y.,Li, T.,Iwaki, H.,Hosler, J.P.,Chen, L.,Hasegawa, Y.,Que, L.,Liu, A. Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase Biochemistry 2012 51 5811 5821 4EHX 22826246 Crystal structure of LpxK from Aquifex aeolicus at 1.9 angstrom resolution 2012-04-04 2012-08-29 Emptage, R.P.,Daughtry, K.D.,Pemble, C.W.,Raetz, C.R. Crystal structure of LpxK, the 4'-kinase of lipid A biosynthesis and atypical P-loop kinase functioning at the membrane interface. Proc.Natl.Acad.Sci.USA 2012 109 12956 12961 4EHY 22826246 Crystal structure of LpxK from Aquifex aeolicus in complex with ADP/Mg2+ at 2.2 angstrom resolution 2012-04-04 2012-08-29 Emptage, R.P.,Daughtry, K.D.,Pemble, C.W.,Raetz, C.R. Crystal structure of LpxK, the 4'-kinase of lipid A biosynthesis and atypical P-loop kinase functioning at the membrane interface. Proc.Natl.Acad.Sci.USA 2012 109 12956 12961 3UBD 22846040 Structure of N-terminal domain of RSK2 kinase in complex with flavonoid glycoside SL0101 2011-10-24 2012-09-05 Utepbergenov, D.,Derewenda, U.,Olekhnovich, N.,Szukalska, G.,Banerjee, B.,Hilinski, M.K.,Lannigan, D.A.,Stukenberg, P.T.,Derewenda, Z.S. Insights into the Inhibition of the p90 Ribosomal S6 Kinase (RSK) by the Flavonol Glycoside SL0101 from the 1.5 A Crystal Structure of the N-Terminal Domain of RSK2 with Bound Inhibitor. Biochemistry 2012 51 6499 6510 4EL9 22846040 Structure of N-terminal kinase domain of RSK2 with afzelin 2012-04-10 2012-09-05 Utepbergenov, D.,Derewenda, U.,Olekhnovich, N.,Szukalska, G.,Banerjee, B.,Hilinski, M.K.,Lannigan, D.A.,Stukenberg, P.T.,Derewenda, Z.S. Insights into the Inhibition of the p90 Ribosomal S6 Kinase (RSK) by the Flavonol Glycoside SL0101 from the 1.5 A Crystal Structure of the N-Terminal Domain of RSK2 with Bound Inhibitor. Biochemistry 2012 51 6499 6510 4BAC 23011895 prototype foamy virus strand transfer complexes on product DNA 2012-09-12 2012-10-10 Yin, Z.,Lapkouski, M.,Yang, W.,Craigie, R. Assembly of Prototype Foamy Virus Strand Transfer Complexes on Product DNA Bypassing Catalysis of Integration. Protein Sci. 2012 21 1849 0 4E5X 23042604 Crystal structure of a complex between the human adenovirus type 2 E3-19K protein and MHC class I molecule HLA-A2/Tax 2012-03-14 2012-10-10 Li, L.,Muzahim, Y.,Bouvier, M. Crystal structure of adenovirus E3-19K bound to HLA-A2 reveals mechanism for immunomodulation. Nat.Struct.Mol.Biol. 2012 19 1176 1181 4GZN 23059534 Mouse ZFP57 zinc fingers in complex with methylated DNA 2012-09-06 2012-10-17 Liu, Y.,Toh, H.,Sasaki, H.,Zhang, X.,Cheng, X. An atomic model of Zfp57 recognition of CpG methylation within a specific DNA sequence. Genes Dev. 2012 26 2374 2379 3U3F 25174335 Structural basis for the interaction of Pyk2 PAT domain with paxillin LD motifs 2011-10-05 2012-10-24 Vanarotti, M.S.,Miller, D.J.,Guibao, C.D.,Nourse, A.,Zheng, J.J. Structural and Mechanistic Insights into the Interaction between Pyk2 and Paxillin LD Motifs. J.Mol.Biol. 2014 426 3985 4001 4AZ1 23137716 Crystal structure of the Trypanosoma cruzi protein tyrosine phosphatase TcPTP1, a potential therapeutic target for Chagas' disease 2012-06-22 2012-11-21 Lountos, G.T.,Tropea, J.E.,Waugh, D.S. Structure of the Trypanosoma Cruzi Protein Tyrosine Phosphatase Tcptp1, a Potential Therapeutic Target for Chagas' Disease. Mol.Biochem.Parasitol. 2012 187 1 0 3V5D HLA-A2.1 KVAELVHFL 2011-12-16 2012-12-05 Collins, E.J.,Lee, H.Y. Prediction of conformation and immunogenicity of peptides bound to MHC molecules To be Published 0 0 0 0 3V5H HLA-A2.1 KVAEIVHFL 2011-12-16 2012-12-05 Collins, E.J.,Lee, H.Y. Prediction of immunogenicity of altered-peptide ligands for HIV therapy To be Published 0 0 0 0 4GDK 23202584 Crystal Structure of Human Atg12~Atg5 Conjugate in Complex with an N-terminal Fragment of Atg16L1 2012-07-31 2012-12-05 Otomo, C.,Metlagel, Z.,Takaesu, G.,Otomo, T. Structure of the human ATG12~ATG5 conjugate required for LC3 lipidation in autophagy. Nat.Struct.Mol.Biol. 2013 20 59 66 4GPR 23209297 Crystal structure of EhUbc5, a ubiquitin conjugating enzyme from Entamoeba histolytica 2012-08-21 2012-12-12 Bosch, D.E.,Siderovski, D.P. Structural Determinants of Ubiquitin Conjugation in Entamoeba histolytica. J.Biol.Chem. 2013 288 2290 2302 4HN5 23222642 GR DNA Binding Domain - TSLP nGRE Complex 2012-10-18 2012-12-12 Hudson, W.H.,Youn, C.,Ortlund, E.A. The structural basis of direct glucocorticoid-mediated transrepression. Nat.Struct.Mol.Biol. 2013 20 53 58 4HN6 23222642 GR DNA Binding Domain R460D/D462R - TSLP nGRE Complex 2012-10-18 2012-12-12 Hudson, W.H.,Youn, C.,Ortlund, E.A. The structural basis of direct glucocorticoid-mediated transrepression. Nat.Struct.Mol.Biol. 2013 20 53 58 4H6I 23233676 Crystal Structure of Staphylococcal Complement Inhibitor SCIN-B 2012-09-19 2012-12-19 Garcia, B.L.,Summers, B.J.,Ramyar, K.X.,Tzekou, A.,Lin, Z.,Ricklin, D.,Lambris, J.D.,Laity, J.H.,Geisbrecht, B.V. A Structurally Dynamic N-terminal Helix Is a Key Functional Determinant in Staphylococcal Complement Inhibitor (SCIN) Proteins. J.Biol.Chem. 2013 288 2870 2881 4FN9 23166518 X-ray Crystal structure of the Ancestral 3-keto steroid receptor - Progesterone complex 2012-06-19 2012-12-26 Eick, G.N.,Colucci, J.K.,Harms, M.J.,Ortlund, E.A.,Thornton, J.W. Evolution of minimal specificity and promiscuity in steroid hormone receptors. PLoS Genet. 2012 8 0 0 4G38 23153334 Mutational analysis of sulfite reductase hemoprotein reveals the mechanism for coordinated electron and proton transfer 2012-07-13 2012-12-26 Smith, K.W.,Stroupe, M.E. Mutational analysis of sulfite reductase hemoprotein reveals the mechanism for coordinated electron and proton transfer. Biochemistry 2012 51 9857 9868 4G39 23153334 Mutational analysis of sulfite reductase hemoprotein reveals the mechanism for coordinated electron and proton transfer 2012-07-13 2012-12-26 Smith, K.W.,Stroupe, M.E. Mutational analysis of sulfite reductase hemoprotein reveals the mechanism for coordinated electron and proton transfer. Biochemistry 2012 51 9857 9868 4HPQ 23219485 Crystal Structure of the Atg17-Atg31-Atg29 Complex 2012-10-24 2012-12-26 Ragusa, M.J.,Stanley, R.E.,Hurley, J.H. Architecture of the atg17 complex as a scaffold for autophagosome biogenesis. Cell(Cambridge,Mass.) 2012 151 1501 1512 4IGG 23292143 Full-length human alpha-catenin crystal structure 2012-12-17 2012-12-26 Rangarajan, E.S.,Izard, T. Dimer asymmetry defines alpha-catenin interactions. Nat.Struct.Mol.Biol. 2013 20 188 193 4GET 23275168 Crystal structure of biogenic amine binding protein from Rhodnius prolixus 2012-08-02 2013-01-02 Xu, X.,Chang, B.W.,Mans, B.J.,Ribeiro, J.M.,Andersen, J.F. Structure and ligand-binding properties of the biogenic amine-binding protein from the saliva of a blood-feeding insect vector of Trypanosoma cruzi. Acta Crystallogr.,Sect.D 2013 69 105 113 4B3P 23314251 Structures of HIV-1 RT and RNA-DNA Complex Reveal a Unique RT Conformation and Substrate Interface 2012-07-25 2013-01-16 Lapkouski, M.,Tian, L.,Miller, J.T.,Le Grice, S.F.J.,Yang, W. Complexes of HIV-1 RT, Nnrti and RNA/DNA Hybrid Reveal a Structure Compatible with RNA Degradation Nat.Struct.Mol.Biol. 2013 20 230 0 4HTR 23153334 N149W variant of SiRHP bound to sulfite 2012-11-01 2013-01-16 Smith, K.W.,Stroupe, M.E. Mutational analysis of sulfite reductase hemoprotein reveals the mechanism for coordinated electron and proton transfer. Biochemistry 2012 51 9857 9868 4GUE 23385462 Structure of N-terminal kinase domain of RSK2 with flavonoid glycoside quercitrin 2012-08-29 2013-01-30 Derewenda, U.,Artamonov, M.,Szukalska, G.,Utepbergenov, D.,Olekhnovich, N.,Parikh, H.I.,Kellogg, G.E.,Somlyo, A.V.,Derewenda, Z.S. Identification of quercitrin as an inhibitor of the p90 S6 ribosomal kinase (RSK): structure of its complex with the N-terminal domain of RSK2 at 1.8 A resolution. Acta Crystallogr.,Sect.D 2013 69 266 275 4HPO 23313589 Crystal structure of RV144-elicited antibody CH58 in complex with V2 peptide 2012-10-24 2013-02-06 Liao, H.X.,Bonsignori, M.,Alam, S.M.,McLellan, J.S.,Tomaras, G.D.,Moody, M.A.,Kozink, D.M.,Hwang, K.K.,Chen, X.,Tsao, C.Y.,Liu, P.,Lu, X.,Parks, R.J.,Montefiori, D.C.,Ferrari, G.,Pollara, J.,Rao, M.,Peachman, K.K.,Santra, S.,Letvin, N.L.,Karasavvas, N.,Yang, Z.Y.,Dai, K.,Pancera, M.,Gorman, J.,Wiehe, K.,Nicely, N.I.,Rerks-Ngarm, S.,Nitayaphan, S.,Kaewkungwal, J.,Pitisuttithum, P.,Tartaglia, J.,Sinangil, F.,Kim, J.H.,Michael, N.L.,Kepler, T.B.,Kwong, P.D.,Mascola, J.R.,Nabel, G.J.,Pinter, A.,Zolla-Pazner, S.,Haynes, B.F. Vaccine Induction of Antibodies against a Structurally Heterogeneous Site of Immune Pressure within HIV-1 Envelope Protein Variable Regions 1 and 2. Immunity 2013 38 176 186 4HPY 23313589 Crystal structure of RV144-elicited antibody CH59 in complex with V2 peptide 2012-10-24 2013-02-06 Liao, H.X.,Bonsignori, M.,Alam, S.M.,McLellan, J.S.,Tomaras, G.D.,Moody, M.A.,Kozink, D.M.,Hwang, K.K.,Chen, X.,Tsao, C.Y.,Liu, P.,Lu, X.,Parks, R.J.,Montefiori, D.C.,Ferrari, G.,Pollara, J.,Rao, M.,Peachman, K.K.,Santra, S.,Letvin, N.L.,Karasavvas, N.,Yang, Z.Y.,Dai, K.,Pancera, M.,Gorman, J.,Wiehe, K.,Nicely, N.I.,Rerks-Ngarm, S.,Nitayaphan, S.,Kaewkungwal, J.,Pitisuttithum, P.,Tartaglia, J.,Sinangil, F.,Kim, J.H.,Michael, N.L.,Kepler, T.B.,Kwong, P.D.,Mascola, J.R.,Nabel, G.J.,Pinter, A.,Zolla-Pazner, S.,Haynes, B.F. Vaccine Induction of Antibodies against a Structurally Heterogeneous Site of Immune Pressure within HIV-1 Envelope Protein Variable Regions 1 and 2. Immunity 2013 38 176 186 4HQQ 23313589 Crystal structure of RV144-elicited antibody CH58 2012-10-25 2013-02-06 Liao, H.X.,Bonsignori, M.,Alam, S.M.,McLellan, J.S.,Tomaras, G.D.,Moody, M.A.,Kozink, D.M.,Hwang, K.K.,Chen, X.,Tsao, C.Y.,Liu, P.,Lu, X.,Parks, R.J.,Montefiori, D.C.,Ferrari, G.,Pollara, J.,Rao, M.,Peachman, K.K.,Santra, S.,Letvin, N.L.,Karasavvas, N.,Yang, Z.Y.,Dai, K.,Pancera, M.,Gorman, J.,Wiehe, K.,Nicely, N.I.,Rerks-Ngarm, S.,Nitayaphan, S.,Kaewkungwal, J.,Pitisuttithum, P.,Tartaglia, J.,Sinangil, F.,Kim, J.H.,Michael, N.L.,Kepler, T.B.,Kwong, P.D.,Mascola, J.R.,Nabel, G.J.,Pinter, A.,Zolla-Pazner, S.,Haynes, B.F. Vaccine Induction of Antibodies against a Structurally Heterogeneous Site of Immune Pressure within HIV-1 Envelope Protein Variable Regions 1 and 2. Immunity 2013 38 176 186 4DVT 24489681 Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with AS-II-37 2012-02-23 2013-02-27 Kwon, Y.D.,Lalonde, J.M.,Yang, Y.,Elban, M.A.,Sugawara, A.,Courter, J.R.,Jones, D.M.,Smith, A.B.,Debnath, A.K.,Kwong, P.D. Crystal Structures of HIV-1 gp120 Envelope Glycoprotein in Complex with NBD Analogues That Target the CD4-Binding Site. Plos One 2014 9 0 0 4DVV 24489681 Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with AS-I-261 2012-02-23 2013-02-27 Kwon, Y.D.,Lalonde, J.M.,Yang, Y.,Elban, M.A.,Sugawara, A.,Courter, J.R.,Jones, D.M.,Smith, A.B.,Debnath, A.K.,Kwong, P.D. Crystal Structures of HIV-1 gp120 Envelope Glycoprotein in Complex with NBD Analogues That Target the CD4-Binding Site. Plos One 2014 9 0 0 4DVW 24489681 Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with MAE-II-167 2012-02-23 2013-02-27 Kwon, Y.D.,Lalonde, J.M.,Yang, Y.,Elban, M.A.,Sugawara, A.,Courter, J.R.,Jones, D.M.,Smith, A.B.,Debnath, A.K.,Kwong, P.D. Crystal Structures of HIV-1 gp120 Envelope Glycoprotein in Complex with NBD Analogues That Target the CD4-Binding Site. Plos One 2014 9 0 0 4DVX 24489681 Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with MAE-II-188 2012-02-23 2013-02-27 Kwon, Y.D.,Lalonde, J.M.,Yang, Y.,Elban, M.A.,Sugawara, A.,Courter, J.R.,Jones, D.M.,Smith, A.B.,Debnath, A.K.,Kwong, P.D. Crystal Structures of HIV-1 gp120 Envelope Glycoprotein in Complex with NBD Analogues That Target the CD4-Binding Site. Plos One 2014 9 0 0 4DWU Carbonmonoxy dehaloperoxidase-hemoglobin A structure at 1.44 Angstrom resolution 2012-02-26 2013-02-27 de Serrano, V.S.,Zhao, J.,Franzen, S. A unique role for the distal histidine observed in carbonmonoxy dehaloperoxidase-hemoglobin A structures To be Published 0 0 0 0 4FQG 23436654 Crystal structure of the TCERG1 FF4-6 tandem repeat domain 2012-06-25 2013-02-27 Liu, J.,Fan, S.,Lee, C.J.,Greenleaf, A.L.,Zhou, P. Specific Interaction of the Transcription Elongation Regulator TCERG1 with RNA Polymerase II Requires Simultaneous Phosphorylation at Ser2, Ser5, and Ser7 within the Carboxyl-terminal Domain Repeat. J.Biol.Chem. 2013 288 10890 10901 4FQG 23436654 Crystal structure of the TCERG1 FF4-6 tandem repeat domain 2012-06-25 2013-02-27 Liu, J.,Fan, S.,Lee, C.J.,Greenleaf, A.L.,Zhou, P. Specific Interaction of the Transcription Elongation Regulator TCERG1 with RNA Polymerase II Requires Simultaneous Phosphorylation at Ser2, Ser5, and Ser7 within the Carboxyl-terminal Domain Repeat. J.Biol.Chem. 2013 288 10890 10901 4FQG 23436654 Crystal structure of the TCERG1 FF4-6 tandem repeat domain 2012-06-25 2013-02-27 Liu, J.,Fan, S.,Lee, C.J.,Greenleaf, A.L.,Zhou, P. Specific Interaction of the Transcription Elongation Regulator TCERG1 with RNA Polymerase II Requires Simultaneous Phosphorylation at Ser2, Ser5, and Ser7 within the Carboxyl-terminal Domain Repeat. J.Biol.Chem. 2013 288 10890 10901 4FQG 23436654 Crystal structure of the TCERG1 FF4-6 tandem repeat domain 2012-06-25 2013-02-27 Liu, J.,Fan, S.,Lee, C.J.,Greenleaf, A.L.,Zhou, P. Specific Interaction of the Transcription Elongation Regulator TCERG1 with RNA Polymerase II Requires Simultaneous Phosphorylation at Ser2, Ser5, and Ser7 within the Carboxyl-terminal Domain Repeat. J.Biol.Chem. 2013 288 10890 10901 4H4K 23395183 Structure of the Cmr2-Cmr3 subcomplex of the Cmr RNA-silencing complex 2012-09-17 2013-03-06 Shao, Y.,Cocozaki, A.I.,Ramia, N.F.,Terns, R.M.,Terns, M.P.,Li, H. Structure of the cmr2-cmr3 subcomplex of the cmr RNA silencing complex. Structure 2013 21 376 384 4DKU 25001301 Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-09027 2012-02-04 2013-03-20 Curreli, F.,Kwon, Y.D.,Zhang, H.,Yang, Y.,Scacalossi, D.,Kwong, P.D.,Debnath, A.K. Binding mode characterization of NBD series CD4-mimetic HIV-1 entry inhibitors by X-ray structure and resistance study. Antimicrob. Agents Chemother. 2014 58 5478 5491 4DKV 25001301 Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-10007 2012-02-04 2013-03-20 Curreli, F.,Kwon, Y.D.,Zhang, H.,Yang, Y.,Scacalossi, D.,Kwong, P.D.,Debnath, A.K. Binding mode characterization of NBD series CD4-mimetic HIV-1 entry inhibitors by X-ray structure and resistance study. Antimicrob. Agents Chemother. 2014 58 5478 5491 4JHG 24311578 Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with trans-zeatin 2013-03-05 2013-03-20 Ruszkowski, M.,Szpotkowski, K.,Sikorski, M.,Jaskolski, M. The landscape of cytokinin binding by a plant nodulin. Acta Crystallogr.,Sect.D 2013 69 2365 2380 4JJK 22109967 Crystal Structure of N10-Formyltetrahydrofolate Synthetase with Folate 2013-03-08 2013-03-20 Celeste, L.R.,Chai, G.,Bielak, M.,Minor, W.,Lovelace, L.L.,Lebioda, L. Mechanism of N10-formyltetrahydrofolate synthetase derived from complexes with intermediates and inhibitors. Protein Sci. 2012 21 219 228 4FH6 23480178 Structure of DHP A in complex with 2,4,6-tribromophenol in 10% DMSO 2012-06-05 2013-03-27 Zhao, J.,de Serrano, V.,Zhao, J.,Le, P.,Franzen, S. Structural and Kinetic Study of an Internal Substrate Binding Site in Dehaloperoxidase-Hemoglobin A from Amphitrite ornata. Biochemistry 2013 52 2427 2439 4FH7 23480178 Structure of DHP A in complex with 2,4,6-tribromophenol in 20% methanol 2012-06-05 2013-03-27 Zhao, J.,de Serrano, V.,Zhao, J.,Le, P.,Franzen, S. Structural and Kinetic Study of an Internal Substrate Binding Site in Dehaloperoxidase-Hemoglobin A from Amphitrite ornata. Biochemistry 2013 52 2427 2439 4ILZ 23480178 Structural and kinetic study of an internal substrate binding site of dehaloperoxidase-hemoglobin A from Amphitrite ornata 2013-01-01 2013-03-27 Zhao, J.,de Serrano, V.,Zhao, J.,Le, P.,Franzen, S. Structural and Kinetic Study of an Internal Substrate Binding Site in Dehaloperoxidase-Hemoglobin A from Amphitrite ornata. Biochemistry 2013 52 2427 2439 4J5Q 23481255 TARG1 (C6orf130), Terminal ADP-ribose Glycohydrolase 1, apo structure 2013-02-09 2013-03-27 Sharifi, R.,Morra, R.,Appel, C.D.,Tallis, M.,Chioza, B.,Jankevicius, G.,Simpson, M.A.,Matic, I.,Ozkan, E.,Golia, B.,Schellenberg, M.J.,Weston, R.,Williams, J.G.,Rossi, M.N.,Galehdari, H.,Krahn, J.,Wan, A.,Trembath, R.C.,Crosby, A.H.,Ahel, D.,Hay, R.,Ladurner, A.G.,Timinszky, G.,Williams, R.S.,Ahel, I. Deficiency of terminal ADP-ribose protein glycohydrolase TARG1/C6orf130 in neurodegenerative disease. Embo J. 2013 32 1225 1237 4J5R 23481255 TARG1 (C6orf130), Terminal ADP-ribose Glycohydrolase 1 bound to ADP-HPD 2013-02-09 2013-03-27 Sharifi, R.,Morra, R.,Appel, C.D.,Tallis, M.,Chioza, B.,Jankevicius, G.,Simpson, M.A.,Matic, I.,Ozkan, E.,Golia, B.,Schellenberg, M.J.,Weston, R.,Williams, J.G.,Rossi, M.N.,Galehdari, H.,Krahn, J.,Wan, A.,Trembath, R.C.,Crosby, A.H.,Ahel, D.,Hay, R.,Ladurner, A.G.,Timinszky, G.,Williams, R.S.,Ahel, I. Deficiency of terminal ADP-ribose protein glycohydrolase TARG1/C6orf130 in neurodegenerative disease. Embo J. 2013 32 1225 1237 4ITM 23464738 Crystal structure of ""apo"" form LpxK from Aquifex aeolicus in complex with ATP at 2.2 angstrom resolution 2013-01-18 2013-04-03 Emptage, R.P.,Pemble, C.W.,York, J.D.,Raetz, C.R.,Zhou, P. Mechanistic Characterization of the Tetraacyldisaccharide-1-phosphate 4'-Kinase LpxK Involved in Lipid A Biosynthesis. Biochemistry 2013 52 2280 2290 4ITN 23464738 Crystal structure of ""compact P-loop"" LpxK from Aquifex aeolicus in complex with chloride at 2.2 angstrom resolution 2013-01-18 2013-04-03 Emptage, R.P.,Pemble, C.W.,York, J.D.,Raetz, C.R.,Zhou, P. Mechanistic Characterization of the Tetraacyldisaccharide-1-phosphate 4'-Kinase LpxK Involved in Lipid A Biosynthesis. Biochemistry 2013 52 2280 2290 4JPV 23540694 Crystal structure of broadly and potently neutralizing antibody 3bnc117 in complex with hiv-1 gp120 2013-03-19 2013-04-17 Klein, F.,Diskin, R.,Scheid, J.F.,Gaebler, C.,Mouquet, H.,Georgiev, I.S.,Pancera, M.,Zhou, T.,Incesu, R.B.,Fu, B.Z.,Gnanapragasam, P.N.,Oliveira, T.Y.,Seaman, M.S.,Kwong, P.D.,Bjorkman, P.J.,Nussenzweig, M.C. Somatic Mutations of the Immunoglobulin Framework Are Generally Required for Broad and Potent HIV-1 Neutralization. Cell(Cambridge,Mass.) 2013 153 126 138 4JDR 23580650 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase from escherichia coli 2013-02-25 2013-04-24 Chandrasekhar, K.,Wang, J.,Arjunan, P.,Sax, M.,Park, Y.H.,Nemeria, N.S.,Kumaran, S.,Song, J.,Jordan, F.,Furey, W. Insight to the Interaction of the Dihydrolipoamide Acetyltransferase (E2) Core with the Peripheral Components in the Escherichia coli Pyruvate Dehydrogenase Complex via Multifaceted Structural Approaches. J.Biol.Chem. 2013 288 15402 15417 4HSW 23480794 Structure of the L100F mutant of dehaloperoxidase-hemoglobin A from Amphitrite ornata 2012-10-31 2013-05-01 Plummer, A.,Thompson, M.K.,Franzen, S. Role of polarity of the distal pocket in the control of inhibitor binding in dehaloperoxidase-hemoglobin. Biochemistry 2013 52 2218 2227 4HSX 23480794 Structure of the L100F mutant of dehaloperoxidase-hemoglobin A from Amphitrite ornata with 4-bromophenol 2012-10-31 2013-05-01 Plummer, A.,Thompson, M.K.,Franzen, S. Role of polarity of the distal pocket in the control of inhibitor binding in dehaloperoxidase-hemoglobin. Biochemistry 2013 52 2218 2227 4J9K 23630267 Human DNA polymerase eta-DNA ternary complex: misincorporation G opposite T after a T at the primer 3' end (TA/G) 2013-02-16 2013-05-01 Zhao, Y.,Gregory, M.T.,Biertumpfel, C.,Hua, Y.J.,Hanaoka, F.,Yang, W. Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta. Proc.Natl.Acad.Sci.USA 2013 110 8146 8151 4J9L 23630267 Human DNA polymerase eta-DNA ternary complex: misincorporation G opposite T after a C at the primer 3' end (CA/G) 2013-02-16 2013-05-01 Zhao, Y.,Gregory, M.T.,Biertumpfel, C.,Hua, Y.J.,Hanaoka, F.,Yang, W. Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta. Proc.Natl.Acad.Sci.USA 2013 110 8146 8151 4J9M 23630267 Human DNA polymerase eta-DNA ternary complex: misincorporation G opposite T after an A at the primer 3' end (AA/G) 2013-02-16 2013-05-01 Zhao, Y.,Gregory, M.T.,Biertumpfel, C.,Hua, Y.J.,Hanaoka, F.,Yang, W. Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta. Proc.Natl.Acad.Sci.USA 2013 110 8146 8151 4J9N 23630267 Human DNA polymerase eta-DNA ternary complex: misincorporation G opposite T after a G at the primer 3' end (GA/G) 2013-02-16 2013-05-01 Zhao, Y.,Gregory, M.T.,Biertumpfel, C.,Hua, Y.J.,Hanaoka, F.,Yang, W. Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta. Proc.Natl.Acad.Sci.USA 2013 110 8146 8151 4J9O 23630267 Human DNA polymerase eta-DNA ternary complex: primer extension after a T:G mispair 2013-02-16 2013-05-01 Zhao, Y.,Gregory, M.T.,Biertumpfel, C.,Hua, Y.J.,Hanaoka, F.,Yang, W. Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta. Proc.Natl.Acad.Sci.USA 2013 110 8146 8151 4J9P 23630267 Human DNA polymerase eta-DNA postinsertion binary complex with TA base pair 2013-02-16 2013-05-01 Zhao, Y.,Gregory, M.T.,Biertumpfel, C.,Hua, Y.J.,Hanaoka, F.,Yang, W. Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta. Proc.Natl.Acad.Sci.USA 2013 110 8146 8151 4J9Q 23630267 Human DNA polymerase eta-DNA postinsertion binary complex with TG mispair 2013-02-16 2013-05-01 Zhao, Y.,Gregory, M.T.,Biertumpfel, C.,Hua, Y.J.,Hanaoka, F.,Yang, W. Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta. Proc.Natl.Acad.Sci.USA 2013 110 8146 8151 4J9R 23630267 Human DNA polymerase eta-DNA translocated binary complex with TG mispair 2013-02-16 2013-05-01 Zhao, Y.,Gregory, M.T.,Biertumpfel, C.,Hua, Y.J.,Hanaoka, F.,Yang, W. Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta. Proc.Natl.Acad.Sci.USA 2013 110 8146 8151 4J9S 23630267 Human DNA polymerase eta-DNA translocated binary complex: with TA base pair 2013-02-16 2013-05-01 Zhao, Y.,Gregory, M.T.,Biertumpfel, C.,Hua, Y.J.,Hanaoka, F.,Yang, W. Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta. Proc.Natl.Acad.Sci.USA 2013 110 8146 8151 4EIJ 23637399 Structure of the Mumps virus phosphoprotein oligomerization domain 2012-04-05 2013-05-08 Cox, R.,Green, T.J.,Purushotham, S.,Deivanayagam, C.,Bedwell, G.J.,Prevelige, P.E.,Luo, M. Structural and functional characterization of the mumps virus phosphoprotein. J.Virol. 2013 87 7558 7568 4IWY 23609986 SeMet-substituted RimK structure 2013-01-24 2013-05-08 Zhao, G.,Jin, Z.,Wang, Y.,Allewell, N.M.,Tuchman, M.,Shi, D. Structure and function of Escherichia coli RimK, an ATP-grasp fold, l-glutamyl ligase enzyme. Proteins 2013 81 1847 1854 4J5J 23590295 Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical Isolate PR20 in Complex with Amprenavir 2013-02-08 2013-05-15 Agniswamy, J.,Shen, C.H.,Wang, Y.F.,Ghosh, A.K.,Rao, K.V.,Xu, C.X.,Sayer, J.M.,Louis, J.M.,Weber, I.T. Extreme Multidrug Resistant HIV-1 Protease with 20 Mutations Is Resistant to Novel Protease Inhibitors with P1'-Pyrrolidinone or P2-Tris-tetrahydrofuran. J.Med.Chem. 2013 56 4017 4027 4IVD 23659214 JAK1 kinase (JH1 domain) in complex with compound 34 2013-01-22 2013-05-22 Zak, M.,Hurley, C.A.,Ward, S.I.,Bergeron, P.,Barrett, K.,Balazs, M.,Blair, W.S.,Bull, R.,Chakravarty, P.,Chang, C.,Crackett, P.,Deshmukh, G.,Devoss, J.,Dragovich, P.S.,Eigenbrot, C.,Ellwood, C.,Gaines, S.,Ghilardi, N.,Gibbons, P.,Gradl, S.,Gribling, P.,Hamman, C.,Harstad, E.,Hewitt, P.,Johnson, A.,Johnson, T.,Kenny, J.R.,Koehler, M.F.,Bir Kohli, P.,Labadie, S.,Lee, W.P.,Liao, J.,Liimatta, M.,Mendonca, R.,Narukulla, R.,Pulk, R.,Reeve, A.,Savage, S.,Shia, S.,Steffek, M.,Ubhayakar, S.,van Abbema, A.,Aliagas, I.,Avitabile-Woo, B.,Xiao, Y.,Yang, J.,Kulagowski, J.J. Identification of C-2 Hydroxyethyl Imidazopyrrolopyridines as Potent JAK1 Inhibitors with Favorable Physicochemical Properties and High Selectivity over JAK2. J.Med.Chem. 2013 56 4764 4785 4FE2 24598753 X-Ray Structure of SAICAR Synthetase (PurC) from Streptococcus pneumoniae complexed with AIR, ADP, Asp and Mg2+ 2012-05-29 2013-05-29 Wolf, N.M.,Abad-Zapatero, C.,Johnson, M.E.,Fung, L.W. Structures of SAICAR synthetase (PurC) from Streptococcus pneumoniae with ADP, Mg(2+), AIR and Asp. Acta Crystallogr.,Sect.D 2014 70 841 850 4JQU 23665230 Crystal structure of Ubc7p in complex with the U7BR of Cue1p 2013-03-20 2013-05-29 Metzger, M.B.,Liang, Y.H.,Das, R.,Mariano, J.,Li, S.,Li, J.,Kostova, Z.,Byrd, R.A.,Ji, X.,Weissman, A.M. A Structurally Unique E2-Binding Domain Activates Ubiquitination by the ERAD E2, Ubc7p, through Multiple Mechanisms. Mol.Cell 2013 50 516 527 4FGR X-Ray Structure of SAICAR Synthetase (PurC) from Streptococcus pneumoniae complexed with ADP and Mg2+ 2012-06-04 2013-06-05 0 0 0 0 4KA2 23710622 Crystal structure of CD4-mimetic miniprotein M48U12 in complex with HIV-1 YU2 gp120 2013-04-21 2013-06-19 Morellato-Castillo, L.,Acharya, P.,Combes, O.,Michiels, J.,Descours, A.,Ramos, O.H.,Yang, Y.,Vanham, G.,Arien, K.K.,Kwong, P.D.,Martin, L.,Kessler, P. Interfacial Cavity Filling To Optimize CD4-Mimetic Miniprotein Interactions with HIV-1 Surface Glycoprotein. J.Med.Chem. 2013 56 5033 5047 4IHS 24100318 Crystal Structure of BenM_DBD/catB site 1 DNA Complex 2012-12-19 2013-07-10 Alanazi, A.M.,Neidle, E.L.,Momany, C. The DNA-binding domain of BenM reveals the structural basis for the recognition of a T-N11-A sequence motif by LysR-type transcriptional regulators. Acta Crystallogr.,Sect.D 2013 69 1995 2007 4G2O Human Thymidylate Synthase M190K with bound Purpurogallin 2012-07-12 2013-07-17 Celeste, L.R.,Lovelace, L.L.,Lebioda, L. Oxidation of Cysteine 195 of Huyman Thymidylate Synthase by Purpurogallin To be Published 0 0 0 0 4EZ6 Bacillus DNA Polymerase I Large Fragment Complex 1 2012-05-02 2013-07-24 Wang, W.,Hellinga, H.W.,Beese, L.S. Structures of a High-fidelity DNA Polymerase to be published 0 0 0 0 4F2R DNA Polymerase I Large Fragment complex 3 2012-05-08 2013-07-24 Wang, W.,Hellinga, H.W.,Beese, L.S. Structures of a High-fidelity DNA Polymerase to be published 0 0 0 0 4F2S DNA Polymerase I Large Fragment complex 4 2012-05-08 2013-07-24 Wang, W.,Hellinga, H.W.,Beese, L.S. Structures of a High-fidelity DNA Polymerase to be published 0 0 0 0 4F4K DNA Polymerase I Large Fragment Complex 6 2012-05-10 2013-07-24 Wang, W.,Hellinga, H.W.,Beese, L.S. Structures of a High-fidelity DNA Polymerase to be published 0 0 0 0 4G6W Human Thymidylate Synthase M190K with bound 4-Bromobenzene-1,2,3-triol 2012-07-19 2013-07-24 Celeste, L.R.,Lovelace, L.L.,Lebioda, L. Oxidation of Cysteine 195 of Huyman Thymidylate Synthase by Purpurogallin To be Published 2012 0 0 0 4II0 23823708 Crystal structure of CrataBL, a trypsin inhibitor from Crataeva tapia 2012-12-19 2013-07-24 Ferreira, R.D.,Zhou, D.,Ferreira, J.G.,Silva, M.C.,Silva-Lucca, R.A.,Mentele, R.,Paredes-Gamero, E.J.,Bertolin, T.C.,Dos Santos Correia, M.T.,Paiva, P.M.,Gustchina, A.,Wlodawer, A.,Oliva, M.L. Crystal Structure of Crataeva tapia Bark Protein (CrataBL) and Its Effect in Human Prostate Cancer Cell Lines. Plos One 2013 8 0 0 4F8R Bacillus DNA Polymerase I Large Fragment complex 7 2012-05-17 2013-08-07 Wang, W.,Hellinga, H.W.,Beese, L.S. Structures of a High-fidelity DNA Polymerase to be published 0 0 0 0 4HDF 23298236 Crystal Structure of HIV-1 protease mutants V82A complexed with inhibitor GRL-0519 2012-10-02 2013-08-14 Zhang, H.,Wang, Y.F.,Shen, C.H.,Agniswamy, J.,Rao, K.V.,Xu, C.X.,Ghosh, A.K.,Harrison, R.W.,Weber, I.T. Novel P2 tris-tetrahydrofuran group in antiviral compound 1 (GRL-0519) fills the S2 binding pocket of selected mutants of HIV-1 protease. J.Med.Chem. 2013 56 1074 1083 4IT6 24210908 Crystal structure of amino acid residues 1-120 of CG17282 2013-01-17 2013-08-14 Fan, J.Y.,Agyekum, B.,Venkatesan, A.,Hall, D.R.,Keightley, A.,Bjes, E.S.,Bouyain, S.,Price, J.L. Noncanonical FK506-Binding Protein BDBT Binds DBT to Enhance Its Circadian Function and Forms Foci at Night. Neuron 2013 80 984 996 4L7F 23916259 Co-crystal Structure of JNK1 and AX13587 2013-06-13 2013-08-21 Li, B.,Cociorva, O.M.,Nomanbhoy, T.,Weissig, H.,Li, Q.,Nakamura, K.,Liyanage, M.,Zhang, M.C.,Shih, A.Y.,Aban, A.,Hu, Y.,Cajica, J.,Pham, L.,Kozarich, J.W.,Shreder, K.R. Hit-to-lead optimization and kinase selectivity of imidazo[1,2-a]quinoxalin-4-amine derived JNK1 inhibitors. Bioorg.Med.Chem.Lett. 2013 23 5217 5222 4LSR 23911655 Crystal structure of broadly and potently neutralizing antibody VRC-CH31 in complex with HIV-1 clade A/E stran 93TH057 gp120 with LOOP D and Loop V5 from clade A strain KER_2018_11 2013-07-23 2013-08-21 Zhou, T.,Zhu, J.,Wu, X.,Moquin, S.,Zhang, B.,Acharya, P.,Georgiev, I.S.,Altae-Tran, H.R.,Chuang, G.Y.,Joyce, M.G.,Do Kwon, Y.,Longo, N.S.,Louder, M.K.,Luongo, T.,McKee, K.,Schramm, C.A.,Skinner, J.,Yang, Y.,Yang, Z.,Zhang, Z.,Zheng, A.,Bonsignori, M.,Haynes, B.F.,Scheid, J.F.,Nussenzweig, M.C.,Simek, M.,Burton, D.R.,Koff, W.C.,Mullikin, J.C.,Connors, M.,Shapiro, L.,Nabel, G.J.,Mascola, J.R.,Kwong, P.D. Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies. Immunity 2013 39 245 258 4LST 23911655 Crystal structure of broadly and potently neutralizing antibody VRC01 in complex with HIV-1 clade C strain ZM176.66 gp120 2013-07-23 2013-08-21 Zhou, T.,Zhu, J.,Wu, X.,Moquin, S.,Zhang, B.,Acharya, P.,Georgiev, I.S.,Altae-Tran, H.R.,Chuang, G.Y.,Joyce, M.G.,Do Kwon, Y.,Longo, N.S.,Louder, M.K.,Luongo, T.,McKee, K.,Schramm, C.A.,Skinner, J.,Yang, Y.,Yang, Z.,Zhang, Z.,Zheng, A.,Bonsignori, M.,Haynes, B.F.,Scheid, J.F.,Nussenzweig, M.C.,Simek, M.,Burton, D.R.,Koff, W.C.,Mullikin, J.C.,Connors, M.,Shapiro, L.,Nabel, G.J.,Mascola, J.R.,Kwong, P.D. Multidonor Analysis Reveals Structural Elements, Genetic Determinants, and Maturation Pathway for HIV-1 Neutralization by VRC01-Class Antibodies. Immunity 2013 39 245 258 4IAN 24003220 Crystal Structure of apo Human PRPF4B kinase domain 2012-12-06 2013-08-28 Gao, Q.,Mechin, I.,Kothari, N.,Guo, Z.,Deng, G.,Haas, K.,McManus, J.,Hoffmann, D.,Wang, A.,Wiederschain, D.,Rocnik, J.,Czechtizky, W.,Chen, X.,McLean, L.,Arlt, H.,Harper, D.,Liu, F.,Majid, T.,Patel, V.,Lengauer, C.,Garcia-Echeverria, C.,Zhang, B.,Cheng, H.,Dorsch, M.,Huang, S.M. Evaluation of Cancer Dependence and Druggability of PRP4 Kinase Using Cellular, Biochemical, and Structural Approaches. J.Biol.Chem. 2013 288 30125 30138 4JHZ 23690068 Structure of E. coli beta-Glucuronidase bound with a novel, potent inhibitor 2-[4-(1,3-benzodioxol-5-ylmethyl)piperazin-1-yl]-N-[(1S,2S,5S)-2,5-dimethoxycyclohexyl]acetamide 2013-03-05 2013-08-28 Roberts, A.B.,Wallace, B.D.,Venkatesh, M.K.,Mani, S.,Redinbo, M.R. Molecular Insights into Microbial beta-Glucuronidase Inhibition to Abrogate CPT-11 Toxicity. Mol.Pharmacol. 2013 84 208 217 4KB9 23947685 Crystal structure of wild-type HIV-1 protease with novel tricyclic P2-ligands GRL-0739A 2013-04-23 2013-09-04 Ghosh, A.K.,Parham, G.L.,Martyr, C.D.,Nyalapatla, P.R.,Osswald, H.L.,Agniswamy, J.,Wang, Y.F.,Amano, M.,Weber, I.T.,Mitsuya, H. Highly Potent HIV-1 Protease Inhibitors with Novel Tricyclic P2 Ligands: Design, Synthesis, and Protein-Ligand X-ray Studies. J.Med.Chem. 2013 56 6792 6802 4KMW 23952341 Structure of the Y34N MUTANT OF DEHALOPEROXIDASE-HEMOGLOBIN A FROM AMPHITRITE ORNATA WITH 2,4,6-TRICHLOROPHENOL 2013-05-08 2013-09-04 Wang, C.,Lovelace, L.L.,Sun, S.,Dawson, J.H.,Lebioda, L. Complexes of dual-function hemoglobin/dehaloperoxidase with substrate 2,4,6-trichlorophenol are inhibitory and indicate binding of halophenol to compound I. Biochemistry 2013 52 6203 6210 4KN3 23952341 Structure of the Y34NS91G double mutant of Dehaloperoxidase from Amphitrite ornata with 2,4,6-trichlorophenol 2013-05-08 2013-09-04 Wang, C.,Lovelace, L.L.,Sun, S.,Dawson, J.H.,Lebioda, L. Complexes of dual-function hemoglobin/dehaloperoxidase with substrate 2,4,6-trichlorophenol are inhibitory and indicate binding of halophenol to compound I. Biochemistry 2013 52 6203 6210 4J72 23990562 Crystal Structure of polyprenyl-phosphate N-acetyl hexosamine 1-phosphate transferase 2013-02-12 2013-09-11 Chung, B.C.,Zhao, J.,Gillespie, R.A.,Kwon, D.Y.,Guan, Z.,Hong, J.,Zhou, P.,Lee, S.Y. Crystal structure of MraY, an essential membrane enzyme for bacterial cell wall synthesis. Science 2013 341 1012 1016 4L9J 23982071 Crystal structure of S. aureus MepR in DNA-binding conformation 2013-06-18 2013-09-11 Birukou, I.,Tonthat, N.K.,Seo, S.M.,Schindler, B.D.,Kaatz, G.W.,Brennan, R.G. The molecular mechanisms of allosteric mutations impairing MepR repressor function in multidrug-resistant strains of Staphylococcus aureus. MBio 2013 4 0 0 4L9N 23982071 Crystal structure of MepR A103V mutant from multidrug resistant S. aureus clinical isolate 2013-06-18 2013-09-11 Birukou, I.,Tonthat, N.K.,Seo, S.M.,Schindler, B.D.,Kaatz, G.W.,Brennan, R.G. The molecular mechanisms of allosteric mutations impairing MepR repressor function in multidrug-resistant strains of Staphylococcus aureus. MBio 2013 4 0 0 4L9T 23982071 Crystal structure of MepR F27L mutant from multidrug resistant S. aureus clinical isolate 2013-06-18 2013-09-11 Birukou, I.,Tonthat, N.K.,Seo, S.M.,Schindler, B.D.,Kaatz, G.W.,Brennan, R.G. The molecular mechanisms of allosteric mutations impairing MepR repressor function in multidrug-resistant strains of Staphylococcus aureus. MBio 2013 4 0 0 4IG2 24019523 1.80 Angstroms X-ray crystal structure of R51A and R239A heterodimer 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase from Pseudomonas fluorescens 2012-12-15 2013-09-18 Huo, L.,Davis, I.,Chen, L.,Liu, A. The power of two: arginine 51 and arginine 239* from a neighboring subunit are essential for catalysis in alpha-amino-beta-carboxymuconate-epsilon-semialdehyde decarboxylase. J.Biol.Chem. 2013 288 30862 30871 4JLK 23947754 Human dCK C4S-S74E mutant in complex with UDP and the F2.2.1 inhibitoR (2-[({2-[3-(2-FLUOROETHOXY)-4-METHOXYPHENYL]-5-METHYL-1,3-THIAZOL-4-YL}METHYL)SULFANYL]PYRIMIDINE-4,6-DIAMINE) 2013-03-12 2013-09-18 Murphy, J.M.,Armijo, A.L.,Nomme, J.,Lee, C.H.,Smith, Q.A.,Li, Z.,Campbell, D.O.,Liao, H.I.,Nathanson, D.A.,Austin, W.R.,Lee, J.T.,Darvish, R.,Wei, L.,Wang, J.,Su, Y.,Damoiseaux, R.,Sadeghi, S.,Phelps, M.E.,Herschman, H.R.,Czernin, J.,Alexandrova, A.N.,Jung, M.E.,Lavie, A.,Radu, C.G. Development of new deoxycytidine kinase inhibitors and noninvasive in vivo evaluation using positron emission tomography. J.Med.Chem. 2013 56 6696 6708 4MK4 S197C variant of human ferrochelatase. 2013-09-04 2013-09-25 Lanzilotta, W.N.,Medlock, A.E.,Dailey, T.E.,Dailey, H.A. S197C variant of human ferrochelatase. To be Published 0 0 0 0 4KZ2 23884902 Crystal Structure of phi29 pRNA 3WJ Core 2013-05-29 2013-10-16 Zhang, H.,Endrizzi, J.A.,Shu, Y.,Haque, F.,Sauter, C.,Shlyakhtenko, L.S.,Lyubchenko, Y.,Guo, P.,Chi, Y.I. Crystal structure of 3WJ core revealing divalent ion-promoted thermostability and assembly of the Phi29 hexameric motor pRNA. Rna 2013 19 1226 1237 4IS9 24117400 Crystal Structure of the Escherichia coli LpxC/L-161,240 complex 2013-01-16 2013-10-30 Lee, C.J.,Liang, X.,Gopalaswamy, R.,Najeeb, J.,Ark, E.D.,Toone, E.J.,Zhou, P. Structural Basis of the Promiscuous Inhibitor Susceptibility of Escherichia coli LpxC. Acs Chem.Biol. 2014 9 237 246 4IHG 24196711 Chasing Acyl Carrier Protein Through a Catalytic Cycle of Lipid A Production 2012-12-18 2013-11-13 Masoudi, A.,Raetz, C.R.,Zhou, P.,Pemble, C.W. Chasing acyl carrier protein through a catalytic cycle of lipid A production. Nature 2014 505 422 426 4IHH 24196711 Chasing Acyl Carrier Protein Through a Catalytic Cycle of Lipid A Production 2012-12-18 2013-11-13 Masoudi, A.,Raetz, C.R.,Zhou, P.,Pemble, C.W. Chasing acyl carrier protein through a catalytic cycle of lipid A production. Nature 2014 505 422 426 4KLN 24196964 Structure of p97 N-D1 A232E mutant in complex with ATPgS 2013-05-07 2013-11-13 Tang, W.K.,Xia, D. Altered Intersubunit Communication Is the Molecular Basis for Functional Defects of Pathogenic p97 Mutants. J.Biol.Chem. 2013 288 36624 36635 4KOD 24196964 Structure of p97 N-D1 R155H mutant in complex with ADP 2013-05-11 2013-11-13 Tang, W.K.,Xia, D. Altered Intersubunit Communication Is the Molecular Basis for Functional Defects of Pathogenic p97 Mutants. J.Biol.Chem. 2013 288 36624 36635 4HHV 24260258 Crystal structure of ceramide transfer protein pleckstrin homology domain 2012-10-10 2013-11-27 Prashek, J.,Truong, T.,Yao, X. Crystal Structure of the Pleckstrin Homology Domain from the Ceramide Transfer Protein: Implications for Conformational Change upon Ligand Binding. Plos One 2013 8 0 0 4JLI 24288369 Crystal Structure of Escherichia coli Hfq Proximal Pore Mutant 2013-03-12 2013-12-11 Robinson, K.E.,Orans, J.,Kovach, A.R.,Link, T.M.,Brennan, R.G. Mapping Hfq-RNA interaction surfaces using tryptophan fluorescence quenching. Nucleic Acids Res. 2014 42 2736 2749 4JRI 24288369 Crystal Structure of Escherichia coli Hfq Proximal Edge Mutant 2013-03-21 2013-12-11 Robinson, K.E.,Orans, J.,Kovach, A.R.,Link, T.M.,Brennan, R.G. Mapping Hfq-RNA interaction surfaces using tryptophan fluorescence quenching. Nucleic Acids Res. 2014 42 2736 2749 4JRK 24288369 Crystal Structure of Escherichia coli Hfq Surface Mutant 2013-03-21 2013-12-11 Robinson, K.E.,Orans, J.,Kovach, A.R.,Link, T.M.,Brennan, R.G. Mapping Hfq-RNA interaction surfaces using tryptophan fluorescence quenching. Nucleic Acids Res. 2014 42 2736 2749 4JUV 24288369 Crystal Structure of Escherichia coli Hfq Distal Face 1 Mutant 2013-03-25 2013-12-11 Robinson, K.E.,Orans, J.,Kovach, A.R.,Link, T.M.,Brennan, R.G. Mapping Hfq-RNA interaction surfaces using tryptophan fluorescence quenching. Nucleic Acids Res. 2014 42 2736 2749 4L12 24311573 Crystal structure of EGFP-based Calcium Sensor CatchER complexed with Gd 2013-06-01 2013-12-11 Zhang, Y.,Reddish, F.,Tang, S.,Zhuo, Y.,Wang, Y.F.,Yang, J.J.,Weber, I.T. Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics. Acta Crystallogr.,Sect.D 2013 69 2309 2319 4LT5 24390346 Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNA 2013-07-23 2013-12-18 Hashimoto, H.,Pais, J.E.,Zhang, X.,Saleh, L.,Fu, Z.Q.,Dai, N.,Correa, I.R.,Zheng, Y.,Cheng, X. Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNA. Nature 2014 506 391 395 4LTW 24260475 Ancestral Ketosteroid Receptor-Progesterone-Mifepristone Complex 2013-07-24 2013-12-25 Colucci, J.K.,Ortlund, E.A. X-ray crystal structure of the ancestral 3-ketosteroid receptor-progesterone-mifepristone complex shows mifepristone bound at the coactivator binding interface. Plos One 2013 8 0 0 4L9P 24347326 Crystal structure of Aspergillus fumigatus protein farnesyltransferase complexed with the FII analog, FPT-II, and the KCVVM peptide 2013-06-18 2014-01-01 Mabanglo, M.F.,Hast, M.A.,Lubock, N.B.,Hellinga, H.W.,Beese, L.S. Crystal structures of the fungal pathogen Aspergillus fumigatus protein farnesyltransferase complexed with substrates and inhibitors reveal features for antifungal drug design. Protein Sci. 2014 23 289 301 4LNB 24347326 Aspergillus fumigatus protein farnesyltransferase ternary complex with farnesyldiphosphate and ethylenediamine scaffold inhibitor 5 2013-07-11 2014-01-01 Mabanglo, M.F.,Hast, M.A.,Lubock, N.B.,Hellinga, H.W.,Beese, L.S. Crystal structures of the fungal pathogen Aspergillus fumigatus protein farnesyltransferase complexed with substrates and inhibitors reveal features for antifungal drug design. Protein Sci. 2014 23 289 301 4LNG 24347326 Aspergillus fumigatus protein farnesyltransferase complex with farnesyldiphosphate and tipifarnib 2013-07-11 2014-01-01 Mabanglo, M.F.,Hast, M.A.,Lubock, N.B.,Hellinga, H.W.,Beese, L.S. Crystal structures of the fungal pathogen Aspergillus fumigatus protein farnesyltransferase complexed with substrates and inhibitors reveal features for antifungal drug design. Protein Sci. 2014 23 289 301 4MBG 24347326 Crystal structure of Aspergillus fumigatus protein farnesyltransferase binary complex with farnesyldiphosphate 2013-08-19 2014-01-01 Mabanglo, M.F.,Hast, M.A.,Lubock, N.B.,Hellinga, H.W.,Beese, L.S. Crystal structures of the fungal pathogen Aspergillus fumigatus protein farnesyltransferase complexed with substrates and inhibitors reveal features for antifungal drug design. Protein Sci. 2014 23 289 301 4NRZ 24335316 Crystal Structure of HIV-1 Neutralizing Antibody m66.6 2013-11-27 2014-02-05 Ofek, G.,Zirkle, B.,Yang, Y.,Zhu, Z.,McKee, K.,Zhang, B.,Chuang, G.Y.,Georgiev, I.S.,O'Dell, S.,Doria-Rose, N.,Mascola, J.R.,Dimitrov, D.S.,Kwong, P.D. Structural Basis for HIV-1 Neutralization by 2F5-Like Antibodies m66 and m66.6. J.Virol. 2014 88 2426 2441 4M9E 24520114 Structure of Klf4 zinc finger DNA binding domain in complex with methylated DNA 2013-08-14 2014-02-12 Liu, Y.,Olanrewaju, Y.O.,Zheng, Y.,Hashimoto, H.,Blumenthal, R.M.,Zhang, X.,Cheng, X. Structural basis for Klf4 recognition of methylated DNA. Nucleic Acids Res. 2014 42 4859 4867 4KU1 24522230 Role of the hinge and C-gamma-2/C-gamma-3 interface in immunoglobin G1 Fc domain motions: implications for Fc engineering 2013-05-21 2014-02-19 Frank, M.,Walker, R.C.,Lanzilotta, W.N.,Prestegard, J.H.,Barb, A.W. Immunoglobulin g1 fc domain motions: implications for fc engineering. J.Mol.Biol. 2014 426 1799 1811 4KPI 24419376 Rotational order-disorder structure of reversibly photoswitchable red fluorescent protein rsTagRFP 2013-05-13 2014-02-26 Pletnev, S.,Subach, F.V.,Verkhusha, V.V.,Dauter, Z. The rotational order-disorder structure of the reversibly photoswitchable red fluorescent protein rsTagRFP. Acta Crystallogr.,Sect.D 2014 70 31 39 4LLX 24375910 Crystal structure of PDE10A2 with fragment ZT434 2013-07-09 2014-02-26 Recht, M.I.,Sridhar, V.,Badger, J.,Bounaud, P.Y.,Logan, C.,Chie-Leon, B.,Nienaber, V.,Torres, F.E. Identification and Optimization of PDE10A Inhibitors Using Fragment-Based Screening by Nanocalorimetry and X-ray Crystallography. J Biomol Screen 2014 19 497 507 4N3E 24531481 Crystal structure of Hyp-1, a St John's wort PR-10 protein, in complex with 8-anilino-1-naphthalene sulfonate (ANS) 2013-10-07 2014-02-26 Sliwiak, J.,Jaskolski, M.,Dauter, Z.,McCoy, A.J.,Read, R.J. Likelihood-based molecular-replacement solution for a highly pathological crystal with tetartohedral twinning and sevenfold translational noncrystallographic symmetry. Acta Crystallogr.,Sect.D 2014 70 471 480 4OCR 24590074 Crystal structure of human Fab CAP256-VRC26.01, a potent V1V2-directed HIV-1 neutralizing antibody 2014-01-09 2014-02-26 Doria-Rose, N.A.,Schramm, C.A.,Gorman, J.,Moore, P.L.,Bhiman, J.N.,Dekosky, B.J.,Ernandes, M.J.,Georgiev, I.S.,Kim, H.J.,Pancera, M.,Staupe, R.P.,Altae-Tran, H.R.,Bailer, R.T.,Crooks, E.T.,Cupo, A.,Druz, A.,Garrett, N.J.,Hoi, K.H.,Kong, R.,Louder, M.K.,Longo, N.S.,McKee, K.,Nonyane, M.,O'Dell, S.,Roark, R.S.,Rudicell, R.S.,Schmidt, S.D.,Sheward, D.J.,Soto, C.,Wibmer, C.K.,Yang, Y.,Zhang, Z.,Sequencing, Nisc Comparative,Mullikin, J.C.,Binley, J.M.,Sanders, R.W.,Wilson, I.A.,Moore, J.P.,Ward, A.B.,Georgiou, G.,Williamson, C.,Abdool Karim, S.S.,Morris, L.,Kwong, P.D.,Shapiro, L.,Mascola, J.R. Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies. Nature 2014 509 55 62 4OCS 24590074 Crystal structure of human Fab CAP256-VRC26.10, a potent V1V2-directed HIV-1 neutralizing antibody 2014-01-09 2014-02-26 Doria-Rose, N.A.,Schramm, C.A.,Gorman, J.,Moore, P.L.,Bhiman, J.N.,Dekosky, B.J.,Ernandes, M.J.,Georgiev, I.S.,Kim, H.J.,Pancera, M.,Staupe, R.P.,Altae-Tran, H.R.,Bailer, R.T.,Crooks, E.T.,Cupo, A.,Druz, A.,Garrett, N.J.,Hoi, K.H.,Kong, R.,Louder, M.K.,Longo, N.S.,McKee, K.,Nonyane, M.,O'Dell, S.,Roark, R.S.,Rudicell, R.S.,Schmidt, S.D.,Sheward, D.J.,Soto, C.,Wibmer, C.K.,Yang, Y.,Zhang, Z.,Sequencing, Nisc Comparative,Mullikin, J.C.,Binley, J.M.,Sanders, R.W.,Wilson, I.A.,Moore, J.P.,Ward, A.B.,Georgiou, G.,Williamson, C.,Abdool Karim, S.S.,Morris, L.,Kwong, P.D.,Shapiro, L.,Mascola, J.R. Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies. Nature 2014 509 55 62 4OCW 24590074 Crystal structure of human Fab CAP256-VRC26.06, a potent V1V2-directed HIV-1 neutralizing antibody 2014-01-09 2014-02-26 Doria-Rose, N.A.,Schramm, C.A.,Gorman, J.,Moore, P.L.,Bhiman, J.N.,Dekosky, B.J.,Ernandes, M.J.,Georgiev, I.S.,Kim, H.J.,Pancera, M.,Staupe, R.P.,Altae-Tran, H.R.,Bailer, R.T.,Crooks, E.T.,Cupo, A.,Druz, A.,Garrett, N.J.,Hoi, K.H.,Kong, R.,Louder, M.K.,Longo, N.S.,McKee, K.,Nonyane, M.,O'Dell, S.,Roark, R.S.,Rudicell, R.S.,Schmidt, S.D.,Sheward, D.J.,Soto, C.,Wibmer, C.K.,Yang, Y.,Zhang, Z.,Sequencing, Nisc Comparative,Mullikin, J.C.,Binley, J.M.,Sanders, R.W.,Wilson, I.A.,Moore, J.P.,Ward, A.B.,Georgiou, G.,Williamson, C.,Abdool Karim, S.S.,Morris, L.,Kwong, P.D.,Shapiro, L.,Mascola, J.R. Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies. Nature 2014 509 55 62 4OD1 24590074 Crystal structure of human Fab CAP256-VRC26.03, a potent V1V2-directed HIV-1 neutralizing antibody 2014-01-09 2014-02-26 Doria-Rose, N.A.,Schramm, C.A.,Gorman, J.,Moore, P.L.,Bhiman, J.N.,Dekosky, B.J.,Ernandes, M.J.,Georgiev, I.S.,Kim, H.J.,Pancera, M.,Staupe, R.P.,Altae-Tran, H.R.,Bailer, R.T.,Crooks, E.T.,Cupo, A.,Druz, A.,Garrett, N.J.,Hoi, K.H.,Kong, R.,Louder, M.K.,Longo, N.S.,McKee, K.,Nonyane, M.,O'Dell, S.,Roark, R.S.,Rudicell, R.S.,Schmidt, S.D.,Sheward, D.J.,Soto, C.,Wibmer, C.K.,Yang, Y.,Zhang, Z.,Sequencing, Nisc Comparative,Mullikin, J.C.,Binley, J.M.,Sanders, R.W.,Wilson, I.A.,Moore, J.P.,Ward, A.B.,Georgiou, G.,Williamson, C.,Abdool Karim, S.S.,Morris, L.,Kwong, P.D.,Shapiro, L.,Mascola, J.R. Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies. Nature 2014 509 55 62 4ODH 24590074 Crystal structure of human Fab CAP256-VRC26.UCA, a potent V1V2-directed HIV-1 neutralizing antibody 2014-01-10 2014-02-26 Doria-Rose, N.A.,Schramm, C.A.,Gorman, J.,Moore, P.L.,Bhiman, J.N.,Dekosky, B.J.,Ernandes, M.J.,Georgiev, I.S.,Kim, H.J.,Pancera, M.,Staupe, R.P.,Altae-Tran, H.R.,Bailer, R.T.,Crooks, E.T.,Cupo, A.,Druz, A.,Garrett, N.J.,Hoi, K.H.,Kong, R.,Louder, M.K.,Longo, N.S.,McKee, K.,Nonyane, M.,O'Dell, S.,Roark, R.S.,Rudicell, R.S.,Schmidt, S.D.,Sheward, D.J.,Soto, C.,Wibmer, C.K.,Yang, Y.,Zhang, Z.,Sequencing, Nisc Comparative,Mullikin, J.C.,Binley, J.M.,Sanders, R.W.,Wilson, I.A.,Moore, J.P.,Ward, A.B.,Georgiou, G.,Williamson, C.,Abdool Karim, S.S.,Morris, L.,Kwong, P.D.,Shapiro, L.,Mascola, J.R. Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies. Nature 2014 509 55 62 4ORG 24590074 Crystal structure of human Fab CAP256-VRC26.04, a potent V1V2-directed HIV-1 neutralizing antibody 2014-02-11 2014-02-26 Doria-Rose, N.A.,Schramm, C.A.,Gorman, J.,Moore, P.L.,Bhiman, J.N.,Dekosky, B.J.,Ernandes, M.J.,Georgiev, I.S.,Kim, H.J.,Pancera, M.,Staupe, R.P.,Altae-Tran, H.R.,Bailer, R.T.,Crooks, E.T.,Cupo, A.,Druz, A.,Garrett, N.J.,Hoi, K.H.,Kong, R.,Louder, M.K.,Longo, N.S.,McKee, K.,Nonyane, M.,O'Dell, S.,Roark, R.S.,Rudicell, R.S.,Schmidt, S.D.,Sheward, D.J.,Soto, C.,Wibmer, C.K.,Yang, Y.,Zhang, Z.,Sequencing, Nisc Comparative,Mullikin, J.C.,Binley, J.M.,Sanders, R.W.,Wilson, I.A.,Moore, J.P.,Ward, A.B.,Georgiou, G.,Williamson, C.,Abdool Karim, S.S.,Morris, L.,Kwong, P.D.,Shapiro, L.,Mascola, J.R. Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies. Nature 2014 509 55 62 4O6G 24699730 Rv3902c from M. tuberculosis 2013-12-20 2014-03-05 Reddy, B.G.,Moates, D.B.,Kim, H.B.,Green, T.J.,Kim, C.Y.,Terwilliger, T.C.,Delucas, L.J. 1.55 angstrom resolution X-ray crystal structure of Rv3902c from Mycobacterium tuberculosis. Acta Crystallogr F Struct Biol 2014 70 414 417 4O74 24568369 Crystal structure of the first bromodomain of human BRD4 in complex with BI 2536 2013-12-24 2014-03-05 Ember, S.W.,Zhu, J.Y.,Olesen, S.H.,Martin, M.P.,Becker, A.,Berndt, N.,Georg, G.I.,Schonbrunn, E. Acetyl-lysine Binding Site of Bromodomain-Containing Protein 4 (BRD4) Interacts with Diverse Kinase Inhibitors. Acs Chem.Biol. 2014 9 1160 1171 4O75 24568369 Crystal structure of the first bromodomain of human BRD4 in complex with FOSTAMATINIB 2013-12-24 2014-03-05 Ember, S.W.,Zhu, J.Y.,Olesen, S.H.,Martin, M.P.,Becker, A.,Berndt, N.,Georg, G.I.,Schonbrunn, E. Acetyl-lysine Binding Site of Bromodomain-Containing Protein 4 (BRD4) Interacts with Diverse Kinase Inhibitors. Acs Chem.Biol. 2014 9 1160 1171 4O76 24568369 Crystal structure of the first bromodomain of human BRD4 in complex with TG101209 2013-12-24 2014-03-05 Ember, S.W.,Zhu, J.Y.,Olesen, S.H.,Martin, M.P.,Becker, A.,Berndt, N.,Georg, G.I.,Schonbrunn, E. Acetyl-lysine Binding Site of Bromodomain-Containing Protein 4 (BRD4) Interacts with Diverse Kinase Inhibitors. Acs Chem.Biol. 2014 9 1160 1171 4O78 24568369 Crystal structure of the first bromodomain of human BRD4 in complex with GW612286X 2013-12-24 2014-03-05 Ember, S.W.,Zhu, J.Y.,Olesen, S.H.,Martin, M.P.,Becker, A.,Berndt, N.,Georg, G.I.,Schonbrunn, E. Acetyl-lysine Binding Site of Bromodomain-Containing Protein 4 (BRD4) Interacts with Diverse Kinase Inhibitors. Acs Chem.Biol. 2014 9 1160 1171 4O7A 24568369 Crystal structure of the first bromodomain of human BRD4 in complex with SB-409514 2013-12-24 2014-03-05 Ember, S.W.,Zhu, J.Y.,Olesen, S.H.,Martin, M.P.,Becker, A.,Berndt, N.,Georg, G.I.,Schonbrunn, E. Acetyl-lysine Binding Site of Bromodomain-Containing Protein 4 (BRD4) Interacts with Diverse Kinase Inhibitors. Acs Chem.Biol. 2014 9 1160 1171 4O7B 24568369 Crystal structure of the first bromodomain of human BRD4 in complex with SB-284847-BT 2013-12-24 2014-03-05 Ember, S.W.,Zhu, J.Y.,Olesen, S.H.,Martin, M.P.,Becker, A.,Berndt, N.,Georg, G.I.,Schonbrunn, E. Acetyl-lysine Binding Site of Bromodomain-Containing Protein 4 (BRD4) Interacts with Diverse Kinase Inhibitors. Acs Chem.Biol. 2014 9 1160 1171 4O7C 24568369 Crystal structure of the first bromodomain of human BRD4 in complex with SB-614067-R 2013-12-24 2014-03-05 Ember, S.W.,Zhu, J.Y.,Olesen, S.H.,Martin, M.P.,Becker, A.,Berndt, N.,Georg, G.I.,Schonbrunn, E. Acetyl-lysine Binding Site of Bromodomain-Containing Protein 4 (BRD4) Interacts with Diverse Kinase Inhibitors. Acs Chem.Biol. 2014 9 1160 1171 4O7E 24568369 Crystal structure of the first bromodomain of human BRD4 in complex with SB-610251-B 2013-12-24 2014-03-05 Ember, S.W.,Zhu, J.Y.,Olesen, S.H.,Martin, M.P.,Becker, A.,Berndt, N.,Georg, G.I.,Schonbrunn, E. Acetyl-lysine Binding Site of Bromodomain-Containing Protein 4 (BRD4) Interacts with Diverse Kinase Inhibitors. Acs Chem.Biol. 2014 9 1160 1171 4O7F 24568369 Crystal structure of the first bromodomain of human BRD4 in complex with SB-251527 2013-12-24 2014-03-05 Ember, S.W.,Zhu, J.Y.,Olesen, S.H.,Martin, M.P.,Becker, A.,Berndt, N.,Georg, G.I.,Schonbrunn, E. Acetyl-lysine Binding Site of Bromodomain-Containing Protein 4 (BRD4) Interacts with Diverse Kinase Inhibitors. Acs Chem.Biol. 2014 9 1160 1171 4OSY 23601642 STRUCTURE of FULLY-CLEAVED GLYCINE-BOUND HUMAN L-ASPARAGINASE PROTEIN 2014-02-13 2014-03-05 Su, Y.,Karamitros, C.S.,Nomme, J.,McSorley, T.,Konrad, M.,Lavie, A. Free glycine accelerates the autoproteolytic activation of human asparaginase. Chem.Biol. 2013 20 533 540 4LQE 24501097 Crystal Structure of MepB 2013-07-17 2014-03-12 Agah, S.,Poulos, S.,Banchs, C.,Faham, S. Structural characterization of MepB from Staphylococcus aureus reveals homology to endonucleases. Protein Sci. 2014 23 594 602 4NDZ Structure of Maltose Binding Protein fusion to 2-O-Sulfotransferase with bound heptasaccharide and PAP 2013-10-28 2014-03-19 Liu, C.,Sheng, J.,Krahn, J.M.,Perera, L.,Xu, Y.,Hsieh, P.,Liu, J.,Pedersen, L.C. Deciphering the role of 2-O-sulfotransferase in regulating heparan sulfate biosynthesis To be Published 0 0 0 0 4OC8 24604015 DNA modification-dependent restriction endonuclease AspBHI 2014-01-08 2014-03-19 Horton, J.R.,Nugent, R.L.,Li, A.,Mabuchi, M.Y.,Fomenkov, A.,Cohen-Karni, D.,Griggs, R.M.,Zhang, X.,Wilson, G.G.,Zheng, Y.,Xu, S.Y.,Cheng, X. Structure and mutagenesis of the DNA modification-dependent restriction endonuclease AspBHI. Sci Rep 2014 4 4246 4246 4HNW The NatA Acetyltransferase Complex Bound To Inositol Hexakisphosphate 2012-10-21 2014-03-26 Neubauer, J.L.,Pham, T.,Immormino, R.M.,Dollins, D.E.,Endo-Streeter, S.T.,Li, S.,Pemble IV, C.W.,York, J.D. The Protein Complex NatA Binds Inositol Hexakisphosphate and Exhibits Conformational Flexibility To be Published 0 0 0 0 4HNW The NatA Acetyltransferase Complex Bound To Inositol Hexakisphosphate 2012-10-21 2014-03-26 Neubauer, J.L.,Pham, T.,Immormino, R.M.,Dollins, D.E.,Endo-Streeter, S.T.,Li, S.,Pemble IV, C.W.,York, J.D. The Protein Complex NatA Binds Inositol Hexakisphosphate and Exhibits Conformational Flexibility To be Published 0 0 0 0 4HNX The NatA Acetyltransferase Complex Bound To ppGpp 2012-10-21 2014-03-26 Neubauer, J.L.,Pham, T.,Immormino, R.M.,Dollins, D.E.,Endo-Streeter, S.T.,Li, S.,Pemble IV, C.W.,York, J.D. The Protein Complex NatA Binds Inositol Hexakisphosphate and Exhibits Conformational Flexibility To be Published 0 0 0 0 4HNY Apo N-terminal acetyltransferase complex A 2012-10-21 2014-03-26 Neubauer, J.L.,Pham, T.,Immormino, R.M.,Dollins, D.E.,Endo-Streeter, S.T.,Li, S.,Pemble IV, C.W.,York, J.D. The Protein Complex NatA Binds Inositol Hexakisphosphate and Exhibits Conformational Flexibility To be Published 0 0 0 0 4M5J 24613625 The Identification, Analysis and Structure-Based Development of Novel Inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase 2013-08-08 2014-04-02 Yun, M.K.,Hoagland, D.,Kumar, G.,Waddell, M.B.,Rock, C.O.,Lee, R.E.,White, S.W. The identification, analysis and structure-based development of novel inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase. Bioorg.Med.Chem. 2014 22 2157 2165 4M5N 24613625 The Identification, Analysis and Structure-Based Development of Novel Inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase 2013-08-08 2014-04-02 Yun, M.K.,Hoagland, D.,Kumar, G.,Waddell, M.B.,Rock, C.O.,Lee, R.E.,White, S.W. The identification, analysis and structure-based development of novel inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase. Bioorg.Med.Chem. 2014 22 2157 2165 4NZN 24768307 Crystal structure of the catalytic domain of PPIP5K2 in complex with AMPPNP and 2-O-BN-5-PA-INSP4 2013-12-12 2014-04-02 Wang, H.,Godage, H.Y.,Riley, A.M.,Weaver, J.D.,Shears, S.B.,Potter, B.V. Synthetic Inositol Phosphate Analogs Reveal that PPIP5K2 Has a Surface-Mounted Substrate Capture Site that Is a Target for Drug Discovery. Chem.Biol. 2014 21 689 699 4NZO 24768307 Crystal structure of the catalytic domain of PPIP5K2 in complex with AMPPNP and 2,5-DI-O-BN-INSP4 2013-12-12 2014-04-02 Wang, H.,Godage, H.Y.,Riley, A.M.,Weaver, J.D.,Shears, S.B.,Potter, B.V. Synthetic Inositol Phosphate Analogs Reveal that PPIP5K2 Has a Surface-Mounted Substrate Capture Site that Is a Target for Drug Discovery. Chem.Biol. 2014 21 689 699 4KW4 Crystal Structure of Green Fluorescent Protein 2013-05-23 2014-04-09 Barnard, T.J.,Yu, X.,Noinaj, N.,Taraska, J.W. Crystal Structure of Green Fluorescent Protein To be Published 0 0 0 0 4KW9 Crystal Structure of Green Fluorescent Protein 2013-05-23 2014-04-09 Barnard, T.J.,Yu, X.,Noinaj, N.,Taraska, J.W. Crystal Structure of Green Fluorescent Protein To be Published 0 0 0 0 3TLD 23519792 Crystal Structure of Y29F mutant of Vitreoscilla hemoglobin 2011-08-29 2014-04-16 Ratakonda, S.,Anand, A.,Dikshit, K.,Stark, B.C.,Howard, A.J. Crystallographic structure determination of B10 mutants of Vitreoscilla hemoglobin: role of Tyr29 (B10) in the structure of the ligand-binding site. Acta Crystallogr.,Sect.F 2013 69 215 222 3TM3 23519792 Wild-type hemoglobin from Vitreoscilla stercoraria 2011-08-31 2014-04-16 Ratakonda, S.,Anand, A.,Dikshit, K.,Stark, B.C.,Howard, A.J. Crystallographic structure determination of B10 mutants of Vitreoscilla hemoglobin: role of Tyr29 (B10) in the structure of the ligand-binding site. Acta Crystallogr.,Sect.F 2013 69 215 222 3TM9 23519792 Y29A mutant of Vitreoscilla stercoraria hemoglobin 2011-08-31 2014-04-16 Ratakonda, S.,Anand, A.,Dikshit, K.,Stark, B.C.,Howard, A.J. Crystallographic structure determination of B10 mutants of Vitreoscilla hemoglobin: role of Tyr29 (B10) in the structure of the ligand-binding site. Acta Crystallogr.,Sect.F 2013 69 215 222 4N72 24742683 Catalytic domain from dihydrolipoamide acetyltransferase of pyruvate dehydrogenase from Escherichia coli 2013-10-14 2014-04-23 Wang, J.,Nemeria, N.S.,Chandrasekhar, K.,Kumaran, S.,Arjunan, P.,Reynolds, S.,Calero, G.,Brukh, R.,Kakalis, L.,Furey, W.,Jordan, F. Structure and Function of the Catalytic Domain of the Dihydrolipoyl Acetyltransferase Component in Escherichia coli Pyruvate Dehydrogenase Complex. J.Biol.Chem. 2014 289 15215 15230 4O1V 24656772 SPOP Promotes Tumorigenesis by Acting as a Key Regulatory Hub in Kidney Cancer 2013-12-16 2014-04-30 Li, G.,Ci, W.,Karmakar, S.,Chen, K.,Dhar, R.,Fan, Z.,Guo, Z.,Zhang, J.,Ke, Y.,Wang, L.,Zhuang, M.,Hu, S.,Li, X.,Zhou, L.,Li, X.,Calabrese, M.F.,Watson, E.R.,Prasad, S.M.,Rinker-Schaeffer, C.,Eggener, S.E.,Stricker, T.,Tian, Y.,Schulman, B.A.,Liu, J.,White, K.P. SPOP Promotes Tumorigenesis by Acting as a Key Regulatory Hub in Kidney Cancer. Cancer Cell 2014 25 455 468 4OI8 24081950 RAGE is a nucleic acid receptor that promotes inflammatory responses to DNA. 2014-01-19 2014-04-30 Sirois, C.M.,Jin, T.,Miller, A.L.,Bertheloot, D.,Nakamura, H.,Horvath, G.L.,Mian, A.,Jiang, J.,Schrum, J.,Bossaller, L.,Pelka, K.,Garbi, N.,Brewah, Y.,Tian, J.,Chang, C.,Chowdhury, P.S.,Sims, G.P.,Kolbeck, R.,Coyle, A.J.,Humbles, A.A.,Xiao, T.S.,Latz, E. RAGE is a nucleic acid receptor that promotes inflammatory responses to DNA. J.Exp.Med. 2013 210 2447 2463 4KLA E343D variant of human ferrochelatase 2013-05-07 2014-05-07 Lanzilotta, W.N.,Medlock, A.E. E343D variant of human ferrochelatase To be Published 0 0 0 0 4KMM M76H variant of human ferrochelatase 2013-05-08 2014-05-14 Lanzilotta, W.N.,Medlock, A.E. M76H variant of human ferrochelatase To be Published 0 0 0 0 4I1W 25565451 2.00 Angstroms X-ray crystal structure of NAD- bound 2-aminomuconate 6-semialdehyde dehydrogenase from Pseudomonas fluorescens 2012-11-21 2014-05-21 Huo, L.,Davis, I.,Liu, F.,Andi, B.,Esaki, S.,Iwaki, H.,Hasegawa, Y.,Orville, A.M.,Liu, A. Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action. Nat Commun 2015 6 5935 5935 4OC1 24731280 X-ray structure of of human glutamate carboxypeptidase II (GCPII) in a complex with COIBzL, a urea-based inhibitor (2S)-2-[({(1S)-1-carboxy-2-[(2S)-oxiran-2-yl]ethyl}carbamoyl)amino]-6-[(4-iodobenzoyl)amino]hexanoic acid 2014-01-08 2014-05-21 Pavlicek, J.,Ptacek, J.,Cerny, J.,Byun, Y.,Skultetyova, L.,Pomper, M.G.,Lubkowski, J.,Barinka, C. Structural characterization of P1'-diversified urea-based inhibitors of glutamate carboxypeptidase II. Bioorg.Med.Chem.Lett. 2014 24 2340 2345 4OC2 24731280 X-ray structure of of human glutamate carboxypeptidase II (GCPII) in a complex with CEIBzL, a urea-based inhibitor N~2~-{[(1S)-1-carboxybut-3-yn-1-yl]carbamoyl}-N~6~-(4-iodobenzoyl)-L-lysine 2014-01-08 2014-05-21 Pavlicek, J.,Ptacek, J.,Cerny, J.,Byun, Y.,Skultetyova, L.,Pomper, M.G.,Lubkowski, J.,Barinka, C. Structural characterization of P1'-diversified urea-based inhibitors of glutamate carboxypeptidase II. Bioorg.Med.Chem.Lett. 2014 24 2340 2345 4OC4 24731280 X-ray structure of of human glutamate carboxypeptidase II (GCPII) in a complex with CPIBzL, a urea-based inhibitor N~2~-{[(1S)-1-carboxy-2-(pyridin-4-yl)ethyl]carbamoyl}-N~6~-(4-iodobenzoyl)-L-lysine 2014-01-08 2014-05-21 Pavlicek, J.,Ptacek, J.,Cerny, J.,Byun, Y.,Skultetyova, L.,Pomper, M.G.,Lubkowski, J.,Barinka, C. Structural characterization of P1'-diversified urea-based inhibitors of glutamate carboxypeptidase II. Bioorg.Med.Chem.Lett. 2014 24 2340 2345 4KLC E343D/F110A Double mutant of human ferrochelatase 2013-05-07 2014-06-18 Lanzilotta, W.N.,Medlock, A.E. E343D/F110A Double mutant of human ferrochelatase To be Published 0 0 0 0 4KLR E343Q variant of human ferrochelatase 2013-05-07 2014-06-18 Lanzilotta, W.N.,Medlock, A.E. E343Q variant of human ferrochelatase To be Published 0 0 0 0 4MCP 24863754 A high resolution structure of human glutamate carboxypeptidase II (GCPII) in complex with folyl-gamma-L-glutamic acid (pteroyldi-gamma-L-glutamic acid) 2013-08-21 2014-06-18 Navratil, M.,Ptacek, J.,Sacha, P.,Starkova, J.,Lubkowski, J.,Barinka, C.,Konvalinka, J. Structural and biochemical characterization of the folyl-poly-gamma-l-glutamate hydrolyzing activity of human glutamate carboxypeptidase II. Febs J. 2014 281 3228 3242 4MCR 24863754 A high resolution structure of human glutamate carboxypeptidase II (GCPII) in complex with folyltri-gamma-L-glutamic acid (pteroyltetra-gamma-L-glutamic acid) 2013-08-21 2014-06-18 Navratil, M.,Ptacek, J.,Sacha, P.,Starkova, J.,Lubkowski, J.,Barinka, C.,Konvalinka, J. Structural and biochemical characterization of the folyl-poly-gamma-l-glutamate hydrolyzing activity of human glutamate carboxypeptidase II. Febs J. 2014 281 3228 3242 4O4B 24956979 Crystal Structure of an Inositol hexakisphosphate kinase EhIP6KA as a fusion protein with maltose binding protein 2013-12-18 2014-06-18 Wang, H.,DeRose, E.F.,London, R.E.,Shears, S.B. IP6K structure and the molecular determinants of catalytic specificity in an inositol phosphate kinase family. Nat Commun 2014 5 4178 4178 4PQK 24927575 C-Terminal domain of DNA binding protein 2014-03-03 2014-06-18 Schumacher, M.A.,Tonthat, N.K.,Kwong, S.M.,Chinnam, N.B.,Liu, M.A.,Skurray, R.A.,Firth, N. Mechanism of staphylococcal multiresistance plasmid replication origin assembly by the RepA protein. Proc.Natl.Acad.Sci.USA 2014 111 9121 9126 4N7V 24997597 Crystal structure of human Plk4 cryptic polo box (CPB) in complex with a Cep152 N-terminal fragment 2013-10-16 2014-07-02 Park, S.Y.,Park, J.E.,Kim, T.S.,Kim, J.H.,Kwak, M.J.,Ku, B.,Tian, L.,Murugan, R.N.,Ahn, M.,Komiya, S.,Hojo, H.,Kim, N.H.,Kim, B.Y.,Bang, J.K.,Erikson, R.L.,Lee, K.W.,Kim, S.J.,Oh, B.H.,Yang, W.,Lee, K.S. Molecular basis for unidirectional scaffold switching of human Plk4 in centriole biogenesis. Nat.Struct.Mol.Biol. 2014 21 696 703 4N7Z 24997597 Crystal structure of human Plk4 cryptic polo box (CPB) in complex with a Cep192 N-terminal fragment 2013-10-16 2014-07-02 Park, S.Y.,Park, J.E.,Kim, T.S.,Kim, J.H.,Kwak, M.J.,Ku, B.,Tian, L.,Murugan, R.N.,Ahn, M.,Komiya, S.,Hojo, H.,Kim, N.H.,Kim, B.Y.,Bang, J.K.,Erikson, R.L.,Lee, K.W.,Kim, S.J.,Oh, B.H.,Yang, W.,Lee, K.S. Molecular basis for unidirectional scaffold switching of human Plk4 in centriole biogenesis. Nat.Struct.Mol.Biol. 2014 21 696 703 4Q8E 24927576 Human DNA polymerase eta inserting dCMPNPP opposite a phenanthriplatin adducted G 2014-04-26 2014-07-02 Gregory, M.T.,Park, G.Y.,Johnstone, T.C.,Lee, Y.S.,Yang, W.,Lippard, S.J. Structural and mechanistic studies of polymerase eta bypass of phenanthriplatin DNA damage. Proc.Natl.Acad.Sci.USA 2014 111 9133 9138 4Q8F 24927576 Human DNA polymerase eta extending primer immediately after a phenanthriplatin adducted G 2014-04-26 2014-07-02 Gregory, M.T.,Park, G.Y.,Johnstone, T.C.,Lee, Y.S.,Yang, W.,Lippard, S.J. Structural and mechanistic studies of polymerase eta bypass of phenanthriplatin DNA damage. Proc.Natl.Acad.Sci.USA 2014 111 9133 9138 4QMI 24966168 The XMAP215 family drives microtubule polymerization using a structurally diverse TOG array 2014-06-16 2014-07-09 Fox, J.C.,Howard, A.E.,Currie, J.D.,Rogers, S.L.,Slep, K.C. The XMAP215 family drives microtubule polymerization using a structurally diverse TOG array. Mol.Biol.Cell 2014 25 2375 2392 4Q4K 25002579 Crystal structure of nitronate monooxygenase from Pseudomonas aeruginosa PAO1 2014-04-14 2014-07-16 Salvi, F.,Agniswamy, J.,Yuan, H.,Vercammen, K.,Pelicaen, R.,Cornelis, P.,Spain, J.C.,Weber, I.T.,Gadda, G. The Combined Structural and Kinetic Characterization of a Bacterial Nitronate Monooxygenase from Pseudomonas aeruginosa PAO1 Establishes NMO Class I and II. J.Biol.Chem. 2014 289 23764 23775 4TUX 25002523 drosophila stem-loop binding protein complexed with histone mRNA stem-loop 2014-06-25 2014-07-16 Zhang, J.,Tan, D.,DeRose, E.F.,Perera, L.,Dominski, Z.,Marzluff, W.F.,Tong, L.,Hall, T.M. Molecular mechanisms for the regulation of histone mRNA stem-loop-binding protein by phosphorylation. Proc.Natl.Acad.Sci.USA 2014 111 0 0 4Q6I 24990883 Crystal structure of murine 2D5 Fab, a potent anti-CD4 HIV-1-neutralizing antibody in complex with CD4 2014-04-22 2014-07-23 Pegu, A.,Yang, Z.Y.,Boyington, J.C.,Wu, L.,Ko, S.Y.,Schmidt, S.D.,McKee, K.,Kong, W.P.,Shi, W.,Chen, X.,Todd, J.P.,Letvin, N.L.,Huang, J.,Nason, M.C.,Hoxie, J.A.,Kwong, P.D.,Connors, M.,Rao, S.S.,Mascola, J.R.,Nabel, G.J. Neutralizing antibodies to HIV-1 envelope protect more effectively in vivo than those to the CD4 receptor. Sci Transl Med 2014 6 0 0 4TUW 25002523 drosophila stem-loop binding protein complexed with histone mRNA stem-loop, phospho mimic of TPNK and C-terminal region 2014-06-25 2014-07-23 Zhang, J.,Tan, D.,DeRose, E.F.,Perera, L.,Dominski, Z.,Marzluff, W.F.,Tong, L.,Hall, T.M. Molecular mechanisms for the regulation of histone mRNA stem-loop-binding protein by phosphorylation. Proc.Natl.Acad.Sci.USA 2014 111 0 0 4U5W 25122770 Crystal Structure of HIV-1 Nef-SF2 Core Domain in Complex with the Src Family Kinase Hck SH3-SH2 Tandem Regulatory Domains 2014-07-25 2014-08-20 Alvarado, J.J.,Tarafdar, S.,Yeh, J.I.,Smithgall, T.E. Interaction with the Src Homology (SH3-SH2) Region of the Src-family Kinase Hck Structures the HIV-1 Nef Dimer for Kinase Activation and Effector Recruitment. J.Biol.Chem. 2014 289 28539 28553 4NCD 25122114 Crystal Structure of Class 5 Fimbriae Chaperone CfaA 2013-10-24 2014-08-27 Bao, R.,Fordyce, A.,Chen, Y.X.,McVeigh, A.,Savarino, S.J.,Xia, D. Structure of CfaA Suggests a New Family of Chaperones Essential for Assembly of Class 5 Fimbriae. Plos Pathog. 2014 10 0 0 4OLZ 25142607 Crystal structure of antibody VRC07-G54W in complex with clade A/E 93TH057 HIV-1 gp120 core 2014-01-25 2014-09-03 Rudicell, R.S.,Kwon, Y.D.,Ko, S.Y.,Pegu, A.,Louder, M.K.,Georgiev, I.S.,Wu, X.,Zhu, J.,Boyington, J.C.,Chen, X.,Shi, W.,Yang, Z.Y.,Doria-Rose, N.A.,McKee, K.,O'Dell, S.,Schmidt, S.D.,Chuang, G.Y.,Druz, A.,Soto, C.,Yang, Y.,Zhang, B.,Zhou, T.,Todd, J.P.,Lloyd, K.E.,Eudailey, J.,Roberts, K.E.,Donald, B.R.,Bailer, R.T.,Ledgerwood, J.,Mullikin, J.C.,Shapiro, L.,Koup, R.A.,Graham, B.S.,Nason, M.C.,Connors, M.,Haynes, B.F.,Rao, S.S.,Roederer, M.,Kwong, P.D.,Mascola, J.R.,Nabel, G.J. Enhanced Potency of a Broadly Neutralizing HIV-1 Antibody In Vitro Improves Protection against Lentiviral Infection In Vivo. J.Virol. 2014 88 12669 12682 4PPT 25143596 Engineered Dual Specific VHH Antibody in Complex with a Nickel (II) Ion 2014-02-27 2014-09-03 Fanning, S.W.,Walter, R.,Horn, J.R. Structural basis of an engineered dual-specific antibody: conformational diversity leads to a hypervariable loop metal-binding site. Protein Eng.Des.Sel. 2014 27 391 397 4M8Z 24403601 Crystal Structure of SFH3, a phosphatidylinositol transfer protein that integrates phosphoinositide signaling with lipid droplet metabolism 2013-08-14 2014-09-10 Ren, J.,Pei-Chen Lin, C.,Pathak, M.C.,Temple, B.R.,Nile, A.H.,Mousley, C.J.,Duncan, M.C.,Eckert, D.M.,Leiker, T.J.,Ivanova, P.T.,Myers, D.S.,Murphy, R.C.,Brown, H.A.,Verdaasdonk, J.,Bloom, K.S.,Ortlund, E.A.,Neiman, A.M.,Bankaitis, V.A. A phosphatidylinositol transfer protein integrates phosphoinositide signaling with lipid droplet metabolism to regulate a developmental program of nutrient stress-induced membrane biogenesis. Mol Biol Cell 2014 25 712 727 4QB0 25195755 The crystal structure of the C-terminal domain of Ebola (Zaire) nucleoprotein 2014-05-06 2014-09-10 Dziubanska, P.J.,Derewenda, U.,Ellena, J.F.,Engel, D.A.,Derewenda, Z.S. The structure of the C-terminal domain of the Zaire ebolavirus nucleoprotein. Acta Crystallogr.,Sect.D 2014 70 2420 2429 4QOY 25210042 Novel binding motif and new flexibility revealed by structural analysis of a pyruvate dehydrogenase-dihydrolipoyl acetyltransferase sub-complex from the escherichia coli pyruvate dehydrogenase multi-enzyme complex 2014-06-20 2014-09-17 Arjunan, P.,Wang, J.,Nemeria, N.S.,Reynolds, S.,Brown, I.,Chandrasekhar, K.,Calero, G.,Jordan, F.,Furey, W. Novel Binding Motif and New Flexibility Revealed by Structural Analyses of a Pyruvate Dehydrogenase-Dihydrolipoyl Acetyltransferase Subcomplex from the Escherichia coli Pyruvate Dehydrogenase Multienzyme Complex. J.Biol.Chem. 2014 289 30161 30176 4POU 25143596 VHH-metal in Complex with RNase A 2014-02-26 2014-09-24 Fanning, S.W.,Walter, R.,Horn, J.R. Structural basis of an engineered dual-specific antibody: conformational diversity leads to a hypervariable loop metal-binding site. Protein Eng.Des.Sel. 2014 27 391 397 4POY 25143596 Engineered Dual Specific VHH antibody 2014-02-26 2014-09-24 Fanning, S.W.,Walter, R.,Horn, J.R. Structural basis of an engineered dual-specific antibody: conformational diversity leads to a hypervariable loop metal-binding site. Protein Eng.Des.Sel. 2014 27 391 397 4NPT 24738918 Crystal Structure of HIV-1 Protease Multiple Mutant P51 Complexed with Darunavir 2013-11-22 2014-10-08 Zhang, Y.,Chang, Y.C.,Louis, J.M.,Wang, Y.F.,Harrison, R.W.,Weber, I.T. Structures of darunavir-resistant HIV-1 protease mutant reveal atypical binding of darunavir to wide open flaps. Acs Chem.Biol. 2014 9 1351 1358 4NPU 24738918 Crystal Structure of HIV-1 Protease Multiple Mutant P51 2013-11-22 2014-10-08 Zhang, Y.,Chang, Y.C.,Louis, J.M.,Wang, Y.F.,Harrison, R.W.,Weber, I.T. Structures of darunavir-resistant HIV-1 protease mutant reveal atypical binding of darunavir to wide open flaps. Acs Chem.Biol. 2014 9 1351 1358 4R2A 25258363 Egr1/Zif268 zinc fingers in complex with methylated DNA 2014-08-11 2014-10-08 Hashimoto, H.,Olanrewaju, Y.O.,Zheng, Y.,Wilson, G.G.,Zhang, X.,Cheng, X. Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence. Genes Dev. 2014 28 2304 2313 4R2C 25258363 Egr1/Zif268 zinc fingers in complex with hydroxymethylated DNA 2014-08-11 2014-10-08 Hashimoto, H.,Olanrewaju, Y.O.,Zheng, Y.,Wilson, G.G.,Zhang, X.,Cheng, X. Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence. Genes Dev. 2014 28 2304 2313 4R2D 25258363 Egr1/Zif268 zinc fingers in complex with formylated DNA 2014-08-11 2014-10-08 Hashimoto, H.,Olanrewaju, Y.O.,Zheng, Y.,Wilson, G.G.,Zhang, X.,Cheng, X. Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence. Genes Dev. 2014 28 2304 2313 4R2E 25258363 Wilms Tumor Protein (WT1) zinc fingers in complex with methylated DNA 2014-08-11 2014-10-08 Hashimoto, H.,Olanrewaju, Y.O.,Zheng, Y.,Wilson, G.G.,Zhang, X.,Cheng, X. Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence. Genes Dev. 2014 28 2304 2313 4R2P 25258363 Wilms Tumor Protein (WT1) zinc fingers in complex with hydroxymethylated DNA 2014-08-12 2014-10-08 Hashimoto, H.,Olanrewaju, Y.O.,Zheng, Y.,Wilson, G.G.,Zhang, X.,Cheng, X. Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence. Genes Dev. 2014 28 2304 2313 4R2Q 25258363 Wilms Tumor Protein (WT1) zinc fingers in complex with formylated DNA 2014-08-12 2014-10-08 Hashimoto, H.,Olanrewaju, Y.O.,Zheng, Y.,Wilson, G.G.,Zhang, X.,Cheng, X. Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence. Genes Dev. 2014 28 2304 2313 4R2S 25258363 Wilms Tumor Protein (WT1) Q369P zinc fingers in complex with methylated DNA 2014-08-12 2014-10-08 Hashimoto, H.,Olanrewaju, Y.O.,Zheng, Y.,Wilson, G.G.,Zhang, X.,Cheng, X. Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence. Genes Dev. 2014 28 2304 2313 4R7Z 25262915 PfMCM-AAA double-octamer 2014-08-28 2014-10-08 Miller, J.M.,Arachea, B.T.,Epling, L.B.,Enemark, E.J. Analysis of the crystal structure of an active MCM hexamer. Elife 2014 3 0 0 4QFX 25288794 Crystal structure of the tetrameric dGTP/dATP-bound SAMHD1 (RN206) mutant catalytic core 2014-05-21 2014-10-15 Koharudin, L.M.,Wu, Y.,DeLucia, M.,Mehrens, J.,Gronenborn, A.M.,Ahn, J. Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates. J.Biol.Chem. 2014 289 32617 32627 4QFY 25288794 Crystal structure of the tetrameric dGTP/dCTP-bound SAMHD1 (RN206) mutant catalytic core 2014-05-22 2014-10-15 Koharudin, L.M.,Wu, Y.,DeLucia, M.,Mehrens, J.,Gronenborn, A.M.,Ahn, J. Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates. J.Biol.Chem. 2014 289 32617 32627 4QFZ 25288794 Crystal structure of the tetrameric dGTP/dTTP-bound SAMHD1 (RN206) mutant catalytic core 2014-05-22 2014-10-15 Koharudin, L.M.,Wu, Y.,DeLucia, M.,Mehrens, J.,Gronenborn, A.M.,Ahn, J. Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates. J.Biol.Chem. 2014 289 32617 32627 4QG0 25288794 Crystal structure of the tetrameric dGTP/dUTP-bound SAMHD1 (RN206) mutant catalytic core 2014-05-22 2014-10-15 Koharudin, L.M.,Wu, Y.,DeLucia, M.,Mehrens, J.,Gronenborn, A.M.,Ahn, J. Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates. J.Biol.Chem. 2014 289 32617 32627 4QG1 25288794 Crystal structure of the tetrameric GTP/dATP-bound SAMHD1 (RN206) mutant catalytic core 2014-05-22 2014-10-15 Koharudin, L.M.,Wu, Y.,DeLucia, M.,Mehrens, J.,Gronenborn, A.M.,Ahn, J. Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates. J.Biol.Chem. 2014 289 32617 32627 4QG2 25288794 Crystal structure of the tetrameric GTP/dATP/ATP-bound SAMHD1 (RN206) mutant catalytic core 2014-05-22 2014-10-15 Koharudin, L.M.,Wu, Y.,DeLucia, M.,Mehrens, J.,Gronenborn, A.M.,Ahn, J. Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates. J.Biol.Chem. 2014 289 32617 32627 4QG4 25288794 Crystal structure of the tetrameric GTP/dATP/ATP-bound SAMHD1 (H210A) mutant catalytic core 2014-05-22 2014-10-15 Koharudin, L.M.,Wu, Y.,DeLucia, M.,Mehrens, J.,Gronenborn, A.M.,Ahn, J. Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates. J.Biol.Chem. 2014 289 32617 32627 4QTX 25343534 Caspase-3 Y195A 2014-07-09 2014-11-05 Cade, C.,Swartz, P.,MacKenzie, S.H.,Clark, A.C. Modifying caspase-3 activity by altering allosteric networks. Biochemistry 2014 53 7582 7595 4QTY 25343534 Caspase-3 E190A 2014-07-09 2014-11-05 Cade, C.,Swartz, P.,MacKenzie, S.H.,Clark, A.C. Modifying caspase-3 activity by altering allosteric networks. Biochemistry 2014 53 7582 7595 4QU0 25343534 Caspase-3 Y195AV266H 2014-07-10 2014-11-05 Cade, C.,Swartz, P.,MacKenzie, S.H.,Clark, A.C. Modifying caspase-3 activity by altering allosteric networks. Biochemistry 2014 53 7582 7595 4QU5 25343534 Caspase-3 T140V 2014-07-10 2014-11-05 Cade, C.,Swartz, P.,MacKenzie, S.H.,Clark, A.C. Modifying caspase-3 activity by altering allosteric networks. Biochemistry 2014 53 7582 7595 4QU8 25343534 Caspase-3 M61A V266H 2014-07-10 2014-11-05 Cade, C.,Swartz, P.,MacKenzie, S.H.,Clark, A.C. Modifying caspase-3 activity by altering allosteric networks. Biochemistry 2014 53 7582 7595 4QU9 25343534 Caspase-3 F128A 2014-07-10 2014-11-05 Cade, C.,Swartz, P.,MacKenzie, S.H.,Clark, A.C. Modifying caspase-3 activity by altering allosteric networks. Biochemistry 2014 53 7582 7595 4QUA 25343534 Caspase-3 Y195F 2014-07-10 2014-11-05 Cade, C.,Swartz, P.,MacKenzie, S.H.,Clark, A.C. Modifying caspase-3 activity by altering allosteric networks. Biochemistry 2014 53 7582 7595 4QUB 25343534 Caspase-3 K137A 2014-07-10 2014-11-05 Cade, C.,Swartz, P.,MacKenzie, S.H.,Clark, A.C. Modifying caspase-3 activity by altering allosteric networks. Biochemistry 2014 53 7582 7595 4QUD 25343534 Caspase-3 T140F 2014-07-10 2014-11-05 Cade, C.,Swartz, P.,MacKenzie, S.H.,Clark, A.C. Modifying caspase-3 activity by altering allosteric networks. Biochemistry 2014 53 7582 7595 4QUJ 25343534 Caspase-3 T140GV266H 2014-07-10 2014-11-05 Cade, C.,Swartz, P.,MacKenzie, S.H.,Clark, A.C. Modifying caspase-3 activity by altering allosteric networks. Biochemistry 2014 53 7582 7595 4U8W 25336073 HIV-1 wild Type protease with GRL-050-10A (a Gem-difluoro-bis-Tetrahydrofuran as P2-Ligand) 2014-08-05 2014-11-05 Ghosh, A.K.,Yashchuk, S.,Mizuno, A.,Chakraborty, N.,Agniswamy, J.,Wang, Y.F.,Aoki, M.,Gomez, P.M.,Amano, M.,Weber, I.T.,Mitsuya, H. Design of gem-Difluoro-bis-Tetrahydrofuran as P2 Ligand for HIV-1 Protease Inhibitors to Improve Brain Penetration: Synthesis, X-ray Studies, and Biological Evaluation. Chemmedchem 2015 10 107 115 4MCF 25377354 Crystal structure of the Gas5 GRE Mimic 2013-08-21 2014-11-12 Hudson, W.H.,Pickard, M.R.,de Vera, I.M.,Kuiper, E.G.,Mourtada-Maarabouni, M.,Conn, G.L.,Kojetin, D.J.,Williams, G.T.,Ortlund, E.A. Conserved sequence-specific lincRNA-steroid receptor interactions drive transcriptional repression and direct cell fate. Nat Commun 2014 5 5395 5395 4UAW 25409153 DNA polymerase beta substrate complex with a templating adenine and incoming 8-oxodGTP, 0 s 2014-08-11 2014-11-12 Freudenthal, B.D.,Beard, W.A.,Perera, L.,Shock, D.D.,Kim, T.,Schlick, T.,Wilson, S.H. Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide. Nature 2015 517 635 639 4UAY 25409153 DNA polymerase beta product complex with a templating adenine and inserted 8-oxodGMP, 40 s 2014-08-11 2014-11-12 Freudenthal, B.D.,Beard, W.A.,Perera, L.,Shock, D.D.,Kim, T.,Schlick, T.,Wilson, S.H. Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide. Nature 2015 517 635 639 4UAZ 25409153 DNA polymerase beta reactant complex with a templating adenine and incoming 8-oxodGTP, 20 s 2014-08-11 2014-11-12 Freudenthal, B.D.,Beard, W.A.,Perera, L.,Shock, D.D.,Kim, T.,Schlick, T.,Wilson, S.H. Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide. Nature 2015 517 635 639 4UB1 25409153 DNA polymerase beta product complex with a templating adenine and 8-oxodGMP, 90 s 2014-08-11 2014-11-12 Freudenthal, B.D.,Beard, W.A.,Perera, L.,Shock, D.D.,Kim, T.,Schlick, T.,Wilson, S.H. Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide. Nature 2015 517 635 639 4UBB 25409153 DNA polymerase beta reactant complex with a templating cytosine and incoming 8-oxodGTP, 40 s 2014-08-12 2014-11-12 Freudenthal, B.D.,Beard, W.A.,Perera, L.,Shock, D.D.,Kim, T.,Schlick, T.,Wilson, S.H. Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide. Nature 2015 517 635 639 4QGO 25372684 Crystal structure of NucA from Streptococcus agalactiae with no metal bound 2014-05-23 2014-11-19 Moon, A.F.,Gaudu, P.,Pedersen, L.C. Structural characterization of the virulence factor nuclease A from Streptococcus agalactiae. Acta Crystallogr.,Sect.D 2014 70 2937 2949 4U92 25389267 Crystal structure of a DNA/Ba2+ G-quadruplex containing a water-mediated C-tetrad 2014-08-05 2014-11-26 Zhang, D.,Huang, T.,Lukeman, P.S.,Paukstelis, P.J. Crystal structure of a DNA/Ba2+ G-quadruplex containing a water-mediated C-tetrad. Nucleic Acids Res. 2014 42 13422 13429 4NPI 25565451 1.94 Angstroms X-ray crystal structure of NAD- and intermediate- bound alpha-aminomuconate-epsilon-semialdehyde dehydrogenase from Pseudomonas fluorescens 2013-11-21 2014-12-24 Huo, L.,Davis, I.,Liu, F.,Andi, B.,Esaki, S.,Iwaki, H.,Hasegawa, Y.,Orville, A.M.,Liu, A. Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action. Nat Commun 2015 6 5935 5935 4OE2 25565451 2.00 Angstroms X-ray crystal structure of E268A 2-aminomuconate 6-semialdehyde dehydrogenase from Pseudomonas fluorescens 2014-01-11 2014-12-24 Huo, L.,Davis, I.,Liu, F.,Andi, B.,Esaki, S.,Iwaki, H.,Hasegawa, Y.,Orville, A.M.,Liu, A. Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action. Nat Commun 2015 6 5935 5935 4OU2 25565451 A 2.15 Angstroms X-ray crystal structure of E268A 2-aminomuconate 6-semialdehyde dehydrogenase catalytic intermediate from Pseudomonas fluorescens 2014-02-14 2014-12-24 Huo, L.,Davis, I.,Liu, F.,Andi, B.,Esaki, S.,Iwaki, H.,Hasegawa, Y.,Orville, A.M.,Liu, A. Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action. Nat Commun 2015 6 5935 5935 4OUB 25565451 A 2.20 angstroms X-ray crystal structure of E268A 2-aminomucaonate 6-semialdehyde dehydrogenase catalytic intermediate from Pseudomonas fluorescens 2014-02-15 2014-12-24 Huo, L.,Davis, I.,Liu, F.,Andi, B.,Esaki, S.,Iwaki, H.,Hasegawa, Y.,Orville, A.M.,Liu, A. Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action. Nat Commun 2015 6 5935 5935 4QNB 25518861 Disulfide stabilized HIV-1 CA hexamer in complex with PHENYL-L-PHENYLALANINAMIDE inhibitor 2014-06-17 2014-12-31 Bhattacharya, A.,Alam, S.L.,Fricke, T.,Zadrozny, K.,Sedzicki, J.,Taylor, A.B.,Demeler, B.,Pornillos, O.,Ganser-Pornillos, B.K.,Diaz-Griffero, F.,Ivanov, D.N.,Yeager, M. Structural basis of HIV-1 capsid recognition by PF74 and CPSF6. Proc.Natl.Acad.Sci.USA 2014 111 18625 18630 4RJT 25478983 Crystal Structure of Unliganded, Full Length hUGDH at pH 7.0 2014-10-09 2014-12-31 Kadirvelraj, R.,Custer, G.S.,Keul, N.D.,Sennett, N.C.,Sidlo, A.M.,Walsh Jr., R.M.,Wood, Z.A. Hysteresis in Human UDP-Glucose Dehydrogenase Is Due to a Restrained Hexameric Structure That Favors Feedback Inhibition. Biochemistry 2014 53 8043 8051 4WIL 25538247 Crystal structure of DCoH2 S51T 2014-09-26 2014-12-31 Wang, D.,Coco, M.W.,Rose, R.B. Interactions with the Bifunctional Interface of the Transcriptional Coactivator DCoH1 Are Kinetically Regulated. J.Biol.Chem. 2015 290 4319 4329 4RNU 25692074 G303 Circular Permutation of Old Yellow Enzyme 2014-10-26 2015-01-14 Daugherty, A.B.,Horton, J.R.,Cheng, X.,Lutz, S. STRUCTURAL AND FUNCTIONAL CONSEQUENCES OF CIRCULAR PERMUTATION ON THE ACTIVE SITE OF OLD YELLOW ENZYME. ACS Catal 2015 5 892 899 4RNV 25692074 G303 Circular Permutation of Old Yellow Enzyme with the Inhibitor p-Hydroxybenzaldehyde 2014-10-26 2015-01-14 Daugherty, A.B.,Horton, J.R.,Cheng, X.,Lutz, S. STRUCTURAL AND FUNCTIONAL CONSEQUENCES OF CIRCULAR PERMUTATION ON THE ACTIVE SITE OF OLD YELLOW ENZYME. ACS Catal 2015 5 892 899 4RNX 25692074 K154 Circular Permutation of Old Yellow Enzyme 2014-10-26 2015-01-14 Daugherty, A.B.,Horton, J.R.,Cheng, X.,Lutz, S. STRUCTURAL AND FUNCTIONAL CONSEQUENCES OF CIRCULAR PERMUTATION ON THE ACTIVE SITE OF OLD YELLOW ENZYME. ACS Catal 2015 5 892 899 4N5S 25537790 Ternary complex structure of Klenow fragment of Taq DNA polymerase I707L mutant (Cs3C KlenTaq) with DNA and ddCTP 2013-10-10 2015-01-21 Wu, E.Y.,Walsh, A.R.,Materne, E.C.,Hiltner, E.P.,Zielinski, B.,Miller, B.R.,Mawby, L.,Modeste, E.,Parish, C.A.,Barnes, W.M.,Kermekchiev, M.B. A Conservative Isoleucine to Leucine Mutation Causes Major Rearrangements and Cold Sensitivity in KlenTaq1 DNA Polymerase. Biochemistry 2015 54 881 889 4N22 25621824 Crystal structure of Protein Arginine Deiminase 2 (50 uM Ca2+) 2013-10-04 2015-02-04 Slade, D.J.,Fang, P.,Dreyton, C.J.,Zhang, Y.,Fuhrmann, J.,Rempel, D.,Bax, B.D.,Coonrod, S.A.,Lewis, H.D.,Guo, M.,Gross, M.L.,Thompson, P.R. Protein arginine deiminase 2 binds calcium in an ordered fashion: implications for inhibitor design. Acs Chem.Biol. 2015 10 1043 1053 4N24 25621824 Crystal structure of Protein Arginine Deiminase 2 (100 uM Ca2+) 2013-10-04 2015-02-04 Slade, D.J.,Fang, P.,Dreyton, C.J.,Zhang, Y.,Fuhrmann, J.,Rempel, D.,Bax, B.D.,Coonrod, S.A.,Lewis, H.D.,Guo, M.,Gross, M.L.,Thompson, P.R. Protein arginine deiminase 2 binds calcium in an ordered fashion: implications for inhibitor design. Acs Chem.Biol. 2015 10 1043 1053 4N25 25621824 Crystal structure of Protein Arginine Deiminase 2 (250 uM Ca2+) 2013-10-04 2015-02-04 Slade, D.J.,Fang, P.,Dreyton, C.J.,Zhang, Y.,Fuhrmann, J.,Rempel, D.,Bax, B.D.,Coonrod, S.A.,Lewis, H.D.,Guo, M.,Gross, M.L.,Thompson, P.R. Protein arginine deiminase 2 binds calcium in an ordered fashion: implications for inhibitor design. Acs Chem.Biol. 2015 10 1043 1053 4N26 25621824 Crystal structure of Protein Arginine Deiminase 2 (500 uM Ca2+) 2013-10-04 2015-02-04 Slade, D.J.,Fang, P.,Dreyton, C.J.,Zhang, Y.,Fuhrmann, J.,Rempel, D.,Bax, B.D.,Coonrod, S.A.,Lewis, H.D.,Guo, M.,Gross, M.L.,Thompson, P.R. Protein arginine deiminase 2 binds calcium in an ordered fashion: implications for inhibitor design. Acs Chem.Biol. 2015 10 1043 1053 4N28 25621824 Crystal structure of Protein Arginine Deiminase 2 (1 mM Ca2+) 2013-10-04 2015-02-04 Slade, D.J.,Fang, P.,Dreyton, C.J.,Zhang, Y.,Fuhrmann, J.,Rempel, D.,Bax, B.D.,Coonrod, S.A.,Lewis, H.D.,Guo, M.,Gross, M.L.,Thompson, P.R. Protein arginine deiminase 2 binds calcium in an ordered fashion: implications for inhibitor design. Acs Chem.Biol. 2015 10 1043 1053 4WE4 25617824 The crystal structure of hemagglutinin from 1968 H3N2 influenza virus 2014-09-09 2015-02-11 Yang, H.,Carney, P.J.,Chang, J.C.,Guo, Z.,Villanueva, J.M.,Stevens, J. Structure and receptor binding preferences of recombinant human A(H3N2) virus hemagglutinins. Virology 2015 0 18 31 4QF1 25526306 Crystal structure of unliganded CH59UA, the inferred unmutated ancestor of the RV144 anti-HIV antibody lineage producing CH59 2014-05-19 2015-02-18 Wiehe, K.,Easterhoff, D.,Luo, K.,Nicely, N.I.,Bradley, T.,Jaeger, F.H.,Dennison, S.M.,Zhang, R.,Lloyd, K.E.,Stolarchuk, C.,Parks, R.,Sutherland, L.L.,Scearce, R.M.,Morris, L.,Kaewkungwal, J.,Nitayaphan, S.,Pitisuttithum, P.,Rerks-Ngarm, S.,Sinangil, F.,Phogat, S.,Michael, N.L.,Kim, J.H.,Kelsoe, G.,Montefiori, D.C.,Tomaras, G.D.,Bonsignori, M.,Santra, S.,Kepler, T.B.,Alam, S.M.,Moody, M.A.,Liao, H.X.,Haynes, B.F. Antibody Light-Chain-Restricted Recognition of the Site of Immune Pressure in the RV144 HIV-1 Vaccine Trial Is Phylogenetically Conserved. Immunity 2014 41 909 918 4WOH 25664796 Structure of of human dual-specificity phosphatase 22 (E24A/K28A/K30A/C88S) complexed with 4-nitrophenolphosphate 2014-10-15 2015-02-18 Lountos, G.T.,Cherry, S.,Tropea, J.E.,Waugh, D.S. Structural analysis of human dual-specificity phosphatase 22 complexed with a phosphotyrosine-like substrate. Acta Crystallogr.,Sect.F 2015 71 199 205 4QVB 25644473 Mycobacterium tuberculosis protein Rv1155 in complex with co-enzyme F420 2014-07-14 2015-02-25 Mashalidis, E.H.,Gittis, A.G.,Tomczak, A.,Abell, C.,Barry, C.E.,Garboczi, D.N. Molecular insights into the binding of coenzyme F420 to the conserved protein Rv1155 from Mycobacterium tuberculosis. Protein Sci. 2015 24 729 740 4WSS 25673707 The crystal structure of hemagglutinin form A/chicken/New York/14677-13/1998 in complex with LSTa 2014-10-28 2015-02-25 Yang, H.,Carney, P.J.,Chang, J.C.,Villanueva, J.M.,Stevens, J. Structure and receptor binding preferences of recombinant hemagglutinins from avian and human h6 and h10 influenza a virus subtypes. J.Virol. 2015 89 4612 4623 4XDS 25694425 Deoxyguanosinetriphosphate Triphosphohydrolase from Escherichia coli with Nickel 2014-12-19 2015-02-25 Singh, D.,Gawel, D.,Itsko, M.,Hochkoeppler, A.,Krahn, J.M.,London, R.E.,Schaaper, R.M. Structure of Escherichia coli dGTP Triphosphohydrolase: A HEXAMERIC ENZYME WITH DNA EFFECTOR MOLECULES. J.Biol.Chem. 2015 290 10418 10429 4P1H Crystal structure of wild type Hypocrea jecorina Cel7a in a monoclinic crystal form 2014-02-26 2015-03-04 Bodenheimer, A.M.,Cuneo, M.J.,Swartz, P.D.,Myles, D.A.,Meilleur, F. Crystal structure of wild type Hypocrea jecorina Cel7a in a monoclinic crystal form to be published 0 0 0 0 4Q9G 25312595 Crystal structure of K12V/C16S/C117V/P134V mutant of human acidic fibroblast growth factor 2014-05-01 2015-03-11 Xia, X.,Longo, L.M.,Blaber, M. Mutation choice to eliminate buried free cysteines in protein therapeutics. J.Pharm.Sci. 2015 104 566 576 4Q9P 25312595 Crystal structure of C16T/K12V/C117V/P134V mutant of human acidic fibroblast growth factor 2014-05-01 2015-03-11 Xia, X.,Longo, L.M.,Blaber, M. Mutation choice to eliminate buried free cysteines in protein therapeutics. J.Pharm.Sci. 2015 104 566 576 4QAL 25312595 Crystal structure of C117A mutant of human acidic fibroblast growth factor 2014-05-05 2015-03-11 Xia, X.,Longo, L.M.,Blaber, M. Mutation choice to eliminate buried free cysteines in protein therapeutics. J.Pharm.Sci. 2015 104 566 576 4QBC 25312595 Crystal structure of C117T mutant of human acidic fibroblast growth factor in sodium formate buffer 2014-05-07 2015-03-11 Xia, X.,Longo, L.M.,Blaber, M. Mutation choice to eliminate buried free cysteines in protein therapeutics. J.Pharm.Sci. 2015 104 566 576 4QBV 25312595 Crystal structure of C117T mutant of human acidic fibroblast growth factor in sodium citrate buffer 2014-05-08 2015-03-11 Xia, X.,Longo, L.M.,Blaber, M. Mutation choice to eliminate buried free cysteines in protein therapeutics. J.Pharm.Sci. 2015 104 566 576 4QC4 25312595 Crystal structure of C117S mutant of human acidic fibroblast growth factor 2014-05-09 2015-03-11 Xia, X.,Longo, L.M.,Blaber, M. Mutation choice to eliminate buried free cysteines in protein therapeutics. J.Pharm.Sci. 2015 104 566 576 4S3M 25946571 Evidence of kinetic cooperativity in dimeric Ketopantoate Reductase from Staphylococcus aureus 2015-02-19 2015-03-11 Sanchez, J.E.,Gross, P.G.,Goetze, R.W.,Walsh Jr., R.M.,Peeples, W.B.,Wood, Z.A. Evidence of Kinetic Cooperativity in Dimeric Ketopantoate Reductase from Staphylococcus aureus. Biochemistry 2015 54 3360 3369 4XVK 25775266 Binary complex of human polymerase nu and DNA with the finger domain closed 2015-01-27 2015-03-11 Lee, Y.S.,Gao, Y.,Yang, W. How a homolog of high-fidelity replicases conducts mutagenic DNA synthesis. Nat.Struct.Mol.Biol. 2015 22 298 303 4XVL 25775266 Binary complex of human polymerase nu and DNA with the finger domain open 2015-01-27 2015-03-11 Lee, Y.S.,Gao, Y.,Yang, W. How a homolog of high-fidelity replicases conducts mutagenic DNA synthesis. Nat.Struct.Mol.Biol. 2015 22 298 303 4XVM 25775266 Binary complex of human polymerase nu and DNA with the finger domain closed and thumb domain rotated out 2015-01-27 2015-03-11 Lee, Y.S.,Gao, Y.,Yang, W. How a homolog of high-fidelity replicases conducts mutagenic DNA synthesis. Nat.Struct.Mol.Biol. 2015 22 298 303 4YCA 25946571 Evidence of Kinetic Cooperativity in dimeric Ketopantoate Reductase from Staphylococcus aureus 2015-02-19 2015-03-11 Sanchez, J.E.,Gross, P.G.,Goetze, R.W.,Walsh Jr., R.M.,Peeples, W.B.,Wood, Z.A. Evidence of Kinetic Cooperativity in Dimeric Ketopantoate Reductase from Staphylococcus aureus. Biochemistry 2015 54 3360 3369 4TWE 25752612 Structure of ligand-free N-acetylated-alpha-linked-acidic-dipeptidase like protein (NAALADaseL) 2014-06-30 2015-03-18 Tykvart, J.,Barinka, C.,Svoboda, M.,Navratil, V.,Soucek, R.,Hubalek, M.,Hradilek, M.,Sacha, P.,Lubkowski, J.,Konvalinka, J. Structural and biochemical characterization of a novel aminopeptidase from human intestine. J.Biol.Chem. 2015 290 11321 11336 4Q5F Crystal Structure of the Glutathione S-transferase from Ascaris lumbricoides 2014-04-16 2015-04-01 Pedersen, L.C.,Mueller, G.A. Crystal Structure of the Glutathione S-transferase from Ascaris lumbricoides To be Published 0 0 0 0 1VYA 25679041 Identification and characterization of the first plant G-quadruplex binding protein encoded by the Zea mays L. nucleoside diphosphate1 gene, ZmNDPK1 2014-08-14 2015-04-08 Kopylov, M.,Bass, H.W.,Stroupe, M.E. The Maize (Zea mays L.) Nucleoside Diphosphate Kinase1 (ZmNDPK1) Gene Encodes a Human NM23-H2 Homologue That Binds and Stabilizes G-Quadruplex DNA. Biochemistry 2015 54 1743 1757 4QDR 25752543 Physical basis for Nrp2 ligand binding 2014-05-14 2015-04-15 Parker, M.W.,Linkugel, A.D.,Goel, H.L.,Wu, T.,Mercurio, A.M.,Vander Kooi, C.W. Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form. Structure 2015 23 677 687 4RTK 25845600 Complex of Escherichia coli DNA Adenine Methyltransferase (DAM) with SAH and with DNA Containing Distal Pap Regulon Sequence 2014-11-15 2015-04-15 Horton, J.R.,Zhang, X.,Blumenthal, R.M.,Cheng, X. Structures of Escherichia coli DNA adenine methyltransferase (Dam) in complex with a non-GATC sequence: potential implications for methylation-independent transcriptional repression. Nucleic Acids Res. 2015 43 4296 4308 4RTL 25845600 Complex of Escherichia coli DNA Adenine Methyltransferase (DAM) with Sinefungin and with DNA Containing Distal Pap Regulon Sequence 2014-11-15 2015-04-15 Horton, J.R.,Zhang, X.,Blumenthal, R.M.,Cheng, X. Structures of Escherichia coli DNA adenine methyltransferase (Dam) in complex with a non-GATC sequence: potential implications for methylation-independent transcriptional repression. Nucleic Acids Res. 2015 43 4296 4308 4RTN 25845600 Complex of Escherichia coli DNA Adenine Methyltransferase (DAM) with AdoHcy and with DNA Containing Proximal Pap Regulon Sequence 2014-11-15 2015-04-15 Horton, J.R.,Zhang, X.,Blumenthal, R.M.,Cheng, X. Structures of Escherichia coli DNA adenine methyltransferase (Dam) in complex with a non-GATC sequence: potential implications for methylation-independent transcriptional repression. Nucleic Acids Res. 2015 43 4296 4308 4S1S 25865483 Crystal structure of a VRC01-lineage antibody, 45-VRC01.H5.F-185917, in complex with clade A/E HIV-1 gp120 core 2015-01-14 2015-04-22 Wu, X.,Zhang, Z.,Schramm, C.A.,Joyce, M.G.,Do Kwon, Y.,Zhou, T.,Sheng, Z.,Zhang, B.,O'Dell, S.,McKee, K.,Georgiev, I.S.,Chuang, G.Y.,Longo, N.S.,Lynch, R.M.,Saunders, K.O.,Soto, C.,Srivatsan, S.,Yang, Y.,Bailer, R.T.,Louder, M.K.,Mullikin, J.C.,Connors, M.,Kwong, P.D.,Mascola, J.R.,Shapiro, L. Maturation and Diversity of the VRC01-Antibody Lineage over 15 Years of Chronic HIV-1 Infection. Cell(Cambridge,Mass.) 2015 161 470 485 4QGS Substrate and cofactor-free form of the Aldehyde Reductase YqhD from E. coli. 2014-05-24 2015-05-06 LaMattina, J.W.,Kapoor, S.,Gouvea, I.,Slovic, A.,Lanzilotta, W.N. Open form of E. coli YqhD To be Published 0 0 0 0 4WME 25945576 Crystal structure of catalytically inactive MERS-CoV 3CL Protease (C148A) in spacegroup C2 2014-10-08 2015-05-13 Needle, D.,Lountos, G.T.,Waugh, D.S. Structures of the Middle East respiratory syndrome coronavirus 3C-like protease reveal insights into substrate specificity. Acta Crystallogr.,Sect.D 2015 71 1102 1111 4P4B 26460595 X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a phosphoramidate inhibitor CTT54 2014-03-12 2015-05-20 Novakova, Z.,Cerny, J.,Choy, C.J.,Nedrow, J.R.,Choi, J.K.,Lubkowski, J.,Berkman, C.E.,Barinka, C. Design of composite inhibitors targeting glutamate carboxypeptidase II: the importance of effector functionalities. Febs J. 2016 283 130 143 4P4D 26460595 X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a phosphoramidate inhibitor MP1C 2014-03-12 2015-05-20 Novakova, Z.,Cerny, J.,Choy, C.J.,Nedrow, J.R.,Choi, J.K.,Lubkowski, J.,Berkman, C.E.,Barinka, C. Design of composite inhibitors targeting glutamate carboxypeptidase II: the importance of effector functionalities. Febs J. 2016 283 130 143 4P4F 26460595 X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a phosphoramidate inhibitor NC-2-40 2014-03-12 2015-05-20 Novakova, Z.,Cerny, J.,Choy, C.J.,Nedrow, J.R.,Choi, J.K.,Lubkowski, J.,Berkman, C.E.,Barinka, C. Design of composite inhibitors targeting glutamate carboxypeptidase II: the importance of effector functionalities. Febs J. 2016 283 130 143 4P4I 26460595 X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a phosphoramidate inhibitor T33 2014-03-12 2015-05-20 Novakova, Z.,Cerny, J.,Choy, C.J.,Nedrow, J.R.,Choi, J.K.,Lubkowski, J.,Berkman, C.E.,Barinka, C. Design of composite inhibitors targeting glutamate carboxypeptidase II: the importance of effector functionalities. Febs J. 2016 283 130 143 4P4J 26460595 X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a phosphoramidate inhibitor T33D 2014-03-12 2015-05-20 Novakova, Z.,Cerny, J.,Choy, C.J.,Nedrow, J.R.,Choi, J.K.,Lubkowski, J.,Berkman, C.E.,Barinka, C. Design of composite inhibitors targeting glutamate carboxypeptidase II: the importance of effector functionalities. Febs J. 2016 283 130 143 4PKM 25957471 Crystal Structure of Bacillus thuringiensis Cry51Aa1 Protoxin at 1.65 Angstroms Resolution 2014-05-15 2015-06-03 Xu, C.,Chinte, U.,Chen, L.,Yao, Q.,Meng, Y.,Zhou, D.,Bi, L.J.,Rose, J.,Adang, M.J.,Wang, B.C.,Yu, Z.,Sun, M. Crystal structure of Cry51Aa1: A potential novel insecticidal aerolysin-type beta-pore-forming toxin from Bacillus thuringiensis. Biochem.Biophys.Res.Commun. 2015 462 184 189 4PKM 25957471 Crystal Structure of Bacillus thuringiensis Cry51Aa1 Protoxin at 1.65 Angstroms Resolution 2014-05-15 2015-06-03 Xu, C.,Chinte, U.,Chen, L.,Yao, Q.,Meng, Y.,Zhou, D.,Bi, L.J.,Rose, J.,Adang, M.J.,Wang, B.C.,Yu, Z.,Sun, M. Crystal structure of Cry51Aa1: A potential novel insecticidal aerolysin-type beta-pore-forming toxin from Bacillus thuringiensis. Biochem.Biophys.Res.Commun. 2015 462 184 189 4Y2E 26057789 Crystal structure of the catalytic domain of human dual-specificity phosphatase 7 (C232S) 2015-02-09 2015-06-03 Lountos, G.T.,Austin, B.P.,Tropea, J.E.,Waugh, D.S. Structure of human dual-specificity phosphatase 7, a potential cancer drug target. Acta Crystallogr.,Sect.F 2015 71 650 656 4YDJ 26004070 Crystal structure of broadly and potently neutralizing antibody 44-VRC13.01 in complex with HIV-1 clade AE strain 93TH057 gp120 2015-02-22 2015-06-03 Zhou, T.,Lynch, R.M.,Chen, L.,Acharya, P.,Wu, X.,Doria-Rose, N.A.,Joyce, M.G.,Lingwood, D.,Soto, C.,Bailer, R.T.,Ernandes, M.J.,Kong, R.,Longo, N.S.,Louder, M.K.,McKee, K.,O'Dell, S.,Schmidt, S.D.,Tran, L.,Yang, Z.,Druz, A.,Luongo, T.S.,Moquin, S.,Srivatsan, S.,Yang, Y.,Zhang, B.,Zheng, A.,Pancera, M.,Kirys, T.,Georgiev, I.S.,Gindin, T.,Peng, H.P.,Yang, A.S.,Mullikin, J.C.,Gray, M.D.,Stamatatos, L.,Burton, D.R.,Koff, W.C.,Cohen, M.S.,Haynes, B.F.,Casazza, J.P.,Connors, M.,Corti, D.,Lanzavecchia, A.,Sattentau, Q.J.,Weiss, R.A.,West, A.P.,Bjorkman, P.J.,Scheid, J.F.,Nussenzweig, M.C.,Shapiro, L.,Mascola, J.R.,Kwong, P.D. Structural Repertoire of HIV-1-Neutralizing Antibodies Targeting the CD4 Supersite in 14 Donors. Cell 2015 161 1280 1292 4Z8L 26045556 Crystal structure of DCAF1/SIV-MND VPX/MND SAMHD1 NTD ternary complex 2015-04-09 2015-06-17 Wu, Y.,Koharudin, L.M.,Mehrens, J.,DeLucia, M.,Byeon, C.H.,Byeon, I.J.,Calero, G.,Ahn, J.,Gronenborn, A.M. Structural Basis of Clade-specific Engagement of SAMHD1 (Sterile alpha Motif and Histidine/Aspartate-containing Protein 1) Restriction Factors by Lentiviral Viral Protein X (Vpx) Virulence Factors. J.Biol.Chem. 2015 290 17935 17945 4QMQ 27135311 MST3 in complex with CP-673451 2014-06-16 2015-07-01 Olesen, S.H.,Zhu, J.Y.,Martin, M.P.,Schonbrunn, E. Discovery of Diverse Small-Molecule Inhibitors of Mammalian Sterile20-like Kinase 3 (MST3). Chemmedchem 2016 11 1137 1144 4QMT 27135311 MST3 in complex with HESPERADIN 2014-06-16 2015-07-01 Olesen, S.H.,Zhu, J.Y.,Martin, M.P.,Schonbrunn, E. Discovery of Diverse Small-Molecule Inhibitors of Mammalian Sterile20-like Kinase 3 (MST3). Chemmedchem 2016 11 1137 1144 4QMV 27135311 MST3 IN COMPLEX WITH PF-03814735, N-{2-[(1S,4R)-6-{[4-(CYCLOBUTYLAMINO)-5-(TRIFLUOROMETHYL)PYRIMIDIN-2-YL]AMINO}-1,2,3,4-TETRAHYDRO-1,4-EPIMINONAPHTHALEN-9-YL]-2-OXOETHYL}ACETAMIDE 2014-06-16 2015-07-01 Olesen, S.H.,Zhu, J.Y.,Martin, M.P.,Schonbrunn, E. Discovery of Diverse Small-Molecule Inhibitors of Mammalian Sterile20-like Kinase 3 (MST3). Chemmedchem 2016 11 1137 1144 4ZLS 26107245 HIV-1 wild Type protease with GRL-096-13A (a Boc-derivative P2-Ligand, 3,-5-dimethylbiphenyl P1-Ligand) 2015-05-01 2015-07-15 Ghosh, A.K.,Yu, X.,Osswald, H.L.,Agniswamy, J.,Wang, Y.F.,Amano, M.,Weber, I.T.,Mitsuya, H. Structure-Based Design of Potent HIV-1 Protease Inhibitors with Modified P1-Biphenyl Ligands: Synthesis, Biological Evaluation, and Enzyme-Inhibitor X-ray Structural Studies. J.Med.Chem. 2015 58 5334 5343 5BYA 26153667 Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with ADP and 1,5-(PCP)2-IP4 2015-06-10 2015-07-22 Riley, A.M.,Wang, H.,Shears, S.B.,L Potter, B.V. Synthetic tools for studying the chemical biology of InsP8. Chem.Commun.(Camb.) 2015 51 12605 12608 5BYB 26153667 Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with ADP and 1,5-(PA)2-IP4 2015-06-10 2015-07-22 Riley, A.M.,Wang, H.,Shears, S.B.,L Potter, B.V. Synthetic tools for studying the chemical biology of InsP8. Chem.Commun.(Camb.) 2015 51 12605 12608 4QO9 27135311 MST3 IN COMPLEX WITH Danusertib 2014-06-19 2015-07-29 Olesen, S.H.,Zhu, J.Y.,Martin, M.P.,Schonbrunn, E. Discovery of Diverse Small-Molecule Inhibitors of Mammalian Sterile20-like Kinase 3 (MST3). Chemmedchem 2016 11 1137 1144 4RIR 26288844 Structural Analysis of the Unmutated Ancestor of the HIV-1 Envelope V2 Region Antibody CH58 Isolated From an RV144 HIV-1 Vaccine Efficacy Trial Vaccinee and Associated with Decreased Transmission Risk 2014-10-07 2015-08-12 Nicely, N.I.,Wiehe, K.,Kepler, T.B.,Jaeger, F.H.,Dennison, S.M.,Rerks-Ngarm, S.,Nitayaphan, S.,Pitisuttithum, P.,Kaewkungwal, J.,Robb, M.L.,O'Connell, R.J.,Michael, N.L.,Kim, J.H.,Liao, H.X.,Munir Alam, S.,Hwang, K.K.,Bonsignori, M.,Haynes, B.F. Structural analysis of the unmutated ancestor of the HIV-1 envelope V2 region antibody CH58 isolated from an RV144 vaccine efficacy trial vaccinee. EBioMedicine 2015 2 713 722 4RIS 26288844 Structural Analysis of the Unmutated Ancestor of the HIV-1 Envelope V2 Region Antibody CH58 Isolated From an RV144 HIV-1 Vaccine Efficacy Trial Vaccinee and Associated with Decreased Transmission Risk 2014-10-07 2015-08-12 Nicely, N.I.,Wiehe, K.,Kepler, T.B.,Jaeger, F.H.,Dennison, S.M.,Rerks-Ngarm, S.,Nitayaphan, S.,Pitisuttithum, P.,Kaewkungwal, J.,Robb, M.L.,O'Connell, R.J.,Michael, N.L.,Kim, J.H.,Liao, H.X.,Munir Alam, S.,Hwang, K.K.,Bonsignori, M.,Haynes, B.F. Structural analysis of the unmutated ancestor of the HIV-1 envelope V2 region antibody CH58 isolated from an RV144 vaccine efficacy trial vaccinee. EBioMedicine 2015 2 713 722 4YDV 26237403 STRUCTURE OF THE ANTIBODY 7B2 THAT CAPTURES HIV-1 VIRIONS 2015-02-23 2015-08-12 Santra, S.,Tomaras, G.D.,Warrier, R.,Nicely, N.I.,Liao, H.X.,Pollara, J.,Liu, P.,Alam, S.M.,Zhang, R.,Cocklin, S.L.,Shen, X.,Duffy, R.,Xia, S.M.,Schutte, R.J.,Pemble Iv, C.W.,Dennison, S.M.,Li, H.,Chao, A.,Vidnovic, K.,Evans, A.,Klein, K.,Kumar, A.,Robinson, J.,Landucci, G.,Forthal, D.N.,Montefiori, D.C.,Kaewkungwal, J.,Nitayaphan, S.,Pitisuttithum, P.,Rerks-Ngarm, S.,Robb, M.L.,Michael, N.L.,Kim, J.H.,Soderberg, K.A.,Giorgi, E.E.,Blair, L.,Korber, B.T.,Moog, C.,Shattock, R.J.,Letvin, N.L.,Schmitz, J.E.,Moody, M.A.,Gao, F.,Ferrari, G.,Shaw, G.M.,Haynes, B.F. Human Non-neutralizing HIV-1 Envelope Monoclonal Antibodies Limit the Number of Founder Viruses during SHIV Mucosal Infection in Rhesus Macaques. Plos Pathog. 2015 11 0 0 4YIX 26117548 Structure of MRB1590 bound to ADP 2015-03-02 2015-08-12 Shaw, P.L.,McAdams, N.M.,Hast, M.A.,Ammerman, M.L.,Read, L.K.,Schumacher, M.A. Structures of the T. brucei kRNA editing factor MRB1590 reveal unique RNA-binding pore motif contained within an ABC-ATPase fold. Nucleic Acids Res. 2015 43 7096 7109 4YIY 26117548 Structure of MRB1590 bound to AMP-PNP 2015-03-02 2015-08-12 Shaw, P.L.,McAdams, N.M.,Hast, M.A.,Ammerman, M.L.,Read, L.K.,Schumacher, M.A. Structures of the T. brucei kRNA editing factor MRB1590 reveal unique RNA-binding pore motif contained within an ABC-ATPase fold. Nucleic Acids Res. 2015 43 7096 7109 5C0R 26301691 Crystal Structure of a Generation 3 Influenza Hemagglutinin Stabilized Stem Complexed with the Broadly Neutralizing Antibody C179 2015-06-12 2015-09-02 Yassine, H.M.,Boyington, J.C.,McTamney, P.M.,Wei, C.J.,Kanekiyo, M.,Kong, W.P.,Gallagher, J.R.,Wang, L.,Zhang, Y.,Joyce, M.G.,Lingwood, D.,Moin, S.M.,Andersen, H.,Okuno, Y.,Rao, S.S.,Harris, A.K.,Kwong, P.D.,Mascola, J.R.,Nabel, G.J.,Graham, B.S. Hemagglutinin-stem nanoparticles generate heterosubtypic influenza protection. Nat. Med. 2015 21 1065 1070 5C0S 26301691 Crystal structure of a generation 4 influenza hemagglutinin stabilized stem in complex with the broadly neutralizing antibody CR6261 2015-06-12 2015-09-02 Yassine, H.M.,Boyington, J.C.,McTamney, P.M.,Wei, C.J.,Kanekiyo, M.,Kong, W.P.,Gallagher, J.R.,Wang, L.,Zhang, Y.,Joyce, M.G.,Lingwood, D.,Moin, S.M.,Andersen, H.,Okuno, Y.,Rao, S.S.,Harris, A.K.,Kwong, P.D.,Mascola, J.R.,Nabel, G.J.,Graham, B.S. Hemagglutinin-stem nanoparticles generate heterosubtypic influenza protection. Nat. Med. 2015 21 1065 1070 5BS4 26306007 HIV-1 wild Type protease with GRL-047-11A (a methylamine bis-Tetrahydrofuran P2-Ligand, 4-amino sulfonamide derivative) 2015-06-01 2015-09-09 Ghosh, A.K.,Martyr, C.D.,Osswald, H.L.,Sheri, V.R.,Kassekert, L.A.,Chen, S.,Agniswamy, J.,Wang, Y.F.,Hayashi, H.,Aoki, M.,Weber, I.T.,Mitsuya, H. Design of HIV-1 Protease Inhibitors with Amino-bis-tetrahydrofuran Derivatives as P2-Ligands to Enhance Backbone-Binding Interactions: Synthesis, Biological Evaluation, and Protein-Ligand X-ray Studies. J.Med.Chem. 2015 58 6994 7006 5CG8 26323320 NgTET1 in complex with 5hmC DNA 2015-07-09 2015-09-09 Hashimoto, H.,Pais, J.E.,Dai, N.,Correa, I.R.,Zhang, X.,Zheng, Y.,Cheng, X. Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA. Nucleic Acids Res. 2015 43 10713 10721 4RMC 26331194 Crystal Structure of human retinoid X receptor alpha-ligand binding domain complex with 9cUAB76 and the coactivator peptide GRIP-1 2014-10-21 2015-09-16 Atigadda, V.R.,Xia, G.,Deshpande, A.,Wu, L.,Kedishvili, N.,Smith, C.D.,Krontiras, H.,Bland, K.I.,Grubbs, C.J.,Brouillette, W.J.,Muccio, D.D. Conformationally Defined Rexinoids and Their Efficacy in the Prevention of Mammary Cancers. J.Med.Chem. 2015 58 7763 7774 4RME 26331194 Crystal structure of human Retinoid X receptor alpha ligand binding domain complex with 9cUAB111 and coactivator peptide GRIP-1 2014-10-21 2015-09-16 Atigadda, V.R.,Xia, G.,Deshpande, A.,Wu, L.,Kedishvili, N.,Smith, C.D.,Krontiras, H.,Bland, K.I.,Grubbs, C.J.,Brouillette, W.J.,Muccio, D.D. Conformationally Defined Rexinoids and Their Efficacy in the Prevention of Mammary Cancers. J.Med.Chem. 2015 58 7763 7774 4Y87 26316540 Crystal structure of phosphodiesterase 9 in complex with (R)-C33 (6-{[(1R)-1-(4-chlorophenyl)ethyl]amino}-1-cyclopentyl-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one) 2015-02-16 2015-09-16 Huang, M.,Shao, Y.,Hou, J.,Cui, W.,Liang, B.,Huang, Y.,Li, Z.,Wu, Y.,Zhu, X.,Liu, P.,Wan, Y.,Ke, H.,Luo, H.B. Structural Asymmetry of Phosphodiesterase-9A and a Unique Pocket for Selective Binding of a Potent Enantiomeric Inhibitor. Mol.Pharmacol. 2015 88 836 845 4Y8C 26316540 Crystal structure of phosphodiesterase 9 in complex with (S)-C33 2015-02-16 2015-09-16 Huang, M.,Shao, Y.,Hou, J.,Cui, W.,Liang, B.,Huang, Y.,Li, Z.,Wu, Y.,Zhu, X.,Liu, P.,Wan, Y.,Ke, H.,Luo, H.B. Structural Asymmetry of Phosphodiesterase-9A and a Unique Pocket for Selective Binding of a Potent Enantiomeric Inhibitor. Mol.Pharmacol. 2015 88 836 845 4RMD 26331194 Crystal structure of human Retinoid X receptor alpha ligand binding domain complex with 9cUAB110 and coactivator peptide GRIP-1 2014-10-21 2015-09-23 Atigadda, V.R.,Xia, G.,Deshpande, A.,Wu, L.,Kedishvili, N.,Smith, C.D.,Krontiras, H.,Bland, K.I.,Grubbs, C.J.,Brouillette, W.J.,Muccio, D.D. Conformationally Defined Rexinoids and Their Efficacy in the Prevention of Mammary Cancers. J.Med.Chem. 2015 58 7763 7774 4YWM 26365238 Pyrococcus furiosus MCM N-terminal domain beta-turn triple mutant pentameric ring 2015-03-20 2015-09-23 Froelich, C.A.,Nourse, A.,Enemark, E.J. MCM ring hexamerization is a prerequisite for DNA-binding. Nucleic Acids Res. 2015 43 9553 9563 5BYM 26364903 Crystal structure of the RNA-binding domain of yeast Puf5p bound to SMX2 RNA 2015-06-10 2015-09-23 Wilinski, D.,Qiu, C.,Lapointe, C.P.,Nevil, M.,Campbell, Z.T.,Tanaka Hall, T.M.,Wickens, M. RNA regulatory networks diversified through curvature of the PUF protein scaffold. Nat Commun 2015 6 8213 8213 5BZ5 26364903 Crystal structure of the RNA-binding domain of yeast Puf5p bound to AMN1 RNA 2015-06-11 2015-09-23 Wilinski, D.,Qiu, C.,Lapointe, C.P.,Nevil, M.,Campbell, Z.T.,Tanaka Hall, T.M.,Wickens, M. RNA regulatory networks diversified through curvature of the PUF protein scaffold. Nat Commun 2015 6 8213 8213 5BZV 26364903 Crystal structure of the RNA-binding domain of yeast Puf5p bound to SMX2 RNA 2015-06-11 2015-09-23 Wilinski, D.,Qiu, C.,Lapointe, C.P.,Nevil, M.,Campbell, Z.T.,Tanaka Hall, T.M.,Wickens, M. RNA regulatory networks diversified through curvature of the PUF protein scaffold. Nat Commun 2015 6 8213 8213 5C6R 26365802 Crystal structure of PH domain of ASAP1 2015-06-23 2015-10-07 Jian, X.,Tang, W.K.,Zhai, P.,Roy, N.S.,Luo, R.,Gruschus, J.M.,Yohe, M.E.,Chen, P.W.,Li, Y.,Byrd, R.A.,Xia, D.,Randazzo, P.A. Molecular Basis for Cooperative Binding of Anionic Phospholipids to the PH Domain of the Arf GAP ASAP1. Structure 2015 23 1977 1988 4XUW 26417906 Structure of the hazelnut allergen, Cor a 8 2015-01-26 2015-10-14 Offermann, L.R.,Bublin, M.,Perdue, M.L.,Pfeifer, S.,Dubiela, P.,Borowski, T.,Chruszcz, M.,Hoffmann-Sommergruber, K. Structural and Functional Characterization of the Hazelnut Allergen Cor a 8. J.Agric.Food Chem. 2015 63 9150 9158 4ZWO 26418828 Crystal structure of organophosphate anhydrolase/prolidase mutant Y212F 2015-05-19 2015-10-14 Daczkowski, C.M.,Pegan, S.D.,Harvey, S.P. Engineering the Organophosphorus Acid Anhydrolase Enzyme for Increased Catalytic Efficiency and Broadened Stereospecificity on Russian VX. Biochemistry 2015 54 6423 6433 5CZK 26364932 Structure of E. coli beta-glucuronidase bound with a novel, potent inhibitor 1-((6,8-dimethyl-2-oxo-1,2-dihydroquinolin-3-yl)methyl)-1-(2-hydroxyethyl)-3-(4-hydroxyphenyl)thiourea 2015-07-31 2015-10-14 Wallace, B.D.,Roberts, A.B.,Pollet, R.M.,Ingle, J.D.,Biernat, K.A.,Pellock, S.J.,Venkatesh, M.K.,Guthrie, L.,O'Neal, S.K.,Robinson, S.J.,Dollinger, M.,Figueroa, E.,McShane, S.R.,Cohen, R.D.,Jin, J.,Frye, S.V.,Zamboni, W.C.,Pepe-Ranney, C.,Mani, S.,Kelly, L.,Redinbo, M.R. Structure and Inhibition of Microbiome beta-Glucuronidases Essential to the Alleviation of Cancer Drug Toxicity. Chem.Biol. 2015 22 1238 1249 4PX8 26508639 Structure of P. vulgaris HigB toxin 2014-03-22 2015-10-21 Schureck, M.A.,Dunkle, J.A.,Maehigashi, T.,Miles, S.J.,Dunham, C.M. Defining the mRNA recognition signature of a bacterial toxin protein. Proc.Natl.Acad.Sci.USA 2015 112 13862 13867 4ZPV 26218507 Structure of MERS-Coronavirus Spike Receptor-binding Domain (England1 Strain) in Complex with Vaccine-Elicited Murine Neutralizing Antibody D12 (Crystal Form 2) 2015-05-08 2015-10-21 Wang, L.,Shi, W.,Joyce, M.G.,Modjarrad, K.,Zhang, Y.,Leung, K.,Lees, C.R.,Zhou, T.,Yassine, H.M.,Kanekiyo, M.,Yang, Z.Y.,Chen, X.,Becker, M.M.,Freeman, M.,Vogel, L.,Johnson, J.C.,Olinger, G.,Todd, J.P.,Bagci, U.,Solomon, J.,Mollura, D.J.,Hensley, L.,Jahrling, P.,Denison, M.R.,Rao, S.S.,Subbarao, K.,Kwong, P.D.,Mascola, J.R.,Kong, W.P.,Graham, B.S. Evaluation of candidate vaccine approaches for MERS-CoV. Nat Commun 2015 6 7712 7712 5DGU 26462551 Crystal Structure of HIV-1 Protease Inhibitors Containing Substituted fused-Tetrahydropyranyl Tetrahydrofuran as P2-Ligand GRL-004-11A 2015-08-28 2015-10-28 Ghosh, A.K.,Martyr, C.D.,Kassekert, L.A.,Nyalapatla, P.R.,Steffey, M.,Agniswamy, J.,Wang, Y.F.,Weber, I.T.,Amano, M.,Mitsuya, H. Design, synthesis, biological evaluation and X-ray structural studies of HIV-1 protease inhibitors containing substituted fused-tetrahydropyranyl tetrahydrofuran as P2-ligands. Org.Biomol.Chem. 2015 13 11607 11621 5DGW 26462551 Crystal Structure of HIV-1 Protease Inhibitor GRL-105-11A Containing Substituted fused-Tetrahydropyranyl Tetrahydrofuran as P2-Ligand 2015-08-28 2015-10-28 Ghosh, A.K.,Martyr, C.D.,Kassekert, L.A.,Nyalapatla, P.R.,Steffey, M.,Agniswamy, J.,Wang, Y.F.,Weber, I.T.,Amano, M.,Mitsuya, H. Design, synthesis, biological evaluation and X-ray structural studies of HIV-1 protease inhibitors containing substituted fused-tetrahydropyranyl tetrahydrofuran as P2-ligands. Org.Biomol.Chem. 2015 13 11607 11621 4XTQ 26590639 Crystal structure of a mutant (C20S) of a near-infrared fluorescent protein BphP1-FP 2015-01-23 2015-12-09 Shcherbakova, D.M.,Baloban, M.,Pletnev, S.,Malashkevich, V.N.,Xiao, H.,Dauter, Z.,Verkhusha, V.V. Molecular Basis of Spectral Diversity in Near-Infrared Phytochrome-Based Fluorescent Proteins. Chem.Biol. 2015 22 1540 1551 4PLD 26553876 Human Nuclear Receptor Liver Receptor Homologue-1, LRH-1, in its apo State Bound to a Fragment of Human TIF-2 2014-05-16 2015-12-16 Musille, P.M.,Kossmann, B.R.,Kohn, J.A.,Ivanov, I.,Ortlund, E.A. Unexpected Allosteric Network Contributes to LRH-1 Co-regulator Selectivity. J.Biol.Chem. 2016 291 1411 1426 4XEF 26866573 Pyk2-FAT complexed with Leupaxin LD motif LD1 2014-12-23 2015-12-23 Vanarotti, M.S.,Finkelstein, D.B.,Guibao, C.D.,Nourse, A.,Miller, D.J.,Zheng, J.J. Structural Basis for the Interaction between Pyk2-FAT Domain and Leupaxin LD Repeats. Biochemistry 2016 55 1332 1345 5CBZ 26715749 AncMR DNA Binding Domain - (+)GRE Complex 2015-07-01 2015-12-23 Hudson, W.H.,Kossmann, B.R.,de Vera, I.M.,Chuo, S.W.,Weikum, E.R.,Eick, G.N.,Thornton, J.W.,Ivanov, I.N.,Kojetin, D.J.,Ortlund, E.A. Distal substitutions drive divergent DNA specificity among paralogous transcription factors through subdivision of conformational space. Proc.Natl.Acad.Sci.USA 2016 113 326 331 4XEV 26866573 Fusion of Pyk2-FAT domain with Leupaxin LD1 motif, complexed with Leupaxin LD4 peptide 2014-12-24 2015-12-30 Vanarotti, M.S.,Finkelstein, D.B.,Guibao, C.D.,Nourse, A.,Miller, D.J.,Zheng, J.J. Structural Basis for the Interaction between Pyk2-FAT Domain and Leupaxin LD Repeats. Biochemistry 2016 55 1332 1345 4XKI Human Fibroblast Growth Factor - 1 (FGF-1) mutant S116R 2015-01-12 2016-01-20 Xia, X. Biophysical characterizations of Fibroblast Growth Factor - 1 mutant with increased heparin binding affinity To Be Published 0 0 0 0 4X9X 26774272 Biochemical Roles for Conserved Residues in the Bacterial Fatty Acid Binding Protein Family 2014-12-11 2016-01-27 Broussard, T.C.,Miller, D.J.,Jackson, P.,Nourse, A.,White, S.W.,Rock, C.O. Biochemical Roles for Conserved Residues in the Bacterial Fatty Acid-binding Protein Family. J.Biol.Chem. 2016 291 6292 6303 5C1F 26776521 Structure of the Imp2 F-BAR domain 2015-06-13 2016-01-27 McDonald, N.A.,Takizawa, Y.,Feoktistova, A.,Xu, P.,Ohi, M.D.,Vander Kooi, C.W.,Gould, K.L. The Tubulation Activity of a Fission Yeast F-BAR Protein Is Dispensable for Its Function in Cytokinesis. Cell Rep 2016 14 534 546 4ZWQ 26951671 Crystal Structure of the Bacteriophage T4 recombination mediator protein UvsY, Lattice Type I 2015-05-19 2016-03-02 Gajewski, S.,Waddell, M.B.,Vaithiyalingam, S.,Nourse, A.,Li, Z.,Woetzel, N.,Alexander, N.,Meiler, J.,White, S.W. Structure and mechanism of the phage T4 recombination mediator protein UvsY. Proc.Natl.Acad.Sci.USA 2016 113 3275 3280 5CCY 26976575 2009 H1N1 PA endonuclease in complex with dTMP 2015-07-02 2016-03-16 Song, M.S.,Kumar, G.,Shadrick, W.R.,Zhou, W.,Jeevan, T.,Li, Z.,Slavish, P.J.,Fabrizio, T.P.,Yoon, S.W.,Webb, T.R.,Webby, R.J.,White, S.W. Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor. Proc.Natl.Acad.Sci.USA 2016 113 3669 3674 5CL0 26976575 2009 H1N1 PA endonuclease in complex with rUMP 2015-07-15 2016-03-16 Song, M.S.,Kumar, G.,Shadrick, W.R.,Zhou, W.,Jeevan, T.,Li, Z.,Slavish, P.J.,Fabrizio, T.P.,Yoon, S.W.,Webb, T.R.,Webby, R.J.,White, S.W. Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor. Proc.Natl.Acad.Sci.USA 2016 113 3669 3674 5CGV 26976575 2009 H1N1 PA endonuclease in complex with L-742,001 2015-07-09 2016-03-23 Song, M.S.,Kumar, G.,Shadrick, W.R.,Zhou, W.,Jeevan, T.,Li, Z.,Slavish, P.J.,Fabrizio, T.P.,Yoon, S.W.,Webb, T.R.,Webby, R.J.,White, S.W. Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor. Proc. Natl. Acad. Sci. U.S.A. 2016 113 3669 3674 5I3X 26978477 Crystal structure of BACE1 in complex with aminoquinoline inhibitor 6 2016-02-11 2016-03-30 Jordan, J.B.,Whittington, D.A.,Bartberger, M.D.,Sickmier, E.A.,Chen, K.,Cheng, Y.,Judd, T. Fragment-Linking Approach Using (19)F NMR Spectroscopy To Obtain Highly Potent and Selective Inhibitors of beta-Secretase. J.Med.Chem. 2016 59 3732 3749 5I3Y 26978477 Crystal structure of BACE1 in complex with aminoquinoline inhibitor 9 2016-02-11 2016-03-30 Jordan, J.B.,Whittington, D.A.,Bartberger, M.D.,Sickmier, E.A.,Chen, K.,Cheng, Y.,Judd, T. Fragment-Linking Approach Using (19)F NMR Spectroscopy To Obtain Highly Potent and Selective Inhibitors of beta-Secretase. J.Med.Chem. 2016 59 3732 3749 5HUF 27053557 The crystal structure of hemagglutinin from A/gyrfalcon/Washington/41088-6/2014 influenza virus 2016-01-27 2016-04-13 Yang, H.,Carney, P.J.,Mishin, V.P.,Guo, Z.,Chang, J.C.,Wentworth, D.E.,Gubareva, L.V.,Stevens, J. Molecular Characterizations of Surface Proteins Hemagglutinin and Neuraminidase from Recent H5Nx Avian Influenza Viruses. J.Virol. 2016 90 5770 5784 5F6D 27038327 Crystal structure of Ubc9 (K48A/K49A/E54A) complexed with Fragment 6 2015-12-05 2016-04-27 Hewitt, W.M.,Lountos, G.T.,Zlotkowski, K.,Dahlhauser, S.D.,Saunders, L.B.,Needle, D.,Tropea, J.E.,Zhan, C.,Wei, G.,Ma, B.,Nussinov, R.,Waugh, D.S.,Schneekloth, J.S. Insights Into the Allosteric Inhibition of the SUMO E2 Enzyme Ubc9. Angew.Chem.Int.Ed.Engl. 2016 55 5703 5707 5F6U 27038327 Crystal Structure of Ubc9 (K48A/K49A/E54A) complexed with Fragment 8 (JSS190B146) 2015-12-07 2016-04-27 Hewitt, W.M.,Lountos, G.T.,Zlotkowski, K.,Dahlhauser, S.D.,Saunders, L.B.,Needle, D.,Tropea, J.E.,Zhan, C.,Wei, G.,Ma, B.,Nussinov, R.,Waugh, D.S.,Schneekloth, J.S. Insights Into the Allosteric Inhibition of the SUMO E2 Enzyme Ubc9. Angew.Chem.Int.Ed.Engl. 2016 55 5703 5707 5HN2 27079978 Base Pairing and Structure Insights into the 5-Formylcytosine in RNA Duplex 2016-01-18 2016-04-27 Wang, R.,Luo, Z.,He, K.,Delaney, M.O.,Chen, D.,Sheng, J. Base pairing and structural insights into the 5-formylcytosine in RNA duplex. Nucleic Acids Res. 2016 44 4968 4977 5HNJ 27079978 Base Pairing and Structure Insights into the 5-Formylcytosine in RNA Duplex 2016-01-18 2016-04-27 Wang, R.,Luo, Z.,He, K.,Delaney, M.O.,Chen, D.,Sheng, J. Base pairing and structural insights into the 5-formylcytosine in RNA duplex. Nucleic Acids Res. 2016 44 4968 4977 5HNQ 27079978 Base Pairing and Structure Insights into the 5-Formylcytosine in RNA Duplex 2016-01-18 2016-04-27 Wang, R.,Luo, Z.,He, K.,Delaney, M.O.,Chen, D.,Sheng, J. Base pairing and structural insights into the 5-formylcytosine in RNA duplex. Nucleic Acids Res. 2016 44 4968 4977 5IN9 27003516 Crystal structure of Grp94 bound to methyl 3-chloro-2-(2-(1-((5-chlorofuran-2-yl)methyl)-1H-imidazol-2-yl)ethyl)-4,6-dihydroxybenzoate, an inhibitor based on the BnIm and Radamide scaffolds. 2016-03-07 2016-05-04 Crowley, V.M.,Khandelwal, A.,Mishra, S.,Stothert, A.R.,Huard, D.J.,Zhao, J.,Muth, A.,Duerfeldt, A.S.,Kizziah, J.L.,Lieberman, R.L.,Dickey, C.A.,Blagg, B.S. Development of Glucose Regulated Protein 94-Selective Inhibitors Based on the BnIm and Radamide Scaffold. J.Med.Chem. 2016 59 3471 3488 5H9K 27124118 Crystal of a leukotriene-binding salivary lipocalin 2015-12-28 2016-05-11 Jablonka, W.,Pham, V.,Nardone, G.,Gittis, A.,Silva-Cardoso, L.,Atella, G.C.,Ribeiro, J.M.,Andersen, J.F. Structure and Ligand-Binding Mechanism of a Cysteinyl Leukotriene-Binding Protein from a Blood-Feeding Disease Vector. Acs Chem.Biol. 2016 11 1934 1944 5E6G 27151863 Crystal Structure of De Novo Designed Protein CA01 2015-10-09 2016-05-18 Jacobs, T.M.,Williams, B.,Williams, T.,Xu, X.,Eletsky, A.,Federizon, J.F.,Szyperski, T.,Kuhlman, B. Design of structurally distinct proteins using strategies inspired by evolution. Science 2016 352 687 690 5EM1 27231348 Crystal structure of ragweed allergen Amb a 8 2015-11-05 2016-06-08 Offermann, L.R.,Schlachter, C.R.,Perdue, M.L.,Majorek, K.A.,He, J.Z.,Booth, W.T.,Garrett, J.,Kowal, K.,Chruszcz, M. Structural, Functional, and Immunological Characterization of Profilin Panallergens Amb a 8, Art v 4, and Bet v 2. J.Biol.Chem. 2016 291 15447 15459 5DXL 27307435 Structure of Aspergillus fumigatus trehalose-6-phosphate phosphatase crystal form 1 2015-09-23 2016-06-15 Miao, Y.,Tenor, J.L.,Toffaletti, D.L.,Washington, E.J.,Liu, J.,Shadrick, W.R.,Schumacher, M.A.,Lee, R.E.,Perfect, J.R.,Brennan, R.G. Structures of trehalose-6-phosphate phosphatase from pathogenic fungi reveal the mechanisms of substrate recognition and catalysis. Proc.Natl.Acad.Sci.USA 2016 113 7148 7153 5KFD 27284197 Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 300s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KFE 27284197 Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 600s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KFF 27284197 Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 1800s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KFJ 27284197 Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 180s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KFK 27284197 Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 300s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KFT 27284197 Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 40s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KFU 27284197 Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 80s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KFV 27284197 Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 140s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KFW 27284197 Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 200s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KFX 27284197 Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 300s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KFY 27284197 Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 4 degree 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KFZ 27284197 Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 14 degree 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KG1 27284197 Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 30 degree 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KG2 27284197 Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 37 degree 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KG3 27284197 Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Mn2+ for 60s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KG4 27284197 Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Mg2+ for 60s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KG5 27284197 Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Cd2+ for 60s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KG7 27284197 Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Zn2+ for 60s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5L9X 27284197 Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 60s 2016-06-12 2016-06-22 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5JX3 27684934 Wild type D4 in orthorhombic space group 2016-05-12 2016-06-29 Schormann, N.,Zhukovskaya, N.,Bedwell, G.,Nuth, M.,Gillilan, R.,Prevelige, P.E.,Ricciardi, R.P.,Banerjee, S.,Chattopadhyay, D. Poxvirus uracil-DNA glycosylase-An unusual member of the family I uracil-DNA glycosylases. Protein Sci. 2016 25 2113 2131 5KFG 27284197 Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 30s 2016-06-12 2016-06-29 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KFI 27284197 Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 120s 2016-06-12 2016-06-29 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KFS 27284197 Human DNA polymerase eta R61A-DNA ternary complex: ground state at pH7.0 (K+ MES) with 1 Ca2+ ion 2016-06-12 2016-06-29 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KG0 27284197 Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 22 degree 2016-06-12 2016-06-29 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 5KG6 27284197 Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Ca2+ for 60s 2016-06-12 2016-06-29 Gao, Y.,Yang, W. Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science 2016 352 1334 1337 4YDE CRYSTAL STRUCTURE OF CANDIDA ALBICANS PROTEIN FARNESYLTRANSFERASE BINARY COMPLEX WITH THE ISOPRENOID FARNESYLDIPHOSPHATE 2015-02-22 2016-07-06 Kumar, S.,Mabanglo, M.F.,Hast, M.A.,Shi, Y.,Beese, L.S. CRYSTAL STRUCTURE OF CANDIDA ALBICANS PROTEIN FARNESYLTRANSFERASE BINARY COMPLEX WITH THE ISOPRENOID FARNESYLDIPHOSPHATE To Be Published 0 0 0 0 4YDO CRYSTAL STRUCTURE OF CANDIDA ALBICANS PROTEIN FARNESYLTRANSFERASE IN APO FORM 2015-02-22 2016-07-06 Kumar, S.,Mabanglo, M.F.,Hast, M.A.,Shi, Y.,Beese, L.S. CRYSTAL STRUCTURE OF CANDIDA ALBICANS PROTEIN FARNESYLTRANSFERASE IN APO FORM To Be Published 0 0 0 0 5IY0 27380371 PfMCM N-terminal domain double hexamer 2016-03-23 2016-07-13 Meagher, M.,Enemark, E.J. Structure of a double hexamer of the Pyrococcus furiosus minichromosome maintenance protein N-terminal domain. Acta Crystallogr.,Sect.F 2016 72 545 551 5JNY 27299673 Crystal Structure of 10E8 Fab 2016-05-01 2016-07-13 Soto, C.,Ofek, G.,Joyce, M.G.,Zhang, B.,McKee, K.,Longo, N.S.,Yang, Y.,Huang, J.,Parks, R.,Eudailey, J.,Lloyd, K.E.,Alam, S.M.,Haynes, B.F.,Mullikin, J.C.,Connors, M.,Mascola, J.R.,Shapiro, L.,Kwong, P.D. Developmental Pathway of the MPER-Directed HIV-1-Neutralizing Antibody 10E8. Plos One 2016 11 0 0 5KIV 27345688 Crystal structure of SauMacro (SAV0325) 2016-06-17 2016-07-13 Appel, C.D.,Feld, G.K.,Wallace, B.D.,Williams, R.S. Structure of the sirtuin-linked macrodomain SAV0325 from Staphylococcus aureus. Protein Sci. 2016 25 1682 1691 5DQB Green/cyan WasCFP at pH 8.0 2015-09-14 2016-07-27 Pletnev, V.Z.,Pletneva, N.,Efremov, R.G.,Goryacheva, E.A.,Artemyev, I.V.,Arkhipova, S.F.,Sarkisyan, K.S.,Mishin, A.S.,Lukyanov, K.A.,Pletnev, S.V. Crystal structure of pH and T dependent green fluorescent protein WasCFP with Trp based chromophore Russ.J.Bioorganic Chem. 2016 42 0 0 5DQM Green/cyan WasCFP at pH 2.0 2015-09-14 2016-07-27 Pletnev, V.Z.,Pletneva, N.,Efremov, R.G.,Goryacheva, E.A.,Artemyev, I.V.,Arkhipova, S.F.,Sarkisyan, K.S.,Mishin, A.S.,Lukyanov, K.A.,Pletnev, S.V. Crystal structure of pH and T dependent green fluorescent protein WasCFP with Trp based chromophore Russ.J.Bioorganic Chem. 2016 42 0 0 5DRF Green/cyan WasCFP-pH5.5 at pH 5.5 2015-09-15 2016-07-27 Pletnev, V.Z.,Pletneva, N.,Efremov, R.G.,Goryacheva, E.A.,Artemyev, I.V.,Arkhipova, S.F.,Sarkisyan, K.S.,Mishin, A.S.,Lukyanov, K.A.,Pletnev, S.V. Crystal structure of pH and T dependent green fluorescent protein WasCFP with Trp based chromophore Russ.J.Bioorganic Chem. 2016 42 0 0 5DRG Green/cyan WasCFP at pH 10.0 2015-09-15 2016-07-27 Pletnev, V.Z.,Pletneva, N.,Efremov, R.G.,Goryacheva, E.A.,Artemyev, I.V.,Arkhipova, S.F.,Sarkisyan, K.S.,Mishin, A.S.,Lukyanov, K.A.,Pletnev, S.V. Crystal structure of pH and T dependent green fluorescent protein WasCFP with Trp based chromophore Russ.J.Bioorganic Chem. 2016 42 0 0 5IVV 27427228 Linked KDM5A Jmj Domain Bound to the Inhibitor N12 [3-((1-methyl-1H-pyrrolo[2,3-b]pyridin-3-yl)amino)isonicotinic acid] 2016-03-21 2016-07-27 Horton, J.R.,Liu, X.,Gale, M.,Wu, L.,Shanks, J.R.,Zhang, X.,Webber, P.J.,Bell, J.S.,Kales, S.C.,Mott, B.T.,Rai, G.,Jansen, D.J.,Henderson, M.J.,Urban, D.J.,Hall, M.D.,Simeonov, A.,Maloney, D.J.,Johns, M.A.,Fu, H.,Jadhav, A.,Vertino, P.M.,Yan, Q.,Cheng, X. Structural Basis for KDM5A Histone Lysine Demethylase Inhibition by Diverse Compounds. Cell Chem Biol 2016 23 769 781 4Y2L 27627030 Structure of CFA/I pili major subunit CfaB trimer 2015-02-10 2016-08-10 Bao, R.,Liu, Y.,Savarino, S.J.,Xia, D. Off-pathway assembly of fimbria subunits is prevented by chaperone CfaA of CFA/I fimbriae from enterotoxigenic E. coli. Mol. Microbiol. 2016 102 975 991 4Y2N 27627030 Structure of CFA/I pili major subunit CfaB trimer 2015-02-10 2016-08-10 Bao, R.,Liu, Y.,Savarino, S.J.,Xia, D. Off-pathway assembly of fimbria subunits is prevented by chaperone CfaA of CFA/I fimbriae from enterotoxigenic E. coli. Mol. Microbiol. 2016 102 975 991 4Y2O 27627030 Structure of CFA/I pili chaperone-major subunit complex (CfaA-CfaB) 2015-02-10 2016-08-10 Bao, R.,Liu, Y.,Savarino, S.J.,Xia, D. Off-pathway assembly of fimbria subunits is prevented by chaperone CfaA of CFA/I fimbriae from enterotoxigenic E. coli. Mol. Microbiol. 2016 102 975 991 5DGH 27460418 Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with AMP-PNP and 5-(PCP)-IP5 2015-08-27 2016-08-10 Hager, A.,Wu, M.,Wang, H.,Brown, N.W.,Shears, S.B.,Veiga, N.,Fiedler, D. Cellular Cations Control Conformational Switching of Inositol Pyrophosphate Analogues. Chemistry 2016 22 12406 12414 5DGI 27460418 Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with ADP and 3,5-(PCP)2-IP4 2015-08-27 2016-08-10 Hager, A.,Wu, M.,Wang, H.,Brown, N.W.,Shears, S.B.,Veiga, N.,Fiedler, D. Cellular Cations Control Conformational Switching of Inositol Pyrophosphate Analogues. Chemistry 2016 22 12406 12414 5JQ9 27423480 Yersinia pestis DHPS with pterine-sulfa conjugate Compound 16 2016-05-04 2016-08-10 Zhao, Y.,Shadrick, W.R.,Wallace, M.J.,Wu, Y.,Griffith, E.C.,Qi, J.,Yun, M.K.,White, S.W.,Lee, R.E. Pterin-sulfa conjugates as dihydropteroate synthase inhibitors and antibacterial agents. Bioorg.Med.Chem.Lett. 2016 26 3950 3954 5CU1 Crystal structure of DMSP lyase DddQ from Ruegeria pomeroyi DSS-3 2015-07-24 2016-08-17 Chong, S.Y.,Lanzilotta, W.N. To be Published To Be Published 0 0 0 0 5KR7 27476424 KDM4C bound to pyrazolo-pyrimidine scaffold 2016-07-07 2016-08-17 Gehling, V.S.,Bellon, S.F.,Harmange, J.C.,LeBlanc, Y.,Poy, F.,Odate, S.,Buker, S.,Lan, F.,Arora, S.,Williamson, K.E.,Sandy, P.,Cummings, R.T.,Bailey, C.M.,Bergeron, L.,Mao, W.,Gustafson, A.,Liu, Y.,VanderPorten, E.,Audia, J.E.,Trojer, P.,Albrecht, B.K. Identification of potent, selective KDM5 inhibitors. Bioorg.Med.Chem.Lett. 2016 26 4350 4354 5E4S 27539848 Crystal structure of mouse CNTN4 FN1-FN3 domains 2015-10-07 2016-08-31 Nikolaienko, R.M.,Hammel, M.,Dubreuil, V.,Zalmai, R.,Hall, D.R.,Mehzabeen, N.,Karuppan, S.J.,Harroch, S.,Stella, S.L.,Bouyain, S. Structural Basis for Interactions Between Contactin Family Members and Protein-tyrosine Phosphatase Receptor Type G in Neural Tissues. J.Biol.Chem. 2016 291 21335 21349 5E5U 27539848 Crystal structure of the complex between Carbonic anhydrase-like domain of PTPRG and Immunoglobulin domains 2-3 of CNTN6 2015-10-09 2016-08-31 Nikolaienko, R.M.,Hammel, M.,Dubreuil, V.,Zalmai, R.,Hall, D.R.,Mehzabeen, N.,Karuppan, S.J.,Harroch, S.,Stella, S.L.,Bouyain, S. Structural Basis for Interactions Between Contactin Family Members and Protein-tyrosine Phosphatase Receptor Type G in Neural Tissues. J.Biol.Chem. 2016 291 21335 21349 5JUE 27487928 Crystal Structure of UIC2 Fab 2016-05-10 2016-08-31 Esser, L.,Shukla, S.,Zhou, F.,Ambudkar, S.V.,Xia, D. Crystal structure of the antigen-binding fragment of a monoclonal antibody specific for the multidrug-resistance-linked ABC transporter human P-glycoprotein. Acta Crystallogr.,Sect.F 2016 72 636 641 5L0C 27503891 Human metavinculin (residues 959-1134) in complex with PIP2 2016-07-27 2016-08-31 Chinthalapudi, K.,Rangarajan, E.S.,Brown, D.T.,Izard, T. Differential lipid binding of vinculin isoforms promotes quasi-equivalent dimerization. Proc.Natl.Acad.Sci.USA 2016 113 9539 9544 5L0F 27503891 Human metavinculin quadruple mutant (residues 959-1134) 2016-07-27 2016-08-31 Chinthalapudi, K.,Rangarajan, E.S.,Brown, D.T.,Izard, T. Differential lipid binding of vinculin isoforms promotes quasi-equivalent dimerization. Proc.Natl.Acad.Sci.USA 2016 113 9539 9544 5HW6 27118592 Candida albicans FKBP12 apo protein in C2 space group 2016-01-28 2016-09-14 Tonthat, N.K.,Juvvadi, P.R.,Zhang, H.,Lee, S.C.,Venters, R.,Spicer, L.,Steinbach, W.J.,Heitman, J.,Schumacher, M.A. Structures of Pathogenic Fungal FKBP12s Reveal Possible Self-Catalysis Function. Mbio 2016 7 0 0 5HW7 27118592 Candida albicans FKBP12 apo protein in P21212 space group 2016-01-28 2016-09-14 Tonthat, N.K.,Juvvadi, P.R.,Zhang, H.,Lee, S.C.,Venters, R.,Spicer, L.,Steinbach, W.J.,Heitman, J.,Schumacher, M.A. Structures of Pathogenic Fungal FKBP12s Reveal Possible Self-Catalysis Function. Mbio 2016 7 0 0 5HW8 27118592 Candida albicans FKBP12 P104G protein bound with FK506 in C2 space group 2016-01-28 2016-09-14 Tonthat, N.K.,Juvvadi, P.R.,Zhang, H.,Lee, S.C.,Venters, R.,Spicer, L.,Steinbach, W.J.,Heitman, J.,Schumacher, M.A. Structures of Pathogenic Fungal FKBP12s Reveal Possible Self-Catalysis Function. Mbio 2016 7 0 0 5HWB 27118592 Aspergillus fumigatus FKBP12 apo protein in P212121 space group 2016-01-28 2016-09-14 Tonthat, N.K.,Juvvadi, P.R.,Zhang, H.,Lee, S.C.,Venters, R.,Spicer, L.,Steinbach, W.J.,Heitman, J.,Schumacher, M.A. Structures of Pathogenic Fungal FKBP12s Reveal Possible Self-Catalysis Function. Mbio 2016 7 0 0 5KE6 27596594 mouse Klf4 ZnF1-3 and TpG/CpA sequence DNA complex structure 2016-06-09 2016-09-14 Hashimoto, H.,Wang, D.,Steves, A.N.,Jin, P.,Blumenthal, R.M.,Zhang, X.,Cheng, X. Distinctive Klf4 mutants determine preference for DNA methylation status. Nucleic Acids Res. 2016 44 10177 10185 5KE7 27596594 mouse Klf4 ZnF1-3 and TpG/MpA sequence DNA complex structure 2016-06-09 2016-09-14 Hashimoto, H.,Wang, D.,Steves, A.N.,Jin, P.,Blumenthal, R.M.,Zhang, X.,Cheng, X. Distinctive Klf4 mutants determine preference for DNA methylation status. Nucleic Acids Res. 2016 44 10177 10185 5KL5 27596598 Wilms Tumor Protein (WT1) ZnF2-4 Q369H in complex with carboxylated DNA 2016-06-23 2016-09-14 Hashimoto, H.,Zhang, X.,Zheng, Y.,Wilson, G.G.,Cheng, X. Denys-Drash syndrome associated WT1 glutamine 369 mutants have altered sequence-preferences and altered responses to epigenetic modifications. Nucleic Acids Res. 2016 44 10165 10176 5KL7 27596598 Wilms Tumor Protein (WT1) ZnF2-4Q369R in complex with carboxylated DNA 2016-06-23 2016-09-14 Hashimoto, H.,Zhang, X.,Zheng, Y.,Wilson, G.G.,Cheng, X. Denys-Drash syndrome associated WT1 glutamine 369 mutants have altered sequence-preferences and altered responses to epigenetic modifications. Nucleic Acids Res. 2016 44 10165 10176 5JFU 27389367 HIV-1 wild Type protease with GRL-007-14A (a Adamantane P1-Ligand with bis-THF in P2 and benzylamine in P1') 2016-04-19 2016-09-21 Ghosh, A.K.,Osswald, H.L.,Glauninger, K.,Agniswamy, J.,Wang, Y.F.,Hayashi, H.,Aoki, M.,Weber, I.T.,Mitsuya, H. Probing Lipophilic Adamantyl Group as the P1-Ligand for HIV-1 Protease Inhibitors: Design, Synthesis, Protein X-ray Structural Studies, and Biological Evaluation. J.Med.Chem. 2016 59 6826 6837 5EKI 27617343 Crystal Structure of Truncated CCL21 2015-11-03 2016-10-05 Smith, E.W.,Lewandowski, E.M.,Moussouras, N.A.,Kroeck, K.G.,Volkman, B.F.,Veldkamp, C.T.,Chen, Y. Crystallographic Structure of Truncated CCL21 and the Putative Sulfotyrosine-Binding Site. Biochemistry 2016 55 5746 5753 5JCU 27684484 Crystal Structure of hGSTA1-1 with Glutathione Adduct of Phenethyl Isothiocyanate and Cystein Adduct of Phenethyl Isothiocyanate 2016-04-15 2016-10-12 Kumari, V.,Dyba, M.A.,Holland, R.J.,Liang, Y.H.,Singh, S.V.,Ji, X. Irreversible Inhibition of Glutathione S-Transferase by Phenethyl Isothiocyanate (PEITC), a Dietary Cancer Chemopreventive Phytochemical. Plos One 2016 11 0 0 5JCW 27684484 Crystal Structure of hGSTP1-1 with Glutathione Adduct of Phenethyl Isothiocyanate 2016-04-15 2016-10-12 Kumari, V.,Dyba, M.A.,Holland, R.J.,Liang, Y.H.,Singh, S.V.,Ji, X. Irreversible Inhibition of Glutathione S-Transferase by Phenethyl Isothiocyanate (PEITC), a Dietary Cancer Chemopreventive Phytochemical. Plos One 2016 11 0 0 5KKZ 27758861 Rhodobacter sphaeroides bc1 with famoxadone 2016-06-23 2016-10-12 Esser, L.,Zhou, F.,Zhou, Y.,Xiao, Y.,Tang, W.K.,Yu, C.A.,Qin, Z.,Xia, D. Hydrogen Bonding to the Substrate Is Not Required for Rieske Iron-Sulfur Protein Docking to the Quinol Oxidation Site of Complex III. J.Biol.Chem. 2016 291 25019 25031 5JXU 29308294 Structural basis for the catalytic activity of Thermomonospora curvata heme-containing DyP-type peroxidase. 2016-05-13 2016-10-19 Shrestha, R.,Chen, X.,Ramyar, K.X.,Hayati, Z.,Carlson, E.A.,Bossmann, S.H.,Song, L.,Geisbrecht, B.V.,Li, P. Identification of Surface-Exposed Protein Radicals and A Substrate Oxidation Site in A-Class Dye-Decolorizing Peroxidase from Thermomonospora curvata. ACS Catal 2016 6 8036 8047 5JZE 27412597 Erve virus viral OTU domain protease in complex with mouse ISG15 2016-05-16 2016-10-19 Deaton, M.K.,Dzimianski, J.V.,Daczkowski, C.M.,Whitney, G.K.,Mank, N.J.,Parham, M.M.,Bergeron, E.,Pegan, S.D. Biochemical and Structural Insights into the Preference of Nairoviral DeISGylases for Interferon-Stimulated Gene Product 15 Originating from Certain Species. J.Virol. 2016 90 8314 8327 5I9B 27681633 Caspase 3 V266A 2016-02-19 2016-10-26 Maciag, J.J.,Mackenzie, S.H.,Tucker, M.B.,Schipper, J.L.,Swartz, P.,Clark, A.C. Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection. Proc.Natl.Acad.Sci.USA 2016 113 0 0 5I9T 27681633 Caspase 3 V266C 2016-02-20 2016-10-26 Maciag, J.J.,Mackenzie, S.H.,Tucker, M.B.,Schipper, J.L.,Swartz, P.,Clark, A.C. Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection. Proc.Natl.Acad.Sci.USA 2016 113 0 0 5IAB 27681633 Caspase 3 V266D 2016-02-21 2016-10-26 Maciag, J.J.,Mackenzie, S.H.,Tucker, M.B.,Schipper, J.L.,Swartz, P.,Clark, A.C. Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection. Proc.Natl.Acad.Sci.USA 2016 113 0 0 5IAE 27681633 Caspase 3 V266F 2016-02-21 2016-10-26 Maciag, J.J.,Mackenzie, S.H.,Tucker, M.B.,Schipper, J.L.,Swartz, P.,Clark, A.C. Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection. Proc.Natl.Acad.Sci.USA 2016 113 0 0 5IAJ 27681633 Caspase 3 V266L 2016-02-21 2016-10-26 Maciag, J.J.,Mackenzie, S.H.,Tucker, M.B.,Schipper, J.L.,Swartz, P.,Clark, A.C. Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection. Proc.Natl.Acad.Sci.USA 2016 113 0 0 5IAK 27681633 Caspase 3 V266S 2016-02-21 2016-10-26 Maciag, J.J.,Mackenzie, S.H.,Tucker, M.B.,Schipper, J.L.,Swartz, P.,Clark, A.C. Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection. Proc.Natl.Acad.Sci.USA 2016 113 0 0 5IAR 27681633 Caspase 3 V266W 2016-02-21 2016-10-26 Maciag, J.J.,Mackenzie, S.H.,Tucker, M.B.,Schipper, J.L.,Swartz, P.,Clark, A.C. Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection. Proc.Natl.Acad.Sci.USA 2016 113 0 0 5IBC 27681633 Caspase 3 V266I 2016-02-22 2016-10-26 Maciag, J.J.,Mackenzie, S.H.,Tucker, M.B.,Schipper, J.L.,Swartz, P.,Clark, A.C. Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection. Proc.Natl.Acad.Sci.USA 2016 113 0 0 5IBP 27681633 Caspase 3 V266M 2016-02-22 2016-10-26 Maciag, J.J.,Mackenzie, S.H.,Tucker, M.B.,Schipper, J.L.,Swartz, P.,Clark, A.C. Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection. Proc.Natl.Acad.Sci.USA 2016 113 0 0 5IBR 27681633 Caspase 3 V266K 2016-02-22 2016-10-26 Maciag, J.J.,Mackenzie, S.H.,Tucker, M.B.,Schipper, J.L.,Swartz, P.,Clark, A.C. Tunable allosteric library of caspase-3 identifies coupling between conserved water molecules and conformational selection. Proc.Natl.Acad.Sci.USA 2016 113 0 0 5K6D 27819327 Structure of FS50 an antagonist of NaV1.5 2016-05-24 2016-11-23 Xu, X.,Zhang, B.,Yang, S.,An, S.,Ribeiro, J.M.,Andersen, J.F. Structure and Function of FS50, a salivary protein from the flea Xenopsylla cheopis that blocks the sodium channel NaV1.5. Sci Rep 2016 6 36574 36574 5EVJ X-ray crystal structure of CrArsM, an arsenic (III) S-adenosylmethionine methyltransferase from Chlamydomonas reinhardtii 2015-11-19 2016-11-30 Packianathan, C.,Kandavelu, P.,Sankaran, B.,Rosen, B.P. Crystal structure of CrArsM, an arsenic (III) S-adenosylmethionine methyltransferase from Chlamydomonas reinhardtii To Be Published 0 0 0 0 5T3F 27841370 hen egg-white lysozyme soaked with selenourea for 10 min 2016-08-25 2016-11-30 Luo, Z. Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures. Sci Rep 2016 6 37123 37123 5T3G 27841370 thaumatin soaked with selenourea for 10 min 2016-08-25 2016-11-30 Luo, Z. Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures. Sci Rep 2016 6 37123 37123 5T3H 27841370 bovine trypsin soaked with selenourea for 5 min 2016-08-25 2016-11-30 Luo, Z. Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures. Sci Rep 2016 6 37123 37123 5T3J 27841370 Histidinol Phosphate Phosphatase(HPP) soaked with selenourea for 10 min 2016-08-25 2016-11-30 Luo, Z. Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures. Sci Rep 2016 6 37123 37123 5HPJ 27936100 Photobacterium profundum alpha-carbonic anhydrase 2016-01-20 2016-12-07 Somalinga, V.,Buhrman, G.,Arun, A.,Rose, R.B.,Grunden, A.M. A High-Resolution Crystal Structure of a Psychrohalophilic alpha-Carbonic Anhydrase from Photobacterium profundum Reveals a Unique Dimer Interface. PLoS ONE 2016 11 0 0 5KKB 27856750 Structure of mouse Golgi alpha-1,2-mannosidase IA and Man9GlcNAc2-PA complex 2016-06-21 2016-12-07 Xiang, Y.,Karaveg, K.,Moremen, K.W. Substrate recognition and catalysis by GH47 alpha-mannosidases involved in Asn-linked glycan maturation in the mammalian secretory pathway. Proc. Natl. Acad. Sci. U.S.A. 2016 113 0 0 5FFQ 27791000 ChuY: An Anaerobillin Reductase from Escherichia coli O157:H7 2015-12-18 2017-01-11 LaMattina, J.W.,Nix, D.B.,Lanzilotta, W.N. Radical new paradigm for heme degradation in Escherichia coli O157:H7. Proc. Natl. Acad. Sci. U.S.A. 2016 113 12138 12143 5K0K 27994735 Crystal structure of the catalytic domain of the proto-oncogene tyrosine-protein kinase MER in complex with inhibitor UNC2434 2016-05-17 2017-01-11 Wang, X.,Liu, J.,Zhang, W.,Stashko, M.A.,Nichols, J.,Miley, M.J.,Norris-Drouin, J.,Chen, Z.,Machius, M.,DeRyckere, D.,Wood, E.,Graham, D.K.,Earp, H.S.,Kireev, D.,Frye, S.V. Design and Synthesis of Novel Macrocyclic Mer Tyrosine Kinase Inhibitors. ACS Med Chem Lett 2016 7 1044 1049 5HJZ Structure of M. tuberculosis MazF-mt1 (Rv2801c) in complex with RNA 2016-01-13 2017-01-18 Yen, T.J.,Brennan, R.G. Structure of M. tuberculosis MazF-mt1 (Rv2801c) in complex with RNA To Be Published 0 0 0 0 5HKC Crystal structure of M. tuberculosis MazF-mt3 T52D-F62D mutant in complex with 8-mer RNA 2016-01-14 2017-01-18 Yen, T.J.,Brennan, R.G. Crystal structure of M. tuberculosis MazF-mt3 T52D-F62D mutant in complex with 8-mer RNA To Be Published 0 0 0 0 5HM6 29438671 N-terminal domain of BfmR from Acinetobacter baumannii 2016-01-15 2017-01-18 Draughn, G.L.,Milton, M.E.,Feldmann, E.A.,Bobay, B.G.,Roth, B.M.,Olson, A.L.,Thompson, R.J.,Actis, L.A.,Davies, C.,Cavanagh, J. The Structure of the Biofilm-controlling Response Regulator BfmR from Acinetobacter baumannii Reveals Details of Its DNA-binding Mechanism. J. Mol. Biol. 2018 0 0 0 5HUO 28618168 Crystal Structure of NadC Deletion Mutant in C2221 Space Group 2016-01-27 2017-01-25 Booth, W.T.,Morris, T.L.,Mysona, D.P.,Shah, M.J.,Taylor, L.K.,Karlin, T.W.,Clary, K.,Majorek, K.A.,Offermann, L.R.,Chruszcz, M. Streptococcus pyogenes quinolinate-salvage pathway-structural and functional studies of quinolinate phosphoribosyl transferase and NH3 -dependent NAD(+) synthetase. FEBS J. 2017 284 2425 2441 5F60 28336808 Crystal structure of the first bromodomain of human BRD4 in complex with SG3-014 2015-12-04 2017-02-08 Ember, S.W.,Lambert, Q.T.,Berndt, N.,Gunawan, S.,Ayaz, M.,Tauro, M.,Zhu, J.Y.,Cranfill, P.J.,Greninger, P.,Lynch, C.C.,Benes, C.H.,Lawrence, H.R.,Reuther, G.W.,Lawrence, N.J.,Schonbrunn, E. Potent Dual BET Bromodomain-Kinase Inhibitors as Value-Added Multitargeted Chemical Probes and Cancer Therapeutics. Mol. Cancer Ther. 2017 16 1054 1067 5F61 28336808 Crystal structure of the first bromodomain of human BRD4 in complex with MA4-022-1 2015-12-04 2017-02-08 Ember, S.W.,Lambert, Q.T.,Berndt, N.,Gunawan, S.,Ayaz, M.,Tauro, M.,Zhu, J.Y.,Cranfill, P.J.,Greninger, P.,Lynch, C.C.,Benes, C.H.,Lawrence, H.R.,Reuther, G.W.,Lawrence, N.J.,Schonbrunn, E. Potent Dual BET Bromodomain-Kinase Inhibitors as Value-Added Multitargeted Chemical Probes and Cancer Therapeutics. Mol. Cancer Ther. 2017 16 1054 1067 5F62 28336808 Crystal structure of the first bromodomain of human BRD4 in complex with MA4-022-2 2015-12-04 2017-02-08 Ember, S.W.,Lambert, Q.T.,Berndt, N.,Gunawan, S.,Ayaz, M.,Tauro, M.,Zhu, J.Y.,Cranfill, P.J.,Greninger, P.,Lynch, C.C.,Benes, C.H.,Lawrence, H.R.,Reuther, G.W.,Lawrence, N.J.,Schonbrunn, E. Potent Dual BET Bromodomain-Kinase Inhibitors as Value-Added Multitargeted Chemical Probes and Cancer Therapeutics. Mol. Cancer Ther. 2017 16 1054 1067 5F63 28336808 Crystal structure of the first bromodomain of human BRD4 in complex with SG3-179 2015-12-04 2017-02-08 Ember, S.W.,Lambert, Q.T.,Berndt, N.,Gunawan, S.,Ayaz, M.,Tauro, M.,Zhu, J.Y.,Cranfill, P.J.,Greninger, P.,Lynch, C.C.,Benes, C.H.,Lawrence, H.R.,Reuther, G.W.,Lawrence, N.J.,Schonbrunn, E. Potent Dual BET Bromodomain-Kinase Inhibitors as Value-Added Multitargeted Chemical Probes and Cancer Therapeutics. Mol. Cancer Ther. 2017 16 1054 1067 5UCQ The structure of archaeal Inorganic Pyrophosphatase in complex with pyrophosphate 2016-12-22 2017-02-08 Inoguchi, N.,Hughes, R.C.,Meehan, E.J.,Ng, J.D. The structure of archaeal Inorganic Pyrophosphatase in complex with pyrophosphate To Be Published 0 0 0 0 5K0X 28032464 Crystal structure of the catalytic domain of the proto-oncogene tyrosine-protein kinase MER in complex with inhibitor UNC2541 2016-05-17 2017-02-22 McIver, A.L.,Zhang, W.,Liu, Q.,Jiang, X.,Stashko, M.A.,Nichols, J.,Miley, M.J.,Norris-Drouin, J.,Machius, M.,DeRyckere, D.,Wood, E.,Graham, D.K.,Earp, H.S.,Kireev, D.,Frye, S.V.,Wang, X. Discovery of Macrocyclic Pyrimidines as MerTK-Specific Inhibitors. ChemMedChem 2017 12 207 213 5IIE 28249163 STRUCTURE OF THE UNLIGANDED ANTI-HIV ANTIBODY DH501 THAT BINDS GP120 V3 GLYCAN AND THE BASE OF V3 2016-03-01 2017-03-01 Saunders, K.O.,Nicely, N.I.,Wiehe, K.,Bonsignori, M.,Meyerhoff, R.R.,Parks, R.,Walkowicz, W.E.,Aussedat, B.,Wu, N.R.,Cai, F.,Vohra, Y.,Park, P.K.,Eaton, A.,Go, E.P.,Sutherland, L.L.,Scearce, R.M.,Barouch, D.H.,Zhang, R.,Von Holle, T.,Overman, R.G.,Anasti, K.,Sanders, R.W.,Moody, M.A.,Kepler, T.B.,Korber, B.,Desaire, H.,Santra, S.,Letvin, N.L.,Nabel, G.J.,Montefiori, D.C.,Tomaras, G.D.,Liao, H.X.,Alam, S.M.,Danishefsky, S.J.,Haynes, B.F. Vaccine Elicitation of High Mannose-Dependent Neutralizing Antibodies against the V3-Glycan Broadly Neutralizing Epitope in Nonhuman Primates. Cell Rep 2017 18 2175 2188 5T4Z 28249163 STRUCTURE OF THE ANTI-HIV ANTIBODY DH501 THAT BINDS GP120 V3 GLYCAN AND THE BASE OF V3 WITH FREE MAN9 GLYCAN 2016-08-30 2017-03-08 Saunders, K.O.,Nicely, N.I.,Wiehe, K.,Bonsignori, M.,Meyerhoff, R.R.,Parks, R.,Walkowicz, W.E.,Aussedat, B.,Wu, N.R.,Cai, F.,Vohra, Y.,Park, P.K.,Eaton, A.,Go, E.P.,Sutherland, L.L.,Scearce, R.M.,Barouch, D.H.,Zhang, R.,Von Holle, T.,Overman, R.G.,Anasti, K.,Sanders, R.W.,Moody, M.A.,Kepler, T.B.,Korber, B.,Desaire, H.,Santra, S.,Letvin, N.L.,Nabel, G.J.,Montefiori, D.C.,Tomaras, G.D.,Liao, H.X.,Alam, S.M.,Danishefsky, S.J.,Haynes, B.F. Vaccine Elicitation of High Mannose-Dependent Neutralizing Antibodies against the V3-Glycan Broadly Neutralizing Epitope in Nonhuman Primates. Cell Rep 2017 18 2175 2188 5BJT 28330995 Crystal structure of human FcRn with a peptide inhibitor at multiple sites 2016-10-23 2017-03-22 Pyzik, M.,Rath, T.,Kuo, T.T.,Win, S.,Baker, K.,Hubbard, J.J.,Grenha, R.,Gandhi, A.,Kramer, T.D.,Mezo, A.R.,Taylor, Z.S.,McDonnell, K.,Nienaber, V.,Andersen, J.T.,Mizoguchi, A.,Blumberg, L.,Purohit, S.,Jones, S.D.,Christianson, G.,Lencer, W.I.,Sandlie, I.,Kaplowitz, N.,Roopenian, D.C.,Blumberg, R.S. Hepatic FcRn regulates albumin homeostasis and susceptibility to liver injury. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5L0P 28419162 Symmetry-based assembly of a two-dimensional protein lattice 2016-07-27 2017-03-29 Poulos, S.,Agah, S.,Jallah, N.,Faham, S. Symmetry based assembly of a 2 dimensional protein lattice. PLoS ONE 2017 12 0 0 5F5Z 28336808 Crystal structure of the first bromodomain of human BRD4 in complex with MA2-014 2015-12-04 2017-04-05 Ember, S.W.,Lambert, Q.T.,Berndt, N.,Gunawan, S.,Ayaz, M.,Tauro, M.,Zhu, J.Y.,Cranfill, P.J.,Greninger, P.,Lynch, C.C.,Benes, C.H.,Lawrence, H.R.,Reuther, G.W.,Lawrence, N.J.,Schonbrunn, E. Potent Dual BET Bromodomain-Kinase Inhibitors as Value-Added Multitargeted Chemical Probes and Cancer Therapeutics. Mol. Cancer Ther. 2017 16 1054 1067 5SUI Ribosome assembly factor NSA1: C-terminal truncation 2016-08-03 2017-04-26 Lo, Y.H.,Stanley, R.E. Ribosome assembly factor To Be Published 0 0 0 0 5TLA 28438633 Crystal structure of mouse ISG15 2016-10-10 2017-05-03 Daczkowski, C.M.,Dzimianski, J.V.,Clasman, J.R.,Goodwin, O.Y.,Mesecar, A.D.,Pegan, S.D. Structural Insights into the Interaction of Coronavirus Papain-Like Proteases and Interferon-Stimulated Gene Product 15 from Different Species. J. Mol. Biol. 2017 429 1661 1683 5KK7 27856750 Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase T688A mutant and Thio-disaccharide substrate analog complex 2016-06-21 2017-05-10 Xiang, Y.,Karaveg, K.,Moremen, K.W. Substrate recognition and catalysis by GH47 alpha-mannosidases involved in Asn-linked glycan maturation in the mammalian secretory pathway. Proc. Natl. Acad. Sci. U.S.A. 2016 113 0 0 5UOV 28434781 HIV-1 wild Type protease with GRL-1118A , an isophthalamide-derived P2-P3 ligand with the sulfonamide isostere as the P2' group 2017-02-01 2017-05-10 Ghosh, A.K.,Brindisi, M.,Nyalapatla, P.R.,Takayama, J.,Ella-Menye, J.R.,Yashchuk, S.,Agniswamy, J.,Wang, Y.F.,Aoki, M.,Amano, M.,Weber, I.T.,Mitsuya, H. Design of novel HIV-1 protease inhibitors incorporating isophthalamide-derived P2-P3 ligands: Synthesis, biological evaluation and X-ray structural studies of inhibitor-HIV-1 protease complex. Bioorg. Med. Chem. 2017 25 5114 5127 5UPZ 28434781 HIV-1 wild Type protease with GRL-0518A , an isophthalamide-derived P2-P3 ligand with the para-hydoxymethyl sulfonamide isostere as the P2' group 2017-02-05 2017-05-10 Ghosh, A.K.,Brindisi, M.,Nyalapatla, P.R.,Takayama, J.,Ella-Menye, J.R.,Yashchuk, S.,Agniswamy, J.,Wang, Y.F.,Aoki, M.,Amano, M.,Weber, I.T.,Mitsuya, H. Design of novel HIV-1 protease inhibitors incorporating isophthalamide-derived P2-P3 ligands: Synthesis, biological evaluation and X-ray structural studies of inhibitor-HIV-1 protease complex. Bioorg. Med. Chem. 2017 25 5114 5127 5TKF 28177316 Neurospora crassa polysaccharide monooxygenase 2 high mannosylation 2016-10-06 2017-05-17 O'Dell, W.B.,Swartz, P.D.,Weiss, K.L.,Meilleur, F. Crystallization of a fungal lytic polysaccharide monooxygenase expressed from glycoengineered Pichia pastoris for X-ray and neutron diffraction. Acta Crystallogr F Struct Biol 2017 73 70 78 5T00 28529057 Human CTCF ZnF3-7 and methylated DNA complex 2016-08-15 2017-05-24 Hashimoto, H.,Wang, D.,Horton, J.R.,Zhang, X.,Corces, V.G.,Cheng, X. Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA. Mol. Cell 2017 66 711 0 5VIK 28936332 Crystal structure of monomeric near-infrared fluorescent protein miRFP703 2017-04-17 2017-06-07 Baloban, M.,Shcherbakova, D.M.,Pletnev, S.,Pletnev, V.Z.,Lagarias, J.C.,Verkhusha, V.V. Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies. Chem Sci 2017 8 4546 4557 5VIQ 28936332 Crystal structure of monomeric near-infrared fluorescent protein miRFP709 2017-04-17 2017-06-07 Baloban, M.,Shcherbakova, D.M.,Pletnev, S.,Pletnev, V.Z.,Lagarias, J.C.,Verkhusha, V.V. Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies. Chem Sci 2017 8 4546 4557 5U7E 28742822 Apo dihydroneopterin triphosphate pyrophosphohydrolase from E. coli 2016-12-12 2017-06-21 Hill, S.E.,Nguyen, E.,Ukachukwu, C.U.,Freeman, D.M.,Quirk, S.,Lieberman, R.L. Metal ion coordination in the E. coli Nudix hydrolase dihydroneopterin triphosphate pyrophosphatase: New clues into catalytic mechanism. PLoS ONE 2017 12 0 0 5VZ2 31588734 Structure of ClpP from Staphylococcus aureus in complex with Acyldepsipeptide 2017-05-26 2017-06-21 Griffith, E.C.,Zhao, Y.,Singh, A.P.,Conlon, B.P.,Tangallapally, R.,Shadrick, W.R.,Liu, J.,Wallace, M.J.,Yang, L.,Elmore, J.M.,Li, Y.,Zheng, Z.,Miller, D.J.,Cheramie, M.N.,Lee, R.B.,LaFleur, M.D.,Lewis, K.,Lee, R.E. Ureadepsipeptides as ClpP Activators. Acs Infect Dis. 2019 0 0 0 5JJD 28652409 crystal structure of the ceramide transfer protein PH and START domain complex 2016-04-23 2017-07-05 Prashek, J.,Bouyain, S.,Fu, M.,Li, Y.,Berkes, D.,Yao, X. Interaction between the PH and START domains of ceramide transfer protein competes with phosphatidylinositol 4-phosphate binding by the PH domain. J. Biol. Chem. 2017 292 14217 14228 5TOV 28629859 Crystal structure of the inactive form of S-adenosyl-L-homocysteine hydrolase from Thermotoga maritima in binary complex with NADH 2016-10-19 2017-07-05 Brzezinski, K.,Czyrko, J.,Sliwiak, J.,Nalewajko-Sieliwoniuk, E.,Jaskolski, M.,Nocek, B.,Dauter, Z. S-adenosyl-L-homocysteine hydrolase from a hyperthermophile (Thermotoga maritima) is expressed in Escherichia coli in inactive form - Biochemical and structural studies. Int. J. Biol. Macromol. 2017 104 584 596 5TOW 28629859 Crystal structure of the inactive form of S-adenosyl-L-homocysteine hydrolase from Thermotoga maritima in ternary complex with NADH and Adenosine 2016-10-19 2017-07-05 Brzezinski, K.,Czyrko, J.,Sliwiak, J.,Nalewajko-Sieliwoniuk, E.,Jaskolski, M.,Nocek, B.,Dauter, Z. S-adenosyl-L-homocysteine hydrolase from a hyperthermophile (Thermotoga maritima) is expressed in Escherichia coli in inactive form - Biochemical and structural studies. Int. J. Biol. Macromol. 2017 104 584 596 5W46 29422536 Structure of S65D Phosphomimetic Ubiquitin Refined at 1.2 Angstroms Resolution 2017-06-09 2017-07-05 Kazansky, Y.,Lai, M.Y.,Singh, R.K.,Fushman, D. Impact of different ionization states of phosphorylated Serine-65 on ubiquitin structure and interactions. Sci Rep 2018 8 2651 2651 5KQO 30278288 1-deoxy-D-xylulose 5-phosphate reductoisomerase from Vibrio vulnificus 2016-07-06 2017-07-12 Ussin, N.K.,Bagnell, A.M.,Offermann, L.R.,Abdulsalam, R.,Perdue, M.L.,Magee, P.,Chruszcz, M. Structural characterization of 1-deoxy-D-xylulose 5-phosphate Reductoisomerase from Vibrio vulnificus. Biochim Biophys Acta Proteins 2018 1866 1209 1215 5KRY 30278288 1-deoxy-D-xylulose 5-phosphate reductoisomerase from Vibrio vulnificus 2016-07-07 2017-07-12 Ussin, N.K.,Bagnell, A.M.,Offermann, L.R.,Abdulsalam, R.,Perdue, M.L.,Magee, P.,Chruszcz, M. Structural characterization of 1-deoxy-D-xylulose 5-phosphate Reductoisomerase from Vibrio vulnificus. Biochim Biophys Acta Proteins 2018 1866 1209 1215 5KCX 28947155 Pim-1 kinase in Complex with a Selective N-substituted 7-azaindole Inhibitor 2016-06-07 2017-07-19 Barberis, C.,Moorcroft, N.,Arendt, C.,Levit, M.,Moreno-Mazza, S.,Batchelor, J.,Mechin, I.,Majid, T. Discovery of N-substituted 7-azaindoles as PIM1 kinase inhibitors - Part I. Bioorg. Med. Chem. Lett. 2017 27 4730 4734 5UZU 28808028 Immune evasion by a Staphylococcal Peroxidase Inhibitor that blocks myeloperoxidase 2017-02-27 2017-07-26 de Jong, N.W.M.,Ramyar, K.X.,Guerra, F.E.,Nijland, R.,Fevre, C.,Voyich, J.M.,McCarthy, A.J.,Garcia, B.L.,van Kessel, K.P.M.,van Strijp, J.A.G.,Geisbrecht, B.V.,Haas, P.A. Immune evasion by a staphylococcal inhibitor of myeloperoxidase. Proc. Natl. Acad. Sci. U.S.A. 2017 114 9439 9444 5KMT 28989673 CTX-M9 mutant L48A 2016-06-27 2017-08-02 Latallo, M.J.,Cortina, G.A.,Faham, S.,Nakamoto, R.K.,Kasson, P.M. Predicting allosteric mutants that increase activity of a major antibiotic resistance enzyme. Chem Sci 2017 8 6484 6492 5W18 31588734 Staphylococcus aureus ClpP in complex with (S)-N-((2R,6S,8aS,14aS,20S,23aS)-2,6-dimethyl-5,8,14,19,23-pentaoxooctadecahydro-1H,5H,14H,19H-pyrido[2,1-i]dipyrrolo[2,1-c:2',1'-l][1]oxa[4,7,10,13]tetraazacyclohexadecin-20-yl)-3-phenyl-2-(3-phenylureido)propanamide 2017-06-02 2017-08-09 Griffith, E.C.,Zhao, Y.,Singh, A.P.,Conlon, B.P.,Tangallapally, R.,Shadrick, W.R.,Liu, J.,Wallace, M.J.,Yang, L.,Elmore, J.M.,Li, Y.,Zheng, Z.,Miller, D.J.,Cheramie, M.N.,Lee, R.B.,LaFleur, M.D.,Lewis, K.,Lee, R.E. Ureadepsipeptides as ClpP Activators. Acs Infect Dis. 2019 0 0 0 5W7I 28757145 X-ray structure of ankyrin repeat domain of DHHC17 in complex with Snap25b peptide 2017-06-20 2017-08-09 Verardi, R.,Kim, J.S.,Ghirlando, R.,Banerjee, A. Structural Basis for Substrate Recognition by the Ankyrin Repeat Domain of Human DHHC17 Palmitoyltransferase. Structure 2017 25 1337 0 5VJ0 29308295 Crystal Structure of heme-containing DyP Type Peroxidase from Enterobacter lignolyticus 2017-04-17 2017-08-16 Shrestha, R.,Huang, G.,Meekins, D.A.,Geisbrecht, B.V.,Li, P. Mechanistic Insights into Dye-Decolorizing Peroxidase Revealed by Solvent Isotope and Viscosity Effects. ACS Catal 2017 7 6352 6364 5VC5 28792760 Crystal structure of human WEE1 kinase domain in complex with PD-166285 2017-03-31 2017-08-23 Zhu, J.Y.,Cuellar, R.A.,Berndt, N.,Lee, H.E.,Olesen, S.H.,Martin, M.P.,Jensen, J.T.,Georg, G.I.,Schonbrunn, E. Structural Basis of Wee Kinases Functionality and Inactivation by Diverse Small Molecule Inhibitors. J. Med. Chem. 2017 60 7863 7875 5VCX 28792760 CRYSTAL STRUCTURE OF HUMAN MYT1 KINASE DOMAIN (UNTREATED) IN COMPLEX WITH SARACATINIB 2017-04-01 2017-08-23 Zhu, J.Y.,Cuellar, R.A.,Berndt, N.,Lee, H.E.,Olesen, S.H.,Martin, M.P.,Jensen, J.T.,Georg, G.I.,Schonbrunn, E. Structural Basis of Wee Kinases Functionality and Inactivation by Diverse Small Molecule Inhibitors. J. Med. Chem. 2017 60 7863 7875 5TXX 28811466 DNA Polymerase Mu Pre-Catalytic Ground State Ternary Complex, Ca2+ 2016-11-17 2017-08-30 Jamsen, J.A.,Beard, W.A.,Pedersen, L.C.,Shock, D.D.,Moon, A.F.,Krahn, J.M.,Bebenek, K.,Kunkel, T.A.,Wilson, S.H. Time-lapse crystallography snapshots of a double-strand break repair polymerase in action. Nat Commun 2017 8 253 253 5TXZ 28811466 DNA Polymerase Mu Reactant Complex, 100mM Mg2+ (15 min) 2016-11-17 2017-08-30 Jamsen, J.A.,Beard, W.A.,Pedersen, L.C.,Shock, D.D.,Moon, A.F.,Krahn, J.M.,Bebenek, K.,Kunkel, T.A.,Wilson, S.H. Time-lapse crystallography snapshots of a double-strand break repair polymerase in action. Nat Commun 2017 8 253 253 5TYB 28811466 DNA Polymerase Mu Reactant Complex, 10mM Mg2+ (7.5 min) 2016-11-19 2017-08-30 Jamsen, J.A.,Beard, W.A.,Pedersen, L.C.,Shock, D.D.,Moon, A.F.,Krahn, J.M.,Bebenek, K.,Kunkel, T.A.,Wilson, S.H. Time-lapse crystallography snapshots of a double-strand break repair polymerase in action. Nat Commun 2017 8 253 253 5TYD 28811466 DNA Polymerase Mu Reactant Complex, 10 mM Mg2+ (45 min) 2016-11-19 2017-08-30 Jamsen, J.A.,Beard, W.A.,Pedersen, L.C.,Shock, D.D.,Moon, A.F.,Krahn, J.M.,Bebenek, K.,Kunkel, T.A.,Wilson, S.H. Time-lapse crystallography snapshots of a double-strand break repair polymerase in action. Nat Commun 2017 8 253 253 5TYG 28811466 DNA Polymerase Mu Product Complex, 10 mM Mg2+ (960 min) 2016-11-19 2017-08-30 Jamsen, J.A.,Beard, W.A.,Pedersen, L.C.,Shock, D.D.,Moon, A.F.,Krahn, J.M.,Bebenek, K.,Kunkel, T.A.,Wilson, S.H. Time-lapse crystallography snapshots of a double-strand break repair polymerase in action. Nat Commun 2017 8 253 253 5TYU 28811466 DNA Polymerase Mu Reactant Complex, Mn2+ (4 min) 2016-11-21 2017-08-30 Jamsen, J.A.,Beard, W.A.,Pedersen, L.C.,Shock, D.D.,Moon, A.F.,Krahn, J.M.,Bebenek, K.,Kunkel, T.A.,Wilson, S.H. Time-lapse crystallography snapshots of a double-strand break repair polymerase in action. Nat Commun 2017 8 253 253 5TYY 28811466 DNA Polymerase Mu Product Complex, Mn2+ (60 min) 2016-11-21 2017-08-30 Jamsen, J.A.,Beard, W.A.,Pedersen, L.C.,Shock, D.D.,Moon, A.F.,Krahn, J.M.,Bebenek, K.,Kunkel, T.A.,Wilson, S.H. Time-lapse crystallography snapshots of a double-strand break repair polymerase in action. Nat Commun 2017 8 253 253 5VI7 28876240 Crystal structure of the Zika virus NS3 helicase 2017-04-14 2017-09-06 Bukrejewska, M.,Derewenda, U.,Radwanska, M.,Engel, D.A.,Derewenda, Z.S. Crystal structures of the methyltransferase and helicase from the ZIKA 1947 MR766 Uganda strain. Acta Crystallogr D Struct Biol 2017 73 767 774 5W93 28860193 p130Cas complex with paxillin LD1 2017-06-22 2017-09-06 Zhang, C.,Miller, D.J.,Guibao, C.D.,Donato, D.M.,Hanks, S.K.,Zheng, J.J. Structural and functional insights into the interaction between the Cas family scaffolding protein p130Cas and the focal adhesion-associated protein paxillin. J. Biol. Chem. 2017 292 18281 18289 5W2H 28882892 Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with Ins(1,4,5)P3 and ADP 2017-06-06 2017-09-13 Wang, H.,Shears, S.B. Structural features of human inositol phosphate multikinase rationalize its inositol phosphate kinase and phosphoinositide 3-kinase activities. J. Biol. Chem. 2017 292 18192 18202 5WLO 28958624 a novel 13-ring macrocyclic HIV-1 protease inhibitors involving the P1'-P2' ligands 2017-07-27 2017-10-11 Ghosh, A.K.,Sean Fyvie, W.,Brindisi, M.,Steffey, M.,Agniswamy, J.,Wang, Y.F.,Aoki, M.,Amano, M.,Weber, I.T.,Mitsuya, H. Design, synthesis, X-ray studies, and biological evaluation of novel macrocyclic HIV-1 protease inhibitors involving the P1'-P2' ligands. Bioorg. Med. Chem. Lett. 2017 27 4925 4931 6AOL 28857290 Structure of molecular chaperone Grp94 bound to selective inhibitor methyl 3-chloro-2-(2-{2-[(4-fluorophenyl)methyl]phenyl}ethyl)-4,6-dihydroxybenzoate 2017-08-16 2017-10-11 Crowley, V.M.,Huard, D.J.E.,Lieberman, R.L.,Blagg, B.S.J. Second Generation Grp94-Selective Inhibitors Provide Opportunities for the Inhibition of Metastatic Cancer. Chemistry 2017 23 15775 15782 6AOM 28857290 Structure of molecular chaperone Grp94 bound to selective inhibitor methyl 2-[2-(2-benzylphenyl)ethyl]-3-chloro-4,6-dihydroxybenzoate 2017-08-16 2017-10-11 Crowley, V.M.,Huard, D.J.E.,Lieberman, R.L.,Blagg, B.S.J. Second Generation Grp94-Selective Inhibitors Provide Opportunities for the Inhibition of Metastatic Cancer. Chemistry 2017 23 15775 15782 5WPW 28712292 Crystal structure of coconut allergen cocosin 2016-11-21 2017-10-25 Jin, T.,Wang, C.,Zhang, C.,Wang, Y.,Chen, Y.W.,Guo, F.,Howard, A.,Cao, M.J.,Fu, T.J.,McHugh, T.H.,Zhang, Y. Crystal Structure of Cocosin, A Potential Food Allergen from Coconut (Cocos nucifera) J. Agric. Food Chem. 2017 65 7560 7568 5L12 Crystal structure of 2C-methyl-D-erythritol 2,4-clycodiphosphate synthase from BURKHOLDERIA PSEUDOMALLEI double mutant 2016-07-28 2017-11-01 Blain, J.M.,Raneiri, G.,Walter, R.L.,Hagen, T.J.,Horn, J.R. Enzyme Engineering for the Development of a High-Throughput Temperature Screen of Burkholderia pseudomallei IspF Inhibitors To Be Published 0 0 0 0 5L03 Crystal structure of 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE Synthase from BURKHOLDERIA PSEUDOMALLEI bound to L-tryptophan hydroxamate 2016-07-26 2017-11-08 Blain, J.M.,Ghose, D.,Gorman, J.L.,Goshu, G.M.,Ranieri, G.,Zhao, L.,Bode, B.,Meganathan, R.,Walter, R.L.,Hagen, T.J.,Horn, J.R. Synthesis and Characterization of the Burkholderia pseudomallei IspF Inhibitor L-tryptophan hydroxamate To Be Published 0 0 0 0 5TUT UbcH5a-Ub isopeptide conjugate 2016-11-07 2017-11-08 Sanchez, J.G.,Wagner, J.M.,Pornillos, O. UbcH5a-Ub isopeptide conjugate To be Published 0 0 0 0 5U4R 28783708 Crystal structure of the broadly neutralizing Influenza A antibody VRC 315 53-1A09 Fab. 2016-12-05 2017-11-15 Andrews, S.F.,Joyce, M.G.,Chambers, M.J.,Gillespie, R.A.,Kanekiyo, M.,Leung, K.,Yang, E.S.,Tsybovsky, Y.,Wheatley, A.K.,Crank, M.C.,Boyington, J.C.,Prabhakaran, M.S.,Narpala, S.R.,Chen, X.,Bailer, R.T.,Chen, G.,Coates, E.,Kwong, P.D.,Koup, R.A.,Mascola, J.R.,Graham, B.S.,Ledgerwood, J.E.,McDermott, A.B. Preferential induction of cross-group influenza A hemagglutinin stem-specific memory B cells after H7N9 immunization in humans. Sci Immunol 2017 2 0 0 6AUD 28947940 PI3K-gamma K802T in complex with Cpd 8 10-((1-(tert-butyl)piperidin-4-yl)sulfinyl)-2-(1-isopropyl-1H-1,2,4-triazol-5-yl)-5,6-dihydrobenzo[f]imidazo[1,2-d][1,4]oxazepine 2017-08-31 2017-11-15 Safina, B.S.,Elliott, R.L.,Forrest, A.K.,Heald, R.A.,Murray, J.M.,Nonomiya, J.,Pang, J.,Salphati, L.,Seward, E.M.,Staben, S.T.,Ultsch, M.,Wei, B.,Yang, W.,Sutherlin, D.P. Design of Selective Benzoxazepin PI3K delta Inhibitors Through Control of Dihedral Angles. ACS Med Chem Lett 2017 8 936 940 5VJ4 29127407 Crystal structure of a putative surface protein encoded by BTA121 2017-04-18 2017-11-29 Luo, Z.,Kelleher, A.J.,Darwiche, R.,Hudspeth, E.M.,Shittu, O.K.,Krishnavajhala, A.,Schneiter, R.,Lopez, J.E.,Asojo, O.A. Crystal Structure of Borrelia turicatae protein, BTA121, a differentially regulated gene in the tick-mammalian transmission cycle of relapsing fever spirochetes. Sci Rep 2017 7 15310 15310 5UKP 29170366 Structure of unliganded anti-gp120 CD4bs antibody DH522.1 Fab 2017-01-23 2017-12-06 Williams, W.B.,Zhang, J.,Jiang, C.,Nicely, N.I.,Fera, D.,Luo, K.,Moody, M.A.,Liao, H.X.,Alam, S.M.,Kepler, T.B.,Ramesh, A.,Wiehe, K.,Holland, J.A.,Bradley, T.,Vandergrift, N.,Saunders, K.O.,Parks, R.,Foulger, A.,Xia, S.M.,Bonsignori, M.,Montefiori, D.C.,Louder, M.,Eaton, A.,Santra, S.,Scearce, R.,Sutherland, L.,Newman, A.,Bouton-Verville, H.,Bowman, C.,Bomze, H.,Gao, F.,Marshall, D.J.,Whitesides, J.F.,Nie, X.,Kelsoe, G.,Reed, S.G.,Fox, C.B.,Clary, K.,Koutsoukos, M.,Franco, D.,Mascola, J.R.,Harrison, S.C.,Haynes, B.F.,Verkoczy, L. Initiation of HIV neutralizing B cell lineages with sequential envelope immunizations. Nat Commun 2017 8 1732 1732 5WOP 29497014 High Resolution Structure of Mutant CA09-PB2cap 2017-08-02 2017-12-20 Constantinides, A.,Gumpper, R.,Severin, C.,Luo, M. High-resolution structure of the Influenza A virus PB2cap binding domain illuminates the changes induced by ligand binding. Acta Crystallogr F Struct Biol 2018 74 122 127 5W9G 29215062 Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 9k (SRI-30023) 2017-06-23 2017-12-27 Beylkin, D.,Kumar, G.,Zhou, W.,Park, J.,Jeevan, T.,Lagisetti, C.,Harfoot, R.,Webby, R.J.,White, S.W.,Webb, T.R. Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease. Sci Rep 2017 7 17139 17139 6AZP 29306874 A Structurally Dynamic N-terminal Region Drives Function of the Staphylococcal Peroxidase Inhibitor (SPIN) 2017-09-11 2017-12-27 de Jong, N.W.M.,Ploscariu, N.T.,Ramyar, K.X.,Garcia, B.L.,Herrera, A.I.,Prakash, O.,Katz, B.B.,Leidal, K.G.,Nauseef, W.M.,van Kessel, K.P.M.,van Strijp, J.A.G.,Geisbrecht, B.V. A structurally dynamic N-terminal region drives function of the staphylococcal peroxidase inhibitor (SPIN). J. Biol. Chem. 2018 293 2260 2271 6AZR 29235472 Crystal structure of the T264A HK853cp-BeF3-RR468 complex 2017-09-11 2017-12-27 Liu, Y.,Rose, J.,Huang, S.,Hu, Y.,Wu, Q.,Wang, D.,Li, C.,Liu, M.,Zhou, P.,Jiang, L. A pH-gated conformational switch regulates the phosphatase activity of bifunctional HisKA-family histidine kinases. Nat Commun 2017 8 2104 2104 5WA7 29215062 Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 9b (SRI-30101) 2017-06-25 2018-01-03 Beylkin, D.,Kumar, G.,Zhou, W.,Park, J.,Jeevan, T.,Lagisetti, C.,Harfoot, R.,Webby, R.J.,White, S.W.,Webb, T.R. Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease. Sci Rep 2017 7 17139 17139 5WAP 29215062 Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 10i (SRI-30025) 2017-06-26 2018-01-03 Beylkin, D.,Kumar, G.,Zhou, W.,Park, J.,Jeevan, T.,Lagisetti, C.,Harfoot, R.,Webby, R.J.,White, S.W.,Webb, T.R. Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease. Sci Rep 2017 7 17139 17139 5WB3 29215062 Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 10j (SRI-30026) 2017-06-27 2018-01-03 Beylkin, D.,Kumar, G.,Zhou, W.,Park, J.,Jeevan, T.,Lagisetti, C.,Harfoot, R.,Webby, R.J.,White, S.W.,Webb, T.R. Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease. Sci Rep 2017 7 17139 17139 5WDC 29215062 Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 9e (SRI-29843) 2017-07-04 2018-01-03 Beylkin, D.,Kumar, G.,Zhou, W.,Park, J.,Jeevan, T.,Lagisetti, C.,Harfoot, R.,Webby, R.J.,White, S.W.,Webb, T.R. Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease. Sci Rep 2017 7 17139 17139 5WDN 29215062 Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 6d (SRI-29680) 2017-07-05 2018-01-03 Beylkin, D.,Kumar, G.,Zhou, W.,Park, J.,Jeevan, T.,Lagisetti, C.,Harfoot, R.,Webby, R.J.,White, S.W.,Webb, T.R. Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease. Sci Rep 2017 7 17139 17139 5WEB 29215062 Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 10e (SRI-30024) 2017-07-08 2018-01-03 Beylkin, D.,Kumar, G.,Zhou, W.,Park, J.,Jeevan, T.,Lagisetti, C.,Harfoot, R.,Webby, R.J.,White, S.W.,Webb, T.R. Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease. Sci Rep 2017 7 17139 17139 5WFM 29215062 Crystal structure of the influenza virus PA endonuclease (E119D mutant) in complex with inhibitor 10e (SRI-30024) 2017-07-12 2018-01-03 Beylkin, D.,Kumar, G.,Zhou, W.,Park, J.,Jeevan, T.,Lagisetti, C.,Harfoot, R.,Webby, R.J.,White, S.W.,Webb, T.R. Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease. Sci Rep 2017 7 17139 17139 6B0O 29294058 Zinc finger Domain of WT1(-KTS form) with 12+1mer Oligonucleotide with 3' Triplet TGT 2017-09-14 2018-01-03 Wang, D.,Horton, J.R.,Zheng, Y.,Blumenthal, R.M.,Zhang, X.,Cheng, X. Role for first zinc finger of WT1 in DNA sequence specificity: Denys-Drash syndrome-associated WT1 mutant in ZF1 enhances affinity for a subset of WT1 binding sites. Nucleic Acids Res. 2018 46 3864 3877 6B0P 29294058 Zinc finger Domain of WT1(-KTS form) with 12+1mer Oligonucleotide with 3' Triplet GGT 2017-09-14 2018-01-03 Wang, D.,Horton, J.R.,Zheng, Y.,Blumenthal, R.M.,Zhang, X.,Cheng, X. Role for first zinc finger of WT1 in DNA sequence specificity: Denys-Drash syndrome-associated WT1 mutant in ZF1 enhances affinity for a subset of WT1 binding sites. Nucleic Acids Res. 2018 46 3864 3877 6BSG 29295939 Structure of HIV-1 RT complexed with RNA/DNA hybrid in an RNA hydrolysis-off mode 2017-12-03 2018-01-03 Tian, L.,Kim, M.S.,Li, H.,Wang, J.,Yang, W. Structure of HIV-1 reverse transcriptase cleaving RNA in an RNA/DNA hybrid. Proc. Natl. Acad. Sci. U.S.A. 2018 115 507 512 6BSH 29295939 Structure of HIV-1 RT complexed with RNA/DNA hybrid in the RNA hydrolysis mode 2017-12-03 2018-01-03 Tian, L.,Kim, M.S.,Li, H.,Wang, J.,Yang, W. Structure of HIV-1 reverse transcriptase cleaving RNA in an RNA/DNA hybrid. Proc. Natl. Acad. Sci. U.S.A. 2018 115 507 512 6BSI 29295939 Structure of HIV-1 RT complexed with an RNA/DNA hybrid containing the polypurine-tract sequence 2017-12-03 2018-01-03 Tian, L.,Kim, M.S.,Li, H.,Wang, J.,Yang, W. Structure of HIV-1 reverse transcriptase cleaving RNA in an RNA/DNA hybrid. Proc. Natl. Acad. Sci. U.S.A. 2018 115 507 512 6BSJ 29295939 Structure of HIV-1 RT complexed with an RNA/DNA hybrid sequence non-preferred for RNA hydrolysis 2017-12-03 2018-01-03 Tian, L.,Kim, M.S.,Li, H.,Wang, J.,Yang, W. Structure of HIV-1 reverse transcriptase cleaving RNA in an RNA/DNA hybrid. Proc. Natl. Acad. Sci. U.S.A. 2018 115 507 512 5TTZ 29263415 Crystal structure of Grp94 bound to isoform-selective inhibitor methyl 2-(2-(1-(4-bromobenzyl)-1H-imidazol-2-yl)ethyl)-3-chloro-4,6-dihydroxybenzoate 2016-11-04 2018-01-10 Stothert, A.R.,Suntharalingam, A.,Tang, X.,Crowley, V.M.,Mishra, S.J.,Webster, J.M.,Nordhues, B.A.,Huard, D.J.E.,Passaglia, C.L.,Lieberman, R.L.,Blagg, B.S.J.,Blair, L.J.,Koren, J.,Dickey, C.A. Isoform-selective Hsp90 inhibition rescues model of hereditary open-angle glaucoma. Sci Rep 2017 7 17951 17951 5W73 29215062 Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 9f (SRI-29835) 2017-06-19 2018-01-17 Beylkin, D.,Kumar, G.,Zhou, W.,Park, J.,Jeevan, T.,Lagisetti, C.,Harfoot, R.,Webby, R.J.,White, S.W.,Webb, T.R. Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease. Sci Rep 2017 7 17139 17139 5W92 29215062 Crystal structure of the influenza virus PA endonuclease in complex with an inhibitor - SRI-30049 2017-06-22 2018-02-07 Beylkin, D.,Kumar, G.,Zhou, W.,Park, J.,Jeevan, T.,Lagisetti, C.,Harfoot, R.,Webby, R.J.,White, S.W.,Webb, T.R. Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease. Sci Rep 2017 7 17139 17139 5UQO 31141475 Crystal structure of 2-methylcitrate synthase from Aspergillus fumigatus 2017-02-08 2018-02-14 Schlachter, C.R.,Klapper, V.,Radford, T.,Chruszcz, M. Comparative studies of Aspergillus fumigatus 2-methylcitrate synthase and human citrate synthase. Biol.Chem. 2019 400 1567 1581 5UQQ 31141475 Crystal structure of 2-methylcitrate synthase from Aspergillus fumigatus 2017-02-08 2018-02-14 Schlachter, C.R.,Klapper, V.,Radford, T.,Chruszcz, M. Comparative studies of Aspergillus fumigatus 2-methylcitrate synthase and human citrate synthase. Biol.Chem. 2019 400 1567 1581 5UQS 31141475 Crystal structure of Citrate synthase from Sus scrofa 2017-02-08 2018-02-14 Schlachter, C.R.,Klapper, V.,Radford, T.,Chruszcz, M. Comparative studies of Aspergillus fumigatus 2-methylcitrate synthase and human citrate synthase. Biol.Chem. 2019 400 1567 1581 6BDV 29414778 Crystal structure of Caspase 3 S150A 2017-10-24 2018-02-14 Thomas, M.E.,Grinshpon, R.,Swartz, P.,Clark, A.C. Modifications to a common phosphorylation network provide individualized control in caspases. J. Biol. Chem. 2018 293 5447 5461 6AXQ 29155580 CREBBP bromodomain in complex with Cpd6 (methyl 1H-indole-3-carboxylate) 2017-09-07 2018-02-21 Bronner, S.M.,Murray, J.,Romero, F.A.,Lai, K.W.,Tsui, V.,Cyr, P.,Beresini, M.H.,de Leon Boenig, G.,Chen, Z.,Choo, E.F.,Clark, K.R.,Crawford, T.D.,Jayaram, H.,Kaufman, S.,Li, R.,Li, Y.,Liao, J.,Liang, X.,Liu, W.,Ly, J.,Maher, J.,Wai, J.,Wang, F.,Zheng, A.,Zhu, X.,Magnuson, S. A Unique Approach to Design Potent and Selective Cyclic Adenosine Monophosphate Response Element Binding Protein, Binding Protein (CBP) Inhibitors. J. Med. Chem. 2017 60 10151 10171 6BFL 29414778 Caspase-3 Mutant- D9A,D28A,T245D 2017-10-26 2018-02-21 Thomas, M.E.,Grinshpon, R.,Swartz, P.,Clark, A.C. Modifications to a common phosphorylation network provide individualized control in caspases. J. Biol. Chem. 2018 293 5447 5461 6BFO 29414778 Caspase-3 Mutant- T245D 2017-10-26 2018-02-21 Thomas, M.E.,Grinshpon, R.,Swartz, P.,Clark, A.C. Modifications to a common phosphorylation network provide individualized control in caspases. J. Biol. Chem. 2018 293 5447 5461 6BG0 29414778 Caspase-3 Mutant - D9A,D28A,S150D 2017-10-27 2018-02-21 Thomas, M.E.,Grinshpon, R.,Swartz, P.,Clark, A.C. Modifications to a common phosphorylation network provide individualized control in caspases. J. Biol. Chem. 2018 293 5447 5461 6BG1 29414778 Caspase-3 Mutant - D9A,D28A,S150E 2017-10-27 2018-02-21 Thomas, M.E.,Grinshpon, R.,Swartz, P.,Clark, A.C. Modifications to a common phosphorylation network provide individualized control in caspases. J. Biol. Chem. 2018 293 5447 5461 6BG4 29414778 Caspase-3 Mutant- T152D 2017-10-27 2018-02-21 Thomas, M.E.,Grinshpon, R.,Swartz, P.,Clark, A.C. Modifications to a common phosphorylation network provide individualized control in caspases. J. Biol. Chem. 2018 293 5447 5461 6BGK 29414778 Caspase-3 Mutant- D9A,D28A,T152D 2017-10-28 2018-02-21 Thomas, M.E.,Grinshpon, R.,Swartz, P.,Clark, A.C. Modifications to a common phosphorylation network provide individualized control in caspases. J. Biol. Chem. 2018 293 5447 5461 6BGQ 29414778 Caspase-3 Mutant - S150D 2017-10-29 2018-02-21 Thomas, M.E.,Grinshpon, R.,Swartz, P.,Clark, A.C. Modifications to a common phosphorylation network provide individualized control in caspases. J. Biol. Chem. 2018 293 5447 5461 6BGR 29414778 Caspase-3 Mutant - S150E 2017-10-29 2018-02-21 Thomas, M.E.,Grinshpon, R.,Swartz, P.,Clark, A.C. Modifications to a common phosphorylation network provide individualized control in caspases. J. Biol. Chem. 2018 293 5447 5461 6BH9 29414778 Caspase-3 Mutant - T152A 2017-10-30 2018-02-21 Thomas, M.E.,Grinshpon, R.,Swartz, P.,Clark, A.C. Modifications to a common phosphorylation network provide individualized control in caspases. J. Biol. Chem. 2018 293 5447 5461 5UZP 31141475 Crystal structure of citrate synthase mutant A348G from homo sapiens 2017-02-27 2018-03-07 Schlachter, C.R.,Klapper, V.,Radford, T.,Chruszcz, M. Comparative studies of Aspergillus fumigatus 2-methylcitrate synthase and human citrate synthase. Biol.Chem. 2019 400 1567 1581 5UZQ 31141475 Crystal structure of citrate synthase from homo sapiens 2017-02-27 2018-03-07 Schlachter, C.R.,Klapper, V.,Radford, T.,Chruszcz, M. Comparative studies of Aspergillus fumigatus 2-methylcitrate synthase and human citrate synthase. Biol.Chem. 2019 400 1567 1581 5UQR 31141475 Crystal structure of 2-methylcitrate synthase from Aspergillus fumigatus 2017-02-08 2018-03-14 Schlachter, C.R.,Klapper, V.,Radford, T.,Chruszcz, M. Comparative studies of Aspergillus fumigatus 2-methylcitrate synthase and human citrate synthase. Biol.Chem. 2019 400 1567 1581 5V5J 29128676 oxyferrous Dehaloperoxidase B 2017-03-14 2018-03-21 Carey, L.M.,Gavenko, R.,Svistunenko, D.A.,Ghiladi, R.A. How nature tunes isoenzyme activity in the multifunctional catalytic globin dehaloperoxidase from Amphitrite ornata. Biochim Biophys Acta Proteins 2018 1866 230 241 5V5Q 29128676 Dehaloperoxidase B L9I mutant 2017-03-14 2018-03-21 Carey, L.M.,Gavenko, R.,Svistunenko, D.A.,Ghiladi, R.A. How nature tunes isoenzyme activity in the multifunctional catalytic globin dehaloperoxidase from Amphitrite ornata. Biochim Biophys Acta Proteins 2018 1866 230 241 6BGX 29537847 LINKED KDM5A JMJ DOMAIN BOUND TO THE INHIBITOR 2-((2-chlorophenyl)((4,4-difluorocyclohexyl)methoxy)methyl)-1H-pyrrolo[3,2-b]pyridine-7-carboxylic acid(Compound N42) 2017-10-29 2018-03-28 Horton, J.R.,Liu, X.,Wu, L.,Zhang, K.,Shanks, J.,Zhang, X.,Rai, G.,Mott, B.T.,Jansen, D.J.,Kales, S.C.,Henderson, M.J.,Pohida, K.,Fang, Y.,Hu, X.,Jadhav, A.,Maloney, D.J.,Hall, M.D.,Simeonov, A.,Fu, H.,Vertino, P.M.,Yan, Q.,Cheng, X. Insights into the Action of Inhibitor Enantiomers against Histone Lysine Demethylase 5A. J. Med. Chem. 2018 61 3193 3208 6BH5 29537847 LINKED KDM5A JMJ DOMAIN BOUND TO THE INHIBITOR 2-((2-chlorophenyl)(3-(piperidin-1-yl)propoxy)methyl)-1H-pyrrolo[3,2-b]pyridine-7-carboxylic acid (Compound N48) 2017-10-29 2018-03-28 Horton, J.R.,Liu, X.,Wu, L.,Zhang, K.,Shanks, J.,Zhang, X.,Rai, G.,Mott, B.T.,Jansen, D.J.,Kales, S.C.,Henderson, M.J.,Pohida, K.,Fang, Y.,Hu, X.,Jadhav, A.,Maloney, D.J.,Hall, M.D.,Simeonov, A.,Fu, H.,Vertino, P.M.,Yan, Q.,Cheng, X. Insights into the Action of Inhibitor Enantiomers against Histone Lysine Demethylase 5A. J. Med. Chem. 2018 61 3193 3208 5VBP 34710325 CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH RO3280 2017-03-30 2018-04-04 Karim, R.M.,Bikowitz, M.J.,Chan, A.,Zhu, J.Y.,Grassie, D.,Becker, A.,Berndt, N.,Gunawan, S.,Lawrence, N.J.,Schonbrunn, E. Differential BET Bromodomain Inhibition by Dihydropteridinone and Pyrimidodiazepinone Kinase Inhibitors. J.Med.Chem. 2021 0 0 0 6ASP 29402077 Structure of Grp94 with methyl 3-chloro-2-(2-(1-(2-ethoxybenzyl)-1 H-imidazol-2-yl)ethyl)-4,6-dihydroxybenzoate, a Grp94-selective inhibitor and promising therapeutic lead for treating myocilin-associated glaucoma 2017-08-25 2018-04-18 Huard, D.J.E.,Crowley, V.M.,Du, Y.,Cordova, R.A.,Sun, Z.,Tomlin, M.O.,Dickey, C.A.,Koren, J.,Blair, L.,Fu, H.,Blagg, B.S.J.,Lieberman, R.L. Trifunctional High-Throughput Screen Identifies Promising Scaffold To Inhibit Grp94 and Treat Myocilin-Associated Glaucoma. ACS Chem. Biol. 2018 13 933 941 6ASQ 29402077 Structure of Grp94 bound to methyl 2-[2-(2-benzylpyridin-3-yl)ethyl]-3-chloro-4,6-dihydroxybenzoate, a pan-Hsp90 inhibitor 2017-08-25 2018-04-18 Huard, D.J.E.,Crowley, V.M.,Du, Y.,Cordova, R.A.,Sun, Z.,Tomlin, M.O.,Dickey, C.A.,Koren, J.,Blair, L.,Fu, H.,Blagg, B.S.J.,Lieberman, R.L. Trifunctional High-Throughput Screen Identifies Promising Scaffold To Inhibit Grp94 and Treat Myocilin-Associated Glaucoma. ACS Chem. Biol. 2018 13 933 941 6CYZ Mycobacterial homoserine kinase ThrB in complex with AMPPNP 2018-04-07 2018-04-18 Li, J.,Korotkov, K.V. Mycobacterial homoserine kinase ThrB To Be Published 0 0 0 0 5W75 29276038 Crystal Structure of Reconstructed Bacterial Elongation Factor Node 168 2017-06-19 2018-04-25 Okafor, C.D.,Pathak, M.C.,Fagan, C.E.,Bauer, N.C.,Cole, M.F.,Gaucher, E.A.,Ortlund, E.A. Structural and Dynamics Comparison of Thermostability in Ancient, Modern, and Consensus Elongation Factor Tus. Structure 2018 26 118 0 5W76 29276038 Crystal Structure of Reconstructed Bacterial Elongation Factor Node 168 2017-06-19 2018-04-25 Okafor, C.D.,Pathak, M.C.,Fagan, C.E.,Bauer, N.C.,Cole, M.F.,Gaucher, E.A.,Ortlund, E.A. Structural and Dynamics Comparison of Thermostability in Ancient, Modern, and Consensus Elongation Factor Tus. Structure 2018 26 118 0 5W7Q 29276038 Crystal Structure of Reconstructed Bacterial Elongation Factor Node 168 2017-06-20 2018-04-25 Okafor, C.D.,Pathak, M.C.,Fagan, C.E.,Bauer, N.C.,Cole, M.F.,Gaucher, E.A.,Ortlund, E.A. Structural and Dynamics Comparison of Thermostability in Ancient, Modern, and Consensus Elongation Factor Tus. Structure 2018 26 118 0 5WA6 29215062 Crystal structure of the influenza virus PA endonuclease in complex with an inhibitor - SRI-30007 2017-06-25 2018-05-02 Beylkin, D.,Kumar, G.,Zhou, W.,Park, J.,Jeevan, T.,Lagisetti, C.,Harfoot, R.,Webby, R.J.,White, S.W.,Webb, T.R. Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease. Sci Rep 2017 7 17139 17139 5UK7 Escherichia coli Hfq bound to dsDNA 2017-01-20 2018-05-09 Orans, J.,Kovach, A.R.,Hoff, K.E.,Brennan, R.G. Crystal structure of Escherichia coli Hfq DNA complex reveals multifunctional nucleic acid binding site To Be Published 0 0 0 0 6C4K 30457329 Full length hUGDH with A104L substitution in the absence of ligand 2018-01-12 2018-05-16 Beattie, N.R.,Pioso, B.J.,Sidlo, A.M.,Keul, N.D.,Wood, Z.A. Hysteresis and Allostery in Human UDP-Glucose Dehydrogenase Require a Flexible Protein Core. Biochemistry 2018 57 6848 6859 5VTS Dehaloperoxidase B Y28F mutant 2017-05-18 2018-05-23 Carey, L.M. Probing the Structure-Function Relationship of a Multifunctional Enzyme using Crystallographic Diffraction Methods Thesis, North Carolina State U 2017 0 0 0 5VTT Dehaloperoxidase B Y38F mutant 2017-05-18 2018-05-23 Carey, L.M. Probing the Structure-Function Relationship of a Multifunctional Enzyme using Crystallographic Diffraction Methods Thesis, North Carolina State U 2017 0 0 0 5VXA 32462112 Structure of the human Mesh1-NADPH complex 2017-05-23 2018-05-23 Ding, C.C.,Rose, J.,Sun, T.,Wu, J.,Chen, P.H.,Lin, C.C.,Yang, W.H.,Chen, K.Y.,Lee, H.,Xu, E.,Tian, S.,Akinwuntan, J.,Zhao, J.,Guan, Z.,Zhou, P.,Chi, J.T. MESH1 is a cytosolic NADPH phosphatase that regulates ferroptosis. Nat Metab 2020 2 270 277 6D7C 29848588 The crystal structure of hemagglutinin from A/Hong Kong/61/2016 H7N9 influenza virus 2018-04-24 2018-05-30 Yang, H.,Carney, P.J.,Chang, J.C.,Guo, Z.,Stevens, J. Structural and Molecular Characterization of the Hemagglutinin from the Fifth-Epidemic-Wave A(H7N9) Influenza Viruses. J. Virol. 2018 92 0 0 6D7U 29848588 The crystal structure of hemagglutinin from A/Guangdong/17SF003/2016 H7N9 influenza virus 2018-04-25 2018-05-30 Yang, H.,Carney, P.J.,Chang, J.C.,Guo, Z.,Stevens, J. Structural and Molecular Characterization of the Hemagglutinin from the Fifth-Epidemic-Wave A(H7N9) Influenza Viruses. J. Virol. 2018 92 0 0 6D8D 29848588 The crystal structure of hemagglutinin from A/Hong Kong/125/2017 influenza virus in complex with LSTb 2018-04-26 2018-05-30 Yang, H.,Carney, P.J.,Chang, J.C.,Guo, Z.,Stevens, J. Structural and Molecular Characterization of the Hemagglutinin from the Fifth-Epidemic-Wave A(H7N9) Influenza Viruses. J. Virol. 2018 92 0 0 6CD3 29784877 Crystal structure of 3-hydroxyanthranilate-3,4-dioxygenase I142A from Cupriavidus metallidurans in complex with 3-HAA 2018-02-07 2018-06-06 Yang, Y.,Liu, F.,Liu, A. Adapting to oxygen: 3-Hydroxyanthrinilate 3,4-dioxygenase employs loop dynamics to accommodate two substrates with disparate polarities. J. Biol. Chem. 2018 293 10415 10424 6CX6 29894638 The structure of an As(III) S-adenosylmethionine methyltransferase with As(III) and S-adenosyl-L-homocysteine (SAH) 2018-04-02 2018-06-27 Packianathan, C.,Kandavelu, P.,Rosen, B.P. The Structure of an As(III) S-Adenosylmethionine Methyltransferase with 3-Coordinately Bound As(III) Depicts the First Step in Catalysis. Biochemistry 2018 57 4083 4092 6CR7 29874056 Ternary complex crystal structure of DNA polymerase Beta with a dideoxy terminated primer with CHF, beta, gamma dATP analogue 2018-03-16 2018-07-04 Batra, V.K.,Oertell, K.,Beard, W.A.,Kashemirov, B.A.,McKenna, C.E.,Goodman, M.F.,Wilson, S.H. Mapping Functional Substrate-Enzyme Interactions in the pol beta Active Site through Chemical Biology: Structural Responses to Acidity Modification of Incoming dNTPs. Biochemistry 2018 57 3934 3944 6CER 29970614 Human pyruvate dehydrogenase complex E1 component V138M mutation 2018-02-12 2018-07-11 Whitley, M.J.,Arjunan, P.,Nemeria, N.S.,Korotchkina, L.G.,Park, Y.H.,Patel, M.S.,Jordan, F.,Furey, W. Pyruvate dehydrogenase complex deficiency is linked to regulatory loop disorder in the alpha V138M variant of human pyruvate dehydrogenase. J. Biol. Chem. 2018 293 13204 13213 6CR5 29874056 Ternary complex crystal structure of DNA polymerase Beta with a dideoxy terminated primer with CH2-beta, gamma dATP analogue 2018-03-16 2018-07-18 Batra, V.K.,Oertell, K.,Beard, W.A.,Kashemirov, B.A.,McKenna, C.E.,Goodman, M.F.,Wilson, S.H. Mapping Functional Substrate-Enzyme Interactions in the pol beta Active Site through Chemical Biology: Structural Responses to Acidity Modification of Incoming dNTPs. Biochemistry 2018 57 3934 3944 6DZS Mycobacterial homoserine dehydrogenase ThrA in complex with NADP 2018-07-05 2018-07-18 Chaton, C.T.,Rodriguez, E.S.,Korotkov, K.V. Structure of mycobacterial homoserine dehydrogenase ThrA To be Published 0 0 0 0 6BHS 30069050 HIV-1 CA hexamer in complex with IP6, hexagonal crystal form 2017-10-31 2018-08-01 Dick, R.A.,Zadrozny, K.K.,Xu, C.,Schur, F.K.M.,Lyddon, T.D.,Ricana, C.L.,Wagner, J.M.,Perilla, J.R.,Ganser-Pornillos, B.K.,Johnson, M.C.,Pornillos, O.,Vogt, V.M. Inositol phosphates are assembly co-factors for HIV-1. Nature 2018 560 509 512 6D0O 30828945 rdpA dioxygenase holoenzyme 2018-04-10 2018-08-15 Larue, C.T.,Goley, M.,Shi, L.,Evdokimov, A.G.,Sparks, O.C.,Ellis, C.,Wollacott, A.M.,Rydel, T.J.,Halls, C.E.,Van Scoyoc, B.,Fu, X.,Nageotte, J.R.,Adio, A.M.,Zheng, M.,Sturman, E.J.,Garvey, G.S.,Varagona, M.J. Development of enzymes for robust aryloxyphenoxypropionate and synthetic auxin herbicide tolerance traits in maize and soybean crops. Pest Manag. Sci. 2019 75 2086 2094 6D3I 30828945 ftv7 dioxygenase with 2,4-D bound 2018-04-16 2018-08-15 Larue, C.T.,Goley, M.,Shi, L.,Evdokimov, A.G.,Sparks, O.C.,Ellis, C.,Wollacott, A.M.,Rydel, T.J.,Halls, C.E.,Van Scoyoc, B.,Fu, X.,Nageotte, J.R.,Adio, A.M.,Zheng, M.,Sturman, E.J.,Garvey, G.S.,Varagona, M.J. Development of enzymes for robust aryloxyphenoxypropionate and synthetic auxin herbicide tolerance traits in maize and soybean crops. Pest Manag. Sci. 2019 75 2086 2094 6DO8 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 80 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DO9 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 120 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOB 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 200 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOC 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 240 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOD 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 360 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOE 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 420 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOF 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 540 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOG 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 600 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOJ 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 5 mM K+ for 120 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOK 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 25 mM K+ for 120 s at 21 C (dataset 1) 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOL 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 25 mM K+ for 120 s at 21 C (dataset 2) 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOM 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 50 mM K+ for 120 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DON 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 100 mM K+ for 120 s at 21 C (dataset 1) 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOO 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 100 mM K+ for 120 s at 21 C (dataset 2) 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOP 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 120 s at 21 C (dataset 1) 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOQ 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 120 s at 21 C (dataset 2) 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOR 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 300 mM K+ for 120 s at 21 C (dataset 1) 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOS 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 300 mM K+ for 120 s at 21 C (dataset 2) 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOT 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 200 mM Rb+ for 40 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOU 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 200 mM Rb+ for 120 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOV 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 200 mM Rb+ for 80 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOW 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 200 mM Rb+ for 160 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOX 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 200 mM Rb+ for 360 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DOY 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM Li+ for 120 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DP0 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2.5 mM Mg2+ and 75 mM K+ for 40 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DP1 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 75 mM K+ for 40 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DP8 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 200 mM Li+ for 240 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DP9 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mn2+ and 200 mM K+ for 40 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DPA 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 4 mM Mn2+ and 200 mM K+ for 40 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DPB 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 8 mM Mn2+ and 200 mM K+ for 40 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DPF 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 40 mM Mn2+ and 200 mM K+ for 40 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DPH 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 E188A in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mn2+ and 200 mM K+ for 120 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DPI 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with an RNA/DNA Hybrid: Reaction in 10 mM Mg2+ and 200 mM Rb+ for 40 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DPJ 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with an RNA/DNA Hybrid: Reaction in 4 mM Mn2+ and 200 mM K+ for 80 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DPK 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with an RNA/DNA Hybrid: Reaction in 4 mM Mn2+ and 200 mM K+ for 240 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DPL 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with an RNA/DNA Hybrid: Reaction in 10 mM Mg2+ and 200 mM Rb+ for 720 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DPM 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with an RNA/DNA Hybrid: Reaction in 10 mM Mg2+ and 200 mM Rb+ for 1800 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DPN 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 E188A in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 200 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DPO 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 E188A in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 360 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6DPP 30076410 Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 200 mM Rb+ for 240 s at 21 C 2018-06-09 2018-08-15 Samara, N.L.,Yang, W. Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol. 2018 25 715 721 6AP9 Crystal Structure of hGSTP1-1 with S-nitrosation of Cys101 2017-08-17 2018-08-22 Kumari, V.,Dyba, M.A.,Ji, X. Cysteine S-nitrosylation of hGSTP1-1 by nitric oxide (NO)-releasing prodrugs to be published 0 0 0 0 6CLU 30065703 Staphylococcus aureus Dihydropteroate Synthase (saDHPS) F17L E208K double mutant structure 2018-03-02 2018-08-22 Griffith, E.C.,Wallace, M.J.,Wu, Y.,Kumar, G.,Gajewski, S.,Jackson, P.,Phelps, G.A.,Zheng, Z.,Rock, C.O.,Lee, R.E.,White, S.W. The Structural and Functional Basis for Recurring Sulfa Drug Resistance Mutations inStaphylococcus aureusDihydropteroate Synthase. Front Microbiol 2018 9 1369 1369 5YKA 30092253 Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with cobalt(II) 2017-10-12 2018-09-05 Joo, S.H.,Pemble, C.W.,Yang, E.G.,Raetz, C.R.H.,Chung, H.S. Biochemical and Structural Insights into an Fe(II)/ alpha-Ketoglutarate/O2-Dependent Dioxygenase, Kdo 3-Hydroxylase (KdoO). J. Mol. Biol. 2018 430 4036 4048 5YVZ 30092253 Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with alphaketoglutarate and Fe(III) 2017-11-28 2018-09-05 Joo, S.H.,Pemble, C.W.,Yang, E.G.,Raetz, C.R.H.,Chung, H.S. Biochemical and Structural Insights into an Fe(II)/ alpha-Ketoglutarate/O2-Dependent Dioxygenase, Kdo 3-Hydroxylase (KdoO). J. Mol. Biol. 2018 430 4036 4048 5YW0 30092253 Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with succinate and Fe(III) 2017-11-28 2018-09-05 Joo, S.H.,Pemble, C.W.,Yang, E.G.,Raetz, C.R.H.,Chung, H.S. Biochemical and Structural Insights into an Fe(II)/ alpha-Ketoglutarate/O2-Dependent Dioxygenase, Kdo 3-Hydroxylase (KdoO). J. Mol. Biol. 2018 430 4036 4048 6A2E 30092253 Apo structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase 2018-06-11 2018-09-05 Joo, S.H.,Pemble, C.W.,Yang, E.G.,Raetz, C.R.H.,Chung, H.S. Biochemical and Structural Insights into an Fe(II)/ alpha-Ketoglutarate/O2-Dependent Dioxygenase, Kdo 3-Hydroxylase (KdoO). J. Mol. Biol. 2018 430 4036 4048 6ATH 30976006 Cdk2/cyclin A/p27-KID-deltaC 2017-08-29 2018-09-12 Tsytlonok, M.,Sanabria, H.,Wang, Y.,Felekyan, S.,Hemmen, K.,Phillips, A.H.,Yun, M.K.,Waddell, M.B.,Park, C.G.,Vaithiyalingam, S.,Iconaru, L.,White, S.W.,Tompa, P.,Seidel, C.A.M.,Kriwacki, R. Dynamic anticipation by Cdk2/Cyclin A-bound p27 mediates signal integration in cell cycle regulation. Nat Commun 2019 10 1676 1676 6ATO Crystal structure of hGSTA1-1 complexed with GSH and MPD in each subunit 2017-08-29 2018-09-12 Kumari, V.,Ji, X. The dynamic nature of hGSTA1-1 C-terminal helix To be published 0 0 0 0 6ATR Crystal structure of hGSTA1-1 complexed with two GSH analogues in each subunit 2017-08-29 2018-09-12 Kumari, V.,Ji, X. hGSTA1 apo structure and dynamic c-terminus helix To be published 0 0 0 0 6AWU Structure of PR 10 Allergen Ara h 8.01 in complex with caffeic acid 2017-09-06 2018-09-12 Offermann, L.R.,Yarbrough, J.,McBride, J.,Hurlburt, B.K.,Maleki, S.J.,Pote, S.S.,Chruszcz, M. Structure of PR-10 Allergen Ara h 8.01. To Be Published 0 0 0 0 6E4R 30158631 Crystal Structure of the Drosophila Melanogaster Polypeptide N-Acetylgalactosaminyl Transferase PGANT9B 2018-07-18 2018-09-12 Ji, S.,Samara, N.L.,Revoredo, L.,Zhang, L.,Tran, D.T.,Muirhead, K.,Tabak, L.A.,Ten Hagen, K.G. A molecular switch orchestrates enzyme specificity and secretory granule morphology. Nat Commun 2018 9 3508 3508 6M7O 30275308 Human DNA polymerase eta ternary complex with Mn2+ and dTMPNPP oppositing cdA 2018-08-20 2018-09-12 Weng, P.J.,Gao, Y.,Gregory, M.T.,Wang, P.,Wang, Y.,Yang, W. Bypassing a 8,5'-cyclo-2'-deoxyadenosine lesion by human DNA polymerase eta at atomic resolution. Proc. Natl. Acad. Sci. U.S.A. 2018 115 10660 10665 6M7T 30275308 Human DNA polymerase eta in a non-productive ternary complex with Ca2+ and dTTP oppositing cdA 2018-08-21 2018-09-12 Weng, P.J.,Gao, Y.,Gregory, M.T.,Wang, P.,Wang, Y.,Yang, W. Bypassing a 8,5'-cyclo-2'-deoxyadenosine lesion by human DNA polymerase eta at atomic resolution. Proc. Natl. Acad. Sci. U.S.A. 2018 115 10660 10665 6M7U 30275308 Human DNA polymerase eta in a non-productive ternary complex with Mg2+ and dTMPNPP oppositing cdA 2018-08-21 2018-09-12 Weng, P.J.,Gao, Y.,Gregory, M.T.,Wang, P.,Wang, Y.,Yang, W. Bypassing a 8,5'-cyclo-2'-deoxyadenosine lesion by human DNA polymerase eta at atomic resolution. Proc. Natl. Acad. Sci. U.S.A. 2018 115 10660 10665 6M7V 30275308 Human DNA polymerase eta extension complex with cdA at the -1 position 2018-08-21 2018-09-12 Weng, P.J.,Gao, Y.,Gregory, M.T.,Wang, P.,Wang, Y.,Yang, W. Bypassing a 8,5'-cyclo-2'-deoxyadenosine lesion by human DNA polymerase eta at atomic resolution. Proc. Natl. Acad. Sci. U.S.A. 2018 115 10660 10665 6D65 30198887 Crystal structure of the human dual specificity phosphatase 1 catalytic domain (C258S) as a maltose binding protein fusion in complex with the designed AR protein off7 2018-04-20 2018-09-19 Gumpena, R.,Lountos, G.T.,Waugh, D.S. MBP-binding DARPins facilitate the crystallization of an MBP fusion protein. Acta Crystallogr F Struct Biol 2018 74 549 557 6B9I 30429218 The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with 14-Methylhexadecanoic Acid (Anteiso C17:0) to 1.93 Angstrom resolution 2017-10-10 2018-10-10 Cuypers, M.G.,Subramanian, C.,Gullett, J.M.,Frank, M.W.,White, S.W.,Rock, C.O. Acyl-chain selectivity and physiological roles ofStaphylococcus aureusfatty acid-binding proteins. J. Biol. Chem. 2019 294 38 49 6DUR 30260636 Citrobacter freundii tyrosine phenol-lyase complexed with L-phenylalanine 2018-06-21 2018-10-10 Phillips, R.S.,Craig, S. Crystal Structures of Wild-Type and F448A Mutant Citrobacter freundii Tyrosine Phenol-Lyase Complexed with a Substrate and Inhibitors: Implications for the Reaction Mechanism. Biochemistry 2018 57 6166 6179 6DVX 30260636 Citrobacter freundii tyrosine phenol-lyase F448A mutant complexed with L-phenylalanine 2018-06-25 2018-10-10 Phillips, R.S.,Craig, S. Crystal Structures of Wild-Type and F448A Mutant Citrobacter freundii Tyrosine Phenol-Lyase Complexed with a Substrate and Inhibitors: Implications for the Reaction Mechanism. Biochemistry 2018 57 6166 6179 6DIL 30288468 HIV-1 protease with single mutation L76V in complex with tipranavir 2018-05-23 2018-10-17 Wong-Sam, A.,Wang, Y.F.,Zhang, Y.,Ghosh, A.K.,Harrison, R.W.,Weber, I.T. Drug Resistance Mutation L76V Alters Nonpolar Interactions at the Flap-Core Interface of HIV-1 Protease. ACS Omega 2018 3 12132 12140 6DJ2 30288468 HIV-1 protease with single mutation L76V in complex with Lopinavir 2018-05-24 2018-10-17 Wong-Sam, A.,Wang, Y.F.,Zhang, Y.,Ghosh, A.K.,Harrison, R.W.,Weber, I.T. Drug Resistance Mutation L76V Alters Nonpolar Interactions at the Flap-Core Interface of HIV-1 Protease. ACS Omega 2018 3 12132 12140 6DJ5 30288468 HIV-1 protease with mutation L76V in complex with GRL-0519 (tris-tetrahydrofuran as P2 ligand) 2018-05-24 2018-10-17 Wong-Sam, A.,Wang, Y.F.,Zhang, Y.,Ghosh, A.K.,Harrison, R.W.,Weber, I.T. Drug Resistance Mutation L76V Alters Nonpolar Interactions at the Flap-Core Interface of HIV-1 Protease. ACS Omega 2018 3 12132 12140 6MRO Crystal structure of methyl transferase from Methanosarcina acetivorans at 1.6 Angstroms resolution, Northeast Structural Genomics Consortium (NESG) Target MvR53. 2018-10-15 2018-10-24 Singh, S.,Forouhar, F.,Wang, C.,Vorobiev, S.M.,Neky, M.J.,Hunt, J.F. Crystal structure of a methyl transferase from Methanosarcina acetivorans at 1.6 Angstroms resolution. To Be Published 0 0 0 0 5Y9I Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with Co(II) 2017-08-25 2018-10-31 Chung, H.S.,Pemble IV, C.W.,Joo, S.H. Biochemical and structural insights of Fe(II)/alpha-ketoglutarate/O2-dependent dioxygenase, KdoO from Methylacidiphilum infernorum V4 To Be Published 0 0 0 0 5Y9X Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with alphaketoglutarate and coblat(II) 2017-08-29 2018-10-31 Chung, H.S.,Pemble IV, C.W.,Joo, S.H. Biochemical and structural insights of Fe(II)/alpha-ketoglutarate/O2-dependent dioxygenase, KdoO from Methylacidiphilum infernorum V4 To Be Published 0 0 0 0 5Y9Y Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with succinate and Co(II) 2017-08-29 2018-10-31 Chung, H.S.,Pemble IV, C.W.,Joo, S.H. Biochemical and structural insights of Fe(II)/alpha-ketoglutarate/O2-dependent dioxygenase, KdoO from Methylacidiphilum infernorum V4 To Be Published 0 0 0 0 6MC2 30384604 Crystal structure of a tetrameric DNA fold-back quadruplex 2018-08-30 2018-11-14 Chu, B.,Zhang, D.,Hwang, W.,Paukstelis, P.J. Crystal Structure of a Tetrameric DNA Fold-Back Quadruplex. J. Am. Chem. Soc. 2018 140 16291 16298 6ALW 30429218 The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with 12-Methyl Myristic Acid (C15:0) to 1.63 Angstrom resolution 2017-08-08 2018-11-21 Cuypers, M.G.,Subramanian, C.,Gullett, J.M.,Frank, M.W.,White, S.W.,Rock, C.O. Acyl-chain selectivity and physiological roles ofStaphylococcus aureusfatty acid-binding proteins. J. Biol. Chem. 2019 294 38 49 6DQ5 30392349 LINKED KDM5A JMJ DOMAIN BOUND TO THE INHIBITOR N43 i.e. 3-((6-(4-acryloyl-1,4-diazepan-1-yl)-2-(pyridin-2-yl)pyrimidin-4-yl)amino)propanoic acid 2018-06-10 2018-11-21 Horton, J.R.,Woodcock, C.B.,Chen, Q.,Liu, X.,Zhang, X.,Shanks, J.,Rai, G.,Mott, B.T.,Jansen, D.J.,Kales, S.C.,Henderson, M.J.,Cyr, M.,Pohida, K.,Hu, X.,Shah, P.,Xu, X.,Jadhav, A.,Maloney, D.J.,Hall, M.D.,Simeonov, A.,Fu, H.,Vertino, P.M.,Cheng, X. Structure-Based Engineering of Irreversible Inhibitors against Histone Lysine Demethylase KDM5A. J. Med. Chem. 2018 61 10588 10601 6DQ9 30392349 Linked KDM5A JMJ Domain Bound to the Covalent Inhibitor N69 i.e. [2-((3-acrylamidophenyl)(2-(piperidin-1-yl)ethoxy)methyl)thieno[3,2-b]pyridine-7-carboxylic acid] 2018-06-10 2018-11-21 Horton, J.R.,Woodcock, C.B.,Chen, Q.,Liu, X.,Zhang, X.,Shanks, J.,Rai, G.,Mott, B.T.,Jansen, D.J.,Kales, S.C.,Henderson, M.J.,Cyr, M.,Pohida, K.,Hu, X.,Shah, P.,Xu, X.,Jadhav, A.,Maloney, D.J.,Hall, M.D.,Simeonov, A.,Fu, H.,Vertino, P.M.,Cheng, X. Structure-Based Engineering of Irreversible Inhibitors against Histone Lysine Demethylase KDM5A. J. Med. Chem. 2018 61 10588 10601 6CQU 30462502 Crystal Structure of Recombinant Human Acetylcholinesterase with Reactivator HI-6 2018-03-16 2018-12-05 Bester, S.M.,Guelta, M.A.,Cheung, J.,Winemiller, M.D.,Bae, S.Y.,Myslinski, J.,Pegan, S.D.,Height, J.J. Structural Insights of Stereospecific Inhibition of Human Acetylcholinesterase by VX and Subsequent Reactivation by HI-6. Chem. Res. Toxicol. 2018 31 1405 1417 6CQX 30462502 Crystal Structure of Recombinant Human Acetylcholinesterase Inhibited by VX(+) 2018-03-16 2018-12-05 Bester, S.M.,Guelta, M.A.,Cheung, J.,Winemiller, M.D.,Bae, S.Y.,Myslinski, J.,Pegan, S.D.,Height, J.J. Structural Insights of Stereospecific Inhibition of Human Acetylcholinesterase by VX and Subsequent Reactivation by HI-6. Chem. Res. Toxicol. 2018 31 1405 1417 6B4S Crystal Structure of Brazil nut (Bertholletia excelsa) allergen Ber e 2 2017-09-27 2018-12-12 Zhang, Y.Z.,Guo, F. Crystal Structure of Brazil nut (Bertholletia excelsa) allergen Ber e 2 to be published 0 0 0 0 6B4S Crystal Structure of Brazil nut (Bertholletia excelsa) allergen Ber e 2 2017-09-27 2018-12-12 Zhang, Y.Z.,Guo, F. Crystal Structure of Brazil nut (Bertholletia excelsa) allergen Ber e 2 to be published 0 0 0 0 6CH5 29949340 Dehaloperoxidase B in complex with substrate 4-Nitroguaiacol 2018-02-21 2019-01-16 McGuire, A.H.,Carey, L.M.,de Serrano, V.,Dali, S.,Ghiladi, R.A. Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase. Biochemistry 2018 57 4455 4468 6CH6 29949340 Dehaloperoxidase B in complex with substrate 2,4-dimethoxyphenol 2018-02-22 2019-01-16 McGuire, A.H.,Carey, L.M.,de Serrano, V.,Dali, S.,Ghiladi, R.A. Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase. Biochemistry 2018 57 4455 4468 6C5Z Human UDP-Glucose Dehydrogenase A225L substitutuion with UDP-glucose and NADH bound 2018-01-17 2019-01-23 Gross, P.G.,Wood, Z.A. The A225L Substitution of hUGDH alters structure and function To Be Published 0 0 0 0 6M8D 30624931 Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with diosmetin 2018-08-21 2019-01-23 Gu, C.,Stashko, M.A.,Puhl-Rubio, A.C.,Chakraborty, M.,Chakraborty, A.,Frye, S.V.,Pearce, K.H.,Wang, X.,Shears, S.B.,Wang, H. Inhibition of Inositol Polyphosphate Kinases by Quercetin and Related Flavonoids: A Structure-Activity Analysis. J. Med. Chem. 2019 62 1443 1454 6E2A 30246917 Crystal structure of NADH:quinone reductase PA1024 from Pseudomonas aeruginosa PAO1 in complex with NAD+ 2018-07-10 2019-02-06 Ball, J.,Reis, R.A.G.,Agniswamy, J.,Weber, I.T.,Gadda, G. Steric hindrance controls pyridine nucleotide specificity of a flavin-dependent NADH:quinone oxidoreductase. Protein Sci. 2019 28 167 175 6CPT 30231198 crystal structure of yeast caPDE2 in complex with IBMX 2018-03-14 2019-02-20 Yao, T.,Huang, Y.,Zhang, M.,Chen, Y.,Pei, H.,Shi, J.,Wang, H.,Wang, Y.,Ke, H. Crystal Structures of Candida albicans Phosphodiesterase 2 and Implications for Its Biological Functions. Biochemistry 2018 57 6070 6077 6EFV 30654136 The NADPH-dependent sulfite reductase flavoprotein adopts an extended conformation that is unique to this diflavin reductase 2018-08-17 2019-02-27 Tavolieri, A.M.,Murray, D.T.,Askenasy, I.,Pennington, J.M.,McGarry, L.,Stanley, C.B.,Stroupe, M.E. NADPH-dependent sulfite reductase flavoprotein adopts an extended conformation unique to this diflavin reductase. J. Struct. Biol. 2019 205 170 179 6CKE 29949340 Dehaloperoxidase B in complex with 4-Br-guaiacol 2018-02-27 2019-03-06 McGuire, A.H.,Carey, L.M.,de Serrano, V.,Dali, S.,Ghiladi, R.A. Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase. Biochemistry 2018 57 4455 4468 6M9X 30797856 X-ray Structure of Branchiostoma floridae fluorescent protein lanFP10A 2018-08-24 2019-03-13 Muslinkina, L.,Roldan-Salgado, A.,Gaytan, P.,Juarez-Gonzalez, V.R.,Rudino, E.,Pletneva, N.,Pletnev, V.,Dauter, Z.,Pletnev, S. Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue. J. Mol. Biol. 2019 431 1397 1408 6M9Y 30797856 X-ray Structure of Branchiostoma floridae fluorescent protein lanFP6A 2018-08-24 2019-03-13 Muslinkina, L.,Roldan-Salgado, A.,Gaytan, P.,Juarez-Gonzalez, V.R.,Rudino, E.,Pletneva, N.,Pletnev, V.,Dauter, Z.,Pletnev, S. Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue. J. Mol. Biol. 2019 431 1397 1408 6MAS 30797856 X-ray Structure of Branchiostoma floridae fluorescent protein lanFP10G 2018-08-28 2019-03-13 Muslinkina, L.,Roldan-Salgado, A.,Gaytan, P.,Juarez-Gonzalez, V.R.,Rudino, E.,Pletneva, N.,Pletnev, V.,Dauter, Z.,Pletnev, S. Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue. J. Mol. Biol. 2019 431 1397 1408 6NAX 30802039 Olfactomedin domain of mouse myocilin 2018-12-06 2019-03-13 Patterson-Orazem, A.C.,Hill, S.E.,Wang, Y.,Dominic, I.M.,Hall, C.K.,Lieberman, R.L. Differential Misfolding Properties of Glaucoma-Associated Olfactomedin Domains from Humans and Mice. Biochemistry 2019 58 1718 1727 6CO5 29949340 Dehaloperoxidase B in complex with 6-Br-ortho-guaiacol 2018-03-12 2019-03-20 McGuire, A.H.,Carey, L.M.,de Serrano, V.,Dali, S.,Ghiladi, R.A. Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase. Biochemistry 2018 57 4455 4468 6CRE 29949340 Dehaloperoxidase B in complex with 5-Br-ortho-guaiacol 2018-03-17 2019-03-20 McGuire, A.H.,Carey, L.M.,de Serrano, V.,Dali, S.,Ghiladi, R.A. Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase. Biochemistry 2018 57 4455 4468 6O93 D-alanyl transferase DltD from Enterococcus faecalis 2019-03-12 2019-03-27 Shakhashiro, M.,Williamson, Z.A.,Korotkova, N.,Korotkov, K.V. D-alanyl transferase DltD from Enterococcus faecalis To Be Published 0 0 0 0 6M90 30926793 Monophosphorylated pSer33 b-Catenin peptide, b-TrCP/Skp1, NRX-2776 ternary complex 2018-08-22 2019-04-03 Simonetta, K.R.,Taygerly, J.,Boyle, K.,Basham, S.E.,Padovani, C.,Lou, Y.,Cummins, T.J.,Yung, S.L.,von Soly, S.K.,Kayser, F.,Kuriyan, J.,Rape, M.,Cardozo, M.,Gallop, M.A.,Bence, N.F.,Barsanti, P.A.,Saha, A. Prospective discovery of small molecule enhancers of an E3 ligase-substrate interaction. Nat Commun 2019 10 1402 1402 6M9Z 30797856 X-ray Structure of Branchiostoma floridae fluorescent protein lanFP6G 2018-08-24 2019-04-03 Muslinkina, L.,Roldan-Salgado, A.,Gaytan, P.,Juarez-Gonzalez, V.R.,Rudino, E.,Pletneva, N.,Pletnev, V.,Dauter, Z.,Pletnev, S. Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue. J. Mol. Biol. 2019 431 1397 1408 6MTF 30926880 D7 protein from Phlebotomus duboscqi, native 2018-10-19 2019-04-10 Jablonka, W.,Kim, I.H.,Alvarenga, P.H.,Valenzuela, J.G.,Ribeiro, J.M.C.,Andersen, J.F. Functional and structural similarities of D7 proteins in the independently-evolved salivary secretions of sand flies and mosquitoes. Sci Rep 2019 9 5340 5340 6D1A 31483651 Crystal structure of NDM-1 complexed with compound 1 2018-04-11 2019-04-17 Pemberton, O.A.,Jaishankar, P.,Akhtar, A.,Adams, J.L.,Shaw, L.N.,Renslo, A.R.,Chen, Y. Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases. J.Med.Chem. 2019 62 8480 8496 6D1B 31483651 Crystal structure of NDM-1 complexed with compound 2 2018-04-11 2019-04-17 Pemberton, O.A.,Jaishankar, P.,Akhtar, A.,Adams, J.L.,Shaw, L.N.,Renslo, A.R.,Chen, Y. Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases. J.Med.Chem. 2019 62 8480 8496 6D1C 31483651 Crystal structure of NDM-1 complexed with compound 3 2018-04-11 2019-04-17 Pemberton, O.A.,Jaishankar, P.,Akhtar, A.,Adams, J.L.,Shaw, L.N.,Renslo, A.R.,Chen, Y. Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases. J.Med.Chem. 2019 62 8480 8496 6D1E 31483651 Crystal structure of NDM-1 complexed with compound 7 2018-04-11 2019-04-17 Pemberton, O.A.,Jaishankar, P.,Akhtar, A.,Adams, J.L.,Shaw, L.N.,Renslo, A.R.,Chen, Y. Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases. J.Med.Chem. 2019 62 8480 8496 6D1F 31483651 Crystal structure of NDM-1 complexed with compound 8 2018-04-11 2019-04-17 Pemberton, O.A.,Jaishankar, P.,Akhtar, A.,Adams, J.L.,Shaw, L.N.,Renslo, A.R.,Chen, Y. Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases. J.Med.Chem. 2019 62 8480 8496 6D1G 31483651 Crystal structure of NDM-1 complexed with compound 9 2018-04-11 2019-04-17 Pemberton, O.A.,Jaishankar, P.,Akhtar, A.,Adams, J.L.,Shaw, L.N.,Renslo, A.R.,Chen, Y. Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases. J.Med.Chem. 2019 62 8480 8496 6D1H 31483651 Crystal structure of NDM-1 complexed with compound 11 2018-04-11 2019-04-17 Pemberton, O.A.,Jaishankar, P.,Akhtar, A.,Adams, J.L.,Shaw, L.N.,Renslo, A.R.,Chen, Y. Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases. J.Med.Chem. 2019 62 8480 8496 6D1I 31483651 Crystal structure of NDM-1 complexed with compound 12 2018-04-11 2019-04-17 Pemberton, O.A.,Jaishankar, P.,Akhtar, A.,Adams, J.L.,Shaw, L.N.,Renslo, A.R.,Chen, Y. Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases. J.Med.Chem. 2019 62 8480 8496 6D1J 31483651 Crystal structure of NDM-1 complexed with compound 13 2018-04-11 2019-04-17 Pemberton, O.A.,Jaishankar, P.,Akhtar, A.,Adams, J.L.,Shaw, L.N.,Renslo, A.R.,Chen, Y. Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases. J.Med.Chem. 2019 62 8480 8496 6D1K 31483651 Crystal structure of NDM-1 complexed with compound 14 2018-04-11 2019-04-17 Pemberton, O.A.,Jaishankar, P.,Akhtar, A.,Adams, J.L.,Shaw, L.N.,Renslo, A.R.,Chen, Y. Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases. J.Med.Chem. 2019 62 8480 8496 6MEY 30942078 Crystal structure of KPC-2 with compound 9 2018-09-07 2019-04-17 Torelli, N.J.,Akhtar, A.,DeFrees, K.,Jaishankar, P.,Pemberton, O.A.,Zhang, X.,Johnson, C.,Renslo, A.R.,Chen, Y. Active-Site Druggability of Carbapenemases and Broad-Spectrum Inhibitor Discovery. Acs Infect Dis. 2019 5 1013 1021 6MLL 30942078 Crystal structure of KPC-2 with compound 7 2018-09-27 2019-04-17 Torelli, N.J.,Akhtar, A.,DeFrees, K.,Jaishankar, P.,Pemberton, O.A.,Zhang, X.,Johnson, C.,Renslo, A.R.,Chen, Y. Active-Site Druggability of Carbapenemases and Broad-Spectrum Inhibitor Discovery. Acs Infect Dis. 2019 5 1013 1021 6D69 32223900 Crystal Structure of the NHL Repeat Region of D. melanogaster Thin 2018-04-20 2019-04-24 Bawa, S.,Brooks, D.S.,Neville, K.E.,Tipping, M.,Sagar, M.A.,Kollhoff, J.A.,Chawla, G.,Geisbrecht, B.V.,Tennessen, J.M.,Eliceiri, K.W.,Geisbrecht, E.R. DrosophilaTRIM32 cooperates with glycolytic enzymes to promote cell growth. Elife 2020 9 0 0 6DD0 31483651 Crystal structure of VIM-2 complexed with compound 8 2018-05-08 2019-05-08 Pemberton, O.A.,Jaishankar, P.,Akhtar, A.,Adams, J.L.,Shaw, L.N.,Renslo, A.R.,Chen, Y. Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases. J.Med.Chem. 2019 62 8480 8496 6DD1 31483651 Crystal structure of VIM-2 complexed with compound 14 2018-05-08 2019-05-08 Pemberton, O.A.,Jaishankar, P.,Akhtar, A.,Adams, J.L.,Shaw, L.N.,Renslo, A.R.,Chen, Y. Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases. J.Med.Chem. 2019 62 8480 8496 6DIE 31199869 Crystal structure of Tdp1 catalytic domain in complex with Zenobia fragment benzene-1,2,4-tricarboxylic acid from single soak 2018-05-23 2019-05-29 Lountos, G.T.,Zhao, X.Z.,Kiselev, E.,Tropea, J.E.,Needle, D.,Pommier, Y.,Burke, T.R.,Waugh, D.S. Identification of a ligand binding hot spot and structural motifs replicating aspects of tyrosyl-DNA phosphodiesterase I (TDP1) phosphoryl recognition by crystallographic fragment cocktail screening. Nucleic Acids Res. 2019 47 10134 10150 6DIM 31199869 Crystal structure of Tdp1 catalytic domain in complex with Zenobia fragment ZT1982 from cocktail soak 2018-05-23 2019-05-29 Lountos, G.T.,Zhao, X.Z.,Kiselev, E.,Tropea, J.E.,Needle, D.,Pommier, Y.,Burke, T.R.,Waugh, D.S. Identification of a ligand binding hot spot and structural motifs replicating aspects of tyrosyl-DNA phosphodiesterase I (TDP1) phosphoryl recognition by crystallographic fragment cocktail screening. Nucleic Acids Res. 2019 47 10134 10150 6DJD 31199869 Crystal structure of Tdp1 catalytic domain in complex with Zenobia fragment ZT1982 (single soak) 2018-05-25 2019-05-29 Lountos, G.T.,Zhao, X.Z.,Kiselev, E.,Tropea, J.E.,Needle, D.,Pommier, Y.,Burke, T.R.,Waugh, D.S. Identification of a ligand binding hot spot and structural motifs replicating aspects of tyrosyl-DNA phosphodiesterase I (TDP1) phosphoryl recognition by crystallographic fragment cocktail screening. Nucleic Acids Res. 2019 0 0 0 6DJI 31199869 Crystal structure of Tdp1 catalytic domain in complex with compound XZ522 2018-05-25 2019-05-29 Lountos, G.T.,Zhao, X.Z.,Kiselev, E.,Tropea, J.E.,Needle, D.,Pommier, Y.,Burke, T.R.,Waugh, D.S. Identification of a ligand binding hot spot and structural motifs replicating aspects of tyrosyl-DNA phosphodiesterase I (TDP1) phosphoryl recognition by crystallographic fragment cocktail screening. Nucleic Acids Res. 2019 47 10134 10150 6DJJ 31199869 Crystal structure of Tdp1 catalytic domain in complex with compound XZ532 2018-05-25 2019-05-29 Lountos, G.T.,Zhao, X.Z.,Kiselev, E.,Tropea, J.E.,Needle, D.,Pommier, Y.,Burke, T.R.,Waugh, D.S. Identification of a ligand binding hot spot and structural motifs replicating aspects of tyrosyl-DNA phosphodiesterase I (TDP1) phosphoryl recognition by crystallographic fragment cocktail screening. Nucleic Acids Res. 2019 47 10134 10150 6OTG 31092330 HIV-1 protease triple mutants V32I, I47V, V82I with GRL-011-11A (a methylamine bis-Tetrahydrofuran P2-Ligand, sulfonamide isostere derivate) 2019-05-03 2019-05-29 Pawar, S.,Wang, Y.F.,Wong-Sam, A.,Agniswamy, J.,Ghosh, A.K.,Harrison, R.W.,Weber, I.T. Structural studies of antiviral inhibitor with HIV-1 protease bearing drug resistant substitutions of V32I, I47V and V82I. Biochem.Biophys.Res.Commun. 2019 514 974 978 6O63 31134111 Crystal Structure of Arabidopsis thaliana Spermidine Synthase isoform 1 (AtSPDS1) 2019-03-05 2019-06-05 Sekula, B.,Dauter, Z. Spermidine Synthase (SPDS) Undergoes Concerted Structural Rearrangements Upon Ligand Binding - A Case Study of the Two SPDS Isoforms FromArabidopsis thaliana. Front Plant Sci 2019 10 555 555 6O64 31134111 Crystal Structure of Arabidopsis thaliana Spermidine Synthase isoform 2 (AtSPDS2) 2019-03-05 2019-06-05 Sekula, B.,Dauter, Z. Spermidine Synthase (SPDS) Undergoes Concerted Structural Rearrangements Upon Ligand Binding - A Case Study of the Two SPDS Isoforms FromArabidopsis thaliana. Front Plant Sci 2019 10 555 555 6O65 31134111 Crystal Structure of Arabidopsis thaliana Spermidine Synthase isoform 1 (AtSPDS1) in complex with decarboxylated S-adenosylmethionine and cyclohexylamine 2019-03-05 2019-06-05 Sekula, B.,Dauter, Z. Spermidine Synthase (SPDS) Undergoes Concerted Structural Rearrangements Upon Ligand Binding - A Case Study of the Two SPDS Isoforms FromArabidopsis thaliana. Front Plant Sci 2019 10 555 555 6DQ7 LINKED KDM5A JMJ DOMAIN BOUND TO THE POTENTIAL HYDROLYSIS PRODUCT OF INHIBITOR N45 i.e. 3-((6-(4-(2-cyano-3-methylbut-2-enoyl)-1,4-diazepan-1-yl)-2-(pyridin-2-yl)pyrimidin-4-yl)amino)propanoic acid 2018-06-10 2019-06-12 Horton, J.R.,Liu, X.,Woodcock, C.B.,Shanks, J.,Zhang, X.,Rai, G.,Mott, B.,Jansen, D.J.,Kales, S.,Henderson, M.J.,Pohida, K.,Fang, Y.,Hu, X.,Jadhav, A.,Maloney, D.,Hall, M.D.,Simeonov, A.,Fu, H.,Vertino, P.M.,Cheng, X. Structure-based Engineering of Reversible Covalent Inhibitors Against Histone Lysine Demethylase 5A To Be Published 0 0 0 0 6DQD LINKED KDM5A JMJ DOMAIN BOUND TO THE INHIBITOR N53 i.e. 2-(5-([1,1'-biphenyl]-3-yl)-4-(1-(2-(piperidin-1-yl)ethoxy)ethyl)-1H-pyrazol-1-yl)isonicotinic acid 2018-06-10 2019-06-12 Horton, J.R.,Liu, X.,Woodcock, C.B.,Shanks, J.,Zhang, X.,Rai, G.,Mott, B.,Jansen, D.J.,Kales, S.,Henderson, M.J.,Pohida, K.,Fang, Y.,Hu, X.,Jadhav, A.,Maloney, D.,Hall, M.D.,Simeonov, A.,Fu, H.,Vertino, P.M.,Cheng, X. To be determined To Be Published 0 0 0 0 6DQF LINKED KDM5A JMJ DOMAIN BOUND TO THE INHIBITOR N68 i.e. 2-(1-(2-(piperidin-1-yl)ethyl)-1H-benzo[d]imidazol-2-yl)thieno[3,2-b]pyridine-7-carboxylic acid 2018-06-10 2019-06-12 Horton, J.R.,Liu, X.,Woodcock, C.B.,Shanks, J.,Zhang, X.,Rai, G.,Mott, B.,Jansen, D.J.,Kales, S.,Henderson, M.J.,Pohida, K.,Fang, Y.,Hu, X.,Jadhav, A.,Maloney, D.,Hall, M.D.,Simeonov, A.,Fu, H.,Vertino, P.M.,Cheng, X. To be determined To Be Published 0 0 0 0 6NHH 31182483 Rhodobacter sphaeroides bc1 with azoxystrobin 2018-12-21 2019-06-19 Esser, L.,Zhou, F.,Yu, C.A.,Xia, D. Crystal structure of bacterial cytochromebc1in complex with azoxystrobin reveals a conformational switch of the Rieske iron-sulfur protein subunit. J.Biol.Chem. 2019 294 12007 12019 6OVB 31175187 Crystal structure of a Bacillus thuringiensis Cry1Da tryptic core variant 2019-05-07 2019-06-19 Wang, Y.,Wang, J.,Fu, X.,Nageotte, J.R.,Silverman, J.,Bretsnyder, E.C.,Chen, D.,Rydel, T.J.,Bean, G.J.,Li, K.S.,Kraft, E.,Gowda, A.,Nance, A.,Moore, R.G.,Pleau, M.J.,Milligan, J.S.,Anderson, H.M.,Asiimwe, P.,Evans, A.,Moar, W.J.,Martinelli, S.,Head, G.P.,Haas, J.A.,Baum, J.A.,Yang, F.,Kerns, D.L.,Jerga, A. Bacillus thuringiensis Cry1Da_7 and Cry1B.868 Protein Interactions with Novel Receptors Allow Control of Resistant Fall Armyworms, Spodoptera frugiperda (J.E. Smith). Appl.Environ.Microbiol. 2019 85 0 0 6P69 Crystal structure of FGFR1-Y563C (FGFR4 surrogate) covalently bound to compound 11. 2019-06-03 2019-06-19 Prajapati, S. To be published TBD 0 0 0 0 6N80 31187989 S. aureus ClpP bound to anti-4a 2018-11-28 2019-06-26 Tan, J.,Grouleff, J.J.,Jitkova, Y.,Diaz, D.B.,Griffith, E.C.,Shao, W.,Bogdanchikova, A.F.,Poda, G.,Schimmer, A.D.,Lee, R.E.,Yudin, A.K. De Novo Design of Boron-Based Peptidomimetics as Potent Inhibitors of Human ClpP in the Presence of Human ClpX. J.Med.Chem. 2019 62 6377 6390 6D7I CTX-M-14 Apoenzyme D233N Point Mutant 2018-04-24 2019-07-24 Nichols, D.A.,Kemp, M.T.,Chen, Y. The Role of Asp-Asp Short Hydrogen Bond in Maintaining Active Site Integrity of CTX-M Beta-Lactamase To be Published 0 0 0 0 6MNR 31263112 Rhesus macaque anti-HIV V3 antibody DH753 with gp120 V3 ZAM18 peptide 2018-10-02 2019-07-24 Han, Q.,Jones, J.A.,Nicely, N.I.,Reed, R.K.,Shen, X.,Mansouri, K.,Louder, M.,Trama, A.M.,Alam, S.M.,Edwards, R.J.,Bonsignori, M.,Tomaras, G.D.,Korber, B.,Montefiori, D.C.,Mascola, J.R.,Seaman, M.S.,Haynes, B.F.,Saunders, K.O. Difficult-to-neutralize global HIV-1 isolates are neutralized by antibodies targeting open envelope conformations. Nat Commun 2019 10 2898 2898 6MH7 30253095 Crystal structure of the first bromodomain of human BRD4 in complex with SKT-68, a 1,4,5-trisubstituted imidazole analogue 2018-09-17 2019-08-07 Divakaran, A.,Talluri, S.K.,Ayoub, A.M.,Mishra, N.K.,Cui, H.,Widen, J.C.,Berndt, N.,Zhu, J.Y.,Carlson, A.S.,Topczewski, J.J.,Schonbrunn, E.K.,Harki, D.A.,Pomerantz, W.C.K. Molecular Basis for the N-Terminal Bromodomain-and-Extra-Terminal-Family Selectivity of a Dual Kinase-Bromodomain Inhibitor. J.Med.Chem. 2018 61 9316 9334 6NXC 31363102 ECAI(T162A) MUTANT IN COMPLEX WITH CITRATE AT PH 4 2019-02-08 2019-08-07 Lubkowski, J.,Chan, W.,Wlodawer, A. Opportunistic complexes of E. coli L-asparaginases with citrate anions. Sci Rep 2019 9 11070 11070 6P52 31362987 Crystal structure of transpeptidase domain of PBP2 from Neisseria gonorrhoeae with a bound phosphate at the active site 2019-05-29 2019-08-07 Singh, A.,Tomberg, J.,Nicholas, R.A.,Davies, C. Recognition of the beta-lactam carboxylate triggers acylation ofNeisseria gonorrhoeaepenicillin-binding protein 2. J.Biol.Chem. 2019 294 14020 14032 6P55 31362987 Crystal structure of transpeptidase domain of PBP2 from Neisseria gonorrhoeae acylated by cefixime 2019-05-29 2019-08-07 Singh, A.,Tomberg, J.,Nicholas, R.A.,Davies, C. Recognition of the beta-lactam carboxylate triggers acylation ofNeisseria gonorrhoeaepenicillin-binding protein 2. J.Biol.Chem. 2019 294 14020 14032 6OMU 31368705 Structure of human Bruton's Tyrosine Kinase in complex with Evobrutinib 2019-04-19 2019-08-14 Caldwell, R.D.,Qiu, H.,Askew, B.C.,Bender, A.T.,Brugger, N.,Camps, M.,Dhanabal, M.,Dutt, V.,Eichhorn, T.,Gardberg, A.S.,Goutopoulos, A.,Grenningloh, R.,Head, J.,Healey, B.,Hodous, B.L.,Huck, B.R.,Johnson, T.L.,Jones, C.,Jones, R.C.,Mochalkin, I.,Morandi, F.,Nguyen, N.,Meyring, M.,Potnick, J.R.,Santos, D.C.,Schmidt, R.,Sherer, B.,Shutes, A.,Urbahns, K.,Follis, A.V.,Wegener, A.A.,Zimmerli, S.C.,Liu-Bujalski, L. Discovery of Evobrutinib: An Oral, Potent, and Highly Selective, Covalent Bruton's Tyrosine Kinase (BTK) Inhibitor for the Treatment of Immunological Diseases. J.Med.Chem. 2019 62 7643 7655 6NOK The X-ray crystal structure of Streptococcus pneumoniae Fatty Acid Kinase (Fak) B1 protein loaded with myristic acid (C14:0) to 1.69 Angstrom resolution 2019-01-16 2019-08-21 Cuypers, M.G.,Gullett, J.M.,Subramanian, C.,White, S.W.,Rock, C.O. The X-ray crystal structure of Streptococcus pneumoniae Fatty Acid Kinase (Fak) B1 protein loaded with myristic acid (C14:0) to 1.69 Angstrom resolution To Be Published 0 0 0 0 6NR1 The X-ray crystal structure of Streptococcus pneumoniae Fatty Acid Kinase (Fak) B2 protein loaded with Vaccenic acid (C18:1 delta11) to 2.1 Angstrom resolution 2019-01-22 2019-08-21 Cuypers, M.G.,Gullett, J.M.,Subramanian, C.,White, S.W.,Rock, C.O. The X-ray crystal structure of Streptococcus pneumoniae Fatty Acid Kinase (Fak) B2 protein loaded with Vaccenic acid (C18:1 delta11) to 2.1 Angstrom resolution To Be Published 0 0 0 0 6OJJ 31399562 Structure of ScAtg3 with truncations in N-terminal and flexible region (FR) 2019-04-11 2019-08-21 Zheng, Y.,Qiu, Y.,Grace, C.R.R.,Liu, X.,Klionsky, D.J.,Schulman, B.A. A switch element in the autophagy E2 Atg3 mediates allosteric regulation across the lipidation cascade. Nat Commun 2019 10 3600 3600 6OZE 31444105 Crystal structure of the catalytic domain of human Endonuclease V (C140S/C225S/C226A/C228S) 2019-05-15 2019-09-04 Wu, J.,Samara, N.L.,Kuraoka, I.,Yang, W. Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell 2019 76 44 0 6OZF 31444105 Crystal structure of Thermotoga maritima (Tm) Endonuclease V (D110N) in complex with a 12mer DNA containing an inosine followed by a ribo-adenosine 2019-05-15 2019-09-04 Wu, J.,Samara, N.L.,Kuraoka, I.,Yang, W. Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell 2019 76 44 0 6OZG 31444105 Crystal structure of Thermotoga maritima (Tm) Endonuclease V (E89Q) in complex with a 12mer DNA containing an inosine followed by a ribo-adenosine 2019-05-15 2019-09-04 Wu, J.,Samara, N.L.,Kuraoka, I.,Yang, W. Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell 2019 76 44 0 6OZJ 31444105 Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine in the absence of divalent cation 2019-05-15 2019-09-04 Wu, J.,Samara, N.L.,Kuraoka, I.,Yang, W. Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell 2019 76 44 0 6OZK 31444105 Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after 68h soak in Ca2+ 2019-05-15 2019-09-04 Wu, J.,Samara, N.L.,Kuraoka, I.,Yang, W. Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell 2019 76 44 0 6OZL 31444105 Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after a 2 min soak in Mn2+ 2019-05-15 2019-09-04 Wu, J.,Samara, N.L.,Kuraoka, I.,Yang, W. Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell 2019 76 44 0 6MNU 31475928 Crystal structure of Yersinia pestis UDP-glucose pyrophosphorylase 2018-10-03 2019-09-11 Gibbs, M.E.,Lountos, G.T.,Gumpena, R.,Waugh, D.S. Crystal structure of UDP-glucose pyrophosphorylase from Yersinia pestis, a potential therapeutic target against plague. Acta Crystallogr.,Sect.F 2019 75 608 615 6ONG 31445024 Dehaloperoxidate B in complex with substrate 4-F-cresol 2019-04-22 2019-09-11 Malewschik, T.,de Serrano, V.,McGuire, A.H.,Ghiladi, R.A. The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants. Arch.Biochem.Biophys. 2019 673 108079 108079 6ONK 31445024 Dehaloperoxidase B in complex with substrate 4-Cl-cresol 2019-04-22 2019-09-11 Malewschik, T.,de Serrano, V.,McGuire, A.H.,Ghiladi, R.A. The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants. Arch.Biochem.Biophys. 2019 673 108079 108079 6ONZ 31445024 Dehaloperoxidase B in complex with substtrate 4-nitro-cresol 2019-04-22 2019-09-11 Malewschik, T.,de Serrano, V.,McGuire, A.H.,Ghiladi, R.A. The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants. Arch.Biochem.Biophys. 2019 673 108079 108079 6O5T 31483651 Crystal Structure of VIM-2 with Compound 16 2019-03-04 2019-09-25 Pemberton, O.A.,Jaishankar, P.,Akhtar, A.,Adams, J.L.,Shaw, L.N.,Renslo, A.R.,Chen, Y. Heteroaryl Phosphonates as Noncovalent Inhibitors of Both Serine- and Metallocarbapenemases. J.Med.Chem. 2019 62 8480 8496 6ONR 31445024 Dehaloperoxidase B in complex with substrate 4-methyl-cresol 2019-04-22 2019-09-25 Malewschik, T.,de Serrano, V.,McGuire, A.H.,Ghiladi, R.A. The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants. Arch.Biochem.Biophys. 2019 673 108079 108079 6ONX 31445024 Dehaloperoxidase B in complex with substrate 4-Br-cresol 2019-04-22 2019-09-25 Malewschik, T.,de Serrano, V.,McGuire, A.H.,Ghiladi, R.A. The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants. Arch.Biochem.Biophys. 2019 673 108079 108079 6OO6 31445024 Dehaloperoxidase B in complex with substrate p-cresol 2019-04-22 2019-09-25 Malewschik, T.,de Serrano, V.,McGuire, A.H.,Ghiladi, R.A. The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants. Arch.Biochem.Biophys. 2019 673 108079 108079 6PXU 31548401 Crystal structure of human GalNAc-T12 bound to a diglycosylated peptide, Mn2+, and UDP 2019-07-27 2019-09-25 Fernandez, A.J.,Daniel, E.J.P.,Mahajan, S.P.,Gray, J.J.,Gerken, T.A.,Tabak, L.A.,Samara, N.L. The structure of the colorectal cancer-associated enzyme GalNAc-T12 reveals how nonconserved residues dictate its function. Proc.Natl.Acad.Sci.USA 2019 116 20404 20410 6MW5 32414843 UDP-galactose:glucoside-Skp1 alpha-D-galactosyltransferase with bound UDP and Platinum 2018-10-29 2019-10-09 Mandalasi, M.,Kim, H.W.,Thieker, D.,Sheikh, M.O.,Gas-Pascual, E.,Rahman, K.,Zhao, P.,Daniel, N.G.,van der Wel, H.,Ichikawa, H.T.,Glushka, J.N.,Wells, L.,Woods, R.J.,Wood, Z.A.,West, C.M. A terminal alpha 3-galactose modification regulates an E3 ubiquitin ligase subunit in Toxoplasma gondii . J.Biol.Chem. 2020 295 9223 9243 6MW8 32414843 UDP-galactose:glucoside-Skp1 alpha-D-galactosyltransferase with bound UDP and Manganese 2018-10-29 2019-10-09 Mandalasi, M.,Kim, H.W.,Thieker, D.,Sheikh, M.O.,Gas-Pascual, E.,Rahman, K.,Zhao, P.,Daniel, N.G.,van der Wel, H.,Ichikawa, H.T.,Glushka, J.N.,Wells, L.,Woods, R.J.,Wood, Z.A.,West, C.M. A terminal alpha 3-galactose modification regulates an E3 ubiquitin ligase subunit in Toxoplasma gondii . J.Biol.Chem. 2020 295 9223 9243 6TZS 31724696 A DNA i-motif/duplex hybrid 2019-08-13 2019-10-16 Chu, B.,Zhang, D.,Paukstelis, P.J. A DNA G-quadruplex/i-motif hybrid. Nucleic Acids Res. 2019 47 11921 11930 6N2H 30699288 Structure of D-ornithine/D-lysine decarboxylase from Salmonella typhimurium 2018-11-13 2019-10-23 Phillips, R.S.,Poteh, P.,Krajcovic, D.,Miller, K.A.,Hoover, T.R. Crystal Structure of d-Ornithine/d-Lysine Decarboxylase, a Stereoinverting Decarboxylase: Implications for Substrate Specificity and Stereospecificity of Fold III Decarboxylases. Biochemistry 2019 58 1038 1042 6PZ4 31589043 co-crystal structure of BACE with inhibitor AM-6494 2019-07-31 2019-10-23 Pettus, L.H.,Bourbeau, M.P.,Bradley, J.,Bartberger, M.D.,Chen, K.,Hickman, D.,Johnson, M.,Liu, Q.,Manning, J.R.,Nanez, A.,Siegmund, A.C.,Wen, P.H.,Whittington, D.A.,Allen, J.R.,Wood, S. Discovery of AM-6494: A Potent and Orally Efficacious beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1) Inhibitor with in Vivo Selectivity over BACE2. J.Med.Chem. 2020 63 2263 2281 6UNB 31685462 Crystal structure of CTX-M-14 in complex with temocillin 2019-10-11 2019-10-30 Sacco, M.D.,Kroeck, K.G.,Kemp, M.T.,Zhang, X.,Andrews, L.D.,Chen, Y. Influence of the alpha-Methoxy Group on the Reaction of Temocillin with Pseudomonas aeruginosa PBP3 and CTX-M-14 beta-Lactamase. Antimicrob.Agents Chemother. 2019 64 0 0 6MYZ Crystal structure of Tdp1 catalytic domain in complex with compound XZ520 2018-11-02 2019-11-06 Lountos, G.T.,Zhao, X.Z.,Kiselev, E.,Tropea, J.E.,Needle, D.,Burke Jr., T.R.,Pommier, Y.,Waugh, D.S. Structure of Tdp1 catalytic domain in complex with compound XZ520 To Be Published 0 0 0 0 6MZ0 Crystal structure of Tdp1 catalytic domain in complex with compound XZ530 2018-11-02 2019-11-06 Lountos, G.T.,Zhao, X.Z.,Kiselev, E.,Tropea, J.E.,Needle, D.,Burke Jr., T.R.,Pommier, Y.,Waugh, D.S. Structure of Tdp1 catalytic domain in complex with compound XZ530 To Be Published 0 0 0 0 6PMD 31588734 Structure of ClpP from Staphylococcus aureus in complex with Acyldepsipeptide 2019-07-01 2019-11-06 Griffith, E.C.,Zhao, Y.,Singh, A.P.,Conlon, B.P.,Tangallapally, R.,Shadrick, W.R.,Liu, J.,Wallace, M.J.,Yang, L.,Elmore, J.M.,Li, Y.,Zheng, Z.,Miller, D.J.,Cheramie, M.N.,Lee, R.B.,LaFleur, M.D.,Lewis, K.,Lee, R.E. Ureadepsipeptides as ClpP Activators. Acs Infect Dis. 2019 5 1915 1925 6DDI 32651255 Crystal Structure of the human BRD2 BD1 bromodomain in complex with a Tetrahydroquinoline analogue 2018-05-10 2019-11-13 Slavish, P.J.,Chi, L.,Yun, M.K.,Tsurkan, L.,Martinez, N.E.,Jonchere, B.,Chai, S.C.,Connelly, M.,Waddell, M.B.,Das, S.,Neale, G.,Li, Z.,Shadrick, W.R.,Olsen, R.R.,Freeman, K.W.,Low, J.A.,Price, J.E.,Young, B.M.,Bharatham, N.,Boyd, V.A.,Yang, J.,Lee, R.E.,Morfouace, M.,Roussel, M.F.,Chen, T.,Savic, D.,Guy, R.K.,White, S.W.,Shelat, A.A.,Potter, P.M. Bromodomain-Selective BET Inhibitors Are Potent Antitumor Agents against MYC-Driven Pediatric Cancer. Cancer Res. 2020 80 3507 3518 6N0O Crystal structure of Tdp1 catalytic domain in complex with compound XZ523 2018-11-07 2019-11-13 Lountos, G.T.,Zhao, X.Z.,Kiselev, E.,Tropea, J.E.,Needle, D.,Burke Jr., T.R.,Pommier, Y.,Waugh, D.S. Crystal structure of Tdp1 catalytic domain To Be Published 0 0 0 0 6PDQ 31675069 Ancestral Effector Caspase 3/6/7 2019-06-19 2019-11-13 Grinshpon, R.D.,Shrestha, S.,Titus-McQuillan, J.,Hamilton, P.T.,Swartz, P.D.,Clark, A.C. Resurrection of ancestral effector caspases identifies novel networks for evolution of substrate specificity. Biochem.J. 2019 476 3475 3492 6UEE 31664082 Pseudomonas aeruginosa LpxA Complex Structure with Ligand 2019-09-20 2019-11-13 Kroeck, K.G.,Sacco, M.D.,Smith, E.W.,Zhang, X.,Shoun, D.,Akhtar, A.,Darch, S.E.,Cohen, F.,Andrews, L.D.,Knox, J.E.,Chen, Y. Discovery of dual-activity small-molecule ligands of Pseudomonas aeruginosa LpxA and LpxD using SPR and X-ray crystallography. Sci Rep 2019 9 15450 15450 6UEG 31664082 Pseudomonas aeruginosa LpxA Complex Structure with Ligand 2019-09-20 2019-11-13 Kroeck, K.G.,Sacco, M.D.,Smith, E.W.,Zhang, X.,Shoun, D.,Akhtar, A.,Darch, S.E.,Cohen, F.,Andrews, L.D.,Knox, J.E.,Chen, Y. Discovery of dual-activity small-molecule ligands of Pseudomonas aeruginosa LpxA and LpxD using SPR and X-ray crystallography. Sci Rep 2019 9 15450 15450 6PBZ 31679177 Crystal structure of Escherichia coli GppA 2019-06-15 2019-11-20 Song, H.,Dharmasena, M.N.,Wang, C.,Shaw, G.X.,Cherry, S.,Tropea, J.E.,Jin, D.J.,Ji, X. Structure and activity of PPX/GppA homologs from Escherichia coli and Helicobacter pylori. Febs J. 2020 287 1865 1885 6TYT 31733588 Structure of Ku80 von Willebrand domain S229A mutant complexed with APLF and XLF Ku Binding Motif 2019-08-09 2019-11-27 Kim, K.,Min, J.,Kirby, T.W.,Gabel, S.A.,Pedersen, L.C.,London, R.E. Ligand binding characteristics of the Ku80 von Willebrand domain. DNA Repair (Amst.) 2019 85 102739 102739 6PBC 31889510 Structural basis for the activation of PLC-gamma isozymes by phosphorylation and cancer-associated mutations 2019-06-13 2020-01-08 Hajicek, N.,Keith, N.C.,Siraliev-Perez, E.,Temple, B.R.S.,Huang, W.,Zhang, Q.,Harden, T.K.,Sondek, J. Structural basis for the activation of PLC-gamma isozymes by phosphorylation and cancer-associated mutations. Elife 2019 8 0 0 6SMN 31873125 A. thaliana serine hydroxymethyltransferase isoform 2 (AtSHMT2) in complex with methotrexate 2019-08-22 2020-01-08 Ruszkowski, M.,Sekula, B.,Ruszkowska, A.,Contestabile, R.,Nogues, I.,Angelaccio, S.,Szczepaniak, A.,Dauter, Z. Structural basis of methotrexate and pemetrexed action on serine hydroxymethyltransferases revealed using plant models. Sci Rep 2019 9 19614 19614 6SMW 31873125 A. thaliana serine hydroxymethyltransferase isoform 2 (AtSHMT2) in complex with pemetrexed 2019-08-23 2020-01-08 Ruszkowski, M.,Sekula, B.,Ruszkowska, A.,Contestabile, R.,Nogues, I.,Angelaccio, S.,Szczepaniak, A.,Dauter, Z. Structural basis of methotrexate and pemetrexed action on serine hydroxymethyltransferases revealed using plant models. Sci Rep 2019 9 19614 19614 6NYU The X-ray crystal structure of Staphylococcus aureus Fatty Acid Kinase (Fak) B1 F263T mutant protein to 2.18 Angstrom resolution 2019-02-12 2020-02-12 Cuypers, M.G.,Gullett, J.M.,Subramanian, C.,White, S.W.,Rock, C.O. The X-ray crystal structure of STAPHYLOCOCCUS AUREUS Fatty Acid Kinase (Fak) B1 protein F263T mutant to 2.18 Angstrom resolution To Be Published 0 0 0 0 6VGH Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant In Complex with Lasofoxifene 2020-01-08 2020-02-12 Fanning, S.W. Ligand Binding Domain To Be Published 0 0 0 0 6VCX 32057875 Crystal structure of Arabidopsis thaliana S-adenosylmethionine Synthase 1 (AtMAT1) 2019-12-23 2020-02-26 Sekula, B.,Ruszkowski, M.,Dauter, Z. S-adenosylmethionine synthases in plants: Structural characterization of type I and II isoenzymes from Arabidopsis thaliana and Medicago truncatula. Int.J.Biol.Macromol. 2020 151 554 565 6VCZ 32057875 Crystal structure of Arabidopsis thaliana S-adenosylmethionine Synthase 2 (AtMAT2) 2019-12-23 2020-02-26 Sekula, B.,Ruszkowski, M.,Dauter, Z. S-adenosylmethionine synthases in plants: Structural characterization of type I and II isoenzymes from Arabidopsis thaliana and Medicago truncatula. Int.J.Biol.Macromol. 2020 151 554 565 6VD0 32057875 Crystal structure of Arabidopsis thaliana S-adenosylmethionine Synthase 2 (AtMAT2) in complex with free Methionine and AMPCPP 2019-12-23 2020-02-26 Sekula, B.,Ruszkowski, M.,Dauter, Z. S-adenosylmethionine synthases in plants: Structural characterization of type I and II isoenzymes from Arabidopsis thaliana and Medicago truncatula. Int.J.Biol.Macromol. 2020 151 554 565 6VJD Estrogen Receptor Alpha Ligand Binding Domain in Complex with Lasofoxifene 2020-01-15 2020-02-26 Fanning, S.W. Estrogen Receptor Alpha To Be Published 0 0 0 0 6V0S 32091206 Crystal structure of the bromodomain of human BRD9 bound to TG003 2019-11-19 2020-03-11 Karim, R.M.,Chan, A.,Zhu, J.Y.,Schonbrunn, E. Structural Basis of Inhibitor Selectivity in the BRD7/9 Subfamily of Bromodomains. J.Med.Chem. 2020 63 3227 3237 6VBD Crystal structure of transpeptidase domain of PBP2 from Neisseria gonorrhoeae cephalosporin-resistant strain H041 acylated by ceftriaxone 2019-12-18 2020-04-15 Singh, A.,Turner, J.,Tomberg, J.,Fedarovich, A.,Unemo, M.,Nicholas, R.A.,Davies, C. Mutations in Neisseria gonorrhoeae penicillin-binding protein 2 associated with extended-spectrum cephalosporin resistance create an energetic barrier against acylation via restriction of protein dynamics J.Biol.Chem. 2020 0 0 0 6OO8 31445024 Dehaloperoxidase B in complex with substrate pentachlorophenol 2019-04-22 2020-04-29 Malewschik, T.,de Serrano, V.,McGuire, A.H.,Ghiladi, R.A. The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants. Arch.Biochem.Biophys. 2019 673 108079 108079 6PCL 32303658 Crystal structure of human diphosphoinositol polyphosphate phosphohydrolase 1 in complex with 5-IP7 2019-06-17 2020-04-29 Dollins, D.E.,Bai, W.,Fridy, P.C.,Otto, J.C.,Neubauer, J.L.,Gattis, S.G.,Mehta, K.P.M.,York, J.D. Vip1 is a kinase and pyrophosphatase switch that regulates inositol diphosphate signaling. Proc.Natl.Acad.Sci.USA 2020 117 9356 9364 6VOD 32348139 HIV-1 wild type protease with GRL-052-16A, a tricyclic cyclohexane fused tetrahydrofuranofuran (CHf-THF) derivative as the P2 ligand 2020-01-30 2020-05-13 Ghosh, A.K.,Kovela, S.,Osswald, H.L.,Amano, M.,Aoki, M.,Agniswamy, J.,Wang, Y.F.,Weber, I.T.,Mitsuya, H. Structure-Based Design of Highly Potent HIV-1 Protease Inhibitors Containing New Tricyclic Ring P2-Ligands: Design, Synthesis, Biological, and X-ray Structural Studies. J.Med.Chem. 2020 63 4867 4879 6VOE 32348139 HIV-1 wild type protease with GRL-019-17A, a tricyclic cyclohexane fused tetrahydrofuranofuran (CHf-THF) derivative as the P2 ligand and a aminobenzothiazole(Abt)-based P2'-ligand 2020-01-30 2020-05-13 Ghosh, A.K.,Kovela, S.,Osswald, H.L.,Amano, M.,Aoki, M.,Agniswamy, J.,Wang, Y.F.,Weber, I.T.,Mitsuya, H. Structure-Based Design of Highly Potent HIV-1 Protease Inhibitors Containing New Tricyclic Ring P2-Ligands: Design, Synthesis, Biological, and X-ray Structural Studies. J.Med.Chem. 2020 63 4867 4879 6V48 The crystal structure of hemagglutinin from A/mallard/Gurjev/263/1982 (H14N5) 2019-11-27 2020-06-17 Yang, H.,Carney, P.J.,Chang, J.,Stevens, J. Molecular characterization and three-dimensional structures of avian H8, H11, H14, H15 and swine H4 influenza virus hemagglutinins Heliyon 2020 6 0 0 6V4C 32518308 Culex quinquefasciatus D7 long form 1- CxD7L1 in complex with ADP 2019-11-27 2020-06-24 Martin-Martin, I.,Paige, A.,Valenzuela Leon, P.C.,Gittis, A.G.,Kern, O.,Bonilla, B.,Chagas, A.C.,Ganesan, S.,Smith, L.B.,Garboczi, D.N.,Calvo, E. ADP binding by the Culex quinquefasciatus mosquito D7 salivary protein enhances blood feeding on mammals. Nat Commun 2020 11 2911 2911 6NTG Crystal Structure of Recombinant Human Acetylcholinesterase Inhibited by A-234 in Complex with Reactivator, HI-6 2019-01-29 2020-07-01 Height, J.J.,Bester, S.M.,Guelta, M.A.,Bae, S.Y.,Cheung, J.,Pegan, S.D. Insights into inhibition of human acetylcholinesterase by Novichok, A-series Nerve Agents To Be Published 0 0 0 0 6OOH 32774871 CTX-M-27 Beta Lactamase with Compound 14 2019-04-23 2020-07-01 DeFrees, K.,Kemp, M.T.,ElHilali-Pollard, X.,Zhang, X.,Mohamed, A.,Chen, Y.,Renslo, A.R. An Empirical Study of Amide-Heteroarene pi-Stacking Interactions Using Reversible Inhibitors of a Bacterial Serine Hydrolase. Org Chem Front 2019 6 1749 1756 6OO1 31445024 Dehaloperoxidase B in complex with substrate o-cresol 2019-04-22 2020-07-22 Malewschik, T.,de Serrano, V.,McGuire, A.H.,Ghiladi, R.A. The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants. Arch.Biochem.Biophys. 2019 673 108079 108079 6X11 32732435 Observing a ring-cleaving dioxygenase in action through a crystalline lens - an enol tautomer of ACMS monodentately bound structure 2020-05-17 2020-07-29 Wang, Y.,Liu, K.F.,Yang, Y.,Davis, I.,Liu, A. Observing 3-hydroxyanthranilate-3,4-dioxygenase in action through a crystalline lens. Proc.Natl.Acad.Sci.USA 2020 117 19720 19730 6X5H 33004438 Human Alpha-1,6-fucosyltransferase (FUT8) bound to GDP 2020-05-26 2020-10-07 Boruah, B.M.,Kadirvelraj, R.,Liu, L.,Ramiah, A.,Li, C.,Zong, G.,Bosman, G.P.,Yang, J.Y.,Wang, L.X.,Boons, G.J.,Wood, Z.A.,Moremen, K.W. Characterizing human alpha-1,6-fucosyltransferase (FUT8) substrate specificity and structural similarities with related fucosyltransferases. J.Biol.Chem. 2020 295 17027 17045 6X5R 33004438 Human Alpha-1,6-fucosyltransferase (FUT8) bound to GDP and A2-Asn 2020-05-26 2020-10-07 Boruah, B.M.,Kadirvelraj, R.,Liu, L.,Ramiah, A.,Li, C.,Zong, G.,Bosman, G.P.,Yang, J.Y.,Wang, L.X.,Boons, G.J.,Wood, Z.A.,Moremen, K.W. Characterizing human alpha-1,6-fucosyltransferase (FUT8) substrate specificity and structural similarities with related fucosyltransferases. J.Biol.Chem. 2020 295 17027 17045 6WJH 33004795 Crystal structure of MAGE-A11 bound to the PCF11 degron 2020-04-13 2020-10-14 Yang, S.W.,Huang, X.,Lin, W.,Min, J.,Miller, D.J.,Mayasundari, A.,Rodrigues, P.,Griffith, E.C.,Gee, C.T.,Li, L.,Li, W.,Lee, R.E.,Rankovic, Z.,Chen, T.,Potts, P.R. Structural basis for substrate recognition and chemical inhibition of oncogenic MAGE ubiquitin ligases. Nat Commun 2020 11 4931 4931 6WZ8 Complex of Pseudomonas 7A Glutaminase-Asparaginase with Citrate Anion at pH 5.5. Covalent Acyl-Enzyme Intermediate 2020-05-13 2020-10-14 Strzelczyk, P.,Zhang, D.,Dyba, M.,Wlodawer, A.,Lubkowski, J. Generalized enzymatic mechanism of catalysis by tetrameric L-asparaginases from mesophilic bacteria. Sci Rep 2020 10 17516 0 7JMS 33135682 Structure of the Hazara virus OTU bound to ubiquitin 2020-08-02 2020-10-21 Dzimianski, J.V.,Mace, S.L.,Williams, I.L.,Freitas, B.T.,Pegan, S.D. Flipping the substrate preference of Hazara virus ovarian tumour domain protease through structure-based mutagenesis. Acta Crystallogr D Struct Biol 2020 76 1114 1123 6WY6 33207182 Crystal structure of S. cerevisiae Atg8 in complex with Ede1 (1220-1247) 2020-05-12 2020-12-02 Wilfling, F.,Lee, C.W.,Erdmann, P.S.,Zheng, Y.,Sherpa, D.,Jentsch, S.,Pfander, B.,Schulman, B.A.,Baumeister, W. A Selective Autophagy Pathway for Phase-Separated Endocytic Protein Deposits. Mol.Cell 2020 80 764 0 7KDO 33199204 Crystal structure of Escherichia coli HPPK in complex with bisubstrate inhibitor HP-73 2020-10-09 2020-12-02 Shi, G.,Shaw, G.X.,Zhu, F.,Tarasov, S.G.,Ji, X. Bisubstrate inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: Transition state analogs for high affinity binding. Bioorg.Med.Chem. 2021 29 115847 115847 7K6S 32588860 Crystal structure of the bromodomain (BD) of human Bromodomain and PHD finger-containing Transcription Factor (BPTF) bound to Compound 4 (SKT1174) 2020-09-21 2020-12-09 Ycas, P.D.,Zahid, H.,Chan, A.,Olson, N.M.,Johnson, J.A.,Talluri, S.K.,Schonbrunn, E.,Pomerantz, W.C.K. New inhibitors for the BPTF bromodomain enabled by structural biology and biophysical assay development. Org.Biomol.Chem. 2020 18 5174 5182 6V8J Crystal structure of Ara h 8.0201 2019-12-11 2020-12-16 Offermann, L.R.,Pote, S.,Hurlburt, B.K.,McBride, J.K.,Chruszcz, M. Crystal structure of Ara h 8.0201 To Be Published 0 0 0 0 6VCT 34809463 Mucor circinelloides FKBP12 protein bound with APX879 in C2221 space group 2019-12-23 2020-12-16 Gobeil, S.M.,Bobay, B.G.,Juvvadi, P.R.,Cole, D.C.,Heitman, J.,Steinbach, W.J.,Venters, R.A.,Spicer, L.D. Leveraging Fungal and Human Calcineurin-Inhibitor Structures, Biophysical Data, and Dynamics To Design Selective and Nonimmunosuppressive FK506 Analogs. Mbio 2021 12 0 0 6VCU 34809463 Homo sapiens FKBP12 protein bound with APX879 in P32 space group 2019-12-23 2020-12-16 Gobeil, S.M.,Bobay, B.G.,Juvvadi, P.R.,Cole, D.C.,Heitman, J.,Steinbach, W.J.,Venters, R.A.,Spicer, L.D. Leveraging Fungal and Human Calcineurin-Inhibitor Structures, Biophysical Data, and Dynamics To Design Selective and Nonimmunosuppressive FK506 Analogs. Mbio 2021 12 0 0 6VCV 34809463 Aspergillus fumigatus FKBP12 protein bound with APX879 in P1 space group 2019-12-23 2020-12-16 Gobeil, S.M.,Bobay, B.G.,Juvvadi, P.R.,Cole, D.C.,Heitman, J.,Steinbach, W.J.,Venters, R.A.,Spicer, L.D. Leveraging Fungal and Human Calcineurin-Inhibitor Structures, Biophysical Data, and Dynamics To Design Selective and Nonimmunosuppressive FK506 Analogs. Mbio 2021 12 0 0 7D5L 33226226 Discovery of BMS-986144, a Third Generation, Pan Genotype NS3/4A Protease Inhibitor for the Treatment of Hepatitis C Virus Infection 2020-09-26 2020-12-16 Sun, L.Q.,Mull, E.,D'Andrea, S.,Zheng, B.,Hiebert, S.,Gillis, E.,Bowsher, M.,Kandhasamy, S.,Baratam, V.R.,Puttaswamy, S.,Pulicharla, N.,Vishwakrishnan, S.,Reddy, S.,Trivedi, R.,Sinha, S.,Sivaprasad, S.,Rao, A.,Desai, S.,Ghosh, K.,Anumula, R.,Kumar, A.,Rajamani, R.,Wang, Y.K.,Fang, H.,Mathur, A.,Rampulla, R.,Zvyaga, T.A.,Mosure, K.,Jenkins, S.,Falk, P.,Tagore, D.M.,Chen, C.,Rendunchintala, K.,Loy, J.,Meanwell, N.A.,McPhee, F.,Scola, P.M. Discovery of BMS-986144, a Third-Generation, Pan-Genotype NS3/4A Protease Inhibitor for the Treatment of Hepatitis C Virus Infection. J.Med.Chem. 2020 63 14740 14760 7K0W The crystal structure of the 2009/H1N1/California PA endonuclease (construct with truncated loop 51-72) in complex with Baloxavir acid 2020-09-06 2020-12-16 Kumar, G.,White, S.W. Crystal structure of the influenza virus PA endonuclease in complex with Baloxavir Acid To Be Published 0 0 0 0 6VD3 Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Mesoporphyrin IX and Substrate 4-bromophenol 2019-12-23 2020-12-23 McGuire, A.H.,Petit, A.R.,Kang, J.,Malewschik, T.,de Serrano, V.,Carey, L.M.,Ghiladi, R.A. Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme To Be Published 0 0 0 0 6VD4 Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Mesoporphyrin IX and Substrate 4-bromo-ortho-cresol 2019-12-23 2020-12-23 McGuire, A.H.,Petit, A.R.,Kang, J.,Malewschik, T.,de Serrano, V.,Carey, L.M.,Ghiladi, R.A. Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme To Be Published 0 0 0 0 6VD5 Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Mesoporphyrin IX and Substrate Trichlorophenol 2019-12-23 2020-12-23 McGuire, A.H.,Petit, A.R.,Kang, J.,Malewschik, T.,de Serrano, V.,Carey, L.M.,Ghiladi, R.A. Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme To Be Published 0 0 0 0 6VD6 Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Mesoporphyrin IX and Substrate 4-nitrophenol 2019-12-23 2020-12-23 McGuire, A.H.,Petit, A.R.,Kang, J.,Malewschik, T.,de Serrano, V.,Carey, L.M.,Ghiladi, R.A. Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme To Be Published 0 0 0 0 6WMC 33098858 Crystal structure of a soluble variant of full-length human APOBEC3G (pH 9.0) 2020-04-21 2020-12-23 Maiti, A.,Myint, W.,Delviks-Frankenberry, K.A.,Hou, S.,Kanai, T.,Balachandran, V.,Sierra Rodriguez, C.,Tripathi, R.,Kurt Yilmaz, N.,Pathak, V.K.,Schiffer, C.A.,Matsuo, H. Crystal Structure of a Soluble APOBEC3G Variant Suggests ssDNA to Bind in a Channel that Extends between the Two Domains. J.Mol.Biol. 2020 432 6042 6060 6VDR Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Deuteroporphyrin IX and Substrate 4-bromophenol 2019-12-27 2020-12-30 McGuire, A.H.,Petit, A.R.,Kang, J.,Malewschik, T.,de Serrano, V.,Carey, L.M.,Ghiladi, R.A. Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme To Be Published 0 0 0 0 6VDS Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Deuteroporphyrin IX and Substrate 4-bromo-ortho-cresol 2019-12-27 2020-12-30 McGuire, A.H.,Petit, A.R.,Kang, J.,Malewschik, T.,de Serrano, V.,Carey, L.M.,Ghiladi, R.A. Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme To Be Published 0 0 0 0 6VDT Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Deuteroporphyrin IX and Substrate 4-nitrophenol 2019-12-27 2020-12-30 McGuire, A.H.,Petit, A.R.,Kang, J.,Malewschik, T.,de Serrano, V.,Carey, L.M.,Ghiladi, R.A. Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme To Be Published 0 0 0 0 6VDU Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Deuteroporphyrin IX and Substrate Trichlorophenol 2019-12-27 2020-12-30 McGuire, A.H.,Petit, A.R.,Kang, J.,Malewschik, T.,de Serrano, V.,Carey, L.M.,Ghiladi, R.A. Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme To Be Published 0 0 0 0 6VDV Crystal Structure of Dehaloperoxidase B in Complex with cofactor Manganese(III)- Porphyrin and Substrate 4-bromophenol 2019-12-27 2020-12-30 McGuire, A.H.,Petit, A.R.,Kang, J.,Malewschik, T.,de Serrano, V.,Carey, L.M.,Ghiladi, R.A. Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme To Be Published 0 0 0 0 6VDW Crystal Structure of Dehaloperoxidase B in Complex with cofactor Manganese(III) Porphyrin and Substrate 4-nitrophenol 2019-12-27 2020-12-30 McGuire, A.H.,Petit, A.R.,Kang, J.,Malewschik, T.,de Serrano, V.,Carey, L.M.,Ghiladi, R.A. Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme To Be Published 0 0 0 0 6VDX Crystal Structure of Dehaloperoxidase B in Complex with cofactor Manganese(III)- Porphyrin and Substrate Trichlorophenol 2019-12-27 2020-12-30 McGuire, A.H.,Petit, A.R.,Kang, J.,Malewschik, T.,de Serrano, V.,Carey, L.M.,Ghiladi, R.A. Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme To Be Published 0 0 0 0 6VDY Crystal Structure of Dehaloperoxidase B wild type in Complex with Substrate Trichlorophenol 2019-12-27 2020-12-30 McGuire, A.H.,Petit, A.R.,Kang, J.,Malewschik, T.,de Serrano, V.,Carey, L.M.,Ghiladi, R.A. Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme To Be Published 0 0 0 0 6XRJ 34019795 Crystal structure of the disulfide linked DH717.1 Fab dimer, derived from a macaque HIV-1 vaccine-induced Env glycan-reactive neutralizing antibody B cell lineage 2020-07-13 2020-12-30 Williams, W.B.,Meyerhoff, R.R.,Edwards, R.J.,Li, H.,Manne, K.,Nicely, N.I.,Henderson, R.,Zhou, Y.,Janowska, K.,Mansouri, K.,Gobeil, S.,Evangelous, T.,Hora, B.,Berry, M.,Abuahmad, A.Y.,Sprenz, J.,Deyton, M.,Stalls, V.,Kopp, M.,Hsu, A.L.,Borgnia, M.J.,Stewart-Jones, G.B.E.,Lee, M.S.,Bronkema, N.,Moody, M.A.,Wiehe, K.,Bradley, T.,Alam, S.M.,Parks, R.J.,Foulger, A.,Oguin, T.,Sempowski, G.D.,Bonsignori, M.,LaBranche, C.C.,Montefiori, D.C.,Seaman, M.,Santra, S.,Perfect, J.,Francica, J.R.,Lynn, G.M.,Aussedat, B.,Walkowicz, W.E.,Laga, R.,Kelsoe, G.,Saunders, K.O.,Fera, D.,Kwong, P.D.,Seder, R.A.,Bartesaghi, A.,Shaw, G.M.,Acharya, P.,Haynes, B.F. Fab-dimerized glycan-reactive antibodies are a structural category of natural antibodies. Cell 2021 184 2955 0 6VGL 33570945 JAK2 JH1 in complex with ruxolitinib 2020-01-08 2021-01-13 Davis, R.R.,Li, B.,Yun, S.Y.,Chan, A.,Nareddy, P.,Gunawan, S.,Ayaz, M.,Lawrence, H.R.,Reuther, G.W.,Lawrence, N.J.,Schonbrunn, E. Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof. J.Med.Chem. 2021 64 2228 2241 7JL7 33448281 Zebrafish Caspase N213T 2020-07-29 2021-01-27 Yao, L.,Swartz, P.,Hamilton, P.T.,Clark, A.C. Remodeling hydrogen bond interactions results in relaxed specificity of Caspase-3. Biosci.Rep. 2021 41 0 0 7KAF 33469660 The crystal structure of the 2009/H1N1/California PA endonuclease I38T (construct with truncated loop 51-72) in complex with baloxavir acid 2020-09-30 2021-02-03 Kumar, G.,Cuypers, M.,Webby, R.R.,Webb, T.R.,White, S.W. Structural insights into the substrate specificity of the endonuclease activity of the influenza virus cap-snatching mechanism. Nucleic Acids Res. 2021 49 1609 1618 7KBC 33469660 The crystal structure of the 2009/H1N1/California PA endonuclease mutant E119D (construct with truncated loop 51-72) in complex with baloxavir acid 2020-10-02 2021-02-03 Kumar, G.,Cuypers, M.,Webby, R.R.,Webb, T.R.,White, S.W. Structural insights into the substrate specificity of the endonuclease activity of the influenza virus cap-snatching mechanism. Nucleic Acids Res. 2021 49 1609 1618 7KL3 33469660 The crystal structure of the 2009/H1N1/California PA endonuclease mutant E119D bound to RNA oligomer AG*CAUC (*uncleaveable bond, -UC disordered) 2020-10-28 2021-02-03 Kumar, G.,Cuypers, M.,Webby, R.R.,Webb, T.R.,White, S.W. Structural insights into the substrate specificity of the endonuclease activity of the influenza virus cap-snatching mechanism. Nucleic Acids Res. 2021 49 1609 1618 6VS3 33570945 JAK2 JH1 in complex with BL2-057 2020-02-10 2021-02-17 Davis, R.R.,Li, B.,Yun, S.Y.,Chan, A.,Nareddy, P.,Gunawan, S.,Ayaz, M.,Lawrence, H.R.,Reuther, G.W.,Lawrence, N.J.,Schonbrunn, E. Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof. J.Med.Chem. 2021 64 2228 2241 6VSN 33570945 JAK2 JH1 in complex with BL2-110 2020-02-11 2021-02-17 Davis, R.R.,Li, B.,Yun, S.Y.,Chan, A.,Nareddy, P.,Gunawan, S.,Ayaz, M.,Lawrence, H.R.,Reuther, G.W.,Lawrence, N.J.,Schonbrunn, E. Structural Insights into JAK2 Inhibition by Ruxolitinib, Fedratinib, and Derivatives Thereof. J.Med.Chem. 2021 64 2228 2241 6WO8 33475202 Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 5-diphosphoinositol 1,3,4,6-tetrakisphosphate (5-PP-IP4), Mg, and Fluoride ion 2020-04-24 2021-03-03 Zong, G.,Jork, N.,Hostachy, S.,Fiedler, D.,Jessen, H.J.,Shears, S.B.,Wang, H. New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1. Faseb J. 2021 35 0 0 6WOA 33475202 Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 2-Diphosphoinositol pentakisphosphate (2-IP7), Mg, and Fluoride ion 2020-04-24 2021-03-03 Zong, G.,Jork, N.,Hostachy, S.,Fiedler, D.,Jessen, H.J.,Shears, S.B.,Wang, H. New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1. Faseb J. 2021 35 0 0 6WOG 33475202 Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 5-methylenebisphosphonate inositol pentakisphosphate (5-PCP-IP5) 2020-04-24 2021-03-03 Zong, G.,Jork, N.,Hostachy, S.,Fiedler, D.,Jessen, H.J.,Shears, S.B.,Wang, H. New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1. Faseb J. 2021 35 0 0 6XBB 33784308 Crystal structure of Streptomyces sviceus SsDesB in complex with NADP+ 2020-06-05 2021-03-17 Giddings, L.A.,Lountos, G.T.,Kim, K.W.,Brockley, M.,Needle, D.,Cherry, S.,Tropea, J.E.,Waugh, D.S. Characterization of a broadly specific cadaverine N-hydroxylase involved in desferrioxamine B biosynthesis in Streptomyces sviceus. Plos One 2021 16 0 0 6X39 35622884 Crystal structure of the FN5 domain of Mouse Lar 2020-05-21 2021-05-26 Kawakami, J.,Brooks, D.,Zalmai, R.,Hartson, S.D.,Bouyain, S.,Geisbrecht, E.R. Complex protein interactions mediate Drosophila Lar function in muscle tissue. Plos One 2022 17 0 0 6X3A 35622884 Crystal structure of the FN4-FN6 domains of human PTPRD 2020-05-21 2021-05-26 Kawakami, J.,Brooks, D.,Zalmai, R.,Hartson, S.D.,Bouyain, S.,Geisbrecht, E.R. Complex protein interactions mediate Drosophila Lar function in muscle tissue. Plos One 2022 17 0 0 7KCG Salivary protein from Culex quiquefasciatus that belongs to the Cysteine and Tryptophan-Rich (CWRC) family 2020-10-05 2021-06-02 Kern, O.,Valenzuela Leon, P.C.,Gittis, A.G.,Bonilla, B.,Cruz, P.,Chagas, A.C.,Ganesan, S.,Ribeiro, J.M.,Garboczi, D.N.,Martin-Martin, I.,Calvo, E. The structures of two salivary proteins from the West Nile vector Culex quinquefasciatus reveal a beta-trefoil fold with putative sugar binding properties Curr Res Struct Biol 2021 3 95 105 7M7L 34088846 Human DNA Pol eta with dA-ended primer and dAMPNPP 2021-03-28 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M7M 34088846 Human DNA Pol eta with rA-ended primer and dAMPNPP 2021-03-28 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M7N 34088846 Human DNA Pol eta with 2'-FA-ended primer and dAMPNPP 2021-03-28 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M7O 34088846 Human DNA Pol eta with dT-ended primer and 0.1 mM dAMPNPP 2021-03-28 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M7P 34088846 Human DNA Pol eta S113A with dA-ended primer and dAMPNPP 2021-03-28 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M7Q 34088846 Human DNA Pol eta S113A with dT-ended primer and dAMPNPP 2021-03-28 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M7R 34088846 Human DNA Pol eta S113A with rA-ended primer and dAMPNPP 2021-03-28 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M7S 34088846 Human DNA Pol eta S113A with dT-ended primer and 0.1 mM dAMPNPP 2021-03-28 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M7T 34088846 Human DNA Pol eta S113A with dT-ended primer and dATP: in crystallo reaction for 0 s 2021-03-28 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M7U 34088846 Human DNA Pol eta S113A with dT-ended primer and dATP: in crystallo reaction for 480s 2021-03-28 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M7Y 34088846 Human DNA Pol eta with dA-ended primer and dATP: in crystallo reaction for 0 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M7Z 34088846 Human DNA Pol eta with dA-ended primer and dATP: in crystallo reaction for 40 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M80 34088846 Human DNA Pol eta with dA-ended primer and dATP: in crystallo reaction for 100 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M81 34088846 Human DNA Pol eta with dA-ended primer and dATP: in crystallo reaction for 100 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M82 34088846 Human DNA Pol eta with dA-ended primer and dATP: in crystallo reaction for 300 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M83 34088846 Human DNA Pol eta S113A with dA-ended primer and dATP: in crystallo reaction for 0 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M84 34088846 Human DNA Pol eta S113A with dA-ended primer and dATP: in crystallo reaction for 40 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M85 34088846 Human DNA Pol eta S113A with dA-ended primer and dATP: in crystallo reaction for 80 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M86 34088846 Human DNA Pol eta S113A with dA-ended primer and dATP: in crystallo reaction for 140 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M87 34088846 Human DNA Pol eta S113A with dA-ended primer and dATP: in crystallo reaction for 230 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M88 34088846 Human DNA Pol eta S113A with dA-ended primer and dATP: in crystallo reaction for 300 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M89 34088846 Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 0 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M8A 34088846 Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 40 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M8B 34088846 Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 140 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M8C 34088846 Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 230 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7M8D 34088846 Human DNA Pol eta S113A with rA-ended primer and dATP: in crystallo reaction for 300 s 2021-03-29 2021-06-02 Gregory, M.T.,Gao, Y.,Cui, Q.,Yang, W. Multiple deprotonation paths of the nucleophile 3'-OH in the DNA synthesis reaction. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7JLS 34894561 RV3666c bound to tripeptide 2020-07-30 2021-06-09 Fernando, D.M.,Gee, C.T.,Griffith, E.C.,Meyer, C.J.,Wilt, L.A.,Tangallapally, R.,Wallace, M.J.,Miller, D.J.,Lee, R.E. Biophysical analysis of the Mycobacteria tuberculosis peptide binding protein DppA reveals a stringent peptide binding pocket. Tuberculosis (Edinb) 2021 132 102157 102157 7KYS 33452718 Crystal structure of human BCCIP beta (Native2) 2020-12-08 2021-06-09 Choi, W.S.,Liu, B.,Shen, Z.,Yang, W. Structure of human BCCIP and implications for binding and modification of partner proteins. Protein Sci. 2021 30 693 699 7L73 34710325 Crystal structure of the first bromodomain (BD1) of human BRDT bound to ERK5-IN-1 2020-12-25 2021-06-30 Karim, R.M.,Bikowitz, M.J.,Chan, A.,Zhu, J.Y.,Grassie, D.,Becker, A.,Berndt, N.,Gunawan, S.,Lawrence, N.J.,Schonbrunn, E. Differential BET Bromodomain Inhibition by Dihydropteridinone and Pyrimidodiazepinone Kinase Inhibitors. J.Med.Chem. 2021 64 15772 15786 7LB0 Crystal structure of the tandem bromodomain (BD1, BD2) of human TAF1 bound to ZS1-295 2021-01-07 2021-07-14 Karim, M.R.,Schonbrunn, E. Crystal structure of the tandem bromodomain (BD1, BD2) of human TAF1 bound to ZS1-295 To Be Published 0 0 0 0 7LEJ 34710325 Crystal structure of the second bromodomain (BD2) of human BRDT bound to Volasertib 2021-01-14 2021-07-14 Karim, R.M.,Bikowitz, M.J.,Chan, A.,Zhu, J.Y.,Grassie, D.,Becker, A.,Berndt, N.,Gunawan, S.,Lawrence, N.J.,Schonbrunn, E. Differential BET Bromodomain Inhibition by Dihydropteridinone and Pyrimidodiazepinone Kinase Inhibitors. J.Med.Chem. 2021 64 15772 15786 7LEL 34710325 Crystal structure of the second bromodomain (BD2) of human BRDT bound to Bromosporine 2021-01-14 2021-07-14 Karim, R.M.,Bikowitz, M.J.,Chan, A.,Zhu, J.Y.,Grassie, D.,Becker, A.,Berndt, N.,Gunawan, S.,Lawrence, N.J.,Schonbrunn, E. Differential BET Bromodomain Inhibition by Dihydropteridinone and Pyrimidodiazepinone Kinase Inhibitors. J.Med.Chem. 2021 64 15772 15786 6XQZ 34529975 Crystal structure of the catalytic domain of PBP2 S310A from Neisseria gonorrhoeae at pH 7.5 2020-07-10 2021-07-21 Fenton, B.A.,Tomberg, J.,Sciandra, C.A.,Nicholas, R.A.,Davies, C.,Zhou, P. Mutations in PBP2 from ceftriaxone-resistant Neisseria gonorrhoeae alter the dynamics of the beta 3-beta 4 loop to favor a low-affinity drug-binding state. J.Biol.Chem. 2021 297 101188 101188 7JJG 35191694 Crystal structure of the second bromodomain (BD2) of human TAF1 bound to ATR kinase inhibitor AZ20 2020-07-25 2021-07-28 Karim, R.M.,Yang, L.,Chen, L.,Bikowitz, M.J.,Lu, J.,Grassie, D.,Shultz, Z.P.,Lopchuk, J.M.,Chen, J.,Schonbrunn, E. Discovery of Dual TAF1-ATR Inhibitors and Ligand-Induced Structural Changes of the TAF1 Tandem Bromodomain. J.Med.Chem. 2022 65 4182 4200 6XES 34378386 Tubulin-RB3_SLD in complex with compound 40a 2020-06-13 2021-08-25 Chen, H.,Deng, S.,Albadari, N.,Yun, M.K.,Zhang, S.,Li, Y.,Ma, D.,Parke, D.N.,Yang, L.,Seagroves, T.N.,White, S.W.,Miller, D.D.,Li, W. Design, Synthesis, and Biological Evaluation of Stable Colchicine-Binding Site Tubulin Inhibitors 6-Aryl-2-benzoyl-pyridines as Potential Anticancer Agents. J.Med.Chem. 2021 64 12049 12074 6XET 34378386 Tubulin-RB3_SLD in complex with compound 60c 2020-06-13 2021-08-25 Chen, H.,Deng, S.,Albadari, N.,Yun, M.K.,Zhang, S.,Li, Y.,Ma, D.,Parke, D.N.,Yang, L.,Seagroves, T.N.,White, S.W.,Miller, D.D.,Li, W. Design, Synthesis, and Biological Evaluation of Stable Colchicine-Binding Site Tubulin Inhibitors 6-Aryl-2-benzoyl-pyridines as Potential Anticancer Agents. J.Med.Chem. 2021 64 12049 12074 7M63 34292726 Crystal structure of the indoleamine 2,3-dioxygenagse 1 (IDO1) complexed with IACS-70099 2021-03-25 2021-09-01 Hamilton, M.M.,Mseeh, F.,McAfoos, T.J.,Leonard, P.G.,Reyna, N.J.,Harris, A.L.,Xu, A.,Han, M.,Soth, M.J.,Czako, B.,Theroff, J.P.,Mandal, P.K.,Burke, J.P.,Virgin-Downey, B.,Petrocchi, A.,Pfaffinger, D.,Rogers, N.E.,Parker, C.A.,Yu, S.S.,Jiang, Y.,Krapp, S.,Lammens, A.,Trevitt, G.,Tremblay, M.R.,Mikule, K.,Wilcoxen, K.,Cross, J.B.,Jones, P.,Marszalek, J.R.,Lewis, R.T. Discovery of IACS-9779 and IACS-70465 as Potent Inhibitors Targeting Indoleamine 2,3-Dioxygenase 1 (IDO1) Apoenzyme. J.Med.Chem. 2021 64 11302 11329 7M7D 34292726 Crystal structure of the indoleamine 2,3-dioxygenagse 1 (IDO1) complexed with IACS-8968 2021-03-27 2021-09-01 Hamilton, M.M.,Mseeh, F.,McAfoos, T.J.,Leonard, P.G.,Reyna, N.J.,Harris, A.L.,Xu, A.,Han, M.,Soth, M.J.,Czako, B.,Theroff, J.P.,Mandal, P.K.,Burke, J.P.,Virgin-Downey, B.,Petrocchi, A.,Pfaffinger, D.,Rogers, N.E.,Parker, C.A.,Yu, S.S.,Jiang, Y.,Krapp, S.,Lammens, A.,Trevitt, G.,Tremblay, M.R.,Mikule, K.,Wilcoxen, K.,Cross, J.B.,Jones, P.,Marszalek, J.R.,Lewis, R.T. Discovery of IACS-9779 and IACS-70465 as Potent Inhibitors Targeting Indoleamine 2,3-Dioxygenase 1 (IDO1) Apoenzyme. J.Med.Chem. 2021 64 11302 11329 7K0U 35191694 Crystal structure of the second bromodomain (BD2) of human TAF1 bound to PLK1 kinase inhibitor BI2536 2020-09-06 2021-09-22 Karim, R.M.,Yang, L.,Chen, L.,Bikowitz, M.J.,Lu, J.,Grassie, D.,Shultz, Z.P.,Lopchuk, J.M.,Chen, J.,Schonbrunn, E. Discovery of Dual TAF1-ATR Inhibitors and Ligand-Induced Structural Changes of the TAF1 Tandem Bromodomain. J.Med.Chem. 2022 65 4182 4200 7K77 The crystal structure of the 2009 H1N1 PA endonuclease mutant I38T in complex with SJ001008025 2020-09-22 2021-09-22 Cuypers, M.G.,Slavish, P.J.,Rankovic, Z.,White, S.W. The crystal structure of the 2009 H1N1 PA endonuclease mutant I38T in complex with SJ001008025 To Be Published 0 0 0 0 7LGA 34357660 PEG10 CA-like C-terminal domain 2021-01-19 2021-10-06 Zurowska, K.,Alam, A.,Ganser-Pornillos, B.K.,Pornillos, O. Structural evidence that MOAP1 and PEG10 are derived from retrovirus/retrotransposon Gag proteins. Proteins 2022 90 309 313 7ML8 The crystal structure of I38T mutant PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ001023038 2021-04-27 2021-10-27 Cuypers, M.G.,Slavish, P.J.,Yun, M.K.,Dubois, R.,Rankovic, Z.,White, S.W. The crystal structure of I38T mutant PA endonuclease (2009/H1N1/CALIFORNIA) in complex with St Jude compound AC067-19 To Be Published 0 0 0 0 7R7D 34643390 Structure of human SHP2 in complex with compound 22 2021-06-24 2021-10-27 Czako, B.,Sun, Y.,McAfoos, T.,Cross, J.B.,Leonard, P.G.,Burke, J.P.,Carroll, C.L.,Feng, N.,Harris, A.L.,Jiang, Y.,Kang, Z.,Kovacs, J.J.,Mandal, P.,Meyers, B.A.,Mseeh, F.,Parker, C.A.,Yu, S.S.,Williams, C.C.,Wu, Q.,Di Francesco, M.E.,Draetta, G.,Heffernan, T.,Marszalek, J.R.,Kohl, N.E.,Jones, P. Discovery of 6-[(3 S ,4 S )-4-Amino-3-methyl-2-oxa-8-azaspiro[4.5]decan-8-yl]-3-(2,3-dichlorophenyl)-2-methyl-3,4-dihydropyrimidin-4-one (IACS-15414), a Potent and Orally Bioavailable SHP2 Inhibitor. J.Med.Chem. 2021 64 15141 15169 7R7L 34643390 Structure of human SHP2 in complex with compound 30 2021-06-24 2021-10-27 Czako, B.,Sun, Y.,McAfoos, T.,Cross, J.B.,Leonard, P.G.,Burke, J.P.,Carroll, C.L.,Feng, N.,Harris, A.L.,Jiang, Y.,Kang, Z.,Kovacs, J.J.,Mandal, P.,Meyers, B.A.,Mseeh, F.,Parker, C.A.,Yu, S.S.,Williams, C.C.,Wu, Q.,Di Francesco, M.E.,Draetta, G.,Heffernan, T.,Marszalek, J.R.,Kohl, N.E.,Jones, P. Discovery of 6-[(3 S ,4 S )-4-Amino-3-methyl-2-oxa-8-azaspiro[4.5]decan-8-yl]-3-(2,3-dichlorophenyl)-2-methyl-3,4-dihydropyrimidin-4-one (IACS-15414), a Potent and Orally Bioavailable SHP2 Inhibitor. J.Med.Chem. 2021 64 15141 15169 7KM4 Crystal Structure of Oxidized Version of Redox-Sensitive Superfolder Green Fluorescent Protein 2020-11-02 2021-11-10 Nguyen, T.,Nicely, N.I.,McCafferty, D.G. Crystal Structure of Oxidized Version of Redox-Sensitive Superfolder Green Fluorescent Protein To be Published 0 0 0 0 7S0V 34704263 The role of an Asp-Asp pair in the structure, function and inhibition of CTX-M Class A Beta-lactamase 2021-08-31 2021-11-10 Kemp, M.T.,Nichols, D.A.,Zhang, X.,Defrees, K.,Na, I.,Renslo, A.R.,Chen, Y. Mutation of the conserved Asp-Asp pair impairs the structure, function, and inhibition of CTX-M Class A beta-lactamase. Febs Lett. 2021 595 2981 2994 6WWB 34614283 Crystal Structure of the second bromodomain of human BRD2 in complex with the compound 3b 2020-05-08 2021-11-17 Min, J.,Mayasundari, A.,Keramatnia, F.,Jonchere, B.,Yang, S.W.,Jarusiewicz, J.,Actis, M.,Das, S.,Young, B.,Slavish, J.,Yang, L.,Li, Y.,Fu, X.,Garrett, S.H.,Yun, M.K.,Li, Z.,Nithianantham, S.,Chai, S.,Chen, T.,Shelat, A.,Lee, R.E.,Nishiguchi, G.,White, S.W.,Roussel, M.F.,Potts, P.R.,Fischer, M.,Rankovic, Z. Phenyl-Glutarimides: Alternative Cereblon Binders for the Design of PROTACs. Angew.Chem.Int.Ed.Engl. 2021 60 26663 26670 6X4J 34814071 PANK3 complex structure with compound PZ-2863 2020-05-22 2021-11-24 Sharma, L.K.,Yun, M.K.,Subramanian, C.,Tangallapally, R.,Jackowski, S.,Rock, C.O.,White, S.W.,Lee, R.E. LipE guided discovery of isopropylphenyl pyridazines as pantothenate kinase modulators. Bioorg.Med.Chem. 2021 52 116504 116504 6X4K 34814071 PANK3 complex structure with compound PZ-2890 2020-05-22 2021-11-24 Sharma, L.K.,Yun, M.K.,Subramanian, C.,Tangallapally, R.,Jackowski, S.,Rock, C.O.,White, S.W.,Lee, R.E. LipE guided discovery of isopropylphenyl pyridazines as pantothenate kinase modulators. Bioorg.Med.Chem. 2021 52 116504 116504 7MNH V59W mutant of Dehaloperoxidase A from Amphitrite ornata treated with Fluoride 2021-04-30 2021-11-24 Thompson, M.K.,Shay, M.R.,Dumarieh, R.,Ghiladi, R.A.,Franzen, S. A new inhibition mechanism in the multifunctional catalytic hemoglobin dehaloperoxidase as revealed by the DHP A(V59W) mutant: A spectroscopic and crystallographic study J Porphyr Phthalocyanines 2021 25 756 771 7KSW 33824325 DNA Polymerase Mu, dGTP:Ct Reaction State Ternary Complex, 10 mM Mg2+ (10min) 2020-11-24 2021-12-01 Jamsen, J.A.,Sassa, A.,Shock, D.D.,Beard, W.A.,Wilson, S.H. Watching a double strand break repair polymerase insert a pro-mutagenic oxidized nucleotide. Nat Commun 2021 12 2059 2059 7KTA 33824325 DNA Polymerase Mu, 8-oxodGTP:Ct Pre-Catalytic Ground State Ternary Complex, 20 mM Ca2+ (120min) 2020-11-24 2021-12-15 Jamsen, J.A.,Sassa, A.,Shock, D.D.,Beard, W.A.,Wilson, S.H. Watching a double strand break repair polymerase insert a pro-mutagenic oxidized nucleotide. Nat Commun 2021 12 2059 2059 7MRN 34958801 Mouse CNTN5 APP complex 2021-05-07 2022-01-05 Karuppan, S.J.,Vogt, A.,Fischer, Z.,Ladutska, A.,Swiastyn, J.,McGraw, H.F.,Bouyain, S. Members of the vertebrate contactin and amyloid precursor protein families interact through a conserved interface. J.Biol.Chem. 2021 298 101541 101541 7MRQ 34958801 Chicken CNTN4 FN1-FN3 domains with T751A, V752A, Y781A, E786A mutations 2021-05-08 2022-01-05 Karuppan, S.J.,Vogt, A.,Fischer, Z.,Ladutska, A.,Swiastyn, J.,McGraw, H.F.,Bouyain, S. Members of the vertebrate contactin and amyloid precursor protein families interact through a conserved interface. J.Biol.Chem. 2021 298 101541 101541 7KSU 33824325 DNA Polymerase Mu, dGTP:Ct Product State Ternary Complex, 10 mM Mn2+ (4min) 2020-11-24 2022-01-19 Jamsen, J.A.,Sassa, A.,Shock, D.D.,Beard, W.A.,Wilson, S.H. Watching a double strand break repair polymerase insert a pro-mutagenic oxidized nucleotide. Nat Commun 2021 12 2059 2059 7TGQ 35130321 Zinc finger antiviral protein (ZAP) central domain bound to ADP-ribose 2022-01-09 2022-02-02 Xue, G.,Braczyk, K.,Goncalves-Carneiro, D.,Dawidziak, D.M.,Sanchez, K.,Ong, H.,Wan, Y.,Zadrozny, K.K.,Ganser-Pornillos, B.K.,Bieniasz, P.D.,Pornillos, O. Poly(ADP-ribose) potentiates ZAP antiviral activity. Plos Pathog. 2022 18 0 0 7LP7 The crystal structure of the wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000983476 2021-02-11 2022-02-16 Cuypers, M.G.,Slavish, P.J.,Rankovic, Z.,White, S.W. The crystal structure of the wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000983476 To Be Published 0 0 0 0 7LSD Crystal structure of near-infrared fluorescent protein miRFP718nano 2021-02-18 2022-02-23 Oliinyk, O.S.,Pletnev, S.,Ma, C.,Baloban, M.,Toboada, C.,Sheng, H.,Yao, J.,Verkhusha, V.V. Rational design of a small near-infrared fluorescent protein from CBCR suitable for deep-tissue SWIR imaging. To Be Published 0 0 0 0 7MOD 35468885 Crystal Structure of Arabidopsis thaliana Plant and Fungi Atypical Dual Specificity Phosphatase 1(AtPFA-DSP1 ) Cys150Ser in Complex with Phosphate in Conformation A (Pi(A)) 2021-05-01 2022-03-02 Wang, H.,Perera, L.,Jork, N.,Zong, G.,Riley, A.M.,Potter, B.V.L.,Jessen, H.J.,Shears, S.B. A structural expose of noncanonical molecular reactivity within the protein tyrosine phosphatase WPD loop. Nat Commun 2022 13 2231 2231 7MOE 35468885 Crystal Structure of Arabidopsis thaliana Plant and Fungi Atypical Dual Specificity Phosphatase 1(AtPFA-DSP1)Cys150Ser in complex with 5-diphosphoinositol 1,2,3,4,6-pentakisphosphate (5-InsP7) 2021-05-01 2022-03-02 Wang, H.,Perera, L.,Jork, N.,Zong, G.,Riley, A.M.,Potter, B.V.L.,Jessen, H.J.,Shears, S.B. A structural expose of noncanonical molecular reactivity within the protein tyrosine phosphatase WPD loop. Nat Commun 2022 13 2231 2231 7TO6 35170223 HIV-1 wild type protease with GRL-01717A, with C-4 substituted cyclohexane-fused bis-tetrahydrofuran (Chf-THF) derivatives as P2-ligand [diastereomer 2] 2022-01-23 2022-03-02 Ghosh, A.K.,Kovela, S.,Sharma, A.,Shahabi, D.,Ghosh, A.K.,Hopkins, D.R.,Yadav, M.,Johnson, M.E.,Agniswamy, J.,Wang, Y.F.,Hattori, S.I.,Higashi-Kuwata, N.,Aoki, M.,Amano, M.,Weber, I.T.,Mitsuya, H. Design, Synthesis and X-Ray Structural Studies of Potent HIV-1 Protease Inhibitors Containing C-4 Substituted Tricyclic Hexahydro-Furofuran Derivatives as P2 Ligands. Chemmedchem 2022 17 0 0 7LZN DHP B in complex with 2,4-Dichlorophenol substrate 2021-03-10 2022-03-16 Carey, L.M.,Ghiladi, R.A. Mechanistic and Structural Studies of 2,4-dihalophenol: Bridging the Functional Gap between Reactivity and Inhibition in Dehaloperoxidase To Be Published 0 0 0 0 7LZO DHP B in complex with 2,4-Dibromophenol substrate 2021-03-10 2022-03-16 Carey, L.M.,Ghiladi, R.A. Mechanistic and Structural Studies of 2,4-dihalophenol: Bridging the Functional Gap between Reactivity and Inhibition in Dehaloperoxidase To Be Published 0 0 0 0 7KQN 34969861 Ternary complex of TERT (telomerase reverse transcriptase) with RNA template, DNA primer, an incoming dGTP and a downstream hybrid duplex 2020-11-17 2022-03-23 Choi, W.S.,Weng, P.J.,Yang, W. Flexibility of telomerase in binding the RNA template and DNA telomeric repeat. Proc.Natl.Acad.Sci.USA 2022 119 0 0 7OUO 35096964 Crystal structure of RNA duplex [UCGUGCGA]2 in complex with Ba2+ cation 2021-06-12 2022-03-30 Ruszkowska, A.,Zheng, Y.Y.,Mao, S.,Ruszkowski, M.,Sheng, J. Structural Insights Into the 5'UG/3'GU Wobble Tandem in Complex With Ba 2+ Cation. Front Mol Biosci 2021 8 762786 762786 7RI1 35413243 Crystal structure of anti-HIV llama VHH antibody J3 in complex with HIV-1 C1086 gp120 2021-07-19 2022-03-30 Zhou, T.,Chen, L.,Gorman, J.,Wang, S.,Kwon, Y.D.,Lin, B.C.,Louder, M.K.,Rawi, R.,Stancofski, E.D.,Yang, Y.,Zhang, B.,Quigley, A.F.,McCoy, L.E.,Rutten, L.,Verrips, T.,Weiss, R.A.,Doria-Rose, N.A.,Shapiro, L.,Kwong, P.D. Structural basis for llama nanobody recognition and neutralization of HIV-1 at the CD4-binding site. Structure 2022 30 862 0 7RI2 35413243 Crystal structure of anti-HIV llama VHH antibody A12 in complex with HIV-1 C1086 gp120 2021-07-19 2022-03-30 Zhou, T.,Chen, L.,Gorman, J.,Wang, S.,Kwon, Y.D.,Lin, B.C.,Louder, M.K.,Rawi, R.,Stancofski, E.D.,Yang, Y.,Zhang, B.,Quigley, A.F.,McCoy, L.E.,Rutten, L.,Verrips, T.,Weiss, R.A.,Doria-Rose, N.A.,Shapiro, L.,Kwong, P.D. Structural basis for llama nanobody recognition and neutralization of HIV-1 at the CD4-binding site. Structure 2022 30 862 0 7SF9 34936154 Branchiostoma Floridae Violet Fluorescent Protein 2021-10-03 2022-03-30 Roldan-Salgado, A.,Muslinkina, L.,Pletnev, S.,Pletneva, N.,Pletnev, V.,Gaytan, P. A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins. Protein Sci. 2022 31 688 700 7SFA 34936154 Branchiostoma floridae fluorescent protein LanFP10A2 2021-10-03 2022-03-30 Roldan-Salgado, A.,Muslinkina, L.,Pletnev, S.,Pletneva, N.,Pletnev, V.,Gaytan, P. A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins. Protein Sci. 2022 31 688 700 7N9G 34774565 Crystal structure of the Abl 1b Kinase domain in complex with Dasatinib and Imatinib 2021-06-17 2022-04-27 Xie, T.,Saleh, T.,Rossi, P.,Miller, D.,Kalodimos, C.G. Imatinib can act as an Allosteric Activator of Abl Kinase. J.Mol.Biol. 2022 434 167349 167349 7MPF 36603507 The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000986436 2021-05-04 2022-05-04 Slavish, P.J.,Cuypers, M.G.,Rimmer, M.A.,Abdolvahabi, A.,Jeevan, T.,Kumar, G.,Jarusiewicz, J.A.,Vaithiyalingam, S.,Jones, J.C.,Bowling, J.J.,Price, J.E.,DuBois, R.M.,Min, J.,Webby, R.J.,Rankovic, Z.,White, S.W. Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential. Eur.J.Med.Chem. 2023 247 115035 115035 7UJ7 35575456 Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with RU39411 2022-03-30 2022-05-04 Hosfield, D.J.,Weber, S.,Li, N.S.,Suavage, M.,Joiner, C.F.,Hancock, G.R.,Sullivan, E.A.,Ndukwe, E.,Han, R.,Cush, S.,Laine, M.,Mader, S.C.,Greene, G.L.,Fanning, S.W. Stereospecific lasofoxifene derivatives reveal the interplay between estrogen receptor alpha stability and antagonistic activity in ESR1 mutant breast cancer cells. Elife 2022 11 0 0 7UTC 35357038 Crystal structure of secondary alcohol dehydrogenases from the Thermoanaerobacter ethanolicus with NADP and transition-state analogue inhibitor DMSO 2022-04-26 2022-05-04 Dinh, T.,Rahn, K.T.,Phillips, R.S. Crystallographic snapshots of ternary complexes of thermophilic secondary alcohol dehydrogenase from Thermoanaerobacter pseudoethanolicus reveal the dynamics of ligand exchange and the proton relay network. Proteins 2022 90 1570 1583 7KSS 33824325 DNA Polymerase Mu, dGTP:Ct Pre-Catalytic Ground State Ternary Complex, 10 mM Ca2+ (20min) 2020-11-24 2022-05-11 Jamsen, J.A.,Sassa, A.,Shock, D.D.,Beard, W.A.,Wilson, S.H. Watching a double strand break repair polymerase insert a pro-mutagenic oxidized nucleotide. Nat Commun 2021 12 2059 2059 7KTB 33824325 DNA Polymerase Mu, 8-oxodGTP:Ct Reaction State Ternary Complex, 10 mM Mn2+ (40min) 2020-11-24 2022-05-11 Jamsen, J.A.,Sassa, A.,Shock, D.D.,Beard, W.A.,Wilson, S.H. Watching a double strand break repair polymerase insert a pro-mutagenic oxidized nucleotide. Nat Commun 2021 12 2059 2059 7MTY 36603507 The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988569 2021-05-13 2022-05-18 Slavish, P.J.,Cuypers, M.G.,Rimmer, M.A.,Abdolvahabi, A.,Jeevan, T.,Kumar, G.,Jarusiewicz, J.A.,Vaithiyalingam, S.,Jones, J.C.,Bowling, J.J.,Price, J.E.,DuBois, R.M.,Min, J.,Webby, R.J.,Rankovic, Z.,White, S.W. Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential. Eur.J.Med.Chem. 2023 247 115035 115035 7MX0 The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988558 2021-05-17 2022-05-18 Cuypers, M.G.,Slavish, J.P.,Rankovic, Z.,White, S.W. The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988558 To Be Published 0 0 0 0 7MY5 The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988503 2021-05-20 2022-05-25 Cuypers, M.G.,Slavish, J.P.,Rankovic, Z.,White, S.W. The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988503 To Be Published 0 0 0 0 7TVC 35568118 Short form D7 protein from Aedes aegypti 2022-02-04 2022-05-25 Alvarenga, P.H.,Dias, D.R.,Xu, X.,Francischetti, I.M.B.,Gittis, A.G.,Arp, G.,Garboczi, D.N.,Ribeiro, J.M.C.,Andersen, J.F. Functional aspects of evolution in a cluster of salivary protein genes from mosquitoes. Insect Biochem.Mol.Biol. 2022 146 103785 103785 7TE3 35865516 Crystal Structure of a Double Loop Deletion Mutant in gC1qR/C1qBP/HABP-1 2022-01-04 2022-06-01 Zhang, Y.,Vontz, A.J.,Kallenberger, E.M.,Xu, X.,Ploscariu, N.T.,Ramyar, K.X.,Garcia, B.L.,Ghebrehiwet, B.,Geisbrecht, B.V. gC1qR/C1qBP/HABP-1: Structural Analysis of the Trimeric Core Region, Interactions With a Novel Panel of Monoclonal Antibodies, and Their Influence on Binding to FXII. Front Immunol 2022 13 887742 887742 7N47 36603507 The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988514 2021-06-03 2022-06-08 Slavish, P.J.,Cuypers, M.G.,Rimmer, M.A.,Abdolvahabi, A.,Jeevan, T.,Kumar, G.,Jarusiewicz, J.A.,Vaithiyalingam, S.,Jones, J.C.,Bowling, J.J.,Price, J.E.,DuBois, R.M.,Min, J.,Webby, R.J.,Rankovic, Z.,White, S.W. Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential. Eur.J.Med.Chem. 2023 247 115035 115035 7N55 36603507 The crystal structure of the mutant I38T PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988514 2021-06-04 2022-06-08 Slavish, P.J.,Cuypers, M.G.,Rimmer, M.A.,Abdolvahabi, A.,Jeevan, T.,Kumar, G.,Jarusiewicz, J.A.,Vaithiyalingam, S.,Jones, J.C.,Bowling, J.J.,Price, J.E.,DuBois, R.M.,Min, J.,Webby, R.J.,Rankovic, Z.,White, S.W. Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential. Eur.J.Med.Chem. 2023 247 115035 115035 7TN5 35635723 Crystal structure of Zea mays Inositol-tetrakisphosphate Kinase 1 (ITPK1) 2022-01-20 2022-06-15 Zong, G.,Shears, S.B.,Wang, H. Structural and catalytic analyses of the InsP 6 kinase activities of higher plant ITPKs. Faseb J. 2022 36 0 0 7LH8 34932262 CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH INHIBITOR JJ-II-131 2021-01-21 2022-07-06 Jiang, J.,Sigua, L.H.,Chan, A.,Kalra, P.,Pomerantz, W.C.K.,Schonbrunn, E.,Qi, J.,Georg, G.I. Dihydropyridine Lactam Analogs Targeting BET Bromodomains. Chemmedchem 2022 17 0 0 7T5R 35653508 P. aeruginosa LpxA in complex with ligand H7 2021-12-13 2022-07-06 Sacco, M.D.,Defrees, K.,Zhang, X.,Lawless, W.,Nwanochie, E.,Balsizer, A.,Darch, S.E.,Renslo, A.R.,Chen, Y. Structure-Based Ligand Design Targeting Pseudomonas aeruginosa LpxA in Lipid A Biosynthesis. Acs Infect Dis. 2022 8 1231 1240 7T5X 35653508 P. aeruginosa LpxA in complex with ligand L6 2021-12-13 2022-07-06 Sacco, M.D.,Defrees, K.,Zhang, X.,Lawless, W.,Nwanochie, E.,Balsizer, A.,Darch, S.E.,Renslo, A.R.,Chen, Y. Structure-Based Ligand Design Targeting Pseudomonas aeruginosa LpxA in Lipid A Biosynthesis. Acs Infect Dis. 2022 8 1231 1240 8D4J 36119652 Crystal Structure of SARS-CoV-2 Main Protease (Mpro) H172Y Mutant 2022-06-02 2022-07-13 Hu, Y.,Lewandowski, E.M.,Tan, H.,Zhang, X.,Morgan, R.T.,Zhang, X.,Jacobs, L.M.C.,Butler, S.G.,Gongora, M.V.,Choy, J.,Deng, X.,Chen, Y.,Wang, J. Naturally occurring mutations of SARS-CoV-2 main protease confer drug resistance to nirmatrelvir. Biorxiv 2022 0 0 0 8D4N 36119652 Crystal Structure of SARS-CoV-2 Main Protease (Mpro) E166Q Mutant 2022-06-02 2022-07-13 Hu, Y.,Lewandowski, E.M.,Tan, H.,Zhang, X.,Morgan, R.T.,Zhang, X.,Jacobs, L.M.C.,Butler, S.G.,Gongora, M.V.,Choy, J.,Deng, X.,Chen, Y.,Wang, J. Naturally occurring mutations of SARS-CoV-2 main protease confer drug resistance to nirmatrelvir. Biorxiv 2022 0 0 0 8DGB 37637734 Crystal Structure of SARS-CoV-2 Main Protease (Mpro) Q192T Mutant in Complex with Inhibitor GC376 2022-06-23 2022-07-13 Hu, Y.,Lewandowski, E.M.,Tan, H.,Zhang, X.,Morgan, R.T.,Zhang, X.,Jacobs, L.M.C.,Butler, S.G.,Gongora, M.V.,Choy, J.,Deng, X.,Chen, Y.,Wang, J. Naturally Occurring Mutations of SARS-CoV-2 Main Protease Confer Drug Resistance to Nirmatrelvir. Acs Cent.Sci. 2023 9 1658 1669 7RKP 36603507 The crystal structure of I38T mutant PA endonuclease (2009/H1N1/CALIFORNIA) in complex with cyclic compound SJ001034733 2021-07-22 2022-07-27 Slavish, P.J.,Cuypers, M.G.,Rimmer, M.A.,Abdolvahabi, A.,Jeevan, T.,Kumar, G.,Jarusiewicz, J.A.,Vaithiyalingam, S.,Jones, J.C.,Bowling, J.J.,Price, J.E.,DuBois, R.M.,Min, J.,Webby, R.J.,Rankovic, Z.,White, S.W. Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential. Eur.J.Med.Chem. 2023 247 115035 115035 7LPK 34515477 Crystal structure of BPTF bromodomain in complex with inhibitor HZ-03-112 2021-02-12 2022-08-10 Zahid, H.,Buchholz, C.R.,Singh, M.,Ciccone, M.F.,Chan, A.,Nithianantham, S.,Shi, K.,Aihara, H.,Fischer, M.,Schonbrunn, E.,Dos Santos, C.O.,Landry, J.W.,Pomerantz, W.C.K. New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition. J.Med.Chem. 2021 64 13902 13917 7LRK 34515477 Crystal structure of BPTF bromodomain in complex with inhibitor Pdy-3-093 2021-02-16 2022-08-10 Zahid, H.,Buchholz, C.R.,Singh, M.,Ciccone, M.F.,Chan, A.,Nithianantham, S.,Shi, K.,Aihara, H.,Fischer, M.,Schonbrunn, E.,Dos Santos, C.O.,Landry, J.W.,Pomerantz, W.C.K. New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition. J.Med.Chem. 2021 64 13902 13917 7LRO 34515477 Crystal structure of BPTF bromodomain in complex with inhibitor HZ-01-105 2021-02-17 2022-08-10 Zahid, H.,Buchholz, C.R.,Singh, M.,Ciccone, M.F.,Chan, A.,Nithianantham, S.,Shi, K.,Aihara, H.,Fischer, M.,Schonbrunn, E.,Dos Santos, C.O.,Landry, J.W.,Pomerantz, W.C.K. New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition. J.Med.Chem. 2021 64 13902 13917 7TAB 35930799 G-925 bound to the SMARCA4 (BRG1) Bromodomain 2021-12-20 2022-08-17 Taylor, A.M.,Bailey, C.,Belmont, L.D.,Campbell, R.,Cantone, N.,Cote, A.,Crawford, T.D.,Cummings, R.,DeMent, K.,Duplessis, M.,Flynn, M.,Good, A.C.,Huang, H.R.,Joshi, S.,Leblanc, Y.,Murray, J.,Nasveschuk, C.G.,Neiss, A.,Poy, F.,Romero, F.A.,Sandy, P.,Tang, Y.,Tsui, V.,Zawadzke, L.,Sims 3rd, R.J.,Audia, J.E.,Bellon, S.F.,Magnuson, S.R.,Albrecht, B.K.,Cochran, A.G. GNE-064: A Potent, Selective, and Orally Bioavailable Chemical Probe for the Bromodomains of SMARCA2 and SMARCA4 and the Fifth Bromodomain of PBRM1. J.Med.Chem. 2022 65 11177 11186 7PZZ 35947902 Crystal structure of serine hydroxymethyltransferase, isoform 2 from Arabidopsis thaliana (SHM2) 2021-10-13 2022-08-24 Nogues, I.,Sekula, B.,Angelaccio, S.,Grzechowiak, M.,Tramonti, A.,Contestabile, R.,Ruszkowski, M. Arabidopsis thaliana serine hydroxymethyltransferases: functions, structures, and perspectives. Plant Physiol Biochem. 2022 187 37 49 7UTY 35941525 First bromodomain of BRD4 liganded with compound 2c 2022-04-28 2022-08-24 Jiang, J.,Zhao, P.L.,Sigua, L.H.,Chan, A.,Schonbrunn, E.,Qi, J.,Georg, G.I. 1,4-Dihydropyridinebutyrolactone-derived ring-opened ester and amide analogs targeting BET bromodomains. Arch Pharm 2022 355 0 0 7UUU 35941525 First bromodomain of BRDT liganded with compound 2c 2022-04-29 2022-08-24 Jiang, J.,Zhao, P.L.,Sigua, L.H.,Chan, A.,Schonbrunn, E.,Qi, J.,Georg, G.I. 1,4-Dihydropyridinebutyrolactone-derived ring-opened ester and amide analogs targeting BET bromodomains. Arch Pharm 2022 355 0 0 7M0H DHP B in complex with 4-chlorophenol ligand 2021-03-10 2022-08-31 Carey, L.M.,Ghiladi, R.A. Mechanistic and Structural Studies of 2,4-dihalophenol: Bridging the Functional Gap between Reactivity and Inhibition in Dehaloperoxidase To Be Published 0 0 0 0 7RMU Structure of Thermomonospora curvata heme-containing DyP-type peroxidase with a modified axial ligand 2021-07-28 2022-08-31 Khadka, S.,Geisbrecht, B.,Li, P. Structure of Thermomonospora curvata heme-containing DyP-type peroxidase with a modified axial ligand To Be Published 0 0 0 0 8DDI 37651467 Crystal Structure of SARS-CoV-2 Main Protease (Mpro) E166N Mutant 2022-06-18 2022-08-31 Ou, J.,Lewandowski, E.M.,Hu, Y.,Lipinski, A.A.,Aljasser, A.,Colon-Ascanio, M.,Morgan, R.T.,Jacobs, L.M.C.,Zhang, X.,Bikowitz, M.J.,Langlais, P.R.,Tan, H.,Wang, J.,Chen, Y.,Choy, J.S. A yeast-based system to study SARS-CoV-2 Mpro structure and to identify nirmatrelvir resistant mutations. Plos Pathog. 2023 19 0 0 8DDM 37651467 Crystal Structure of SARS-CoV-2 Main Protease (Mpro) E166R Mutant in Complex with Inhibitor GC376 2022-06-18 2022-08-31 Ou, J.,Lewandowski, E.M.,Hu, Y.,Lipinski, A.A.,Aljasser, A.,Colon-Ascanio, M.,Morgan, R.T.,Jacobs, L.M.C.,Zhang, X.,Bikowitz, M.J.,Langlais, P.R.,Tan, H.,Wang, J.,Chen, Y.,Choy, J.S. A yeast-based system to study SARS-CoV-2 Mpro structure and to identify nirmatrelvir resistant mutations. Plos Pathog. 2023 19 0 0 7M1Z Targeting Enterococcus faecalis HMG-CoA reductase with a novel non-statin inhibitor 2021-03-15 2022-09-21 Bose, S.,Steussy, C.N.,Lopez-Perez, D.,Schmidt, T.,Kulathunga, S.C.,Seleem, M.N.,Lipton, M.,Mesecar, A.D.,Rodwell, V.W.,Stauffacher, C.V. Targeting Enterococcus faecalis HMG-CoA reductase with a non-statin inhibitor Nat Commun 2023 0 0 0 7UMR 36603507 The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with compound SJ001034732-1 (trans-form) 2022-04-07 2022-10-12 Slavish, P.J.,Cuypers, M.G.,Rimmer, M.A.,Abdolvahabi, A.,Jeevan, T.,Kumar, G.,Jarusiewicz, J.A.,Vaithiyalingam, S.,Jones, J.C.,Bowling, J.J.,Price, J.E.,DuBois, R.M.,Min, J.,Webby, R.J.,Rankovic, Z.,White, S.W. Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential. Eur.J.Med.Chem. 2023 247 115035 115035 7UUH 36603507 The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with compound SJ001034732-2 (cis-form) 2022-04-28 2022-11-02 Slavish, P.J.,Cuypers, M.G.,Rimmer, M.A.,Abdolvahabi, A.,Jeevan, T.,Kumar, G.,Jarusiewicz, J.A.,Vaithiyalingam, S.,Jones, J.C.,Bowling, J.J.,Price, J.E.,DuBois, R.M.,Min, J.,Webby, R.J.,Rankovic, Z.,White, S.W. Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential. Eur.J.Med.Chem. 2023 247 115035 115035 8DOG 36272837 Dehaloperoxidase B in complex with Bisphenol E 2022-07-13 2022-11-02 Yun, D.,de Serrano, V.,Ghiladi, R.A. Oxidation of bisphenol A (BPA) and related compounds by the multifunctional catalytic globin dehaloperoxidase. J.Inorg.Biochem. 2023 238 112020 112020 8DOH 36272837 Dehaloperoxidase B in complex with Bisphenol F 2022-07-13 2022-11-02 Yun, D.,de Serrano, V.,Ghiladi, R.A. Oxidation of bisphenol A (BPA) and related compounds by the multifunctional catalytic globin dehaloperoxidase. J.Inorg.Biochem. 2023 238 112020 112020 8DOI 36272837 Dehaloperoxidase B in complex with 2,2'-Biphenol 2022-07-13 2022-11-02 Yun, D.,de Serrano, V.,Ghiladi, R.A. Oxidation of bisphenol A (BPA) and related compounds by the multifunctional catalytic globin dehaloperoxidase. J.Inorg.Biochem. 2023 238 112020 112020 7SSK 36302181 Human P300 complexed with a glycine-based inhibitor 2021-11-11 2022-11-09 Tian, X.,Suarez, D.,Thomson, D.,Li, W.,King, E.A.,LaFrance, L.,Boehm, J.,Barton, L.,Di Marco, C.,Martyr, C.,Thalji, R.,Medina, J.,Knight, S.,Heerding, D.,Gao, E.,Nartey, E.,Cecconie, T.,Nixon, C.,Zhang, G.,Berrodin, T.J.,Phelps, C.,Patel, A.,Bai, X.,Lind, K.,Prabhu, N.,Messer, J.,Zhu, Z.,Shewchuk, L.,Reid, R.,Graves, A.P.,McHugh, C.,Mangatt, B. Discovery of Proline-Based p300/CBP Inhibitors Using DNA-Encoded Library Technology in Combination with High-Throughput Screening. J.Med.Chem. 2022 65 14391 14408 7SZQ 36302181 Human P300 complexed with an azaindazole inhibitor 2021-11-29 2022-11-09 Tian, X.,Suarez, D.,Thomson, D.,Li, W.,King, E.A.,LaFrance, L.,Boehm, J.,Barton, L.,Di Marco, C.,Martyr, C.,Thalji, R.,Medina, J.,Knight, S.,Heerding, D.,Gao, E.,Nartey, E.,Cecconie, T.,Nixon, C.,Zhang, G.,Berrodin, T.J.,Phelps, C.,Patel, A.,Bai, X.,Lind, K.,Prabhu, N.,Messer, J.,Zhu, Z.,Shewchuk, L.,Reid, R.,Graves, A.P.,McHugh, C.,Mangatt, B. Discovery of Proline-Based p300/CBP Inhibitors Using DNA-Encoded Library Technology in Combination with High-Throughput Screening. J.Med.Chem. 2022 65 14391 14408 7T0A 36218371 Cryptococcus neoformans protein farnesyltransferase co-crystallized with FPP and inhibitor 2f 2021-11-29 2022-11-09 Wang, Y.,Xu, F.,Nichols, C.B.,Shi, Y.,Hellinga, H.W.,Alspaugh, J.A.,Distefano, M.D.,Beese, L.S. Structure-Guided Discovery of Potent Antifungals that Prevent Ras Signaling by Inhibiting Protein Farnesyltransferase. J.Med.Chem. 2022 65 13753 13770 7T0B 36218371 Cryptococcus neoformans protein farnesyltransferase in complex with FPP and inhibitor 2g 2021-11-29 2022-11-09 Wang, Y.,Xu, F.,Nichols, C.B.,Shi, Y.,Hellinga, H.W.,Alspaugh, J.A.,Distefano, M.D.,Beese, L.S. Structure-Guided Discovery of Potent Antifungals that Prevent Ras Signaling by Inhibiting Protein Farnesyltransferase. J.Med.Chem. 2022 65 13753 13770 7SJB Crystal structure of dehaloperoxidase B in complex with alpha-terpinene 2021-10-17 2022-11-23 Malewschick, T.,Yun, D.,de Serrano, V.,Ghiladi, R.A. The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes To Be Published 0 0 0 0 7SJC Crystal structure of dehaloperoxidase B in complex with gamma-terpinene 2021-10-17 2022-11-23 Malewschick, T.,Yun, D.,de Serrano, V.,Ghiladi, R.A. The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes To Be Published 0 0 0 0 7SJD Crystal structure of dehaloperoxidase B in complex with terpinolene 2021-10-17 2022-11-23 Malewschick, T.,Yun, D.,de Serrano, V.,Ghiladi, R.A. The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes To Be Published 0 0 0 0 7SJE Crystal structure of dehaloperoxidase B in complex with p-cymene 2021-10-17 2022-11-23 Malewschick, T.,Yun, D.,de Serrano, V.,Ghiladi, R.A. The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes To Be Published 0 0 0 0 7SJF Structure of Dehaloperoxidase B in Complex with Thymol 2021-10-17 2022-11-23 Malewschick, T.,Yun, D.,de Serrano, V.,Ghiladi, R.A. The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes To Be Published 0 0 0 0 7SJG Structure of Dehaloperoxidase B in Complex with Thymoquinone 2021-10-17 2022-11-23 Malewschick, T.,Yun, D.,de Serrano, V.,Ghiladi, R.A. The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes To Be Published 0 0 0 0 7SJH Crystal structure of dehaloperoxidase B in complex with S-(-)-limonene 2021-10-17 2022-11-23 Malewschick, T.,Yun, D.,de Serrano, V.,Ghiladi, R.A. The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes To Be Published 0 0 0 0 7SJI Crystal structure of dehaloperoxidase B in complex with R-(+)-limonene 2021-10-17 2022-11-23 Malewschick, T.,Yun, D.,de Serrano, V.,Ghiladi, R.A. The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes To Be Published 0 0 0 0 8EV1 36516582 Dual Modulators 2022-10-19 2022-12-28 Tinivella, A.,Nwachukwu, J.C.,Angeli, A.,Foschi, F.,Benatti, A.L.,Pinzi, L.,Izard, T.,Ferraroni, M.,Erumbi, R.,Christodoulou, M.S.,Passarella, D.,Supuran, C.T.,Nettles, K.W.,Rastelli, G. Design, synthesis, biological evaluation and crystal structure determination of dual modulators of carbonic anhydrases and estrogen receptors. Eur.J.Med.Chem. 2022 246 115011 115011 8EV2 36516582 Dual Modulators 2022-10-19 2022-12-28 Tinivella, A.,Nwachukwu, J.C.,Angeli, A.,Foschi, F.,Benatti, A.L.,Pinzi, L.,Izard, T.,Ferraroni, M.,Erumbi, R.,Christodoulou, M.S.,Passarella, D.,Supuran, C.T.,Nettles, K.W.,Rastelli, G. Design, synthesis, biological evaluation and crystal structure determination of dual modulators of carbonic anhydrases and estrogen receptors. Eur.J.Med.Chem. 2022 246 115011 115011 8DV6 36626401 Zika virus envelope protein structure in complex with a potent Human mAb 2022-07-28 2023-01-04 Adams, C.,Carbaugh, D.L.,Shu, B.,Ng, T.S.,Castillo, I.N.,Bhowmik, R.,Segovia-Chumbez, B.,Puhl, A.C.,Graham, S.,Diehl, S.A.,Lazear, H.M.,Lok, S.M.,de Silva, A.M.,Premkumar, L. Structure and neutralization mechanism of a human antibody targeting a complex Epitope on Zika virus. Plos Pathog. 2023 19 0 0 7SIB 36579626 Myocilin OLF mutant K500R 2021-10-13 2023-01-11 Scelsi, H.F.,Hill, K.R.,Barlow, B.M.,Martin, M.D.,Lieberman, R.L. Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability. Dis Model Mech 2023 16 0 0 7SJT 36579626 Myocilin OLF mutant K398R 2021-10-19 2023-01-11 Scelsi, H.F.,Hill, K.R.,Barlow, B.M.,Martin, M.D.,Lieberman, R.L. Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability. Dis Model Mech 2023 16 0 0 8CX3 36968141 Crystal structure of full-length mesothelin 2022-05-19 2023-02-01 Zhan, J.,Lin, D.,Watson, N.,Esser, L.,Tang, W.K.,Zhang, A.,Liu, X.,Hassan, R.,Gleinich, A.,Shajahan, A.,Azadi, P.,Pastan, I.,Xia, D. Structures of Cancer Antigen Mesothelin and Its Complexes with Therapeutic Antibodies. Cancer Res Commun 2023 3 175 191 8F0F 36738797 HIV-1 wild type protease with GRL-110-19A, a chloroacetamide derivative based on Darunavir as P2' group 2022-11-02 2023-02-15 Ghosh, A.K.,Shahabi, D.,Kipfmiller, M.,Ghosh, A.K.,Johnson, M.,Wang, Y.F.,Agniswamy, J.,Amano, M.,Weber, I.T.,Mitsuya, H. Evaluation of darunavir-derived HIV-1 protease inhibitors incorporating P2' amide-derivatives: Synthesis, biological evaluation and structural studies. Bioorg.Med.Chem.Lett. 2023 83 129168 129168 8EC1 37599788 5'-CGCGAATTCGCG-3' and benzimidazole diamidine (DB1476) comlpex with ligand orientation I 2022-08-31 2023-02-22 Ogbonna, E.N.,Paul, A.,Farahat, A.A.,Terrell, J.R.,Mineva, E.,Ogbonna, V.,Boykin, D.W.,Wilson, W.D. X-ray Structure Characterization of the Selective Recognition of AT Base Pair Sequences. Acs Bio Med Chem Au 2023 3 335 348 8ED6 37599788 5'-CGCGAATTCGCG-3' and benzimidazole diamidine (DB1476) complex with ligand orientation II 2022-09-03 2023-02-22 Ogbonna, E.N.,Paul, A.,Farahat, A.A.,Terrell, J.R.,Mineva, E.,Ogbonna, V.,Boykin, D.W.,Wilson, W.D. X-ray Structure Characterization of the Selective Recognition of AT Base Pair Sequences. Acs Bio Med Chem Au 2023 3 335 348 8EGW 36797229 Complex of Fat4(EC1-4) bound to Dchs1(EC1-3) 2022-09-13 2023-02-22 Medina, E.,Easa, Y.,Lester, D.K.,Lau, E.K.,Sprinzak, D.,Luca, V.C. Structure of the planar cell polarity cadherins Fat4 and Dachsous1. Nat Commun 2023 14 891 891 8EGX 36797229 Complex of Fat4(EC1-4) bound to Dchs1(EC1-4) 2022-09-13 2023-02-22 Medina, E.,Easa, Y.,Lester, D.K.,Lau, E.K.,Sprinzak, D.,Luca, V.C. Structure of the planar cell polarity cadherins Fat4 and Dachsous1. Nat Commun 2023 14 891 891 8EVK Crystal structure of Helicobacter pylori dihydroneopterin aldolase (DHNA) 2022-10-20 2023-03-01 Shaw, G.X.,Fan, L.,Cherry, S.,Shi, G.,Tropea, J.E.,Ji, X. Structure of Helicobacter pylori dihydroneopterin aldolase suggests a fragment-based strategy for isozyme-specific inhibitor design Curr Res Struct Biol 2023 5 100095 0 7UE3 PANK3 complex structure with compound PZ-3804 2022-03-21 2023-03-29 Tangallapally, R.,Edwards, A.,Subramanian, C.,Sharma, L.K.,Yun, M.,White, S.W.,Jackowski, S.,Rock, C.O.,Lee, R.E. Discovery of hPANK Activators with Improved Pharmacological Properties To Be Published 0 0 0 0 7UE5 PANK3 complex structure with compound PZ-3741 2022-03-21 2023-03-29 Tangallapally, R.,Edwards, A.,Subramanian, C.,Sharma, L.K.,Yun, M.,White, S.W.,Jackowski, S.,Rock, C.O.,Lee, R.E. Discovery of hPANK Activators with Improved Pharmacological Properties To Be Published 0 0 0 0 7UEO PANK3 complex structure with compound PZ-3977 2022-03-22 2023-03-29 Tangallapally, R.,Edwards, A.,Subramanian, C.,Sharma, L.K.,Yun, M.,White, S.W.,Jackowski, S.,Rock, C.O.,Lee, R.E. Discovery of hPANK Activators with Improved Pharmacological Properties To Be Published 0 0 0 0 7UEX PANK3 complex structure with compound PZ-4127 2022-03-22 2023-03-29 Tangallapally, R.,Edwards, A.,Subramanian, C.,Sharma, L.K.,Yun, M.,White, S.W.,Jackowski, S.,Rock, C.O.,Lee, R.E. Discovery of hPANK Activators with Improved Pharmacological Properties To Be Published 0 0 0 0 7UE6 PANK3 complex structure with compound PZ-3802 2022-03-21 2023-04-05 Tangallapally, R.,Edwards, A.,Subramanian, C.,Sharma, L.K.,Yun, M.,White, S.W.,Jackowski, S.,Rock, C.O.,Lee, R.E. Discovery of hPANK Activators with Improved Pharmacological Properties To Be Published 0 0 0 0 7TXW 37061547 Crystal structure of the complex of the malaria sexual stage protein and vaccine target Pfs25 with the Fab fragment of a transmission blocking antibody 1G2 2022-02-10 2023-04-12 MacDonald, N.J.,Singh, K.,Reiter, K.,Nguyen, V.,Shimp Jr., R.,Gittis, A.G.,Chen, B.,Burkhardt, M.,Zhang, B.,Wang, Z.,Herrera, R.,Moler, M.,Lee, D.Y.,Orr-Gonzalez, S.,Herrod, J.,Lambert, L.E.,Rausch, K.M.,Muratova, O.,Jones, D.S.,Wu, Y.,Jin, A.J.,Garboczi, D.N.,Duffy, P.E.,Narum, D.L. Structural and immunological differences in Plasmodium falciparum sexual stage transmission-blocking vaccines comprised of Pfs25-EPA nanoparticles. Npj Vaccines 2023 8 56 56 7UFY 36051621 Crystal structure of TDP1 complexed with compound XZ766 2022-03-23 2023-04-12 Zhao, X.Z.,Wang, W.,Lountos, G.T.,Tropea, J.E.,Needle, D.,Pommier, Y.,Burke Jr., T.R. Phosphonic acid-containing inhibitors of tyrosyl-DNA phosphodiesterase 1. Front Chem 2022 10 910953 910953 7UFZ 36051621 Crystal structure of TDP1 complexed with compound XZ768 2022-03-23 2023-04-12 Zhao, X.Z.,Wang, W.,Lountos, G.T.,Tropea, J.E.,Needle, D.,Pommier, Y.,Burke Jr., T.R. Phosphonic acid-containing inhibitors of tyrosyl-DNA phosphodiesterase 1. Front Chem 2022 10 910953 910953 7ULJ 36938943 Hsp90b N-terminal domain in complex with 42C 2022-04-05 2023-04-12 Stachowski, T.R.,Nithianantham, S.,Vanarotti, M.,Lopez, K.,Fischer, M. Pan-HSP90 ligand binding reveals isoform-specific differences in plasticity and water networks. Protein Sci. 2023 32 0 0 8CVQ 37181631 Crystal structure of TDP1 complexed with compound XZ761 2022-05-18 2023-04-12 Zhao, X.Z.,Wang, W.,Lountos, G.T.,Kiselev, E.,Tropea, J.E.,Needle, D.,Pommier, Y.,Burke Jr., T.R. Identification of multidentate tyrosyl-DNA phosphodiesterase 1 (TDP1) inhibitors that simultaneously access the DNA, protein and catalytic-binding sites by oxime diversification. Rsc Chem Biol 2023 4 334 343 8CW2 37181631 Crystal structure of TDP1 complexed with compound XZ760 2022-05-18 2023-04-12 Zhao, X.Z.,Wang, W.,Lountos, G.T.,Kiselev, E.,Tropea, J.E.,Needle, D.,Pommier, Y.,Burke Jr., T.R. Identification of multidentate tyrosyl-DNA phosphodiesterase 1 (TDP1) inhibitors that simultaneously access the DNA, protein and catalytic-binding sites by oxime diversification. Rsc Chem Biol 2023 4 334 343 8SSX Crystal structure of Bacillus anthracis dihydrofolate reductase at 1.65-A resolution 2023-05-09 2023-05-17 Shaw, G.X.,Li, Y.,Wu, Y.,Yan, H.,Ji, X. Crystal structure of Bacillus anthracis dihydrofolate reductase at 1.65-A resolution To be published 0 0 0 0 8EC3 37380082 The crystal structure of the complement inhibitory domain of Borrelia hermsii FbpC. 2022-09-01 2023-06-07 Roy, S.,Booth Jr., C.E.,Powell-Pierce, A.D.,Schulz, A.M.,Skare, J.T.,Garcia, B.L. Conformational dynamics of complement protease C1r inhibitor proteins from Lyme disease- and relapsing fever-causing spirochetes. J.Biol.Chem. 2023 299 104972 104972 8FTG 37243579 Biophysical and Structural Characterization of an Anti-Caffeine VHH Antibody 2023-01-12 2023-06-07 Smith, C.A.,Sonneson, G.J.,Hoey, R.J.,Hinerman, J.M.,Sheehy, K.,Walter, R.,Herr, A.B.,Horn, J.R. Molecular recognition requires dimerization of a VHH antibody. Mabs 2023 15 2215363 2215363 8GME Crystal structure of the gp32-Dda-dT17 complex 2023-03-24 2023-06-28 He, X.,Yun, M.K.,White, S.W. Crystal structure of the gp32-Dda-dT17 complex To Be Published 0 0 0 0 8DHI Crystal Structure of Clostridioides difficile Protein Tyrosine Phosphatase at pH 8.5 2022-06-27 2023-07-05 Lountos, G.T.,Tropea, J.E. Crystal Structure of Clostridioides difficile Protein Tyrosine Phosphatase at pH 8.5 To Be Published 0 0 0 0 8DHJ Crystal structure of Clostridioides difficile Protein Tyrosine Phosphatase at pH 7.5 2022-06-27 2023-07-05 Lountos, G.T.,Tropea, J.E. Crystal structure of Clostridioides difficile Protein Tyrosine Phosphatase at pH 7.5 To Be Published 0 0 0 0 8E3R 37352101 Human PU.1 ETS-Domain (165-270) Bound to d(AATAAAAGGAAGTGGG) 2022-08-17 2023-07-05 Terrell, J.R.,Taylor, S.J.,Schneider, A.L.,Lu, Y.,Vernon, T.N.,Xhani, S.,Gumpper, R.H.,Luo, M.,Wilson, W.D.,Steidl, U.,Poon, G.M.K. DNA selection by the master transcription factor PU.1. Cell Rep 2023 42 112671 112671 8FNA 37356715 Crystal structure of the C-terminal Fg domain of human TNR 2022-12-27 2023-07-12 Sinha, A.,Kawakami, J.,Cole, K.S.,Ladutska, A.,Nguyen, M.Y.,Zalmai, M.S.,Holder, B.L.,Broerman, V.M.,Matthews, R.T.,Bouyain, S. Protein-protein interactions between tenascin-R and RPTP zeta /phosphacan are critical to maintain the architecture of perineuronal nets. J.Biol.Chem. 2023 299 104952 104952 8EF8 Staphylococcus aureus ClpP Y63W in complex with compound 3471 2022-09-08 2023-07-19 Singh, A.C.,Zhao, Y.,Griffith, E.C.,Tangallapally, R.,Jarret, M.W.,Lee, R.E. Development of a high throughput and site specific, fluorescent polarization assay to screen for activators of Caseinolytic Protease P leads to the discovery of synthetically tractable new activator class To Be Published 0 0 0 0 8EJN 37480762 Structure of dehaloperoxidase A in complex with 2,4-dichlorophenol 2022-09-17 2023-08-23 Aktar, M.S.,de Serrano, V.,Ghiladi, R.,Franzen, S. Comparative study of the binding and activation of 2,4-dichlorophenol by dehaloperoxidase A and B. J.Inorg.Biochem. 2023 247 112332 112332 8EED 37561630 Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ107-B in complex with ZIKV E glycoprotein 2022-09-07 2023-08-30 Sankhala, R.S.,Dussupt, V.,Donofrio, G.,Gromowski, G.D.,De La Barrera, R.A.,Larocca, R.A.,Mendez-Rivera, L.,Lee, A.,Choe, M.,Zaky, W.,Mantus, G.,Jensen, J.L.,Chen, W.H.,Gohain, N.,Bai, H.,McCracken, M.K.,Mason, R.D.,Leggat, D.,Slike, B.M.,Tran, U.,Jian, N.,Abbink, P.,Peterson, R.,Mendes, E.A.,Freitas de Oliveira Franca, R.,Calvet, G.A.,Bispo de Filippis, A.M.,McDermott, A.,Roederer, M.,Hernandez, M.,Albertus, A.,Davidson, E.,Doranz, B.J.,Rolland, M.,Robb, M.L.,Lynch, R.M.,Barouch, D.H.,Jarman, R.G.,Thomas, S.J.,Modjarrad, K.,Michael, N.L.,Krebs, S.J.,Joyce, M.G. Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes. Cell Rep 2023 42 112942 112942 8FXT 37598249 Escherichia coli periplasmic Glucose-Binding Protein glucose complex: Acrylodan conjugate attached at W183C 2023-01-25 2023-08-30 Allert, M.J.,Kumar, S.,Wang, Y.,Beese, L.S.,Hellinga, H.W. Chromophore carbonyl twisting in fluorescent biosensors encodes direct readout of protein conformations with multicolor switching. Commun Chem 2023 6 168 168 7U4A Crystal Structure of Zika virus xrRNA1 mutant 2022-02-28 2023-09-06 Thompson, R.D.,Carbaugh, D.L.,Nielsen, J.R.,Witt, C.,Meganck, R.M.,Rangadurai, A.,Zhao, B.,Bonin, J.P.,Nathan, N.T.,Marzluff, W.F.,Frank, A.T.,Lazear, H.M.,Zhang, Q. Dynamic Basis of Xrn1 Resistance in Mosquito-borne Flavivirus RNA To Be Published 0 0 0 0 8EDY KRAS4b A146T 1-185 bound to GDP 2022-09-06 2023-09-20 Betts, L.,Rossman, K.L. KRAS4b A146T 1-185 bound to GDP To Be Published 0 0 0 0 8EER KRAS4B A146V 1-185 bound to GDP 2022-09-07 2023-09-20 Rossman, K.L.,Betts, L. KRAS4B A146V 1-185 bound to GDP To Be Published 0 0 0 0 8EIE KRAS4b K117N 1-185 bound to GNP-Mg2+ 2022-09-14 2023-09-20 Betts, L.,Rossman, K.L. A crystallographic view of the fast-cycling KRAS mutant, K117N To Be Published 0 0 0 0 8TWU 37611404 Crystal structure of Cytochrome P450 AspB bound to N1-methylated cyclo-L-Trp-L-Pro 2023-08-21 2023-09-20 Gering, H.E.,Li, X.,Tang, H.,Swartz, P.D.,Chang, W.C.,Makris, T.M. A Ferric-Superoxide Intermediate Initiates P450-Catalyzed Cyclic Dipeptide Dimerization. J.Am.Chem.Soc. 2023 145 19256 19264 8F5I 38036525 SARS-CoV-2 S2 helix epitope scaffold bound by antibody DH1057.1 2022-11-14 2023-10-11 Kapingidza, A.B.,Marston, D.J.,Harris, C.,Wrapp, D.,Winters, K.,Mielke, D.,Xiaozhi, L.,Yin, Q.,Foulger, A.,Parks, R.,Barr, M.,Newman, A.,Schafer, A.,Eaton, A.,Flores, J.M.,Harner, A.,Catanzaro Jr., N.J.,Mallory, M.L.,Mattocks, M.D.,Beverly, C.,Rhodes, B.,Mansouri, K.,Van Itallie, E.,Vure, P.,Dunn, B.,Keyes, T.,Stanfield-Oakley, S.,Woods, C.W.,Petzold, E.A.,Walter, E.B.,Wiehe, K.,Edwards, R.J.,Montefiori, D.C.,Ferrari, G.,Baric, R.,Cain, D.W.,Saunders, K.O.,Haynes, B.F.,Azoitei, M.L. Engineered immunogens to elicit antibodies against conserved coronavirus epitopes. Nat Commun 2023 14 7897 7897 8GHH 37236358 Crystal structure of Staphylococcus aureus Lysophosphatidylglycerol phospholipase D 2023-03-10 2023-11-01 Subramanian, C.,Yun, M.K.,Frank, M.M.,Rock, C.O. Lysophosphatidylglycerol (LPG) phospholipase D maintains membrane homeostasis in Staphylococcus aureus by converting LPG to lysophosphatidic acid. J.Biol.Chem. 2023 299 104863 104863 8FVS Bromodomain of CBP liganded with CCS1477int 2023-01-19 2024-01-24 Schonbrunn, E.,Bikowitz, M. Group 3 medulloblastoma transcriptional networks are sensitive to EP300/CBP bromodomain inhibition To Be Published 0 0 0 0 8FVF Bromodomain of EP300 liganded with CCS-1477 2023-01-18 2024-02-07 Schonbrunn, E.,Bikowitz, M. Group 3 medulloblastoma transcriptional networks are sensitive to EP300/CBP bromodomain inhibition To Be Published 0 0 0 0 8FVK First bromodomain of BRD4 liganded with CCS-1477 2023-01-19 2024-02-07 Schonbrunn, E.,Bikowitz, M. Group 3 medulloblastoma transcriptional networks are sensitive to EP300/CBP bromodomain inhibition To Be Published 0 0 0 0 8SXC Crystal Structure of Fluorescent Protein Fusion Red 2 2023-05-21 2024-02-07 Pletnev, S.,Pletneva, N.,Pletnev, V. Crystal Structure of Fluorescent Protein Fusion Red 2 To Be Published 0 0 0 0 8VDA 38310992 Crystal structure of Bacillus subtilis FabHA-coenzyme A complex 2023-12-14 2024-02-14 Radka, C.D.,Rock, C.O. Crystal structures of the fatty acid biosynthesis initiation enzymes in Bacillus subtilis. J.Struct.Biol. 2024 216 108065 108065 8GDO Crystal structure of DH1010 Fab 2023-03-06 2024-03-13 Lindenberger, J.,Acharya, P. Crystal structure of DH1010 Fab To Be Published 0 0 0 0 8V9Q 38416819 Crystal structure of mGalNAc-T1 in complex with the mucin glycopeptide Muc5AC-13, Mn2+, and UDP. 2023-12-08 2024-03-13 Collette, A.M.,Hassan, S.A.,Schmidt, S.I.,Lara, A.J.,Yang, W.,Samara, N.L. An unusual dual sugar-binding lectin domain controls the substrate specificity of a mucin-type O-glycosyltransferase. Sci Adv 2024 10 0 0