PDB_ID PUBMED_CID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS CITATION TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 2OKQ Crystal structure of unknown conserved ybaA protein from Shigella flexneri 2007-01-17 2007-02-06 Minasov, G.,Vorontsov, I.I.,Shuvalova, L.,Brunzelle, J.S.,Kiryukhina, O.,Collart, F.R.,Joachimiak, A.,Anderson, W.F. Crystal structure of unknown conserved ybaA protein from Shigella flexneri TO BE PUBLISHED 0 0 0 0 2OMK Structure of the Bacteroides Thetaiotaomicron Thiamin Pyrophosphokinase 2007-01-22 2007-02-06 Vorontsov, I.I.,Minasov, G.,Shuvalova, L.,Abdullah, J.,Collart, F.R.,Joachimiak, A.,Anderson, W.F. Structure of the Bacteroides Thetaiotaomicron Thiamin Pyrophosphokinase To be Published 0 0 0 0 2PUH 17442675 Crystal Structure of the S112A mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400, in complex with its substrate HOPDA 2007-05-09 2007-05-22 Horsman, G.P.,Bhowmik, S.,Seah, S.Y.,Kumar, P.,Bolin, J.T.,Eltis, L.D. The Tautomeric Half-reaction of BphD, a C-C Bond Hydrolase: KINETIC AND STRUCTURAL EVIDENCE SUPPORTING A KEY ROLE FOR HISTIDINE 265 OF THE CATALYTIC TRIAD. J.Biol.Chem. 2007 282 19894 19904 2PUJ 17442675 Crystal Structure of the S112A/H265A double mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400, in complex with its substrate HOPDA 2007-05-09 2007-05-22 Horsman, G.P.,Bhowmik, S.,Seah, S.Y.,Kumar, P.,Bolin, J.T.,Eltis, L.D. The Tautomeric Half-reaction of BphD, a C-C Bond Hydrolase: KINETIC AND STRUCTURAL EVIDENCE SUPPORTING A KEY ROLE FOR HISTIDINE 265 OF THE CATALYTIC TRIAD. J.Biol.Chem. 2007 282 19894 19904 2Q7A 17920629 Crystal structure of the cell surface heme transfer protein Shp 2007-06-06 2007-09-18 Aranda IV, R.,Worley, C.E.,Liu, M.,Bitto, E.,Cates, M.S.,Olson, J.S.,Lei, B.,Phillips Jr., G.N. Bis-methionyl coordination in the crystal structure of the heme-binding domain of the streptococcal cell surface protein Shp. J.Mol.Biol. 2007 374 374 383 2QPA 17949747 Crystal Structure of S.cerevisiae Vps4 in the presence of ADP 2007-07-23 2007-10-09 Xiao, J.,Xia, H.,Yoshino-Koh, K.,Zhou, J.,Xu, Z. Structural characterization of the ATPase reaction cycle of endosomal AAA protein Vps4. J.Mol.Biol. 2007 374 655 670 2R8V 18184660 Native structure of N-acetylglutamate synthase from Neisseria gonorrhoeae 2007-09-11 2008-01-15 Shi, D.,Sagar, V.,Jin, Z.,Yu, X.,Caldovic, L.,Morizono, H.,Allewell, N.M.,Tuchman, M. The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation. J.Biol.Chem. 2008 283 7176 7184 2R98 18184660 Crystal Structure of N-acetylglutamate synthase (selenoMet substituted) from Neisseria gonorrhoeae 2007-09-12 2008-01-15 Shi, D.,Sagar, V.,Jin, Z.,Yu, X.,Caldovic, L.,Morizono, H.,Allewell, N.M.,Tuchman, M. The crystal structure of N-acetyl-L-glutamate synthase from Neisseria gonorrhoeae provides insights into mechanisms of catalysis and regulation. J.Biol.Chem. 2008 283 7176 7184 2RGN 18096806 Crystal Structure of p63RhoGEF complex with Galpha-q and RhoA 2007-10-04 2008-01-15 Lutz, S.,Shankaranarayanan, A.,Coco, C.,Ridilla, M.,Nance, M.R.,Vettel, C.,Baltus, D.,Evelyn, C.R.,Neubig, R.R.,Wieland, T.,Tesmer, J.J. Structure of Galphaq-p63RhoGEF-RhoA complex reveals a pathway for the activation of RhoA by GPCRs. Science 2007 318 1923 1927 3B3Q 18084303 Crystal structure of a synaptic adhesion complex 2007-10-22 2008-01-15 Chen, X.,Liu, H.,Shim, A.H.,Focia, P.J.,He, X. Structural basis for synaptic adhesion mediated by neuroligin-neurexin interactions. Nat.Struct.Mol.Biol. 2008 15 50 56 2RKK 18194651 Crystal Structure of S.cerevisiae Vta1 N-terminal domain 2007-10-16 2008-01-22 Xiao, J.,Xia, H.,Zhou, J.,Azmi, I.F.,Davies, B.A.,Katzmann, D.J.,Xu, Z. Structural basis of vta1 function in the multivesicular body sorting pathway. Dev.Cell 2008 14 37 49 3BUA 18202258 Crystal Structure of TRF2 TRFH domain and APOLLO peptide complex 2008-01-02 2008-02-19 Chen, Y.,Yang, Y.,van Overbeek, M.,Donigian, J.R.,Baciu, P.,de Lange, T.,Lei, M. A shared docking motif in TRF1 and TRF2 used for differential recruitment of telomeric proteins. Science 2008 319 1092 1096 2R31 19383603 Crystal structure of atp12p from paracoccus denitrificans 2007-08-28 2008-03-25 Ludlam, A.,Brunzelle, J.,Pribyl, T.,Xu, X.,Gatti, D.L.,Ackerman, S.H. Chaperones of F1-ATPase. J.Biol.Chem. 2009 284 17138 17146 3BUS 18502766 Crystal Structure of RebM 2008-01-03 2008-03-25 Singh, S.,McCoy, J.G.,Zhang, C.,Bingman, C.A.,Phillips Jr., G.N.,Thorson, J.S. Structure and mechanism of the rebeccamycin sugar 4'-O-methyltransferase RebM. J.Biol.Chem. 2008 283 22628 22636 3C4M 18375760 Structure of human parathyroid hormone in complex with the extracellular domain of its G-protein-coupled receptor (PTH1R) 2008-01-30 2008-04-08 Pioszak, A.A.,Xu, H.E. Molecular recognition of parathyroid hormone by its G protein-coupled receptor. Proc.Natl.Acad.Sci.Usa 2008 105 5034 5039 3BUJ 18561189 Crystal Structure of CalO2 2008-01-02 2008-04-29 McCoy, J.G.,Johnson, H.D.,Singh, S.,Bingman, C.A.,Lei, I.K.,Thorson, J.S.,Phillips Jr., G.N. Structural characterization of CalO2: a putative orsellinic acid P450 oxidase in the calicheamicin biosynthetic pathway. Proteins 2009 74 50 60 2RD7 21454577 Human Complement Membrane Attack Proteins Share a Common Fold with Bacterial Cytolysins 2007-09-21 2008-05-27 Lovelace, L.L.,Cooper, C.L.,Sodetz, J.M.,Lebioda, L. Structure of human C8 protein provides mechanistic insight into membrane pore formation by complement. J. Biol. Chem. 2011 286 17585 17592 3CHI 18458342 Crystal Structure of Di-iron AurF (Monoclinic form) 2008-03-09 2008-05-27 Choi, Y.S.,Zhang, H.,Brunzelle, J.S.,Nair, S.K.,Zhao, H. In vitro reconstitution and crystal structure of p-aminobenzoate N-oxygenase (AurF) involved in aureothin biosynthesis. Proc.Natl.Acad.Sci.Usa 2008 105 6858 6863 3C94 18591666 ExoI/SSB-Ct complex 2008-02-15 2008-07-08 Lu, D.,Keck, J.L. Structural basis of Escherichia coli single-stranded DNA-binding protein stimulation of exonuclease I. Proc.Natl.Acad.Sci.USA 2008 105 9169 9174 3C95 18591666 Exonuclease I (apo) 2008-02-15 2008-07-08 Lu, D.,Keck, J.L. Structural basis of Escherichia coli single-stranded DNA-binding protein stimulation of exonuclease I. Proc.Natl.Acad.Sci.USA 2008 105 9169 9174 3BVS 18585735 Crystal Structure of Bacillus cereus Alkylpurine DNA Glycosylase AlkD 2008-01-07 2008-07-15 Rubinson, E.H.,Metz, A.H.,O'Quin, J.,Eichman, B.F. A New Protein Architecture for Processing Alkylation Damaged DNA: The Crystal Structure of DNA Glycosylase AlkD. J.Mol.Biol. 2008 381 13 23 3DFF 18559264 The crystal structure of teicoplanin pseudoaglycone deacetylase Orf2 2008-06-11 2008-07-22 Zou, Y.,Brunzelle, J.S.,Nair, S.K. Crystal structures of lipoglycopeptide antibiotic deacetylases: implications for the biosynthesis of a40926 and teicoplanin. Chem.Biol. 2008 15 533 545 3DFI 18559264 The crystal structure of antimicrobial reagent A40926 pseudoaglycone deacetylase Dbv21 2008-06-12 2008-07-22 Zou, Y.,Brunzelle, J.S.,Nair, S.K. Crystal structures of lipoglycopeptide antibiotic deacetylases: implications for the biosynthesis of a40926 and teicoplanin. Chem.Biol. 2008 15 533 545 3DFK 18559264 The crystal structure of teicoplanin pseudoaglycone deacetylase Orf2* bound to one of its products decanoic acid 2008-06-12 2008-07-22 Zou, Y.,Brunzelle, J.S.,Nair, S.K. Crystal structures of lipoglycopeptide antibiotic deacetylases: implications for the biosynthesis of a40926 and teicoplanin. Chem.Biol. 2008 15 533 545 3DFM 18559264 The crystal structure of the zinc inhibited form of teicoplanin deacetylase Orf2 2008-06-12 2008-07-22 Zou, Y.,Brunzelle, J.S.,Nair, S.K. Crystal structures of lipoglycopeptide antibiotic deacetylases: implications for the biosynthesis of a40926 and teicoplanin. Chem.Biol. 2008 15 533 545 2R1H 18831041 met-Trout IV hemoglobin at pH 6.3 2007-08-22 2008-09-02 Aranda, R.,Cai, H.,Worley, C.E.,Levin, E.J.,Li, R.,Olson, J.S.,Phillips Jr., G.N.,Richards, M.P. Structural analysis of fish versus mammalian hemoglobins: Effect of the heme pocket environment on autooxidation and hemin loss. Proteins 2008 75 217 230 2R8E 19726684 Crystal structure of YrbI from Escherichia coli in complex with Mg 2007-09-10 2008-09-23 Biswas, T.,Yi, L.,Aggarwal, P.,Wu, J.,Rubin, J.R.,Stuckey, J.A.,Woodard, R.W.,Tsodikov, O.V. The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE. J.Biol.Chem. 2009 284 30594 30603 2R8X 19726684 Crystal structure of YrbI phosphatase from Escherichia coli 2007-09-11 2008-09-23 Biswas, T.,Yi, L.,Aggarwal, P.,Wu, J.,Rubin, J.R.,Stuckey, J.A.,Woodard, R.W.,Tsodikov, O.V. The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE. J.Biol.Chem. 2009 284 30594 30603 2R8Y 19726684 Crystal structure of YrbI phosphatase from Escherichia coli in a complex with Ca 2007-09-11 2008-09-23 Biswas, T.,Yi, L.,Aggarwal, P.,Wu, J.,Rubin, J.R.,Stuckey, J.A.,Woodard, R.W.,Tsodikov, O.V. The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE. J.Biol.Chem. 2009 284 30594 30603 2R8Z 19726684 Crystal structure of YrbI phosphatase from Escherichia coli in complex with a phosphate and a calcium ion 2007-09-11 2008-09-23 Biswas, T.,Yi, L.,Aggarwal, P.,Wu, J.,Rubin, J.R.,Stuckey, J.A.,Woodard, R.W.,Tsodikov, O.V. The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE. J.Biol.Chem. 2009 284 30594 30603 3EHS 18801728 Crystal structure of the extracellular domain of human corticotropin releasing factor receptor type 1 (CRFR1) 2008-09-14 2008-09-30 Pioszak, A.A.,Parker, N.R.,Suino-Powell, K.,Xu, H.E. Molecular Recognition of Corticotropin-releasing Factor by Its G-protein-coupled Receptor CRFR1. J.Biol.Chem. 2008 283 32900 32912 3EHT 18801728 Crystal structure of the extracellular domain of human corticotropin releasing factor receptor type 1 (CRFR1) in complex with CRF 2008-09-14 2008-09-30 Pioszak, A.A.,Parker, N.R.,Suino-Powell, K.,Xu, H.E. Molecular Recognition of Corticotropin-releasing Factor by Its G-protein-coupled Receptor CRFR1. J.Biol.Chem. 2008 283 32900 32912 3EDN Crystal structure of the Bacillus anthracis phenazine biosynthesis protein, PhzF family 2008-09-03 2008-10-07 Anderson, S.M.,Brunzelle, J.S.,Onopriyenko, O.,Savchenko, A.,Anderson, W.F. Crystal structure of the Bacillus anthracis phenazine biosynthesis protein, PhzF family To be Published 0 0 0 0 3EOM 21904051 2.4 A crystal structure of native glutaryl-coa dehydrogenase from Burkholderia pseudomallei 2008-09-28 2008-10-21 Begley, D.W.,Davies, D.R.,Hartley, R.C.,Hewitt, S.N.,Rychel, A.L.,Myler, P.J.,Van Voorhis, W.C.,Staker, B.L.,Stewart, L.J. Probing conformational states of glutaryl-CoA dehydrogenase by fragment screening. Acta Crystallogr.,Sect.F 2011 67 1060 1069 3EON 21904051 2.55A crystal structure of native glutaryl-coa dehydrogenase from Burkholderia pseudomallei in complex with a small molecule 2008-09-28 2008-10-21 Begley, D.W.,Davies, D.R.,Hartley, R.C.,Hewitt, S.N.,Rychel, A.L.,Myler, P.J.,Van Voorhis, W.C.,Staker, B.L.,Stewart, L.J. Probing conformational states of glutaryl-CoA dehydrogenase by fragment screening. Acta Crystallogr.,Sect.F 2011 67 1060 1069 3EOO 2.9A crystal structure of methyl-isocitrate lyase from Burkholderia pseudomallei 2008-09-28 2008-10-21 SSGCID Crystal structures of isocitrate lyase from Brucella melitensis To be Published 0 0 0 0 3EUO 18940668 crystal structure of a fungal type III polyketide synthase, ORAS 2008-10-10 2008-11-04 Rubin-Pitel, S.B.,Zhang, H.,Vu, T.,Brunzelle, J.S.,Zhao, H.,Nair, S.K. Distinct Structural Elements Dictate the Specificity of the Type III Pentaketide Synthase from Neurospora crassa. Chem.Biol. 2008 15 1079 1090 3F0A 21633970 Structure of a putative n-acetyltransferase (ta0374) in complex with acetyl-coa from thermoplasma acidophilum 2008-10-24 2008-11-11 Filippova, E.V.,Shuvalova, L.,Minasov, G.,Kiryukhina, O.,Zhang, Y.,Clancy, S.,Radhakrishnan, I.,Joachimiak, A.,Anderson, W.F. Crystal structure of the novel PaiA N-acetyltransferase from Thermoplasma acidophilum involved in the negative control of sporulation and degradative enzyme production. Proteins 2011 79 2566 2577 3F1K Crystal Structure of yciK from E. coli, an oxidoreductase, complexed with NADP+ at 2.6A resolution 2008-10-28 2008-11-18 Vijayalakshmi, J.,Meredith, T.C.,Woodard, R.W. Structure of an oxidoreductase, yciK from E. coli, in two crystal forms - NADP+ unbound structure at 0.95 A resolution to be published 0 0 0 0 3F1L The 0.95 A structure of an oxidoreductase, yciK from E.coli 2008-10-28 2008-11-18 Vijayalakshmi, J.,Meredith, T.C.,Woodard, R.W. Structure of an oxidoreductase, yciK from E. coli, in two crystal forms - NADP+ unbound structure at 0.95 A resolution to be published 0 0 0 0 3F4W The 1.65A Crystal Structure of 3-hexulose-6-phosphate synthase from Salmonella typhimurium 2008-11-03 2008-11-25 Vijayalakshmi, J.,Meredith, T.C.,Woodard, R.W. The 1.65A Crystal Structure of 3-hexulose-6-phosphate synthase from Salmonella typhimurium To be Published 0 0 0 0 3BKR 19130179 Crystal Structure of Sterol Carrier Protein-2 like-3 (SCP2-L3) from Aedes Aegypti 2007-12-07 2008-12-09 Dyer, D.H.,Vyazunova, I.,Lorch, J.M.,Forest, K.T.,Lan, Q. Characterization of the yellow fever mosquito sterol carrier protein-2 like 3 gene and ligand-bound protein structure. Mol.Cell.Biochem. 2009 326 67 77 3EJJ 19017797 Structure of M-CSF bound to the first three domains of FMS 2008-09-18 2008-12-09 Chen, X.,Liu, H.,Focia, P.J.,Shim, A.H.,He, X. Structure of macrophage colony stimulating factor bound to FMS: diverse signaling assemblies of class III receptor tyrosine kinases. Proc.Natl.Acad.Sci.USA 2008 105 18267 18272 3D2M 19095660 Crystal structure of N-acetylglutamate synthase from Neisseria gonorrhoeae complexed with coenzyme A and L-glutamate 2008-05-08 2008-12-23 Min, L.,Jin, Z.,Caldovic, L.,Morizono, H.,Allewell, N.M.,Tuchman, M.,Shi, D. Mechanism of Allosteric Inhibition of N-Acetyl-L-glutamate Synthase by L-Arginine. J.Biol.Chem. 2009 284 4873 4880 3D2P 19095660 Crystal structure of N-acetylglutamate synthase from Neisseria gonorrhoeae complexed with coenzyme A and L-arginine 2008-05-08 2008-12-23 Min, L.,Jin, Z.,Caldovic, L.,Morizono, H.,Allewell, N.M.,Tuchman, M.,Shi, D. Mechanism of Allosteric Inhibition of N-Acetyl-L-glutamate Synthase by L-Arginine. J.Biol.Chem. 2009 284 4873 4880 3FGX Structure of uncharacterised protein rbstp2171 from bacillus stearothermophilus 2008-12-08 2008-12-23 Minasov, G.,Filippova, E.V.,Shuvalova, L.,Moy, S.,Joachimiak, A.,Anderson, W.F. Structure of Uncharacterised Protein Rbstp2171 from Bacillus Stearothermophilus To be Published 0 0 0 0 3FIX 21633970 Crystal structure of a putative n-acetyltransferase (ta0374) from thermoplasma acidophilum 2008-12-12 2009-01-13 Filippova, E.V.,Shuvalova, L.,Minasov, G.,Kiryukhina, O.,Zhang, Y.,Clancy, S.,Radhakrishnan, I.,Joachimiak, A.,Anderson, W.F. Crystal structure of the novel PaiA N-acetyltransferase from Thermoplasma acidophilum involved in the negative control of sporulation and degradative enzyme production. Proteins 2011 79 2566 2577 3FF1 Structure of Glucose 6-phosphate Isomerase from Staphylococcus aureus 2008-12-01 2009-02-03 Anderson, S.M.,Brunzelle, J.S.,Onopriyenko, O.,Peterson, S.,Anderson, W.F.,Savchenko, A. Structure of Glucose 6-phosphate Isomerase from Staphylococcus aureus TO BE PUBLISHED 0 0 0 0 3G25 1.9 Angstrom Crystal Structure of Glycerol Kinase (glpK) from Staphylococcus aureus in Complex with Glycerol. 2009-01-30 2009-02-17 Minasov, G.,Skarina, T.,Onopriyenko, O.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.9 Angstrom Crystal Structure of Glycerol Kinase (glpK) from Staphylococcus aureus in Complex with Glycerol. TO BE PUBLISHED 0 0 0 0 3G5W 19224923 Crystal structure of Blue Copper Oxidase from Nitrosomonas europaea 2009-02-05 2009-02-17 Lawton, T.J.,Sayavedra-Soto, L.A.,Arp, D.J.,Rosenzweig, A.C. Crystal structure of a two-domain multicopper oxidase: implications for the evolution of multicopper blue proteins. J.Biol.Chem. 2009 284 10174 10180 3F59 19141864 Crystal structure of ZU5-ANK, the spectrin binding region of human erythroid ankyrin 2008-11-03 2009-02-24 Ipsaro, J.J.,Huang, L.,Mondragon, A. Structures of the spectrin-ankyrin interaction binding domains. Blood 2009 113 5385 5393 3GA7 1.55 Angstrom Crystal Structure of an Acetyl Esterase from Salmonella typhimurium 2009-02-16 2009-02-24 Minasov, G.,Wawrzak, Z.,Brunzelle, J.,Onopriyenko, O.,Skarina, T.,Peterson, S.N.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.55 Angstrom Crystal Structure of an Acetyl Esterase from Salmonella typhimurium. TO BE PUBLISHED 0 0 0 0 3G5T Crystal structure of trans-aconitate 3-methyltransferase from yeast 2009-02-05 2009-03-03 Burgie, E.S.,Bingman, C.A.,Wesenberg, G.E.,Phillips Jr., G.N. Crystal structure of trans-aconitate 3-methyltransferase from yeast To be Published 0 0 0 0 3GC2 1.85 Angstrom Crystal Structure of O-succinylbenzoate Synthase from Salmonella typhimurium in Complex with Succinic Acid 2009-02-21 2009-03-10 Minasov, G.,Wawrzak, Z.,Skarina, T.,Onopriyenko, O.,Peterson, S.N.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.85 Angstrom Crystal Structure of O-succinylbenzoate Synthase from Salmonella typhimurium in Complex with Succinic Acid To be Published 0 0 0 0 3GEU Crystal Structure of IcaR from Staphylococcus aureus, a member of the tetracycline repressor protein family 2009-02-26 2009-03-10 Anderson, S.M.,Brunzelle, J.S.,Wawrzak, Z.,Skarina, T.,Papazisi, L.,Anderson, W.F.,Savchenko, A.,Center for Structural Genomics of Infectious Diseases (CSGID) Crystal Structure of IcaR from Staphylococcus aureus, a member of the tetracycline repressor protein family To be Published 0 0 0 0 3GEU Crystal Structure of IcaR from Staphylococcus aureus, a member of the tetracycline repressor protein family 2009-02-26 2009-03-10 Anderson, S.M.,Brunzelle, J.S.,Wawrzak, Z.,Skarina, T.,Papazisi, L.,Anderson, W.F.,Savchenko, A.,Center for Structural Genomics of Infectious Diseases (CSGID) Crystal Structure of IcaR from Staphylococcus aureus, a member of the tetracycline repressor protein family To be Published 0 0 0 0 3CR6 Crystal Structure of the R132K:R111L:A32E Mutant of Cellular Retinoic Acid Binding Protein Type II Complexed with C15-aldehyde (a retinal analog) at 1.22 Angstrom resolution. 2008-04-04 2009-03-17 Jia, X.,Lee, K.S.,Vasileiou, C.,Borhan, B.,Geiger, J.H. Two distinctive orientations of binding determined by a single mutation in the CRABPII mutant-C15-aldehyde complexes To be Published 0 0 0 0 3GIU 1.25 Angstrom Crystal Structure of Pyrrolidone-Carboxylate Peptidase (pcp) from Staphylococcus aureus 2009-03-06 2009-03-17 Minasov, G.,Wawrzak, Z.,Skarina, T.,Onopriyenko, O.,Peterson, S.N.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.25 Angstrom Crystal Structure of Pyrrolidone-Carboxylate Peptidase (pcp) from Staphylococcus aureus TO BE PUBLISHED 0 0 0 0 3EWK 19271777 Structure of the redox sensor domain of Methylococcus capsulatus (Bath) MmoS 2008-10-15 2009-03-24 Ukaegbu, U.E.,Rosenzweig, A.C. Structure of the Redox Sensor Domain of Methylococcus capsulatus (Bath) MmoS. Biochemistry 2009 48 2207 2215 3GE1 2.7 Angstrom Crystal Structure of Glycerol Kinase (glpK) from Staphylococcus aureus in Complex with ADP and Glycerol 2009-02-24 2009-03-24 Minasov, G.,Brunzelle, J.,Skarina, T.,Onopriyenko, O.,Peterson, S.N.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 2.7 Angstrom Crystal Structure of Glycerol Kinase (glpK) from Staphylococcus aureus in Complex with ADP and Glycerol To be Published 0 0 0 0 3F72 19286656 Crystal Structure of the Staphylococcus aureus pI258 CadC Metal Binding Site 2 Mutant 2008-11-07 2009-04-07 Kandegedara, A.,Thiyagarajan, S.,Kondapalli, K.C.,Stemmler, T.L.,Rosen, B.P. Role of bound Zn(II) in the CadC Cd(II)/Pb(II)/Zn(II)-responsive repressor. J.Biol.Chem. 2009 284 14958 14965 3H02 2.15 Angstrom Resolution Crystal Structure of Naphthoate Synthase from Salmonella typhimurium. 2009-04-08 2009-04-21 Minasov, G.,Wawrzak, Z.,Skarina, T.,Onopriyenko, O.,Peterson, S.N.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 2.15 Angstrom Resolution Crystal Structure of Naphthoate Synthase from Salmonella typhimurium. TO BE PUBLISHED 0 0 0 0 3H0P 2.0 Angstrom Crystal Structure of an Acyl Carrier Protein S-malonyltransferase from Salmonella typhimurium. 2009-04-10 2009-04-21 Minasov, G.,Wawrzak, Z.,Skarina, T.,Onopriyenko, O.,Peterson, S.N.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 2.0 Angstrom Crystal Structure of an Acyl Carrier Protein S-malonyltransferase from Salmonella typhimurium. TO BE PUBLISHED 0 0 0 0 3E0I 19228070 Cu2+ substituted Aquifex aeolicus KDO8PS in complex with PEP 2008-07-31 2009-05-12 Kona, F.,Tao, P.,Martin, P.,Xu, X.,Gatti, D.L. Electronic structure of the metal center in the Cd(2+), Zn(2+), and Cu(2+) substituted forms of KDO8P synthase: implications for catalysis. Biochemistry 2009 48 3610 3630 3E12 19228070 Cu2+ substituted Aquifex aeolicus KDO8PS in complex with KDO8P 2008-08-01 2009-05-12 Kona, F.,Tao, P.,Martin, P.,Xu, X.,Gatti, D.L. Electronic structure of the metal center in the Cd(2+), Zn(2+), and Cu(2+) substituted forms of KDO8P synthase: implications for catalysis. Biochemistry 2009 48 3610 3630 3GRI The Crystal Structure of a Dihydroorotase from Staphylococcus aureus 2009-03-25 2009-05-19 Brunzelle, J.S.,Wawrzak, Z.,Skarina, T.,Onopriyenko, O.,Savchenko, A.,Anderson, W.F. The Crystal Structure of a Dihydroorotase from Staphylococcus aureus To be Published 0 0 0 0 3G7D 19516340 Native PhpD with Cadmium Atoms 2009-02-09 2009-06-09 Cicchillo, R.M.,Zhang, H.,Blodgett, J.A.,Whitteck, J.T.,Li, G.,Nair, S.K.,van der Donk, W.A.,Metcalf, W.W. An unusual carbon-carbon bond cleavage reaction during phosphinothricin biosynthesis. Nature 2009 459 871 874 3GBF Phpd with cadmium complexed with hydroethylphosphonate (HEP) 2009-02-19 2009-06-09 Cicchillio, R.M.,Zhang, H.,Blodgett, J.A.V.,Whitteck, J.T.,Li, G.,Nair, S.K.,van der Donk, W.A.,Metcalf, W.W. An Unusual Carbon-Carbon Bond Cleavage Reaction in the Biosynthesis of the Herbicide Phosphinothricin To be Published 0 0 0 0 3GLX 19433095 Crystal Structure Analysis of the DtxR(E175K) complexed with Ni(II) 2009-03-12 2009-06-09 D'Aquino, J.A.,Denninger, A.R.,Moulin, A.G.,D'Aquino, K.E.,Ringe, D. Decreased sensitivity to changes in the concentration of metal ions as the basis for the hyperactivity of DtxR(E175K). J.Mol.Biol. 2009 390 112 123 3H2Y Crystal structure of YqeH GTPase from Bacillus anthracis with dGDP bound 2009-04-15 2009-06-16 Brunzelle, J.S.,Anderson, S.M.,Wawrzak, Z.,Xu, U.,Cui, H.,Savchenko, A.,Anderson, W.F. Structure of YqeH GTPase from Bacillus anthracis with dGDP Bound To be Published 0 0 0 0 3H15 19608746 Crystal structure of replication initiation factor MCM10-ID bound to ssDNA 2009-04-10 2009-07-14 Warren, E.M.,Huang, H.,Fanning, E.,Chazin, W.J.,Eichman, B.F. Physical Interactions between Mcm10, DNA, and DNA Polymerase {alpha}. J.Biol.Chem. 2009 284 24662 24672 3H5F 19579245 Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides. 2009-04-22 2009-07-14 Peacock, A.F.,Stuckey, J.A.,Pecoraro, V.L. Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides. Angew.Chem.Int.Ed.Engl. 2009 48 7371 7374 3GE3 19290655 Crystal Structure of the reduced Toluene 4-Monooxygenase HD T201A mutant complex 2009-02-24 2009-07-28 Elsen, N.L.,Bailey, L.J.,Hauser, A.D.,Fox, B.G. Role for threonine 201 in the catalytic cycle of the soluble diiron hydroxylase toluene 4-monooxygenase. Biochemistry 2009 48 3838 3846 3I17 19603486 Crystal structure of the apo R132K:L121E mutant of cellular retinoic acid-binding protein II at 1.68 angstrom resolution 2009-06-25 2009-07-28 Vasileiou, C.,Wang, W.,Jia, X.,Lee, K.S.,Watson, C.T.,Geiger, J.H.,Borhan, B. Elucidating the exact role of engineered CRABPII residues for the formation of a retinal protonated Schiff base. Proteins 2009 77 812 822 3IGX 1.85 Angstrom Resolution Crystal Structure of Transaldolase B (talA) from Francisella tularensis. 2009-07-29 2009-08-11 Minasov, G.,Wawrzak, Z.,Skarina, T.,Gordon, E.,Peterson, S.N.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.85 Angstrom Resolution Crystal Structure of Transaldolase B (talA) from Francisella tularensis. TO BE PUBLISHED 0 0 0 0 3IHS Crystal Structure of a Phosphocarrier Protein HPr from Bacillus anthracis str. Ames 2009-07-30 2009-08-11 Brunzelle, J.S.,Anderson, S.M.,Wawrzak, Z.,Skarina, T.,Onopriyenko, O.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) Crystal Structure of a Phosphocarrier Protein HPr from Bacillus anthracis str. Ames To be Published 0 0 0 0 3HYC 19726684 Crystal structure of E. coli phosphatase YrbI, with Mg, tetragonal form 2009-06-22 2009-09-01 Biswas, T.,Yi, L.,Aggarwal, P.,Wu, J.,Rubin, J.R.,Stuckey, J.A.,Woodard, R.W.,Tsodikov, O.V. The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE. J.Biol.Chem. 2009 284 30594 30603 3I6B 19726684 Crystal structure of YrbI lacking the last 8 residues, in complex with Kdo and inorganic phosphate 2009-07-06 2009-09-01 Biswas, T.,Yi, L.,Aggarwal, P.,Wu, J.,Rubin, J.R.,Stuckey, J.A.,Woodard, R.W.,Tsodikov, O.V. The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE. J.Biol.Chem. 2009 284 30594 30603 3IR4 1.2 Angstrom Crystal Structure of the Glutaredoxin 2 (grxB) from Salmonella typhimurium in complex with Glutathione 2009-08-21 2009-09-01 Minasov, G.,Wawrzak, Z.,Skarina, T.,Onopriyenko, O.,Peterson, S.N.,Halavaty, A.,Dauter, Z.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.2 Angstrom Crystal Structure of the Glutaredoxin 2 (grxB) from Salmonella typhimurium in complex with Glutathione. TO BE PUBLISHED 0 0 0 0 3GGY 19477918 Crystal Structure of S.cerevisiae Ist1 N-terminal domain 2009-03-02 2009-09-08 Xiao, J.,Chen, X.W.,Davies, B.A.,Saltiel, A.R.,Katzmann, D.J.,Xu, Z. Structural basis of Ist1 function and Ist1-Did2 interaction in the multivesicular body pathway and cytokinesis. MOLECULAR BIOLOGY OF THE CELL 2009 20 3514 3524 3GGZ 19477918 Crystal Structure of S.cerevisiae Ist1 N-terminal domain in complex with Did2 MIM motif 2009-03-02 2009-09-08 Xiao, J.,Chen, X.W.,Davies, B.A.,Saltiel, A.R.,Katzmann, D.J.,Xu, Z. Structural basis of Ist1 function and Ist1-Did2 interaction in the multivesicular body pathway and cytokinesis. MOLECULAR BIOLOGY OF THE CELL 2009 20 3514 3524 3I5X 19748356 Structure of Mss116p bound to ssRNA and AMP-PNP 2009-07-06 2009-09-08 Del Campo, M.,Lambowitz, A.M. Structure of the Yeast DEAD box protein Mss116p reveals two wedges that crimp RNA Mol.Cell 2009 35 598 609 3I5Y 19748356 Structure of Mss116p bound to ssRNA containing a single 5-BrU and AMP-PNP 2009-07-06 2009-09-08 Del Campo, M.,Lambowitz, A.M. Structure of the Yeast DEAD box protein Mss116p reveals two wedges that crimp RNA Mol.Cell 2009 35 598 609 3IX3 LasR-OC12 HSL complex 2009-09-03 2009-09-15 Zou, Y.,Nair, S.K. LasR-OC12 HSL complex TO BE PUBLISHED 0 0 0 0 3IX4 19778724 LasR-TP1 complex 2009-09-03 2009-09-15 Zou, Y.,Nair, S.K. Molecular basis for the recognition of structurally distinct autoinducer mimics by the Pseudomonas aeruginosa LasR quorum-sensing signaling receptor. Chem.Biol. 2009 16 961 970 3IX8 19778724 LasR-TP3 complex 2009-09-03 2009-09-15 Zou, Y.,Nair, S.K. Molecular basis for the recognition of structurally distinct autoinducer mimics by the Pseudomonas aeruginosa LasR quorum-sensing signaling receptor. Chem.Biol. 2009 16 961 970 3G1Q 19923211 Crystal structure of sterol 14-alpha demethylase (CYP51) from Trypanosoma brucei in ligand free state 2009-01-30 2009-10-06 Lepesheva, G.I.,Park, H.W.,Hargrove, T.Y.,Vanhollebeke, B.,Wawrzak, Z.,Harp, J.M.,Sundaramoorthy, M.,Nes, W.D.,Pays, E.,Chaudhuri, M.,Villalta, F.,Waterman, M.R. Crystal structures of Trypanosoma brucei sterol 14alpha-demethylase and implications for selective treatment of human infections. J.Biol.Chem. 2010 285 1773 1780 3JPU 19778724 LasR-TP4 complex 2009-09-04 2009-10-13 Zou, Y.,Nair, S.K. Molecular basis for the recognition of structurally distinct autoinducer mimics by the Pseudomonas aeruginosa LasR quorum-sensing signaling receptor. Chem.Biol. 2009 16 961 970 3K1S Crystal Structure of the PTS Cellobiose Specific Enzyme IIA from Bacillus anthracis 2009-09-28 2009-10-13 Anderson, S.M.,Wawrzak, Z.,Onopriyenko, O.,Kwon, K.,Anderson, W.F.,Savchenko, A.,Center for Structural Genomics of Infectious Diseases (CSGID) Crystal Structure of the PTS Cellobiose Specific Enzyme IIA from Bacillus anthracis To be Published 0 0 0 0 3FA6 Crystal structure of the R132K:Y134F:R111L:L121D:T54V mutant of cellular retinoic acid-binding protein II complexed with C15-aldehyde (a retinal analog) at 1.54 angstrom resolution 2008-11-15 2009-10-27 Jia, X.,Lee, K.S.,Vasileiou, C.,Borhan, B.,Geiger, J.H. Two distinctive orientations of binding determined by a single mutation in the CRABPII mutant-C15-aldehyde complexes To be Published 0 0 0 0 3FA7 Crystal structure of the apo R132K:R111L:L121E:R59E mutant of cellular retinoic acid-binding protein II at 1.90 angstrom resolution 2008-11-15 2009-10-27 Jia, X.,Lee, K.S.,Vasileiou, C.,Borhan, B.,Geiger, J.H. Crystal structures of apo cellular retinoic acid-binding protein II mutants: Structural integrity investigated through multiple site mutations To be Published 0 0 0 0 3F8A Crystal Structure of the R132K:R111L:L121E:R59W Mutant of Cellular Retinoic Acid-Binding Protein Type II Complexed with C15-aldehyde (a retinal analog) at 1.95 Angstrom resolution. 2008-11-12 2009-11-10 Lee, K.S.,Berbasova, T.,Vasileiou, C.,Jia, X.,Wang, W.,Choi, Y.,Nossoni, F.,Geiger, J.H.,Borhan, B. Probing Wavelength Regulation with an Engineered Rhodopsin Mimic and a C15-Retinal Analogue Chempluschem 2012 77 273 276 3FEN Crystal structure of the R132K:R111L:A32E mutant of cellular retinoic acid-binding protein II at 1.56 angstrom resolution 2008-11-30 2009-11-10 Jia, X.,Lee, K.S.,Vasileiou, C.,Borhan, B.,Geiger, J.H. Crystal structures of apo cellular retinoic acid-binding protein II mutants: Structural integrity investigated through multiple site mutations To be Published 0 0 0 0 3IGM 19913037 A 2.2A crystal structure of the AP2 domain of PF14_0633 from P. falciparum, bound as a domain-swapped dimer to its cognate DNA 2009-07-28 2009-11-10 Lindner, S.E.,De Silva, E.K.,Keck, J.L.,Llinas, M. Structural Determinants of DNA Binding by a P. falciparum ApiAP2 Transcriptional Regulator. J.Mol.Biol. 2010 395 558 567 3KPT 19903875 Crystal structure of BcpA, the major pilin subunit of Bacillus cereus 2009-11-16 2009-11-24 Budzik, J.M.,Poor, C.B.,Faull, K.F.,Whitelegge, J.P.,He, C.,Schneewind, O. Intramolecular amide bonds stabilize pili on the surface of bacilli. Proc.Natl.Acad.Sci.USA 2009 106 19992 19997 3ISG 19919101 Structure of the class D beta-lactamase OXA-1 in complex with doripenem 2009-08-25 2009-12-01 Schneider, K.D.,Karpen, M.E.,Bonomo, R.A.,Leonard, D.A.,Powers, R.A. The 1.4 A crystal structure of the class D beta-lactamase OXA-1 complexed with doripenem. Biochemistry 2009 48 11840 11847 3KEV 21387409 X-ray crystal structure of a DCUN1 domain-containing protein from Galdieria sulfuraria 2009-10-26 2009-12-01 Burgie, E.S.,Bingman, C.A.,Makino, S.,Wesenberg, G.E.,Pan, X.,Fox, B.G.,Phillips, G.N. Structural architecture of Galdieria sulphuraria DCN1L. Proteins 2011 79 1329 1336 3KAY Crystal structure of abscisic acid receptor PYL1 2009-10-19 2009-12-08 Melcher, K.,Ng, L.-M.,Zhou, X.E.,Soon, F.-F.,Xu, Y.,Suino-Powell, K.-M.,Park, S.-Y.,Weiner, J.J.,Fujii, H.,Chinnusamy, V.,Kovach, A.,Li, J.,Wang, Y.,Li, J.Y.,Peterson, F.C.,Jensen, D.R.,Yong, E.-L.,Volkman, B.F.,Cutler, S.R.,Zhu, J.-K.,Xu, H.E. Agate-latch-lock mechanism for hormone signalling by abscisic acid receptors Nature 2009 462 602 608 3KAZ Crystal structure of abscisic acid receptor PYL2 2009-10-19 2009-12-08 Melcher, K.,Ng, L.-M.,Zhou, X.E.,Soon, F.-F.,Xu, Y.,Suino-Powell, K.-M.,Park, S.-Y.,Weiner, J.J.,Fujii, H.,Chinnusamy, V.,Kovach, A.,Li, J.,Wang, Y.,Li, J.Y.,Peterson, F.C.,Jensen, D.R.,Yong, E.-L.,Volkman, B.F.,Cutler, S.R.,Zhu, J.-K.,Xu, H.E. Agate-latch-lock mechanism for hormone signalling by abscisic acid receptors Nature 2009 462 602 608 3KB0 Crystal structure of abscisic acid-bound PYL2 2009-10-19 2009-12-08 Melcher, K.,Ng, L.-M.,Zhou, X.E.,Soon, F.-F.,Xu, Y.,Suino-Powell, K.-M.,Park, S.-Y.,Weiner, J.J.,Fujii, H.,Chinnusamy, V.,Kovach, A.,Li, J.,Wang, Y.,Li, J.Y.,Peterson, F.C.,Jensen, D.R.,Yong, E.-L.,Volkman, B.F.,Cutler, S.R.,Zhu, J.-K.,Xu, H.E. Agate-latch-lock mechanism for hormone signalling by abscisic acid receptors Nature 2009 462 602 608 3KB3 Crystal structure of abscisic acid-bound PYL2 in complex with HAB1 2009-10-20 2009-12-08 Melcher, K.,Ng, L.-M.,Zhou, X.E.,Soon, F.-F.,Xu, Y.,Suino-Powell, K.-M.,Park, S.-Y.,Weiner, J.J.,Fujii, H.,Chinnusamy, V.,Kovach, A.,Li, J.,Wang, Y.,Li, J.Y.,Peterson, F.C.,Jensen, D.R.,Yong, E.-L.,Volkman, B.F.,Cutler, S.R.,Zhu, J.-K.,Xu, H.E. Agate-latch-lock mechanism for hormone signalling by abscisic acid receptors Nature 2009 462 602 608 3KK6 19955429 Crystal Structure of Cyclooxygenase-1 in complex with celecoxib 2009-11-04 2009-12-15 Rimon, G.,Sidhu, R.S.,Lauver, D.A.,Lee, J.Y.,Sharma, N.P.,Yuan, C.,Frieler, R.A.,Trievel, R.C.,Lucchesi, B.R.,Smith, W.L. Coxibs interfere with the action of aspirin by binding tightly to one monomer of cyclooxygenase-1. Proc.Natl.Acad.Sci.USA 2010 107 28 33 3KEY 20008938 Crystal structure of S. cerevisiae Stn1 C-terminal 2009-10-26 2009-12-22 Sun, J.,Yu, E.Y.,Yang, Y.,Confer, L.A.,Sun, S.H.,Wan, K.,Lue, N.F.,Lei, M. Stn1-Ten1 is an Rpa2-Rpa3-like complex at telomeres. Genes Dev. 2009 23 2900 2914 3KF6 20008938 Crystal structure of S. pombe Stn1-ten1 complex 2009-10-27 2009-12-22 Sun, J.,Yu, E.Y.,Yang, Y.,Confer, L.A.,Sun, S.H.,Wan, K.,Lue, N.F.,Lei, M. Stn1-Ten1 is an Rpa2-Rpa3-like complex at telomeres. Genes Dev. 2009 23 2900 2914 3KF8 20008938 Crystal structure of C. tropicalis Stn1-ten1 complex 2009-10-27 2009-12-22 Sun, J.,Yu, E.Y.,Yang, Y.,Confer, L.A.,Sun, S.H.,Wan, K.,Lue, N.F.,Lei, M. Stn1-Ten1 is an Rpa2-Rpa3-like complex at telomeres. Genes Dev. 2009 23 2900 2914 3KUU Structure of the PurE Phosphoribosylaminoimidazole Carboxylase Catalytic Subunit from Yersinia pestis 2009-11-27 2009-12-22 Anderson, S.M.,Wawrzak, Z.,Brunzelle, J.S.,Onopriyenko, O.,Kwon, K.,Edwards, A.,Savchenko, A.,Anderson, W.F. Structure of the PurE Phosphoribosylaminoimidazole Carboxylase Catalytic Subunit from Yersinia pestis To be Published 0 0 0 0 3KUU Structure of the PurE Phosphoribosylaminoimidazole Carboxylase Catalytic Subunit from Yersinia pestis 2009-11-27 2009-12-22 Anderson, S.M.,Wawrzak, Z.,Brunzelle, J.S.,Onopriyenko, O.,Kwon, K.,Edwards, A.,Savchenko, A.,Anderson, W.F. Structure of the PurE Phosphoribosylaminoimidazole Carboxylase Catalytic Subunit from Yersinia pestis To be Published 0 0 0 0 3L3X 20086010 Crystal structure of DHT-bound androgen receptor in complex with the first motif of steroid receptor coactivator 3 2009-12-18 2010-01-12 Zhou, X.E.,Suino-Powell, K.M.,Li, J.,He, Y.,Mackeigan, J.P.,Melcher, K.,Yong, E.L.,Xu, H.E. Identification of SRC3/AIB1 as a Preferred Coactivator for Hormone-activated Androgen Receptor. J.Biol.Chem. 2010 285 9161 9171 3L3Z 20086010 Crystal structure of DHT-bound androgen receptor in complex with the third motif of steroid receptor coactivator 3 2009-12-18 2010-01-12 Zhou, X.E.,Suino-Powell, K.M.,Li, J.,He, Y.,Mackeigan, J.P.,Melcher, K.,Yong, E.L.,Xu, H.E. Identification of SRC3/AIB1 as a Preferred Coactivator for Hormone-activated Androgen Receptor. J.Biol.Chem. 2010 285 9161 9171 3HL8 20018747 Crystal structure of exonuclease I in complex with inhibitor BCBP 2009-05-27 2010-01-19 Lu, D.,Bernstein, D.A.,Satyshur, K.A.,Keck, J.L. Small-molecule tools for dissecting the roles of SSB/protein interactions in genome maintenance Proc.Natl.Acad.Sci.USA 2010 107 633 638 3HP9 20018747 Crystal structure of SSB/Exonuclease I in complex with inhibitor CFAM 2009-06-03 2010-01-19 Lu, D.,Bernstein, D.A.,Satyshur, K.A.,Keck, J.L. Small-molecule tools for dissecting the roles of SSB/protein interactions in genome maintenance Proc.Natl.Acad.Sci.USA 2010 107 633 638 3I3W Structure of a phosphoglucosamine mutase from Francisella tularensis 2009-07-01 2010-01-19 Brunzelle, J.S.,Wawrzak, Z.,Skarina, T.,Onopriyenko, O.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) Structure of a phosphoglucosamine mutase from Francisella tularensis To be Published 0 0 0 0 3ITW 20122935 Crystal structure of TioX from Micromonospora sp. ML1 2009-08-28 2010-02-16 Biswas, T.,Zolova, O.E.,Lombo, F.,de la Calle, F.,Salas, J.A.,Tsodikov, O.V.,Garneau-Tsodikova, S. A New Scaffold of an Old Protein Fold Ensures Binding to the Bisintercalator Thiocoraline. J.Mol.Biol. 2010 397 495 507 3KXE 20143871 A conserved mode of protein recognition and binding in a ParD-ParE toxin-antitoxin complex 2009-12-03 2010-02-23 Dalton, K.M.,Crosson, S. A Conserved Mode of Protein Recognition and Binding in a ParD-ParE Toxin-Antitoxin Complex. Biochemistry 2010 49 2205 2215 3IDA 20086035 Thermostable Cocaine Esterase with mutations L169K and G173Q, bound to DTT adduct 2009-07-20 2010-03-02 Brim, R.L.,Nance, M.R.,Youngstrom, D.W.,Narasimhan, D.,Zhan, C.G.,Tesmer, J.J.,Sunahara, R.K.,Woods, J.H. A thermally stable form of bacterial cocaine esterase: a potential therapeutic agent for treatment of cocaine abuse. Mol.Pharmacol. 2010 77 593 600 3IVK 19965478 Crystal Structure of the Catalytic Core of an RNA Polymerase Ribozyme Complexed with an Antigen Binding Antibody Fragment 2009-09-01 2010-03-02 Shechner, D.M.,Grant, R.A.,Bagby, S.C.,Koldobskaya, Y.,Piccirilli, J.A.,Bartel, D.P. Crystal structure of the catalytic core of an RNA-polymerase ribozyme. Science 2009 326 1271 1275 3L82 20159592 X-ray Crystal structure of TRF1 and Fbx4 complex 2009-12-29 2010-03-09 Zeng, Z.,Wang, W.,Yang, Y.,Chen, Y.,Yang, X.,Diehl, J.A.,Liu, X.,Lei, M. Structural Basis of Selective Ubiquitination of TRF1 by SCF(Fbx4) Dev.Cell 2010 18 214 225 3LU2 Structure of lmo2462, a Listeria monocytogenes amidohydrolase family putative dipeptidase 2010-02-16 2010-03-09 Anderson, S.M.,Wawrzak, Z.,Onopriyenko, O.,Hasseman, J.,Edwards, A.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) Structure of lmo2462, a Listeria monocytogenes amidohydrolase family putative dipeptidase To be Published 0 0 0 0 3K2M 20357770 Crystal Structure of Monobody HA4/Abl1 SH2 Domain Complex 2009-09-30 2010-03-31 Wojcik, J.,Hantschel, O.,Grebien, F.,Kaupe, I.,Bennett, K.L.,Barkinge, J.,Jones, R.B.,Koide, A.,Superti-Furga, G.,Koide, S. A potent and highly specific FN3 monobody inhibitor of the Abl SH2 domain. Nat.Struct.Mol.Biol. 2010 17 519 527 3LXK 20478313 Structural and Thermodynamic Characterization of the TYK2 and JAK3 Kinase Domains in Complex with CP-690550 and CMP-6 2010-02-25 2010-06-02 Chrencik, J.E.,Patny, A.,Leung, I.K.,Korniski, B.,Emmons, T.L.,Hall, T.,Weinberg, R.A.,Gormley, J.A.,Williams, J.M.,Day, J.E.,Hirsch, J.L.,Kiefer, J.R.,Leone, J.W.,Fischer, H.D.,Sommers, C.D.,Huang, H.C.,Jacobsen, E.J.,Tenbrink, R.E.,Tomasselli, A.G.,Benson, T.E. Structural and thermodynamic characterization of the TYK2 and JAK3 kinase domains in complex with CP-690550 and CMP-6. J.Mol.Biol. 2010 400 413 433 3LXL 20478313 Structural and Thermodynamic Characterization of the TYK2 and JAK3 Kinase Domains in Complex with CP-690550 and CMP-6 2010-02-25 2010-06-02 Chrencik, J.E.,Patny, A.,Leung, I.K.,Korniski, B.,Emmons, T.L.,Hall, T.,Weinberg, R.A.,Gormley, J.A.,Williams, J.M.,Day, J.E.,Hirsch, J.L.,Kiefer, J.R.,Leone, J.W.,Fischer, H.D.,Sommers, C.D.,Huang, H.C.,Jacobsen, E.J.,Tenbrink, R.E.,Tomasselli, A.G.,Benson, T.E. Structural and thermodynamic characterization of the TYK2 and JAK3 kinase domains in complex with CP-690550 and CMP-6. J.Mol.Biol. 2010 400 413 433 3LXN 20478313 Structural and Thermodynamic Characterization of the TYK2 and JAK3 Kinase Domains in Complex with CP-690550 and CMP-6 2010-02-25 2010-06-02 Chrencik, J.E.,Patny, A.,Leung, I.K.,Korniski, B.,Emmons, T.L.,Hall, T.,Weinberg, R.A.,Gormley, J.A.,Williams, J.M.,Day, J.E.,Hirsch, J.L.,Kiefer, J.R.,Leone, J.W.,Fischer, H.D.,Sommers, C.D.,Huang, H.C.,Jacobsen, E.J.,Tenbrink, R.E.,Tomasselli, A.G.,Benson, T.E. Structural and thermodynamic characterization of the TYK2 and JAK3 kinase domains in complex with CP-690550 and CMP-6. J.Mol.Biol. 2010 400 413 433 3LXP 20478313 Structural and Thermodynamic Characterization of the TYK2 and JAK3 Kinase Domains in Complex with CP-690550 and CMP-6 2010-02-25 2010-06-02 Chrencik, J.E.,Patny, A.,Leung, I.K.,Korniski, B.,Emmons, T.L.,Hall, T.,Weinberg, R.A.,Gormley, J.A.,Williams, J.M.,Day, J.E.,Hirsch, J.L.,Kiefer, J.R.,Leone, J.W.,Fischer, H.D.,Sommers, C.D.,Huang, H.C.,Jacobsen, E.J.,Tenbrink, R.E.,Tomasselli, A.G.,Benson, T.E. Structural and thermodynamic characterization of the TYK2 and JAK3 kinase domains in complex with CP-690550 and CMP-6. J.Mol.Biol. 2010 400 413 433 3N3W 2.2 Angstrom Resolution Crystal Structure of Nuclease Domain of Ribonuclase III (rnc) from Campylobacter jejuni 2010-05-20 2010-06-02 Minasov, G.,Halavaty, A.,Shuvalova, L.,Dubrovska, I.,Winsor, J.,Papazisi, L.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 2.2 Angstrom Resolution Crystal Structure of Nuclease Domain of Ribonuclase III (rnc) from Campylobacter jejuni TO BE PUBLISHED 0 0 0 0 3HN4 20624990 Crystal structure of the NK2 fragment (28-289) of human hepatocyte growth factor/scatter factor 2009-05-29 2010-06-09 Tolbert, W.D.,Daugherty-Holtrop, J.,Gherardi, E.,Vande Woude, G.,Xu, H.E. Structural basis for agonism and antagonism of hepatocyte growth factor. Proc.Natl.Acad.Sci.USA 2010 107 13264 13269 3HN4 20624990 Crystal structure of the NK2 fragment (28-289) of human hepatocyte growth factor/scatter factor 2009-05-29 2010-06-09 Tolbert, W.D.,Daugherty-Holtrop, J.,Gherardi, E.,Vande Woude, G.,Xu, H.E. Structural basis for agonism and antagonism of hepatocyte growth factor. Proc.Natl.Acad.Sci.USA 2010 107 13264 13269 3HN4 20624990 Crystal structure of the NK2 fragment (28-289) of human hepatocyte growth factor/scatter factor 2009-05-29 2010-06-09 Tolbert, W.D.,Daugherty-Holtrop, J.,Gherardi, E.,Vande Woude, G.,Xu, H.E. Structural basis for agonism and antagonism of hepatocyte growth factor. Proc.Natl.Acad.Sci.USA 2010 107 13264 13269 3I2K 20436035 Cocaine Esterase, wild type, bound to a DTT adduct 2009-06-29 2010-06-16 Narasimhan, D.,Nance, M.R.,Gao, D.,Ko, M.C.,Macdonald, J.,Tamburi, P.,Yoon, D.,Landry, D.M.,Woods, J.H.,Zhan, C.G.,Tesmer, J.J.,Sunahara, R.K. Structural analysis of thermostabilizing mutations of cocaine esterase. Protein Eng.Des.Sel. 2010 23 537 547 3MJG 20534510 The structure of a platelet derived growth factor receptor complex 2010-04-12 2010-06-16 Shim, A.H.,Liu, H.,Focia, P.J.,Chen, X.,Lin, P.C.,He, X. Structures of a platelet-derived growth factor/propeptide complex and a platelet-derived growth factor/receptor complex. Proc.Natl.Acad.Sci.USA 2010 107 11307 11312 3MJK 20534510 Structure of a growth factor precursor 2010-04-12 2010-06-16 Shim, A.H.,Liu, H.,Focia, P.J.,Chen, X.,Lin, P.C.,He, X. Structures of a platelet-derived growth factor/propeptide complex and a platelet-derived growth factor/receptor complex. Proc.Natl.Acad.Sci.USA 2010 107 11307 11312 3L4E 1.5A Crystal Structure of a Putative Peptidase E Protein from Listeria monocytogenes EGD-e 2009-12-19 2010-07-14 Brunzelle, J.S.,Onopriyenko, O.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.5A Crystal Structure of a Putative Peptidase E Protein from Listeria monocytogenes EGD-e To be Published 0 0 0 0 3L4E 1.5A Crystal Structure of a Putative Peptidase E Protein from Listeria monocytogenes EGD-e 2009-12-19 2010-07-14 Brunzelle, J.S.,Onopriyenko, O.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.5A Crystal Structure of a Putative Peptidase E Protein from Listeria monocytogenes EGD-e To be Published 0 0 0 0 3N08 Crystal Structure of a Putative PhosphatidylEthanolamine-Binding Protein (PEBP) Homolog CT736 from Chlamydia trachomatis D/UW-3/CX 2010-05-13 2010-07-14 Brunzelle, J.S.,Wawrzak, Z.,Onopriyenko, O.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.25 Angstrom Crystal Structure of a Putative PhosphatidylEthanolamine-Binding Protein (PEBP) Homolog CT736 from Chlamydia trachomatis D/UW-3/CX To be Published 0 0 0 0 3JVU 20595000 Crystal structure of unliganded P. aeruginosa PilT 2009-09-17 2010-07-21 Misic, A.M.,Satyshur, K.A.,Forest, K.T. P. aeruginosa PilT structures with and without nucleotide reveal a dynamic type IV pilus retraction motor. J.Mol.Biol. 2010 400 1011 1021 3M6I 20655316 L-arabinitol 4-dehydrogenase 2010-03-15 2010-07-21 Bae, B.,Sullivan, R.P.,Zhao, H.,Nair, S.K. Structure and engineering of L-arabinitol 4-dehydrogenase from Neurospora crassa J.Mol.Biol. 2010 402 230 240 3NCT 20659894 X-ray crystal structure of the bacterial conjugation factor PsiB, a negative regulator of reca 2010-06-05 2010-07-21 Petrova, V.,Satyshur, K.A.,George, N.P.,McCaslin, D.,Cox, M.M.,Keck, J.L. X-ray crystal structure of the bacterial conjugation factor PsiB, a negative regulator of RecA. J.Biol.Chem. 2010 285 30615 30621 3NVS 1.02 Angstrom resolution crystal structure of 3-phosphoshikimate 1-carboxyvinyltransferase from Vibrio cholerae in complex with shikimate-3-phosphate (partially photolyzed) and glyphosate 2010-07-08 2010-07-21 Minasov, G.,Light, S.H.,Halavaty, A.,Shuvalova, G.,Papazisi, L.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.02 Angstrom Resolution Crystal Structure of 3-Phosphoshikimate 1-Carboxyvinyltransferase from Vibrio cholerae in complex with Shikimate-3-Phosphate (Partially Photolyzed) and Glyphosate TO BE PUBLISHED 0 0 0 0 3M6K 20637419 Crystal Structure of N-terminal 44 kDa fragment of topoisomerase V in the presence of guanidium hydrochloride 2010-03-15 2010-08-04 Rajan, R.,Taneja, B.,Mondragon, A. Structures of minimal catalytic fragments of topoisomerase v reveals conformational changes relevant for DNA binding. 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Science 2010 329 1526 1530 3N39 20688982 Ribonucleotide Reductase Dimanganese(II)-NrdF from Escherichia coli in Complex with NrdI 2010-05-19 2010-08-18 Boal, A.K.,Cotruvo, J.A.,Stubbe, J.,Rosenzweig, A.C. Structural basis for activation of class Ib ribonucleotide reductase. Science 2010 329 1526 1530 3N3A 20688982 Ribonucleotide Reductase Dimanganese(II)-NrdF from Escherichia coli in Complex with Reduced NrdI 2010-05-19 2010-08-18 Boal, A.K.,Cotruvo, J.A.,Stubbe, J.,Rosenzweig, A.C. Structural basis for activation of class Ib ribonucleotide reductase. Science 2010 329 1526 1530 3N3B 20688982 Ribonucleotide Reductase Dimanganese(II)-NrdF from Escherichia coli in Complex with Reduced NrdI with a Trapped Peroxide 2010-05-19 2010-08-18 Boal, A.K.,Cotruvo, J.A.,Stubbe, J.,Rosenzweig, A.C. Structural basis for activation of class Ib ribonucleotide reductase. Science 2010 329 1526 1530 3NJO 20729860 X-ray crystal structure of the Pyr1-pyrabactin A complex 2010-06-17 2010-08-18 Peterson, F.C.,Burgie, E.S.,Park, S.Y.,Jensen, D.R.,Weiner, J.J.,Bingman, C.A.,Chang, C.E.,Cutler, S.R.,Phillips, G.N.,Volkman, B.F. Structural basis for selective activation of ABA receptors. Nat.Struct.Mol.Biol. 2010 17 1109 1113 3LTG 20723758 Crystal structure of the Drosophila Epidermal Growth Factor Receptor ectodomain complexed with a low affinity Spitz mutant 2010-02-15 2010-08-25 Alvarado, D.,Klein, D.E.,Lemmon, M.A. Structural basis for negative cooperativity in growth factor binding to an EGF receptor. Cell(Cambridge,Mass.) 2010 142 568 579 3NMH 20729862 Crystal structure of the abscisic receptor PYL2 in complex with pyrabactin 2010-06-22 2010-08-25 Melcher, K.,Xu, Y.,Ng, L.M.,Zhou, X.E.,Soon, F.F.,Chinnusamy, V.,Suino-Powell, K.M.,Kovach, A.,Tham, F.S.,Cutler, S.R.,Li, J.,Yong, E.L.,Zhu, J.K.,Xu, H.E. Identification and mechanism of ABA receptor antagonism. Nat.Struct.Mol.Biol. 2010 17 1102 1108 3NMN 20729862 Crystal structure of pyrabactin-bound abscisic acid receptor PYL1 in complex with type 2C protein phosphatase ABI1 2010-06-22 2010-08-25 Melcher, K.,Xu, Y.,Ng, L.M.,Zhou, X.E.,Soon, F.F.,Chinnusamy, V.,Suino-Powell, K.M.,Kovach, A.,Tham, F.S.,Cutler, S.R.,Li, J.,Yong, E.L.,Zhu, J.K.,Xu, H.E. Identification and mechanism of ABA receptor antagonism. Nat.Struct.Mol.Biol. 2010 17 1102 1108 3NMP 20729862 Crystal structure of the abscisic receptor PYL2 mutant A93F in complex with pyrabactin 2010-06-22 2010-08-25 Melcher, K.,Xu, Y.,Ng, L.M.,Zhou, X.E.,Soon, F.F.,Chinnusamy, V.,Suino-Powell, K.M.,Kovach, A.,Tham, F.S.,Cutler, S.R.,Li, J.,Yong, E.L.,Zhu, J.K.,Xu, H.E. Identification and mechanism of ABA receptor antagonism. 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Nat.Struct.Mol.Biol. 2010 17 1102 1108 3OEA 20739280 Crystal structure of the Q121E mutants of C.polysaccharolyticus CBM16-1 bound to cellopentaose 2010-08-12 2010-08-25 Su, X.,Agarwal, V.,Dodd, D.,Bae, B.,Mackie, R.I.,Nair, S.K.,Cann, I.K. Mutational insights into the roles of amino acid residues in ligand binding for two closely related family 16 carbohydrate binding modules. J.Biol.Chem. 2010 285 34665 34676 3OEB 20739280 Crystal structure of the Q121E mutant of C.polysaccharolyticus CBM16-1 bound to mannopentaose 2010-08-12 2010-08-25 Su, X.,Agarwal, V.,Dodd, D.,Bae, B.,Mackie, R.I.,Nair, S.K.,Cann, I.K. Mutational insights into the roles of amino acid residues in ligand binding for two closely related family 16 carbohydrate binding modules. J.Biol.Chem. 2010 285 34665 34676 3OET D-Erythronate-4-Phosphate Dehydrogenase complexed with NAD 2010-08-13 2010-08-25 Filippova, E.V.,Wawrzak, Z.,Onopriyenko, O.,Savchenko, A.,Edwards, A.,Anderson, W.F. 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Structural Basis of Semaphorin-Plexin Recognition and Viral Mimicry from Sema7A and A39R Complexes with PlexinC1. Cell(Cambridge,Mass.) 2010 142 749 761 3OOW Octameric structure of the phosphoribosylaminoimidazole carboxylase catalytic subunit from Francisella tularensis subsp. tularensis SCHU S4. 2010-08-31 2010-09-15 Filippova, E.V.,Wawrzak, Z.,Kudritska, M.,Edwards, A.,Savchenko, A.,Anderson, F.W. Octameric structure of the phosphoribosylaminoimidazole carboxylase catalytic subunit from Francisella tularensis subsp. tularensis SCHU S4. To be Published 0 0 0 0 2X6P 20825181 Crystal Structure of Coil Ser L19C 2010-02-18 2010-09-22 Chakraborty, S.,Touw, D.S.,Peacock, A.F.A.,Stuckey, J.A.,Pecoraro, V.L. Structural Comparisons of Apo- and Metalated Three-Stranded Coiled Coils Clarify Metal Binding Determinants in Thiolate Containing Designed Peptides. J.Am.Chem.Soc. 2010 132 13240 0 3JX7 20927102 Bacillus cereus alkylpurine DNA glycosylase AlkD bound to DNA containing a 3-METHYLADENINE analog 2009-09-18 2010-09-22 Rubinson, E.H.,Gowda, A.S.,Spratt, T.E.,Gold, B.,Eichman, B.F. An unprecedented nucleic acid capture mechanism for excision of DNA damage. Nature 2010 468 406 411 3JXZ 20927102 Bacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing an Abasic Site (across from T) 2009-09-21 2010-09-22 Rubinson, E.H.,Gowda, A.S.,Spratt, T.E.,Gold, B.,Eichman, B.F. An unprecedented nucleic acid capture mechanism for excision of DNA damage. Nature 2010 468 406 411 3JY1 20927102 Bacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing an Abasic Site (across from C) 2009-09-21 2010-09-22 Rubinson, E.H.,Gowda, A.S.,Spratt, T.E.,Gold, B.,Eichman, B.F. An unprecedented nucleic acid capture mechanism for excision of DNA damage. Nature 2010 468 406 411 3NBH 20826342 Crystal structure of human RMI1C-RMI2 complex 2010-06-03 2010-09-22 Wang, F.,Yang, Y.,Singh, T.R.,Busygina, V.,Guo, R.,Wan, K.,Wang, W.,Sung, P.,Meetei, A.R.,Lei, M. Crystal Structures of RMI1 and RMI2, Two OB-Fold Regulatory Subunits of the BLM Complex. Structure 2010 18 1159 1170 3NBI 20826342 Crystal structure of human RMI1 N-terminus 2010-06-03 2010-09-22 Wang, F.,Yang, Y.,Singh, T.R.,Busygina, V.,Guo, R.,Wan, K.,Wang, W.,Sung, P.,Meetei, A.R.,Lei, M. Crystal Structures of RMI1 and RMI2, Two OB-Fold Regulatory Subunits of the BLM Complex. Structure 2010 18 1159 1170 3OTR 25760592 2.75 Angstrom Crystal Structure of Enolase 1 from Toxoplasma gondii 2010-09-13 2010-09-22 Ruan, J.,Mouveaux, T.,Light, S.H.,Minasov, G.,Anderson, W.F.,Tomavo, S.,Ngo, H.M. The structure of bradyzoite-specific enolase from Toxoplasma gondii reveals insights into its dual cytoplasmic and nuclear functions. Acta Crystallogr.,Sect.D 2015 71 417 426 3K6G 21217703 Crystal structure of Rap1 and TRF2 complex 2009-10-08 2010-10-13 Chen, Y.,Rai, R.,Zhou, Z.R.,Kanoh, J.,Ribeyre, C.,Yang, Y.,Zheng, H.,Damay, P.,Wang, F.,Tsujii, H.,Hiraoka, Y.,Shore, D.,Hu, H.Y.,Chang, S.,Lei, M. A conserved motif within RAP1 has diversified roles in telomere protection and regulation in different organisms. Nat.Struct.Mol.Biol. 2011 18 213 221 3K6Y 20947023 Crystal structure of Rv3671c protease from M. tuberculosis, active form 2009-10-10 2010-10-13 Biswas, T.,Small, J.,Vandal, O.,Odaira, T.,Deng, H.,Ehrt, S.,Tsodikov, O.V. Structural insight into serine protease Rv3671c that Protects M. tuberculosis from oxidative and acidic stress. Structure 2010 18 1353 1363 3K6Z 20947023 Crystal structure of Rv3671c protease, inactive form 2009-10-10 2010-10-13 Biswas, T.,Small, J.,Vandal, O.,Odaira, T.,Deng, H.,Ehrt, S.,Tsodikov, O.V. 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J.Biol.Chem. 2010 285 40635 40644 3OXP Structure of phosphotransferase enzyme II, A component from Yersinia pestis CO92 at 1.2 A resolution 2010-09-21 2010-10-13 Filippova, E.V.,Wawrzak, Z.,Kudritska, M.,Edwards, A.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) Structure of phosphotransferase enzyme II, A component from Yersinia pestis CO92 at 1.2 A resolution To be Published 0 0 0 0 3N95 Crystal structure of human CRFR2 alpha extracellular domain in complex with Urocortin 2 2010-05-28 2010-10-20 Pal, K.,Swaminathan, K.,Pioszak, A.A.,Xu, H.E. Structural basis of ligand selectivity in human CRFR1 and CRFR2 alpha extracellular domain To be Published 0 0 0 0 3OSN 20961860 Structural Basis for Proficient Incorporation of dTTP Opposite O6-Methylguanine by Human DNA Polymerase Iota 2010-09-09 2010-10-20 Pence, M.G.,Choi, J.Y.,Egli, M.,Guengerich, F.P. 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J.Am.Chem.Soc. 2010 132 14942 14950 3OTH 21987796 Crystal Structure of CalG1, Calicheamicin Glycostyltransferase, TDP and calicheamicin alpha3I bound form 2010-09-11 2010-12-15 Chang, A.,Singh, S.,Helmich, K.E.,Goff, R.D.,Bingman, C.A.,Thorson, J.S.,Phillips, G.N. Complete set of glycosyltransferase structures in the calicheamicin biosynthetic pathway reveals the origin of regiospecificity. Proc.Natl.Acad.Sci.USA 2011 108 17649 17654 3OTI 21987796 Crystal Structure of CalG3, Calicheamicin Glycostyltransferase, TDP and calicheamicin T0 bound form 2010-09-11 2010-12-15 Chang, A.,Singh, S.,Helmich, K.E.,Goff, R.D.,Bingman, C.A.,Thorson, J.S.,Phillips, G.N. Complete set of glycosyltransferase structures in the calicheamicin biosynthetic pathway reveals the origin of regiospecificity. 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Nat.Struct.Mol.Biol. 2011 18 213 221 3OYT 1.84 Angstrom resolution crystal structure of 3-oxoacyl-(acyl carrier protein) synthase I (fabB) from Yersinia pestis CO92 2010-09-23 2011-01-12 Halavaty, A.S.,Wawrzak, Z.,Onopriyenko, O.,Peterson, S.,Savchenko, A.,Anderson, W.F. 1.84 Angstrom resolution crystal structure of 3-oxoacyl-(acyl carrier protein) synthase I (fabB) from Yersinia pestis CO92 To be Published 0 0 0 0 3PKP 21317292 Q83S Variant of S. Enterica RmlA with dATP 2010-11-11 2011-01-12 Moretti, R.,Chang, A.,Peltier-Pain, P.,Bingman, C.A.,Phillips, G.N.,Thorson, J.S. Expanding the Nucleotide and Sugar 1-Phosphate Promiscuity of Nucleotidyltransferase RmlA via Directed Evolution. J.Biol.Chem. 2011 286 13235 13243 3PKQ 21317292 Q83D Variant of S. Enterica RmlA with dGTP 2010-11-11 2011-01-12 Moretti, R.,Chang, A.,Peltier-Pain, P.,Bingman, C.A.,Phillips, G.N.,Thorson, J.S. Expanding the Nucleotide and Sugar 1-Phosphate Promiscuity of Nucleotidyltransferase RmlA via Directed Evolution. J.Biol.Chem. 2011 286 13235 13243 3PP9 1.6 Angstrom resolution crystal structure of putative streptothricin acetyltransferase from Bacillus anthracis str. Ames in complex with acetyl coenzyme A 2010-11-24 2011-01-12 Halavaty, A.S.,Wawrzak, Z.,Onopriyenko, O.,Edwards, A.,Savchenko, A.,Peterson, S.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.6 Angstrom resolution crystal structure of putative streptothricin acetyltransferase from Bacillus anthracis str. Ames in complex with acetyl coenzyme A To be Published 0 0 0 0 3Q58 Structure of N-acetylmannosamine-6-Phosphate Epimerase from Salmonella enterica 2010-12-27 2011-01-12 0 0 0 0 3Q7H Structure of the ClpP subunit of the ATP-dependent Clp Protease from Coxiella burnetii 2011-01-04 2011-01-12 Anderson, S.M.,Wawrzak, Z.,Gordon, E.,Hasseman, J.,Anderson, W.F.,Savchenko, A.,Center for Structural Genomics of Infectious Diseases (CSGID) Structure of the ClpP subunit of the ATP-dependent Clp Protease from Coxiella burnetii To be Published 0 0 0 0 3PAE 21215758 Crystal structure of the K84D mutant of OXA-24/40 in complex with doripenem 2010-10-19 2011-01-19 Schneider, K.D.,Ortega, C.J.,Renck, N.A.,Bonomo, R.A.,Powers, R.A.,Leonard, D.A. Structures of the Class D Carbapenemase OXA-24 from Acinetobacter baumannii in Complex with Doripenem. J.Mol.Biol. 2011 406 583 594 3PAG 21215758 Crystal structure of the V130D mutant of OXA-24/40 in complex with doripenem 2010-10-19 2011-01-19 Schneider, K.D.,Ortega, C.J.,Renck, N.A.,Bonomo, R.A.,Powers, R.A.,Leonard, D.A. Structures of the Class D Carbapenemase OXA-24 from Acinetobacter baumannii in Complex with Doripenem. J.Mol.Biol. 2011 406 583 594 3PRM 21228232 Structural analysis of a viral OTU domain protease from the Crimean-Congo Hemorrhagic Fever virus in complex with human ubiquitin 2010-11-30 2011-01-26 Capodagli, G.C.,McKercher, M.A.,Baker, E.A.,Masters, E.M.,Brunzelle, J.S.,Pegan, S.D. Structural analysis of a viral ovarian tumor domain protease from the crimean-congo hemorrhagic Fever virus in complex with covalently bonded ubiquitin. J.Virol. 2011 85 3621 3630 3M86 20951777 Crystal structure of the cysteine protease inhibitor, EhICP2, from Entamoeba histolytica 2010-03-17 2011-02-02 Casados-Vazquez, L.E.,Lara-Gonzalez, S.,Brieba, L.G. Crystal structure of the cysteine protease inhibitor 2 from Entamoeba histolytica: functional convergence of a common protein fold. Gene 2011 471 45 52 3M88 20951777 Crystal structure of the cysteine protease inhibitor, EhICP2, from Entamoeba histolytica 2010-03-17 2011-02-02 Casados-Vazquez, L.E.,Lara-Gonzalez, S.,Brieba, L.G. Crystal structure of the cysteine protease inhibitor 2 from Entamoeba histolytica: functional convergence of a common protein fold. Gene 2011 471 45 52 3OF5 Crystal Structure of a Dethiobiotin Synthetase from Francisella tularensis subsp. tularensis SCHU S4 2010-08-13 2011-02-02 Brunzelle, J.S.,Skarina, T.,Gordon, E.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases Crystal Structure of a Dethiobiotin Synthetase from Francisella tularensis subsp. tularensis SCHU S4 TO BE PUBLISHED 0 0 0 0 3MXL 20866105 Crystal structure of nitrososynthase from Micromonospora carbonacea var. africana 2010-05-07 2011-02-09 Vey, J.L.,Al-Mestarihi, A.,Hu, Y.,Funk, M.A.,Bachmann, B.O.,Iverson, T.M. Structure and mechanism of ORF36, an amino sugar oxidizing enzyme in everninomicin biosynthesis . Biochemistry 2010 49 9306 9317 3QM3 1.85 Angstrom Resolution Crystal Structure of Fructose-bisphosphate Aldolase (Fba) from Campylobacter jejuni 2011-02-03 2011-02-23 Minasov, G.,Wawrzak, Z.,Skarina, T.,Onopriyenko, O.,Papazisi, L.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.85 Angstrom Resolution Crystal Structure of Fructose-bisphosphate Aldolase (Fba) from Campylobacter jejuni TO BE PUBLISHED 0 0 0 0 3PGF 21378967 Crystal structure of maltose bound MBP with a conformationally specific synthetic antigen binder (sAB) 2010-11-01 2011-03-09 Rizk, S.S.,Paduch, M.,Heithaus, J.H.,Duguid, E.M.,Sandstrom, A.,Kossiakoff, A.A. Allosteric control of ligand-binding affinity using engineered conformation-specific effector proteins. Nat.Struct.Mol.Biol. 2011 18 437 442 3QCX 21341675 Phosphoinositide-Dependent Kinase-1 (PDK1) kinase domain with 6-{2-Amino-6-[(3R)-3-methyl-4-morpholinyl]-4-pyrimidinyl}-1H-indazol-3-amine 2011-01-17 2011-03-09 Medina, J.R.,Becker, C.J.,Blackledge, C.W.,Duquenne, C.,Feng, Y.,Grant, S.W.,Heerding, D.,Li, W.H.,Miller, W.H.,Romeril, S.P.,Scherzer, D.,Shu, A.,Bobko, M.A.,Chadderton, A.R.,Dumble, M.,Gardiner, C.M.,Gilbert, S.,Liu, Q.,Rabindran, S.K.,Sudakin, V.,Xiang, H.,Brady, P.G.,Campobasso, N.,Ward, P.,Axten, J.M. Structure-Based Design of Potent and Selective 3-Phosphoinositide-Dependent Kinase-1 (PDK1) Inhibitors. J.Med.Chem. 2011 54 1871 1895 3O85 21366326 Giardia lamblia 15.5kD RNA binding protein 2010-08-02 2011-03-16 Biswas, S.,Buhrman, G.,Gagnon, K.,Mattos, C.,Brown, B.A.,Maxwell, E.S. Comparative analysis of the 15.5kD box C/D snoRNP core protein in the primitive eukaryote Giardia lamblia reveals unique structural and functional features. Biochemistry 2011 50 2907 2918 3NZ4 21361343 Crystal Structure of a Taxus Phenylalanine Aminomutase 2010-07-16 2011-03-23 Feng, L.,Wanninayake, U.,Strom, S.,Geiger, J.,Walker, K.D. Mechanistic, mutational, and structural evaluation of a taxus phenylalanine aminomutase. Biochemistry 2011 50 2919 2930 3R2I Crystal Structure of Superantigen-like Protein, Exotoxin SACOL0473 from Staphylococcus aureus subsp. aureus COL 2011-03-14 2011-03-23 Filippova, E.V.,Minasov, G.,Halavaty, A.,Shuvalova, L.,Winsor, J.,Dubrovska, I.,Kiryukhina, O.,Bagnoli, F.,Falugi, F.,Bottomley, M.,Grandi, G.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) Crystal Structure of Superantigen-like Protein, Exotoxin SACOL0473 from Staphylococcus aureus subsp. aureus COL TO BE PUBLISHED 0 0 0 0 3OTS 21394574 MDR769 HIV-1 protease complexed with MA/CA hepta-peptide 2010-09-13 2011-03-30 Liu, Z.,Wang, Y.,Brunzelle, J.,Kovari, I.A.,Kovari, L.C. Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease. Protein J. 2011 30 173 183 3OTY 21394574 MDR769 HIV-1 protease complexed with RT/RH hepta-peptide 2010-09-14 2011-03-30 Liu, Z.,Wang, Y.,Brunzelle, J.,Kovari, I.A.,Kovari, L.C. Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease. Protein J. 2011 30 173 183 3OU1 21394574 MDR769 HIV-1 protease complexed with RH/IN hepta-peptide 2010-09-14 2011-03-30 Liu, Z.,Wang, Y.,Brunzelle, J.,Kovari, I.A.,Kovari, L.C. Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease. Protein J. 2011 30 173 183 3OU3 21394574 MDR769 HIV-1 protease complexed with PR/RT hepta-peptide 2010-09-14 2011-03-30 Liu, Z.,Wang, Y.,Brunzelle, J.,Kovari, I.A.,Kovari, L.C. Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease. Protein J. 2011 30 173 183 3OU4 21394574 MDR769 HIV-1 protease complexed with TF/PR hepta-peptide 2010-09-14 2011-03-30 Liu, Z.,Wang, Y.,Brunzelle, J.,Kovari, I.A.,Kovari, L.C. Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease. Protein J. 2011 30 173 183 3OUA 21394574 MDR769 HIV-1 protease complexed with p1/p6 hepta-peptide 2010-09-14 2011-03-30 Liu, Z.,Wang, Y.,Brunzelle, J.,Kovari, I.A.,Kovari, L.C. Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease. Protein J. 2011 30 173 183 3OUB 21394574 MDR769 HIV-1 protease complexed with NC/p1 hepta-peptide 2010-09-14 2011-03-30 Liu, Z.,Wang, Y.,Brunzelle, J.,Kovari, I.A.,Kovari, L.C. Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease. Protein J. 2011 30 173 183 3OUC 21394574 MDR769 HIV-1 protease complexed with p2/NC hepta-peptide 2010-09-14 2011-03-30 Liu, Z.,Wang, Y.,Brunzelle, J.,Kovari, I.A.,Kovari, L.C. Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease. Protein J. 2011 30 173 183 3OUD 21394574 MDR769 HIV-1 protease complexed with CA/p2 hepta-peptide 2010-09-14 2011-03-30 Liu, Z.,Wang, Y.,Brunzelle, J.,Kovari, I.A.,Kovari, L.C. Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease. Protein J. 2011 30 173 183 3P42 21449614 Structure of GfcC (YmcB), protein encoded by the E. coli group 4 capsule operon 2010-10-05 2011-04-06 Sathiyamoorthy, K.,Mills, E.,Franzmann, T.M.,Rosenshine, I.,Saper, M.A. The Crystal Structure of Escherichia coli Group 4 Capsule Protein GfcC Reveals a Domain Organization Resembling That of Wza. Biochemistry 2011 50 5465 5476 3R95 21507941 Crystal structure of Microcin C7 self immunity acetyltransferase MccE in complex with Acetyl-CoA 2011-03-24 2011-04-20 Agarwal, V.,Metlitskaya, A.,Severinov, K.,Nair, S.K. Structural Basis for Microcin C7 Inactivation by the MccE Acetyltransferase. J.Biol.Chem. 2011 286 21295 21303 3R96 21507941 Crystal structure of Microcin C7 self immunity acetyltransferase MccE in complex with Acetyl-CoA and AMP 2011-03-24 2011-04-20 Agarwal, V.,Metlitskaya, A.,Severinov, K.,Nair, S.K. Structural Basis for Microcin C7 Inactivation by the MccE Acetyltransferase. J.Biol.Chem. 2011 286 21295 21303 3R9E 21507941 Crystal structure of Microcin C7 self immunity acetyltransferase MccE in complex with coenzyme A and aspartyl sulfamoyl adenosine (DSA) 2011-03-25 2011-04-20 Agarwal, V.,Metlitskaya, A.,Severinov, K.,Nair, S.K. Structural Basis for Microcin C7 Inactivation by the MccE Acetyltransferase. J.Biol.Chem. 2011 286 21295 21303 3R9F 21507941 Crystal structure of Microcin C7 self immunity acetyltransferase MccE in complex with Coenzyme A and Glutamyl sulfamoyl adenosine (ESA) 2011-03-25 2011-04-20 Agarwal, V.,Metlitskaya, A.,Severinov, K.,Nair, S.K. Structural Basis for Microcin C7 Inactivation by the MccE Acetyltransferase. J.Biol.Chem. 2011 286 21295 21303 3R9G 21507941 Crystal structure of Microcin C7 self immunity acetyltransferase MccE in complex with Coenzyme A and processed Microcin C7 antibiotic 2011-03-25 2011-04-27 Agarwal, V.,Metlitskaya, A.,Severinov, K.,Nair, S.K. Structural Basis for Microcin C7 Inactivation by the MccE Acetyltransferase. J.Biol.Chem. 2011 286 21295 21303 3QPT 21550983 Crystal structure of the Salmonella transcriptional regulator SlyA 2011-02-14 2011-05-04 Dolan, K.T.,Duguid, E.M.,He, C. Crystal Structures of SlyA Protein, a Master Virulence Regulator of Salmonella, in Free and DNA-bound States. J.Biol.Chem. 2011 286 22178 22185 3RO6 22392983 Crystal structure of Dipeptide Epimerase from Methylococcus capsulatus complexed with Mg ion 2011-04-25 2011-05-11 Lukk, T.,Sakai, A.,Kalyanaraman, C.,Brown, S.D.,Imker, H.J.,Song, L.,Fedorov, A.A.,Fedorov, E.V.,Toro, R.,Hillerich, B.,Seidel, R.,Patskovsky, Y.,Vetting, M.W.,Nair, S.K.,Babbitt, P.C.,Almo, S.C.,Gerlt, J.A.,Jacobson, M.P. Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily. Proc.Natl.Acad.Sci.USA 2012 109 4122 4127 3PVP 21620858 Structure of Mycobacterium tuberculosis DnaA-DBD in complex with box2 DNA 2010-12-07 2011-05-25 Tsodikov, O.V.,Biswas, T. Structural and Thermodynamic Signatures of DNA Recognition by Mycobacterium tuberculosis DnaA. J.Mol.Biol. 2011 410 461 476 3PVV 21620858 Structure of Mycobacterium tuberculosis DnaA-DBD in complex with box1 DNA 2010-12-07 2011-05-25 Tsodikov, O.V.,Biswas, T. Structural and Thermodynamic Signatures of DNA Recognition by Mycobacterium tuberculosis DnaA. J.Mol.Biol. 2011 410 461 476 3QHW 21565702 Structure of a pCDK2/CyclinA transition-state mimic 2011-01-26 2011-05-25 Bao, Z.Q.,Jacobsen, D.M.,Young, M.A. Briefly Bound to Activate: Transient Binding of a Second Catalytic Magnesium Activates the Structure and Dynamics of CDK2 Kinase for Catalysis. Structure 2011 19 675 690 3RYK 29199987 1.63 Angstrom resolution crystal structure of dTDP-4-dehydrorhamnose 3,5-epimerase (rfbC) from Bacillus anthracis str. Ames with TDP and PPi bound 2011-05-11 2011-05-25 Shornikov, A.,Tran, H.,Macias, J.,Halavaty, A.S.,Minasov, G.,Anderson, W.F.,Kuhn, M.L. Structure of the Bacillus anthracis dTDP-L-rhamnose-biosynthetic enzyme dTDP-4-dehydrorhamnose 3,5-epimerase (RfbC). Acta Crystallogr F Struct Biol 2017 73 664 671 3P91 21636889 Crystal structure of Proliferating Cellular Nuclear Antigen from Entamoeba histolytica 2010-10-15 2011-06-01 Cardona-Felix, C.S.,Lara-Gonzalez, S.,Brieba, L.G. Structure and biochemical characterization of proliferating cellular nuclear antigen from a parasitic protozoon. Acta Crystallogr.,Sect.D 2011 67 497 505 3R1K 21628583 Crystal structure of acetyltransferase Eis from Mycobacterium tuberculosis H37Rv in complex with CoA and an acetamide moiety 2011-03-10 2011-06-01 Chen, W.,Biswas, T.,Porter, V.R.,Tsodikov, O.V.,Garneau-Tsodikova, S. Unusual regioversatility of acetyltransferase Eis, a cause of drug resistance in XDR-TB. Proc.Natl.Acad.Sci.USA 2011 108 9804 9808 3QCW 21620716 Structure of neurexin 1 alpha (domains LNS1-LNS6), no splice inserts 2011-01-17 2011-06-15 Chen, F.,Venugopal, V.,Murray, B.,Rudenko, G. The Structure of Neurexin 1 alpha Reveals Features Promoting a Role as Synaptic Organizer Structure 2011 19 779 789 3R05 21620716 Structure of neurexin 1 alpha (domains LNS1-LNS6), with splice insert SS3 2011-03-07 2011-06-15 Chen, F.,Venugopal, V.,Murray, B.,Rudenko, G. The structure of neurexin 1α reveals features promoting a role as synaptic organizer Structure 2011 19 779 789 3SC6 29199984 2.65 Angstrom resolution crystal structure of dTDP-4-dehydrorhamnose reductase (rfbD) from Bacillus anthracis str. Ames in complex with NADP 2011-06-07 2011-06-22 Law, A.,Stergioulis, A.,Halavaty, A.S.,Minasov, G.,Anderson, W.F.,Kuhn, M.L. Structure of the Bacillus anthracis dTDP-L-rhamnose-biosynthetic enzyme dTDP-4-dehydrorhamnose reductase (RfbD). Acta Crystallogr F Struct Biol 2017 73 644 650 3QWV 21738746 Crystal structure of histone lysine methyltransferase SmyD2 in complex with the cofactor product AdoHcy 2011-02-28 2011-07-06 Jiang, Y.,Sirinupong, N.,Brunzelle, J.,Yang, Z. Crystal structures of histone and p53 methyltransferase SmyD2 reveal a conformational flexibility of the autoinhibitory C-terminal domain. Plos One 2011 6 0 0 3QWW 21738746 Crystal structure of histone lysine methyltransferase SmyD2 in complex with the methyltransferase inhibitor sinefungin 2011-02-28 2011-07-06 Jiang, Y.,Sirinupong, N.,Brunzelle, J.,Yang, Z. Crystal structures of histone and p53 methyltransferase SmyD2 reveal a conformational flexibility of the autoinhibitory C-terminal domain. Plos One 2011 6 0 0 3SB1 Hydrogenase expression protein HupH from Thiobacillus denitrificans ATCC 25259 2011-06-03 2011-07-06 Filippova, E.V.,Minasov, G.,Shuvalova, L.,Kiryukhina, O.,Ruan, J.,Leo, R.D.,Joachimiak, A.,Anderson, W.F.,Midwest Center for Structural Genomics (MCSG) Hydrogenase expression protein HupH from Thiobacillus denitrificans ATCC 25259 To be Published 0 0 0 0 3NWL The crystal structure of the P212121 form of bovine liver catalase previously characterized by electron microscopy 2010-07-09 2011-07-13 Foroughi, L.M.,Kang, Y.N.,Matzger, A.J. Polymer-Induced Heteronucleation for Protein Single Crystal Growth: Structural Elucidation of Bovine Liver Catalase and Concanavalin A Forms Cryst.Growth Des. 2011 11 1294 1298 3RZZ 21711001 Structure of Hydroxyethylphoshphonate Dioxygenase Y98F Mutant 2011-05-12 2011-07-20 Peck, S.C.,Cooke, H.A.,Cicchillo, R.M.,Malova, P.,Hammerschmidt, F.,Nair, S.K.,van der Donk, W.A. Mechanism and substrate recognition of 2-hydroxyethylphosphonate dioxygenase. Biochemistry 2011 50 6598 6605 3SLH 1.70 Angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (AroA) from Coxiella burnetii in complex with shikimate-3-phosphate and glyphosate 2011-06-24 2011-07-20 Light, S.H.,Minasov, G.,Filippova, E.V.,Krishna, S.N.,Shuvalova, L.,Papazisi, L.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.70 Angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase(AroA) from Coxiella burnetii in complex with shikimate-3-phosphate and glyphosate To be Published 0 0 0 0 3IA9 Crystal structure of a chemically synthesized [D25N]HIV-1 protease molecule complexed with MVT-101 reduced isostere inhibitor 2009-07-13 2011-07-27 Torbeev, V.Y.,Kent, S.B.H. Hydrogen bonds at the protein-inhibitor interface in the HIV-1 protease / inhibitors complexes probed by total chemical synthesis and X-ray crystallography To be Published 0 0 0 0 3RRB 22940582 Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima in complex with AMP 2011-04-29 2011-07-27 Shumilin, I.A.,Cymborowski, M.,Chertihin, O.,Jha, K.N.,Herr, J.C.,Lesley, S.A.,Joachimiak, A.,Minor, W. Identification of unknown protein function using metabolite cocktail screening. Structure 2012 20 1715 1725 3O2N X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 2010-07-22 2011-08-03 Sturdy, M. X-ray Crystallographic Structure Activity Relationship (SAR) of Casimiroin and its Analogs Bound to Human Quinone Reductase 2 To be Published 0 0 0 0 3SZY 22035792 Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in APO form 2011-07-19 2011-08-03 Agarwal, V.,Borisova, S.A.,Metcalf, W.W.,van der Donk, W.A.,Nair, S.K. Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase. Chem.Biol. 2011 18 1230 1240 3SZZ 22035792 Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with Acetate 2011-07-19 2011-08-03 Agarwal, V.,Borisova, S.A.,Metcalf, W.W.,van der Donk, W.A.,Nair, S.K. Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase. Chem.Biol. 2011 18 1230 1240 3T00 22035792 Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with vanadate 2011-07-19 2011-08-03 Agarwal, V.,Borisova, S.A.,Metcalf, W.W.,van der Donk, W.A.,Nair, S.K. Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase. Chem.Biol. 2011 18 1230 1240 3T01 22035792 Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with Phosphonoformate 2011-07-19 2011-08-03 Agarwal, V.,Borisova, S.A.,Metcalf, W.W.,van der Donk, W.A.,Nair, S.K. Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase. Chem.Biol. 2011 18 1230 1240 3T02 22035792 Crystal Structure of Phosphonoacetate hydrolase from Sinorhizobium meliloti 1021 in complex with Phosphonoacetate 2011-07-19 2011-08-03 Agarwal, V.,Borisova, S.A.,Metcalf, W.W.,van der Donk, W.A.,Nair, S.K. Structural and mechanistic insights into C-p bond hydrolysis by phosphonoacetate hydrolase. Chem.Biol. 2011 18 1230 1240 3RSC 21987796 Crystal Structure of CalG2, Calicheamicin Glycosyltransferase, TDP and calicheamicin T0 bound form 2011-05-02 2011-08-10 Chang, A.,Singh, S.,Helmich, K.E.,Goff, R.D.,Bingman, C.A.,Thorson, J.S.,Phillips, G.N. Complete set of glycosyltransferase structures in the calicheamicin biosynthetic pathway reveals the origin of regiospecificity. Proc.Natl.Acad.Sci.USA 2011 108 17649 17654 3T32 Crystal structure of a putative C-S lyase from Bacillus anthracis 2011-07-24 2011-08-10 Anderson, S.M.,Wawrzak, Z.,Gordon, E.,Peterson, S.N.,Porebski, P.,Minor, W.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) Crystal structure of a putative C-S lyase from Bacillus anthracis TO BE PUBLISHED 0 0 0 0 3T4X Short chain dehydrogenase/reductase family oxidoreductase from Bacillus anthracis str. Ames Ancestor 2011-07-26 2011-08-17 Filippova, E.V.,Wawrzak, Z.,Skarina, T.,Edwards, A.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) Short chain dehydrogenase/reductase family oxidoreductase from Bacillus anthracis str. 'Ames Ancestor' To be Published 0 0 0 0 3S27 21865170 The crystal structure of sucrose synthase-1 from Arabidopsis thaliana and its functional implications. 2011-05-16 2011-08-24 Zheng, Y.,Anderson, S.,Zhang, Y.,Garavito, R.M. The Structure of Sucrose Synthase-1 from Arabidopsis thaliana and Its Functional Implications. J.Biol.Chem. 2011 286 36108 36118 3SMA 21865168 A new N-acetyltransferase fold in the structure and mechanism of the phosphonate biosynthetic enzyme FrbF 2011-06-27 2011-08-24 Bae, B.,Cobb, R.E.,Desieno, M.A.,Zhao, H.,Nair, S.K. New N-Acetyltransferase Fold in the Structure and Mechanism of the Phosphonate Biosynthetic Enzyme FrbF. J.Biol.Chem. 2011 286 36132 36141 3T1E 21873198 The structure of the Newcastle disease virus hemagglutinin-neuraminidase (HN) ectodomain reveals a 4-helix bundle stalk 2011-07-21 2011-09-07 Yuan, P.,Swanson, K.A.,Leser, G.P.,Paterson, R.G.,Lamb, R.A.,Jardetzky, T.S. Structure of the Newcastle disease virus hemagglutinin-neuraminidase (HN) ectodomain reveals a four-helix bundle stalk. Proc.Natl.Acad.Sci.USA 2011 108 14920 14925 3PUH 21890748 Cocaine Esterase, wild-type biologically active dimer 2010-12-04 2011-09-21 Narasimhan, D.,Collins, G.T.,Nance, M.R.,Nichols, J.,Edwald, E.,Chan, J.,Ko, M.C.,Woods, J.H.,Tesmer, J.J.,Sunahara, R.K. Subunit stabilization and polyethylene glycolation of cocaine esterase improves in vivo residence time. Mol.Pharmacol. 2011 80 1056 1065 3SXU 21857649 Structure of the E. coli SSB-DNA polymerase III interface 2011-07-15 2011-09-21 Marceau, A.H.,Bahng, S.,Massoni, S.C.,George, N.P.,Sandler, S.J.,Marians, K.J.,Keck, J.L. Structure of the SSB-DNA polymerase III interface and its role in DNA replication. Embo J. 2011 30 4236 4247 3TOS Crystal Structure of CalS11, Calicheamicin Methyltransferase 2011-09-06 2011-10-05 Chang, A.,Aceti, D.J.,Beebe, E.T.,Makino, S.-I.,Wrobel, R.L.,Bingman, C.A.,Thorson, J.S.,Phillips Jr., G.N. Crystal Structure of CalS11, Calicheamicin methyltransferase To be Published 0 0 0 0 3SO9 21871444 Darunavir in Complex with a Human Immunodeficiency Virus Type 1 Protease Variant 2011-06-30 2011-10-12 Wang, Y.,Liu, Z.,Brunzelle, J.S.,Kovari, I.A.,Dewdney, T.G.,Reiter, S.J.,Kovari, L.C. The higher barrier of darunavir and tipranavir resistance for HIV-1 protease. Biochem.Biophys.Res.Commun. 2011 412 737 742 3SPK 21871444 Tipranavir in Complex with a Human Immunodeficiency Virus Type 1 Protease Variant 2011-07-01 2011-10-12 Wang, Y.,Liu, Z.,Brunzelle, J.S.,Kovari, I.A.,Dewdney, T.G.,Reiter, S.J.,Kovari, L.C. The higher barrier of darunavir and tipranavir resistance for HIV-1 protease. 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Molecular basis for phosphospecific recognition of histone H3 tails by Survivin paralogues at inner centromeres. Mol Biol Cell 2012 23 1457 1466 4DWJ Crystal structure of Thymidylate Kinase from Staphylococcus aureus in complex with Thymidine Monophosphate 2012-02-24 2012-03-07 Filippova, E.V.,Minasov, G.,Shuvalova, L.,Kiryukhina, O.,Jedrzejczak, R.,Joachimiak, A.,Anderson, W.F.,Midwest Center for Structural Genomics (MCSG) Crystal structure of Thymidylate Kinase from Staphylococcus aureus in complex with Thymidine Monophosphate To be Published 0 0 0 0 3R2Q Crystal Structure Analysis of yibF from E. Coli 2011-03-14 2012-03-14 Ladner, J.E.,Stournan, N.V.,Branch, M.C.,Harp, J.,Schaab, M.,Brown, D.W.,Armstrong, R.N. Structural and Functional Genomics of YibF, a Glutathione Transferase Homologue from Escherichia coli to be published 0 0 0 0 3VDY 22373918 B. subtilis SsbB/ssDNA 2012-01-06 2012-03-14 Yadav, T.,Carrasco, B.,Myers, A.R.,George, N.P.,Keck, J.L.,Alonso, J.C. Genetic recombination in Bacillus subtilis: a division of labor between two single-strand DNA-binding proteins. Nucleic Acids Res. 2012 40 5546 5559 4DXE 2.52 Angstrom resolution crystal structure of the acyl-carrier-protein synthase (AcpS)-acyl carrier protein (ACP) protein-protein complex from Staphylococcus aureus subsp. aureus COL 2012-02-27 2012-03-14 Halavaty, A.S.,Minasov, G.,Filippova, E.V.,Dubrovska, I.,Winsor, J.,Shuvalova, L.,Peterson, S.N.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 2.52 Angstrom resolution crystal structure of the acyl-carrier-protein synthase (AcpS)-acyl carrier protein (ACP) protein-protein complex from Staphylococcus aureus subsp. aureus COL To be Published 0 0 0 0 4E1L Crystal structure of Acetoacetyl-CoA thiolase (thlA2) from Clostridium difficile 2012-03-06 2012-03-21 0 0 0 0 4ECD 2.5 Angstrom Resolution Crystal Structure of Bifidobacterium longum Chorismate Synthase 2012-03-26 2012-04-04 Light, S.H.,Minasov, G.,Krishna, S.N.,Shuvalova, L.,Kwon, K.,Lavie, A.,Anderson, W.F. 2.5 Angstrom Resolution Crystal Structure of Bifidobacterium longum Chorismate Synthase TO BE PUBLISHED 0 0 0 0 4DR0 22443445 Crystal structure of Bacillus subtilis dimanganese(II) NrdF 2012-02-16 2012-04-11 Boal, A.K.,Cotruvo, J.A.,Stubbe, J.,Rosenzweig, A.C. The Dimanganese(II) Site of Bacillus subtilis Class Ib Ribonucleotide Reductase. Biochemistry 2012 51 3861 3871 4EGD 1.85 Angstrom crystal structure of native hypothetical protein SAOUHSC_02783 from Staphylococcus aureus 2012-03-30 2012-04-11 Biancucci, M.,Minasov, G.,Halavaty, A.,Filippova, E.V.,Shuvalova, L.,Dubrovska, I.,Winsor, J.,Bagnoli, F.,Falugi, F.,Bottomley, M.,Grandi, G.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.85 Angstrom crystal structure of native hypothetical protein SAOUHSC_02783 from Staphylococcus aureus TO BE PUBLISHED 0 0 0 0 3RDE 22795085 Crystal structure of the catalytic domain of porcine leukocyte 12-lipoxygenase 2011-04-01 2012-04-18 Xu, S.,Mueser, T.C.,Marnett, L.J.,Funk, M.O. Crystal structure of 12-lipoxygenase catalytic-domain-inhibitor complex identifies a substrate-binding channel for catalysis. Structure 2012 20 1490 1497 3UVV 22474364 Crystal Structure of the ligand binding domains of the thyroid receptor:retinoid X receptor complexed with 3,3',5 triiodo-L-thyronine and 9-cis retinoic acid 2011-11-30 2012-04-18 Putcha, B.D.,Wright, E.,Brunzelle, J.S.,Fernandez, E.J. Structural basis for negative cooperativity within agonist-bound TR:RXR heterodimers. Proc.Natl.Acad.Sci.USA 2012 109 6084 6087 4EGU 0.95A Resolution Structure of a Histidine Triad Protein from Clostridium difficile 2012-04-01 2012-04-18 Anderson, S.M.,Wawrzak, Z.,Kudritska, M.,Peterson, S.N.,Anderson, W.F.,Savchenko, A. 0.95A Resolution Structure of a Histidine Triad Protein from Clostridium difficile To be Published 0 0 0 0 4EIT Crystal structure of an enoyl-(acyl carrier protein) reductase from Bartonella henselae 2012-04-05 2012-04-18 Edwards, T.E.,Craig, T.K.,Seattle Structural Genomics Center for Infectious Disease (SSGCID) Crystal structure of an enoyl-(acyl carrier protein) reductase from Bartonella henselae To be Published 0 0 0 0 3V6H 22488769 Replication of N2,3-Ethenoguanine by DNA Polymerases 2011-12-19 2012-04-25 Zhao, L.,Christov, P.P.,Kozekov, I.D.,Pence, M.G.,Pallan, P.S.,Rizzo, C.J.,Egli, M.,Guengerich, F.P. Replication of n(2) ,3-ethenoguanine by DNA polymerases. 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TO BE PUBLISHED 0 0 0 0 4EQE 22329685 Crystal structure of histidine triad nucleotide-binding protein 1 (HINT1) from human complexed with Lys-AMS 2012-04-18 2012-05-02 Wang, J.,Fang, P.,Schimmel, P.,Guo, M. Side chain independent recognition of aminoacyl adenylates by the hint1 transcription suppressor. J.Phys.Chem.B 2012 116 6798 6805 3RJ6 27646786 Crystal Structure of Horse heart ferric myoglobin; K45E/K63E/K96E mutant 2011-04-15 2012-05-09 Trana, E.N.,Nocek, J.M.,Woude, J.V.,Span, I.,Smith, S.M.,Rosenzweig, A.C.,Hoffman, B.M. Charge-Disproportionation Symmetry Breaking Creates a Heterodimeric Myoglobin Complex with Enhanced Affinity and Rapid Intracomplex Electron Transfer. J.Am.Chem.Soc. 2016 138 12615 12628 3RNO 22940582 Crystal Structure of Mouse Apolipoprotein A-I Binding Protein in Complex with NADP. 2011-04-22 2012-05-09 Shumilin, I.A.,Cymborowski, M.,Chertihin, O.,Jha, K.N.,Herr, J.C.,Lesley, S.A.,Joachimiak, A.,Minor, W. Identification of unknown protein function using metabolite cocktail screening. Structure 2012 20 1715 1725 3T8R 22553203 Crystal structure of Staphylococcus aureus CymR 2011-08-01 2012-05-16 Ji, Q.,Zhang, L.,Sun, F.,Deng, X.,Liang, H.,Bae, T.,He, C. Staphylococcus aureus CymR Is a New Thiol-based Oxidation-sensing Regulator of Stress Resistance and Oxidative Response. J.Biol.Chem. 2012 287 21102 21109 3TU3 23166655 1.92 Angstrom resolution crystal structure of the full-length SpcU in complex with full-length ExoU from the type III secretion system of Pseudomonas aeruginosa 2011-09-15 2012-05-23 Halavaty, A.S.,Borek, D.,Tyson, G.H.,Veesenmeyer, J.L.,Shuvalova, L.,Minasov, G.,Otwinowski, Z.,Hauser, A.R.,Anderson, W.F. Structure of the Type III Secretion Effector Protein ExoU in Complex with Its Chaperone SpcU. Plos One 2012 7 0 0 4F78 24711382 Crystal Structure of Vancomycin Resistance D,D-dipeptidase VanXYg 2012-05-15 2012-05-23 Meziane-Cherif, D.,Stogios, P.J.,Evdokimova, E.,Savchenko, A.,Courvalin, P. Structural basis for the evolution of vancomycin resistance D,D-peptidases. Proc.Natl.Acad.Sci.USA 2014 111 5872 5877 4E5K 22564171 Thermostable phosphite dehydrogenase in complex with NAD and sulfite 2012-03-14 2012-05-30 Zou, Y.,Zhang, H.,Brunzelle, J.S.,Johannes, T.W.,Woodyer, R.,Hung, J.E.,Nair, N.,van der Donk, W.A.,Zhao, H.,Nair, S.K. Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration. Biochemistry 2012 51 4263 4270 4E5M 22564171 Thermostable phosphite dehydrogenase E175A/A176R in complex with NADP 2012-03-14 2012-05-30 Zou, Y.,Zhang, H.,Brunzelle, J.S.,Johannes, T.W.,Woodyer, R.,Hung, J.E.,Nair, N.,van der Donk, W.A.,Zhao, H.,Nair, S.K. Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration. Biochemistry 2012 51 4263 4270 4E5N 22564171 Thermostable phosphite dehydrogenase in complex with NAD 2012-03-14 2012-05-30 Zou, Y.,Zhang, H.,Brunzelle, J.S.,Johannes, T.W.,Woodyer, R.,Hung, J.E.,Nair, N.,van der Donk, W.A.,Zhao, H.,Nair, S.K. Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration. Biochemistry 2012 51 4263 4270 4EBF 22564171 SeMet thermostable phosphite dehydrogenase Glu175-Ala mutant 2012-03-23 2012-05-30 Zou, Y.,Zhang, H.,Brunzelle, J.S.,Johannes, T.W.,Woodyer, R.,Hung, J.E.,Nair, N.,van der Donk, W.A.,Zhao, H.,Nair, S.K. Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration. Biochemistry 2012 51 4263 4270 4EXN 22579672 Crystal structure of mouse Interleukin-34 2012-04-30 2012-05-30 Liu, H.,Leo, C.,Chen, X.,Wong, B.R.,Williams, L.T.,Lin, H.,He, X. The mechanism of shared but distinct CSF-1R signaling by the non-homologous cytokines IL-34 and CSF-1. Biochim.Biophys.Acta 2012 1824 938 945 4EXP 22579672 Structure of mouse Interleukin-34 in complex with mouse FMS 2012-04-30 2012-05-30 Liu, H.,Leo, C.,Chen, X.,Wong, B.R.,Williams, L.T.,Lin, H.,He, X. The mechanism of shared but distinct CSF-1R signaling by the non-homologous cytokines IL-34 and CSF-1. Biochim.Biophys.Acta 2012 1824 938 945 3RZJ 22659876 Duplex Interrogation by a Direct DNA Repair Protein in the Search of Damage 2011-05-11 2012-06-06 Yi, C.,Chen, B.,Qi, B.,Zhang, W.,Jia, G.,Zhang, L.,Li, C.J.,Dinner, A.R.,Yang, C.G.,He, C. Duplex interrogation by a direct DNA repair protein in search of base damage Nat.Struct.Mol.Biol. 2012 19 671 676 3RZJ 22659876 Duplex Interrogation by a Direct DNA Repair Protein in the Search of Damage 2011-05-11 2012-06-06 Yi, C.,Chen, B.,Qi, B.,Zhang, W.,Jia, G.,Zhang, L.,Li, C.J.,Dinner, A.R.,Yang, C.G.,He, C. 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Acta Crystallogr.,Sect.F 2012 68 622 625 3UKB 22614180 (R)-cEt-BNA decamer structure 2011-11-09 2012-06-20 Pallan, P.S.,Allerson, C.R.,Berdeja, A.,Seth, P.P.,Swayze, E.E.,Prakash, T.P.,Egli, M. Structure and nuclease resistance of 2',4'-constrained 2'-O-methoxyethyl (cMOE) and 2'-O-ethyl (cEt) modified DNAs. Chem.Commun.(Camb.) 2012 48 8195 8197 3UKE 22614180 (S)-cMOE-BNA decamer structure 2011-11-09 2012-06-20 Pallan, P.S.,Allerson, C.R.,Berdeja, A.,Seth, P.P.,Swayze, E.E.,Prakash, T.P.,Egli, M. Structure and nuclease resistance of 2',4'-constrained 2'-O-methoxyethyl (cMOE) and 2'-O-ethyl (cEt) modified DNAs. Chem.Commun.(Camb.) 2012 48 8195 8197 4ETS 22665794 Crystal structure of Campylobacter jejuni ferric uptake regulator 2012-04-24 2012-06-20 Butcher, J.,Sarvan, S.,Brunzelle, J.S.,Couture, J.F.,Stintzi, A. Structure and regulon of Campylobacter jejuni ferric uptake regulator Fur define apo-Fur regulation. Proc.Natl.Acad.Sci.USA 2012 109 10047 10052 3ROE 22940582 Crystal Structure of Mouse Apolipoprotein A-I Binding Protein in Complex with Thymidine 2011-04-25 2012-07-18 Shumilin, I.A.,Cymborowski, M.,Chertihin, O.,Jha, K.N.,Herr, J.C.,Lesley, S.A.,Joachimiak, A.,Minor, W. Identification of unknown protein function using metabolite cocktail screening. Structure 2012 20 1715 1725 4DNC 22547026 Crystal structure of human MOF in complex with MSL1 2012-02-08 2012-07-25 Huang, J.,Wan, B.,Wu, L.,Yang, Y.,Dou, Y.,Lei, M. Structural insight into the regulation of MOF in the male-specific lethal complex and the non-specific lethal complex. Cell Res. 2012 22 1078 1081 4FZR 23526584 Crystal Structure of SsfS6, Streptomyces sp. SF2575 glycosyltransferase 2012-07-07 2012-07-25 Wang, F.,Zhou, M.,Singh, S.,Yennamalli, R.M.,Bingman, C.A.,Thorson, J.S.,Phillips, G.N. Crystal structure of SsfS6, the putative C-glycosyltransferase involved in SF2575 biosynthesis. Proteins 2013 81 1277 1282 4G2T 23526584 Crystal Structure of Streptomyces sp. SF2575 glycosyltransferase SsfS6, complexed with thymidine diphosphate 2012-07-12 2012-07-25 Wang, F.,Zhou, M.,Singh, S.,Yennamalli, R.M.,Bingman, C.A.,Thorson, J.S.,Phillips, G.N. Crystal structure of SsfS6, the putative C-glycosyltransferase involved in SF2575 biosynthesis. Proteins 2013 81 1277 1282 3S4X 22948919 Crystal structure of the Asn152Gly mutant of P99 beta-lactamase 2011-05-20 2012-08-01 Ruble, J.F.,Lefurgy, S.T.,Cornish, V.W.,Powers, R.A. Structural analysis of the Asn152Gly mutant of P99 cephalosporinase. Acta Crystallogr.,Sect.D 2012 68 1189 1193 4FFX 22812634 Structural and Biochemical Characterization of Human Adenylosuccinate Lyase (ADSL) and the R303C ADSL Deficiency Associated Mutation 2012-06-01 2012-08-01 Ray, S.P.,Deaton, M.K.,Capodagli, G.C.,Calkins, L.A.,Sawle, L.,Ghosh, K.,Patterson, D.,Pegan, S.D. Structural and Biochemical Characterization of Human Adenylosuccinate Lyase (ADSL) and the R303C ADSL Deficiency-Associated Mutation. Biochemistry 2012 51 6701 6713 4FLC 22812634 Structural and Biochemical Characterization of Human Adenylosuccinate Lyase (ADSL) and the R303C ADSL Deficiency Associated Mutation 2012-06-14 2012-08-01 Ray, S.P.,Deaton, M.K.,Capodagli, G.C.,Calkins, L.A.,Sawle, L.,Ghosh, K.,Patterson, D.,Pegan, S.D. Structural and Biochemical Characterization of Human Adenylosuccinate Lyase (ADSL) and the R303C ADSL Deficiency-Associated Mutation. Biochemistry 2012 51 6701 6713 4AY9 22802634 Structure of follicle-stimulating hormone in complex with the entire ectodomain of its receptor 2012-06-19 2012-08-08 Jiang, X.,Liu, H.,Chen, X.,Chen, P.,Fischer, D.,Sriraman, V.,Yu, H.N.,Arkinstall, S.,He, X. Structure of Follicle-Stimulating Hormone in Complex with the Entire Ectodomain of its Receptor. Proc.Natl.Acad.Sci.USA 2012 109 12491 0 4FVT 22849721 Human SIRT3 bound to Ac-ACS peptide and Carba-NAD 2012-06-29 2012-08-15 Szczepankiewicz, B.G.,Dai, H.,Koppetsch, K.J.,Qian, D.,Jiang, F.,Mao, C.,Perni, R.B. Synthesis of Carba-NAD and the Structures of Its Ternary Complexes with SIRT3 and SIRT5. J.Org.Chem. 2012 77 7319 7329 4GFP 2.7 Angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (AroA) from Coxiella burnetii in a second conformational state 2012-08-03 2012-08-15 Light, S.H.,Minasov, G.,Krishna, S.N.,Shuvalova, L.,Papazisi, L.,Anderson, W.F. 2.7 Angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (AroA) from Coxiella burnetii in second conformational state TO BE PUBLISHED 0 0 0 0 4GFQ 2.65 Angstrom Resolution Crystal Structure of Ribosome Recycling Factor (frr) from Bacillus anthracis 2012-08-03 2012-08-15 Minasov, G.,Halavaty, A.,Shuvalova, L.,Dubrovska, I.,Winsor, J.,Papazisi, L.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 2.65 Angstrom Resolution Crystal Structure of Ribosome Recycling Factor (frr) from Bacillus anthracis TO BE PUBLISHED 0 0 0 0 4GFS 1.8 Angstrom Crystal Structure of the 3-Dehydroquinate Dehydratase (aroD) from Salmonella typhimurium LT2 with Nickel Bound at Active Site 2012-08-03 2012-08-15 Light, S.H.,Minasov, G.,Krishna, S.N.,Shuvalova, L.,Kwon, K.,Lavie, A.,Anderson, W.F. 1.8 Angstrom Crystal Structure of the 3-Dehydroquinate Dehydratase (aroD) from Salmonella typhimurium LT2 with Nickel Bound at Active Site TO BE PUBLISHED 0 0 0 0 4G68 22918832 Biochemical and structural insights into xylan utilization by the thermophilic bacteriumcaldanaerobius polysaccharolyticus 2012-07-18 2012-08-22 Han, Y.,Agarwal, V.,Dodd, D.,Kim, J.,Bae, B.,Mackie, R.I.,Nair, S.K.,Cann, I.K. Biochemical and Structural Insights into Xylan Utilization by the Thermophilic Bacterium Caldanaerobius polysaccharolyticus. J.Biol.Chem. 2012 287 34946 34960 3SD8 Crystal structure of Ara-FHNA decamer DNA 2011-06-08 2012-08-29 Egli, M.,Pallan, P.S.,Allerson, C.R.,Prakash, T.P.,Berdeja, A.,Yu, J.,Bhat, B.,Swayze, E.E.,Seth, P. Structural Origins of Opposite Effects on Stability by Axial and Equatorial 3'-Fluoro Modifications of Hexitol Nucleic Acid (HNA) To be Published 0 0 0 0 4FAE 24832048 Substrate p2/NC in Complex with a Human Immunodeficiency Virus Type 1 Protease Variant 2012-05-22 2012-08-29 Wang, Y.,Dewdney, T.G.,Liu, Z.,Reiter, S.J.,Brunzelle, J.S.,Kovari, I.A.,Kovari, L.C. Higher Desolvation Energy Reduces Molecular Recognition in Multi-Drug Resistant HIV-1 Protease. 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J.Biol.Chem. 2012 287 34614 34625 4FEM 22910908 Structure of SusE with alpha-cyclodextrin 2012-05-30 2012-08-29 Cameron, E.A.,Maynard, M.A.,Smith, C.J.,Smith, T.J.,Koropatkin, N.M.,Martens, E.C. Multidomain Carbohydrate-binding Proteins Involved in Bacteroides thetaiotaomicron Starch Metabolism. J.Biol.Chem. 2012 287 34614 34625 4GUF 23341204 1.5 Angstrom Crystal Structure of the Salmonella enterica 3-Dehydroquinate Dehydratase (aroD) E86A Mutant 2012-08-29 2012-09-12 Light, S.H.,Anderson, W.F.,Lavie, A. Reassessing the type I dehydroquinate dehydratase catalytic triad: Kinetic and structural studies of Glu86 mutants. Protein Sci. 2013 22 418 424 4GUG 23341204 1.62 Angstrom Crystal Structure of the Salmonella enterica 3-Dehydroquinate Dehydratase (aroD) E86A Mutant in Complex with Dehydroshikimate (Crystal Form #1) 2012-08-29 2012-09-12 Light, S.H.,Anderson, W.F.,Lavie, A. 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Blood 2012 120 4461 4469 4GQ3 22936661 Human menin with bound inhibitor MI-2 2012-08-22 2012-09-19 Shi, A.,Murai, M.J.,He, S.,Lund, G.,Hartley, T.,Purohit, T.,Reddy, G.,Chruszcz, M.,Grembecka, J.,Cierpicki, T. Structural insights into inhibition of the bivalent menin-MLL interaction by small molecules in leukemia. Blood 2012 120 4461 4469 4GQ4 22936661 Human menin with bound inhibitor MI-2-2 2012-08-22 2012-09-19 Shi, A.,Murai, M.J.,He, S.,Lund, G.,Hartley, T.,Purohit, T.,Reddy, G.,Chruszcz, M.,Grembecka, J.,Cierpicki, T. Structural insights into inhibition of the bivalent menin-MLL interaction by small molecules in leukemia. Blood 2012 120 4461 4469 4GQ6 22936661 Human menin in complex with MLL peptide 2012-08-22 2012-09-19 Shi, A.,Murai, M.J.,He, S.,Lund, G.,Hartley, T.,Purohit, T.,Reddy, G.,Chruszcz, M.,Grembecka, J.,Cierpicki, T. Structural insights into inhibition of the bivalent menin-MLL interaction by small molecules in leukemia. Blood 2012 120 4461 4469 4AGD 22988103 CRYSTAL STRUCTURE OF VEGFR2 (JUXTAMEMBRANE AND KINASE DOMAINS) IN COMPLEX WITH SUNITINIB (SU11248) (N-2-diethylaminoethyl)-5-((Z)-(5- fluoro-2-oxo-1H-indol-3-ylidene)methyl)-2,4-dimethyl-1H-pyrrole-3- carboxamide) 2012-01-26 2012-09-26 Mctigue, M.,Murray, B.W.,Chen, J.H.,Deng, Y.,Solowiej, J.,Kania, R.S. Molecular Conformations, Interactions, and Properties Associated with Drug Efficiency and Clinical Performance Among Vegfr Tk Inhibitors. Proc.Natl.Acad.Sci.USA 2012 109 18281 0 4H6V 23177196 Structure of Patellamide maturation protease PatA 2012-09-19 2012-10-03 Agarwal, V.,Pierce, E.,McIntosh, J.,Schmidt, E.W.,Nair, S.K. Structures of cyanobactin maturation enzymes define a family of transamidating proteases. Chem.Biol. 2012 19 1411 1422 4H6W 23177196 Structure of Prenylagaramide maturation protease PagA 2012-09-19 2012-10-03 Agarwal, V.,Pierce, E.,McIntosh, J.,Schmidt, E.W.,Nair, S.K. Structures of cyanobactin maturation enzymes define a family of transamidating proteases. Chem.Biol. 2012 19 1411 1422 4H6X 23177196 Structure of Patellamide maturation protease PatG 2012-09-19 2012-10-03 Agarwal, V.,Pierce, E.,McIntosh, J.,Schmidt, E.W.,Nair, S.K. Structures of cyanobactin maturation enzymes define a family of transamidating proteases. Chem.Biol. 2012 19 1411 1422 4EUA 23030530 Succinyl-CoA:acetate CoA-transferase (AarCH6-R228E) in complex with CoA (anomalous dataset) 2012-04-25 2012-10-10 Mullins, E.A.,Kappock, T.J. Crystal Structures of Acetobacter aceti Succinyl-Coenzyme A (CoA):Acetate CoA-Transferase Reveal Specificity Determinants and Illustrate the Mechanism Used by Class I CoA-Transferases. Biochemistry 2012 51 8422 8434 4GUC 1.4 Angstrom resolution crystal structure of uncharacterized protein BA_2500 from Bacillus anthracis str. Ames 2012-08-29 2012-10-10 Halavaty, A.S.,Wawrzak, Z.,Onopriyenko, O.,Kwon, K.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.4 Angstrom resolution crystal structure of uncharacterized protein BA_2500 from Bacillus anthracis str. Ames To be Published 0 0 0 0 4ETW 23045647 Structure of the Enzyme-ACP Substrate Gatekeeper Complex Required for Biotin Synthesis 2012-04-24 2012-10-17 Agarwal, V.,Lin, S.,Lukk, T.,Nair, S.K.,Cronan, J.E. Structure of the enzyme-acyl carrier protein (ACP) substrate gatekeeper complex required for biotin synthesis. Proc.Natl.Acad.Sci.USA 2012 109 17406 17411 3SJM Crystal Structure Analysis of TRF2-Dbd-DNA complex 2011-06-21 2012-10-31 Nair, S.K.,Sliverman, S.K.,Chen, J.H.,Xiao, Y. Crystal Structure Analysis of TRF2-Dbd-DNA complex To be Published 0 0 0 0 4HJF EAL domain of phosphodiesterase PdeA in complex with c-di-GMP and Ca++ 2012-10-12 2012-10-31 Filippova, E.V.,Minasov, G.,Shuvalova, L.,Kiryukhina, O.,Massa, C.,Schirmer, T.,Joachimiak, A.,Anderson, W.F. Crystal structure of EAL domain from Caulobacter crescentus in complex with c-di-GMP and Ca TO BE PUBLISHED 0 0 0 0 3VZW 20351243 Crystal Structure of outer membrane protein PorB from Neisseria meningitidis in complex with galactose 2012-10-17 2012-11-07 Tanabe, M.,Nimigean, C.M.,Iverson, T.M. Structural basis for solute transport, nucleotide regulation, and immunological recognition of Neisseria meningitidis PorB. Proc.Natl.Acad.Sci.USA 2010 107 6811 6816 4H0P 23159802 Crystal Structure of Acetate Kinase from Cryptococcus neoformans 2012-09-09 2012-12-05 Thaker, T.M.,Tanabe, M.,Fowler, M.L.,Preininger, A.M.,Ingram-Smith, C.,Smith, K.S.,Iverson, T.M. Crystal structures of acetate kinases from the eukaryotic pathogens Entamoeba histolytica and Cryptococcus neoformans. J.Struct.Biol. 2013 181 185 189 3SH0 23248302 Crystal Structure of E. coli undecaprenyl pyrophosphate synthase in complex with BPH-1065 2011-06-15 2012-12-19 Zhu, W.,Zhang, Y.,Sinko, W.,Hensler, M.E.,Olson, J.,Molohon, K.J.,Lindert, S.,Cao, R.,Li, K.,Wang, K.,Wang, Y.,Liu, Y.L.,Sankovsky, A.,de Oliveira, C.A.,Mitchell, D.A.,Nizet, V.,McCammon, J.A.,Oldfield, E. Antibacterial drug leads targeting isoprenoid biosynthesis. Proc.Natl.Acad.Sci.USA 2013 110 123 128 4HUE 23275540 Structure of 5-chlorouracil modified G:U base pair 2012-11-02 2012-12-19 Patra, A.,Harp, J.,Pallan, P.S.,Zhao, L.,Abramov, M.,Herdewijn, P.,Egli, M. Structure, stability and function of 5-chlorouracil modified A:U and G:U base pairs. Nucleic Acids Res. 2013 41 2689 2697 4EDE 23224553 Crystal Structure of the Q108K:K40L:T51V:T53C:Y19W:R58W:T29L:A33W Mutant of Cellular Retinol Binding Protein Type II in Complex with All-trans-Retinal at 1.4 Angstrom Resolution 2012-03-27 2012-12-26 Wang, W.,Nossoni, Z.,Berbasova, T.,Watson, C.T.,Yapici, I.,Lee, K.S.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Tuning the electronic absorption of protein-embedded all-trans-retinal. Science 2012 338 1340 1343 4EEJ 23224553 Crystal Structure of the Q108K:K40L:T51V:T53C:Y19W:R58W:T29L:Q4R Mutant of Cellular Retinol Binding Protein Type II in Complex with All-trans-Retinal at 1.5 Angstrom Resolution 2012-03-28 2012-12-26 Wang, W.,Nossoni, Z.,Berbasova, T.,Watson, C.T.,Yapici, I.,Lee, K.S.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Tuning the electronic absorption of protein-embedded all-trans-retinal. Science 2012 338 1340 1343 4EFG 23224553 Crystal Structure of the Q108K:K40L:T51V:T53C:Y19W:R58W:T29L Mutant of Cellular Retinol Binding Protein Type II in Complex with All-trans-Retinal at 1.58 Angstrom Resolution 2012-03-29 2012-12-26 Wang, W.,Nossoni, Z.,Berbasova, T.,Watson, C.T.,Yapici, I.,Lee, K.S.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Tuning the electronic absorption of protein-embedded all-trans-retinal. Science 2012 338 1340 1343 4EXZ 23224553 Crystal Structure of the Q108K:K40L Mutant of Cellular Retinol Binding Protein Type II in Complex with All-trans-Retinal at 1.7 Angstrom Resolution 2012-05-01 2012-12-26 Wang, W.,Nossoni, Z.,Berbasova, T.,Watson, C.T.,Yapici, I.,Lee, K.S.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Tuning the electronic absorption of protein-embedded all-trans-retinal. Science 2012 338 1340 1343 4GKC 23224553 Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with all-trans-retinal at 1.33 2012-08-10 2012-12-26 Wang, W.,Nossoni, Z.,Berbasova, T.,Watson, C.T.,Yapici, I.,Lee, K.S.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Tuning the electronic absorption of protein-embedded all-trans-retinal. Science 2012 338 1340 1343 4HW2 23244564 Discovery of potent Mcl-1 inhibitors using fragment-based methods and structure-based design 2012-11-07 2013-01-09 Friberg, A.,Vigil, D.,Zhao, B.,Daniels, R.N.,Burke, J.P.,Garcia-Barrantes, P.M.,Camper, D.,Chauder, B.A.,Lee, T.,Olejniczak, E.T.,Fesik, S.W. Discovery of potent myeloid cell leukemia 1 (Mcl-1) inhibitors using fragment-based methods and structure-based design. J.Med.Chem. 2013 56 15 30 4E75 23295477 Structure of LpxD from Acinetobacter baumannii at 2.85A resolution (P21 form) 2012-03-16 2013-01-16 Badger, J.,Chie-Leon, B.,Logan, C.,Sridhar, V.,Sankaran, B.,Zwart, P.H.,Nienaber, V. Structure determination of LpxD from the lipopolysaccharide-synthesis pathway of Acinetobacter baumannii. Acta Crystallogr.,Sect.F 2013 69 6 9 4E79 23295477 Structure of LpxD from Acinetobacter baumannii at 2.66A resolution (P4322 form) 2012-03-16 2013-01-16 Badger, J.,Chie-Leon, B.,Logan, C.,Sridhar, V.,Sankaran, B.,Zwart, P.H.,Nienaber, V. Structure determination of LpxD from the lipopolysaccharide-synthesis pathway of Acinetobacter baumannii. Acta Crystallogr.,Sect.F 2013 69 6 9 4FOF 23219880 Crystal Structure of the blue-light absorbing form of the Thermosynechococcus elongatus PixJ GAF-domain 2012-06-20 2013-01-16 Burgie, E.S.,Walker, J.M.,Phillips, G.N.,Vierstra, R.D. A Photo-Labile Thioether Linkage to Phycoviolobilin Provides the Foundation for the Blue/Green Photocycles in DXCF-Cyanobacteriochromes. Structure 2013 21 88 97 4GLQ 23219880 Crystal Structure of the blue-light absorbing form of the Thermosynechococcus elongatus PixJ GAF-domain 2012-08-14 2013-01-16 Burgie, E.S.,Walker, J.M.,Phillips Jr., G.N.,Vierstra, R.D. A Photo-Labile Thioether Linkage to Phycoviolobilin Provides the Foundation for the Blue/Green Photocycles in DXCF-Cyanobacteriochromes. Structure 2013 21 88 97 4IL0 Crystal structure of GlucDRP from E. coli K-12 MG1655 (EFI target EFI-506058) 2012-12-28 2013-01-16 Lukk, T.,Ghasempur, S.,Imker, H.J.,Nair, S.K.,Gerlt, J.A. Glucarate dehydratase and its related protein from Escherichia coli form a heterotetrameric complex. to be published 0 0 0 0 4DEF 23298222 Active site loop dynamics of a class IIa fructose 1,6-bisphosphate aldolase from M. tuberculosis 2012-01-20 2013-01-23 Pegan, S.D.,Rukseree, K.,Capodagli, G.C.,Baker, E.A.,Krasnykh, O.,Franzblau, S.G.,Mesecar, A.D. Active site loop dynamics of a class IIa fructose 1,6-bisphosphate aldolase from Mycobacterium tuberculosis. Biochemistry 2013 52 912 925 4H99 Bacterial Photosynthetic Reaction Center from Rhodobacter sphaeroides with ILE M265 replaced with THR 2012-09-24 2013-01-23 Mattis, A.J.,Wraight, C.A. Bacterial Photosynthetic Reaction Center from Rhodobacter sphaeroides To be Published 0 0 0 0 4H9L Bacterial Photosynthetic Reaction Center from Rhodobacter sphaeroides with ILE M265 replaced with SER 2012-09-24 2013-01-23 Mattis, A.J.,Wraight, C.A. Bacterial Photosynthetic Reaction Center from Rhodobacter sphaeroides To be Published 0 0 0 0 4IR8 1.85 Angstrom Crystal Structure of Putative Sedoheptulose-1,7 bisphosphatase from Toxoplasma gondii 2013-01-14 2013-01-23 Minasov, G.,Ruan, J.,Wawrzak, Z.,Halavaty, A.,Shuvalova, L.,Harb, O.S.,Ngo, H.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.85 Angstrom Crystal Structure of Putative Sedoheptulose-1,7 bisphosphatase from Toxoplasma gondii. TO BE PUBLISHED 0 0 0 0 4EKD 23434405 Structure of human regulator of G protein signaling 2 (RGS2) in complex with murine Galpha-q(R183C) 2012-04-09 2013-01-30 Nance, M.R.,Kreutz, B.,Tesmer, V.M.,Sterne-Marr, R.,Kozasa, T.,Tesmer, J.J. Structural and functional analysis of the regulator of G protein signaling 2-g alpha q complex. Structure 2013 21 438 448 4EYR 23313846 Crystal structure of multidrug-resistant clinical isolate 769 HIV-1 protease in complex with ritonavir 2012-05-01 2013-01-30 Liu, Z.,Yedidi, R.S.,Wang, Y.,Dewdney, T.G.,Reiter, S.J.,Brunzelle, J.S.,Kovari, I.A.,Kovari, L.C. Insights into the mechanism of drug resistance: X-ray structure analysis of multi-drug resistant HIV-1 protease ritonavir complex. Biochem.Biophys.Res.Commun. 2013 431 232 238 4H5B 23441204 Crystal Structure of DR_1245 from Deinococcus radiodurans 2012-09-18 2013-01-30 Norais, C.,Servant, P.,Bouthier-de-la-Tour, C.,Coureux, P.D.,Ithurbide, S.,Vannier, F.,Guerin, P.P.,Dulberger, C.L.,Satyshur, K.A.,Keck, J.L.,Armengaud, J.,Cox, M.M.,Sommer, S. The Deinococcus radiodurans DR1245 Protein, a DdrB Partner Homologous to YbjN Proteins and Reminiscent of Type III Secretion System Chaperones. Plos One 2013 8 0 0 4H5B 23441204 Crystal Structure of DR_1245 from Deinococcus radiodurans 2012-09-18 2013-01-30 Norais, C.,Servant, P.,Bouthier-de-la-Tour, C.,Coureux, P.D.,Ithurbide, S.,Vannier, F.,Guerin, P.P.,Dulberger, C.L.,Satyshur, K.A.,Keck, J.L.,Armengaud, J.,Cox, M.M.,Sommer, S. The Deinococcus radiodurans DR1245 Protein, a DdrB Partner Homologous to YbjN Proteins and Reminiscent of Type III Secretion System Chaperones. Plos One 2013 8 0 0 4HZN 23320975 The Structure of the Bifunctional Acetyltransferase/Decarboxylase LnmK from the Leinamycin Biosynthetic Pathway Revealing Novel Activity for a Double Hot Dog Fold 2012-11-15 2013-01-30 Lohman, J.R.,Bingman, C.A.,Phillips, G.N.,Shen, B. Structure of the Bifunctional Acyltransferase/Decarboxylase LnmK from the Leinamycin Biosynthetic Pathway Revealing Novel Activity for a Double-Hot-Dog Fold. Biochemistry 2013 52 902 911 4IH1 23381136 Crystal structure of Karrikin Insensitive 2 (KAI2) from Arabidopsis thaliana 2012-12-18 2013-01-30 Zhao, L.H.,Zhou, X.E.,Wu, Z.S.,Yi, W.,Xu, Y.,Li, S.,Xu, T.H.,Liu, Y.,Chen, R.Z.,Kovach, A.,Kang, Y.,Hou, L.,He, Y.,Xie, C.,Song, W.,Zhong, D.,Xu, Y.,Wang, Y.,Li, J.,Zhang, C.,Melcher, K.,Xu, H.E. Crystal structures of two phytohormone signal-transducing alpha / beta hydrolases: karrikin-signaling KAI2 and strigolactone-signaling DWARF14. Cell Res. 2013 23 436 439 4IH4 23381136 Crystal structure of Arabidopsis DWARF14 orthologue, AtD14 2012-12-18 2013-01-30 Zhao, L.H.,Zhou, X.E.,Wu, Z.S.,Yi, W.,Xu, Y.,Li, S.,Xu, T.H.,Liu, Y.,Chen, R.Z.,Kovach, A.,Kang, Y.,Hou, L.,He, Y.,Xie, C.,Song, W.,Zhong, D.,Xu, Y.,Wang, Y.,Li, J.,Zhang, C.,Melcher, K.,Xu, H.E. Crystal structures of two phytohormone signal-transducing alpha / beta hydrolases: karrikin-signaling KAI2 and strigolactone-signaling DWARF14. Cell Res. 2013 23 436 439 4GNK 23377541 Crystal structure of Galphaq in complex with full-length human PLCbeta3 2012-08-17 2013-02-06 Lyon, A.M.,Dutta, S.,Boguth, C.A.,Skiniotis, G.,Tesmer, J.J. Full-length G alpha (q)-phospholipase C-beta 3 structure reveals interfaces of the C-terminal coiled-coil domain. Nat.Struct.Mol.Biol. 2013 20 355 362 4IUA Crystal Structure of the NK2 Fragment (31-290) of the mouse Hepatocyte Growth Factor/Scatter Factor 2013-01-20 2013-02-13 Tolbert, W.D.,Zhou, E.,Kovach, A.,Melcher, K.,Xu, H.E. Crystal Structure of the NK2 Fragment of the mouse Hepatocyte Growth Factor/Scatter Factor To be Published 0 0 0 0 4ISC Crystal structure of a putative Methyltransferase from Pseudomonas syringae 2013-01-16 2013-02-20 Filippova, E.V.,Wawrzak, Z.,Minasov, G.,Shuvalova, L.,Kiryukhina, O.,Clancy, S.,Joachimiak, A.,Anderson, W.F.,Midwest Center for Structural Genomics (MCSG) Crystal structure of a putative Methyltransferase from Pseudomonas syringae To be Published 0 0 0 0 4DSA Crystal Structure of DPP-IV with Compound C1 2012-02-18 2013-02-27 Xiong, B.,Zhu, L.R.,Chen, D.Q.,Zhao, Y.L.,Jiang, F.,Shen, J.K. Crystal Structure of DPP-IV with Compound C1 To be Published 0 0 0 0 4DSZ Crystal Structure of DPP-IV with Compound C2 2012-02-20 2013-02-27 Xiong, B.,Zhu, L.R.,Chen, D.Q.,Zhao, Y.L.,Jiang, F.,Shen, J.K. Crystal Structure of DPP-IV with Compound C2 To be Published 0 0 0 0 4DTC Crystal Structure of DPP-IV with Compound C5 2012-02-21 2013-02-27 Xiong, B.,Zhu, L.R.,Chen, D.Q.,Zhao, Y.L.,Jiang, F.,Shen, J.K. Crystal Structure of DPP-IV with Compound C5 To be Published 0 0 0 0 4IJJ 23416301 Structure of transcription factor DksA2 from Pseudomonas aeruginosa 2012-12-21 2013-02-27 Furman, R.,Biswas, T.,Danhart, E.M.,Foster, M.P.,Tsodikov, O.V.,Artsimovitch, I. DksA2, a zinc-independent structural analog of the transcription factor DksA. Febs Lett. 2013 587 614 619 4HQE 23479646 The crystal structure of QsrR-DNA complex 2012-10-25 2013-03-06 Ji, Q.,Zhang, L.,Jones, M.B.,Sun, F.,Deng, X.,Liang, H.,Cho, H.,Brugarolas, P.,Gao, Y.N.,Peterson, S.N.,Lan, L.,Bae, T.,He, C. Molecular mechanism of quinone signaling mediated through S-quinonization of a YodB family repressor QsrR. Proc.Natl.Acad.Sci.USA 2013 110 5010 5015 4I80 23244744 Crystal structure of human menin in complex with a high-affinity macrocyclic peptidomimetics 2012-12-01 2013-03-06 Zhou, H.,Liu, L.,Huang, J.,Bernard, D.,Karatas, H.,Navarro, A.,Lei, M.,Wang, S. Structure-Based Design of High-Affinity Macrocyclic Peptidomimetics to Block the Menin-Mixed Lineage Leukemia 1 (MLL1) Protein-Protein Interaction. J.Med.Chem. 2013 56 1113 1123 4DQ9 24316251 Crystal structure of the minor pseudopilin EPSH from the type II secretion system of Vibrio cholerae 2012-02-15 2013-03-13 Raghunathan, K.,Vago, F.S.,Grindem, D.,Ball, T.,Wedemeyer, W.J.,Bagdasarian, M.,Arvidson, D.N. The 1.59 angstrom resolution structure of the minor pseudopilin EpsH of Vibrio cholerae reveals a long flexible loop. Biochim.Biophys.Acta 2013 1844 406 415 4IAQ 23519210 Crystal structure of the chimeric protein of 5-HT1B-BRIL in complex with dihydroergotamine (PSI Community Target) 2012-12-07 2013-03-13 Wang, C.,Jiang, Y.,Ma, J.,Wu, H.,Wacker, D.,Katritch, V.,Han, G.W.,Liu, W.,Huang, X.P.,Vardy, E.,McCorvy, J.D.,Gao, X.,Zhou, X.E.,Melcher, K.,Zhang, C.,Bai, F.,Yang, H.,Yang, L.,Jiang, H.,Roth, B.L.,Cherezov, V.,Stevens, R.C.,Xu, H.E. Structural basis for molecular recognition at serotonin receptors. Science 2013 340 610 614 4IAR 23519210 Crystal structure of the chimeric protein of 5-HT1B-BRIL in complex with ergotamine (PSI Community Target) 2012-12-07 2013-03-13 Wang, C.,Jiang, Y.,Ma, J.,Wu, H.,Wacker, D.,Katritch, V.,Han, G.W.,Liu, W.,Huang, X.P.,Vardy, E.,McCorvy, J.D.,Gao, X.,Zhou, X.E.,Melcher, K.,Zhang, C.,Bai, F.,Yang, H.,Yang, L.,Jiang, H.,Roth, B.L.,Cherezov, V.,Stevens, R.C.,Xu, H.E. Structural basis for molecular recognition at serotonin receptors. Science 2013 340 610 614 4IRX 23504019 Crystal structure of Caulobacter myo-inositol binding protein bound to myo-inositol 2013-01-15 2013-03-20 Herrou, J.,Crosson, S. myo-inositol and D-ribose ligand discrimination in an ABC periplasmic binding protein. J.Bacteriol. 2013 195 2379 2388 4JNN Crystal structure of a putative transcriptional regulator from Saccharomonospora viridis in complex with benzamidine 2013-03-15 2013-04-10 Filippova, E.V.,Minasov, G.,Shuvalova, L.,Kiryukhina, O.,Endres, M.,Joachimiak, A.,Anderson, W.F.,Midwest Center for Structural Genomics (MCSG) Crystal structure of a putative transcriptional regulator from Saccharomonospora viridis in complex with benzamidine To be Published 0 0 0 0 3T33 Crystal Structure of Arabidopsis GCR2 2011-07-24 2013-04-17 Chen, J.-H.,Guo, J.,Chen, J.-G.,Nair, S.K. Crystal Structure of Arabidopsis GCR2 Identifies a Novel Clade of Lantibiotic Cyclase-Like Proteins To be Published 0 0 0 0 4EPU Ang1 fibrinogen-related domain (FReD) 2012-04-17 2013-04-17 Yeykal, C.C.,Sundaresan, L.,Mrksich, M.,Adams, E.J. Biochemical and structural characterization of the Ang1 fibrinogen-related domain To be Published 0 0 0 0 4JT8 23570514 Crystal Structure of human SIRT3 with ELT inhibitor 28 [4-(4-{2-[(2,2-dimethylpropanoyl)amino]ethyl}piperidin-1-yl)thieno[3,2-d]pyrimidine-6-carboxamide[ 2013-03-22 2013-04-24 Disch, J.S.,Evindar, G.,Chiu, C.H.,Blum, C.A.,Dai, H.,Jin, L.,Schuman, E.,Lind, K.E.,Belyanskaya, S.L.,Deng, J.,Coppo, F.,Aquilani, L.,Graybill, T.L.,Cuozzo, J.W.,Lavu, S.,Mao, C.,Vlasuk, G.P.,Perni, R.B. Discovery of Thieno[3,2-d]pyrimidine-6-carboxamides as Potent Inhibitors of SIRT1, SIRT2, and SIRT3. J.Med.Chem. 2013 56 3666 3679 4K6A 24756028 Revised Crystal Structure of apo-form of Triosephosphate Isomerase (tpiA) from Escherichia coli at 1.8 Angstrom Resolution. 2013-04-15 2013-05-01 Kuhn, M.L.,Zemaitaitis, B.,Hu, L.I.,Sahu, A.,Sorensen, D.,Minasov, G.,Lima, B.P.,Scholle, M.,Mrksich, M.,Anderson, W.F.,Gibson, B.W.,Schilling, B.,Wolfe, A.J. Structural, kinetic and proteomic characterization of acetyl phosphate-dependent bacterial protein acetylation. PLoS ONE 2014 9 0 0 4I5L 23752926 Structural mechanism of trimeric PP2A holoenzyme involving PR70: insight for Cdc6 dephosphorylation 2012-11-28 2013-05-08 Wlodarchak, N.,Guo, F.,Satyshur, K.A.,Jiang, L.,Jeffrey, P.D.,Sun, T.,Stanevich, V.,Mumby, M.C.,Xing, Y. Structure of the Ca(2+)-dependent PP2A heterotrimer and insights into Cdc6 dephosphorylation. Cell Res. 2013 23 931 946 4I5N 23752926 Structural mechanism of trimeric PP2A holoenzyme involving PR70: insight for Cdc6 dephosphorylation 2012-11-28 2013-05-08 Wlodarchak, N.,Guo, F.,Satyshur, K.A.,Jiang, L.,Jeffrey, P.D.,Sun, T.,Stanevich, V.,Mumby, M.C.,Xing, Y. Structure of the Ca(2+)-dependent PP2A heterotrimer and insights into Cdc6 dephosphorylation. Cell Res. 2013 23 931 946 4IVA 23659214 JAK2 kinase (JH1 domain) in complex with the inhibitor TRANS-4-[(8AS)-2-[(1R)-1-HYDROXYETHYL]IMIDAZO[4,5-D]PYRROLO[2,3-B]PYRIDIN-1(8AH)-YL]CYCLOHEXANECARBONITRILE 2013-01-22 2013-05-22 Zak, M.,Hurley, C.A.,Ward, S.I.,Bergeron, P.,Barrett, K.,Balazs, M.,Blair, W.S.,Bull, R.,Chakravarty, P.,Chang, C.,Crackett, P.,Deshmukh, G.,Devoss, J.,Dragovich, P.S.,Eigenbrot, C.,Ellwood, C.,Gaines, S.,Ghilardi, N.,Gibbons, P.,Gradl, S.,Gribling, P.,Hamman, C.,Harstad, E.,Hewitt, P.,Johnson, A.,Johnson, T.,Kenny, J.R.,Koehler, M.F.,Bir Kohli, P.,Labadie, S.,Lee, W.P.,Liao, J.,Liimatta, M.,Mendonca, R.,Narukulla, R.,Pulk, R.,Reeve, A.,Savage, S.,Shia, S.,Steffek, M.,Ubhayakar, S.,van Abbema, A.,Aliagas, I.,Avitabile-Woo, B.,Xiao, Y.,Yang, J.,Kulagowski, J.J. Identification of C-2 Hydroxyethyl Imidazopyrrolopyridines as Potent JAK1 Inhibitors with Favorable Physicochemical Properties and High Selectivity over JAK2. J.Med.Chem. 2013 56 4764 4785 4HFW 23671563 Anti Rotavirus Antibody 2012-10-05 2013-05-29 Aiyegbo, M.S.,Sapparapu, G.,Spiller, B.W.,Eli, I.M.,Williams, D.R.,Kim, R.,Lee, D.E.,Liu, T.,Li, S.,Woods, V.L.,Nannemann, D.P.,Meiler, J.,Stewart, P.L.,Crowe, J.E. Human Rotavirus VP6-Specific Antibodies Mediate Intracellular Neutralization by Binding to a Quaternary Structure in the Transcriptional Pore. Plos One 2013 8 0 0 4KNA Crystal structure of an N-succinylglutamate 5-semialdehyde dehydrogenase from Burkholderia thailandensis 2013-05-09 2013-06-05 Edwards, T.E.,Abendroth, J.,Seattle Structural Genomics Center for Infectious Disease (SSGCID) Crystal structure of an N-succinylglutamate 5-semialdehyde dehydrogenase from Burkholderia thailandensis TO BE PUBLISHED 0 0 0 0 4KNG 23756651 Crystal structure of human LGR5-RSPO1-RNF43 2013-05-09 2013-06-19 Chen, P.H.,Chen, X.,Lin, Z.,Fang, D.,He, X. The structural basis of R-spondin recognition by LGR5 and RNF43. Genes Dev. 2013 27 1345 1350 4KWU 1.9 Angstrom resolution crystal structure of uncharacterized protein lmo2446 from Listeria monocytogenes EGD-e in complex with alpha-D-glucose, beta-D-glucose, magnesium and calcium 2013-05-24 2013-06-19 Halavaty, A.S.,Minasov, G.,Dubrovska, I.,Winsor, J.,Shuvalova, L.,Peterson, S.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.9 Angstrom resolution crystal structure of uncharacterized protein lmo2446 from Listeria monocytogenes EGD-e in complex with alpha-D-glucose, beta-D-glucose, magnesium and calcium To be Published 0 0 0 0 4FP1 24472022 P. putida mandelate racemase co-crystallized with 3,3,3-trifluoro-2-hydroxy-2-(trifluoromethyl) propionic acid 2012-06-21 2013-06-26 Nagar, M.,Lietzan, A.D.,St Maurice, M.,Bearne, S.L. Potent inhibition of mandelate racemase by a fluorinated substrate-product analogue with a novel binding mode. Biochemistry 2014 53 1169 1178 4JM3 23758195 Enduracididine Biosynthesis Enzyme MppR with HEPES Buffer Bound 2013-03-13 2013-07-03 Burroughs, A.M.,Hoppe, R.W.,Goebel, N.C.,Sayyed, B.H.,Voegtline, T.J.,Schwabacher, A.W.,Zabriskie, T.M.,Silvaggi, N.R. Structural and Functional Characterization of MppR, an Enduracididine Biosynthetic Enzyme from Streptomyces hygroscopicus: Functional Diversity in the Acetoacetate Decarboxylase-like Superfamily. Biochemistry 2013 52 4492 4506 4HQI 23748954 Structure of O6-Benzyl-2'-deoxyguanosine opposite perimidinone-derived synthetic nucleoside in DNA duplex 2012-10-25 2013-07-10 Kowal, E.A.,Lad, R.R.,Pallan, P.S.,Dhummakupt, E.,Wawrzak, Z.,Egli, M.,Sturla, S.J.,Stone, M.P. Recognition of O6-benzyl-2'-deoxyguanosine by a perimidinone-derived synthetic nucleoside: a DNA interstrand stacking interaction. Nucleic Acids Res. 2013 41 7566 7576 4I9F 23801751 Crystal structure of glycerol phosphate phosphatase Rv1692 from Mycobacterium tuberculosis in complex with calcium 2012-12-05 2013-07-10 Larrouy-Maumus, G.,Biswas, T.,Hunt, D.M.,Kelly, G.,Tsodikov, O.V.,de Carvalho, L.P. Discovery of a glycerol 3-phosphate phosphatase reveals glycerophospholipid polar head recycling in Mycobacterium tuberculosis. Proc.Natl.Acad.Sci.USA 2013 110 11320 11325 4I9G 23801751 Crystal structure of glycerol phosphate phosphatase Rv1692 from Mycobacterium tuberculosis in complex with magnesium 2012-12-05 2013-07-10 Larrouy-Maumus, G.,Biswas, T.,Hunt, D.M.,Kelly, G.,Tsodikov, O.V.,de Carvalho, L.P. Discovery of a glycerol 3-phosphate phosphatase reveals glycerophospholipid polar head recycling in Mycobacterium tuberculosis. Proc.Natl.Acad.Sci.USA 2013 110 11320 11325 4HQP Alpha7 nicotinic receptor chimera and its complex with Alpha bungarotoxin 2012-10-25 2013-07-17 Li, S.X.,Cheng, K.,Gomoto, R.,Bren, N.,Huang, S.,Sine, S.,Chen, L. Structural principles for Alpha-neurotoxin binding to and selectivity among nicotinic receptors To be Published 0 0 0 0 4KZO 23731180 Crystal Structure Analysis of human IDH1 mutants in complex with NADP+ and Ca2+/alpha-Ketoglutarate 2013-05-30 2013-07-17 Rendina, A.R.,Pietrak, B.,Smallwood, A.,Zhao, H.,Qi, H.,Quinn, C.,Adams, N.D.,Concha, N.,Duraiswami, C.,Thrall, S.H.,Sweitzer, S.,Schwartz, B. Mutant IDH1 Enhances the Production of 2-Hydroxyglutarate Due to Its Kinetic Mechanism. Biochemistry 2013 52 4563 4577 4L03 23731180 Crystal Structure Analysis of human IDH1 mutants in complex with NADP+ and Ca2+/alpha-Ketoglutarate 2013-05-30 2013-07-17 Rendina, A.R.,Pietrak, B.,Smallwood, A.,Zhao, H.,Qi, H.,Quinn, C.,Adams, N.D.,Concha, N.,Duraiswami, C.,Thrall, S.H.,Sweitzer, S.,Schwartz, B. Mutant IDH1 Enhances the Production of 2-Hydroxyglutarate Due to Its Kinetic Mechanism. Biochemistry 2013 52 4563 4577 4KNS 23857587 Reduced crystal structure of the Nitrosomonas europaea copper nitrite reductase at pH 6.5 2013-05-10 2013-07-24 Lawton, T.J.,Bowen, K.E.,Sayavedra-Soto, L.A.,Arp, D.J.,Rosenzweig, A.C. Characterization of a nitrite reductase involved in nitrifier denitrification. J.Biol.Chem. 2013 288 25575 25583 4KNT 23857587 Copper nitrite reductase from Nitrosomonas europaea pH 8.5 2013-05-10 2013-07-24 Lawton, T.J.,Bowen, K.E.,Sayavedra-Soto, L.A.,Arp, D.J.,Rosenzweig, A.C. Characterization of a nitrite reductase involved in nitrifier denitrification. J.Biol.Chem. 2013 288 25575 25583 4KNU 23857587 Copper nitrite reductase from Nitrosomonas europaea at pH 6.5 2013-05-10 2013-07-24 Lawton, T.J.,Bowen, K.E.,Sayavedra-Soto, L.A.,Arp, D.J.,Rosenzweig, A.C. Characterization of a nitrite reductase involved in nitrifier denitrification. J.Biol.Chem. 2013 288 25575 25583 4L06 23731180 Crystal Structure Analysis of human IDH1 mutants in complex with NADP+ and Ca2+/alpha-Ketoglutarate 2013-05-30 2013-07-24 Rendina, A.R.,Pietrak, B.,Smallwood, A.,Zhao, H.,Qi, H.,Quinn, C.,Adams, N.D.,Concha, N.,Duraiswami, C.,Thrall, S.H.,Sweitzer, S.,Schwartz, B. Mutant IDH1 Enhances the Production of 2-Hydroxyglutarate Due to Its Kinetic Mechanism. Biochemistry 2013 52 4563 4577 4L04 23731180 Crystal Structure Analysis of human IDH1 mutants in complex with NADP+ and Ca2+/alpha-Ketoglutarate 2013-05-30 2013-07-31 Rendina, A.R.,Pietrak, B.,Smallwood, A.,Zhao, H.,Qi, H.,Quinn, C.,Adams, N.D.,Concha, N.,Duraiswami, C.,Thrall, S.H.,Sweitzer, S.,Schwartz, B. Mutant IDH1 Enhances the Production of 2-Hydroxyglutarate Due to Its Kinetic Mechanism. Biochemistry 2013 52 4563 4577 4LIH The crystal structure of Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase from Burkholderia cenocepacia J2315 2013-07-02 2013-07-31 Lukacs, C.M.,Abendroth, J.,Edwards, T.E.,Lorimer, D. The crystal structure of Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase from Burkholderia cenocepacia J2315 TO BE PUBLISHED 0 0 0 0 4K0X 23877677 X-ray Crystal Structure of OXA-23 from Acinetobacter baumannii 2013-04-04 2013-08-07 Kaitany, K.C.,Klinger, N.V.,June, C.M.,Ramey, M.E.,Bonomo, R.A.,Powers, R.A.,Leonard, D.A. Structures of the Class D Carbapenemases OXA-23 and OXA-146: Mechanistic Basis of Activity against Carbapenems, Extended-Spectrum Cephalosporins, and Aztreonam. Antimicrob.Agents Chemother. 2013 57 4848 4855 4F94 Structure of the Class D Beta-Lactamase OXA-24 K84D in Acyl-Enzyme Complex with Oxacillin 2012-05-18 2013-08-14 June, C.M.,Vallier, B.C.,Bonomo, R.A.,Leonard, D.A.,Powers, R.A. Structure of the Class D Beta-Lactamase OXA-24 K84D in Acyl-Enzyme Complex with Oxacillin To be Published 0 0 0 0 4IJH 23914285 Fragment-based Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A 2012-12-21 2013-08-14 Patrone, J.D.,Kennedy, J.P.,Frank, A.O.,Feldkamp, M.D.,Vangamudi, B.,Pelz, N.F.,Rossanese, O.W.,Waterson, A.G.,Chazin, W.J.,Fesik, S.W. Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A. ACS MED.CHEM.LETT. 2013 4 601 605 4IJL 23914285 Fragment-based Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A 2012-12-21 2013-08-14 Patrone, J.D.,Kennedy, J.P.,Frank, A.O.,Feldkamp, M.D.,Vangamudi, B.,Pelz, N.F.,Rossanese, O.W.,Waterson, A.G.,Chazin, W.J.,Fesik, S.W. Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A. ACS MED.CHEM.LETT. 2013 4 601 605 4JF7 23950713 Structure of the parainfluenza virus 5 (PIV5) hemagglutinin-neuraminidase (HN) ectodomain 2013-02-27 2013-09-04 Welch, B.D.,Yuan, P.,Bose, S.,Kors, C.A.,Lamb, R.A.,Jardetzky, T.S. Structure of the Parainfluenza Virus 5 (PIV5) Hemagglutinin-Neuraminidase (HN) Ectodomain. Plos Pathog. 2013 9 0 0 4M8I 1.43 Angstrom resolution crystal structure of cell division protein FtsZ (ftsZ) from Staphylococcus epidermidis RP62A in complex with GDP 2013-08-13 2013-09-04 Halavaty, A.S.,Minasov, G.,Winsor, J.,Dubrovska, I.,Filippova, E.V.,Olsen, D.B.,Therien, A.,Shuvalova, L.,Young, K.,Anderson, W.F. 1.43 Angstrom resolution crystal structure of cell division protein FtsZ (ftsZ) from Staphylococcus epidermidis RP62A in complex with GDP To be Published 0 0 0 0 4IPC 23962067 Structure of the N-terminal domain of RPA70, E7R mutant 2013-01-09 2013-09-11 Feldkamp, M.D.,Frank, A.O.,Kennedy, J.P.,Patrone, J.D.,Vangamudi, B.,Waterson, A.G.,Fesik, S.W.,Chazin, W.J. Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein. Biochemistry 2013 52 6515 6524 4IPD 23962067 Structure of the N-terminal domain of RPA70, E100R mutant 2013-01-09 2013-09-11 Feldkamp, M.D.,Frank, A.O.,Kennedy, J.P.,Patrone, J.D.,Vangamudi, B.,Waterson, A.G.,Fesik, S.W.,Chazin, W.J. Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein. Biochemistry 2013 52 6515 6524 4IPG 23962067 Structure of the N-terminal domain of RPA70, E7R, E100R mutant 2013-01-09 2013-09-11 Feldkamp, M.D.,Frank, A.O.,Kennedy, J.P.,Patrone, J.D.,Vangamudi, B.,Waterson, A.G.,Fesik, S.W.,Chazin, W.J. Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein. Biochemistry 2013 52 6515 6524 4IPH 23962067 Structure of N-terminal domain of RPA70 in complex with VU079104 inhibitor 2013-01-09 2013-09-11 Feldkamp, M.D.,Frank, A.O.,Kennedy, J.P.,Patrone, J.D.,Vangamudi, B.,Waterson, A.G.,Fesik, S.W.,Chazin, W.J. Surface Reengineering of RPA70N Enables Cocrystallization with an Inhibitor of the Replication Protein A Interaction Motif of ATR Interacting Protein. Biochemistry 2013 52 6515 6524 4MPH 24909784 Crystal structure of BaLdcB / VanY-like L,D-carboxypeptidase Zinc(II)-bound 2013-09-12 2013-09-25 Hoyland, C.N.,Aldridge, C.,Cleverley, R.M.,Duchene, M.C.,Minasov, G.,Onopriyenko, O.,Sidiq, K.,Stogios, P.J.,Anderson, W.F.,Daniel, R.A.,Savchenko, A.,Vollmer, W.,Lewis, R.J. Structure of the LdcB LD-Carboxypeptidase Reveals the Molecular Basis of Peptidoglycan Recognition. Structure 2014 22 949 960 4JH1 24004181 Crystal Structure of FosB from Bacillus cereus with Zinc and Sulfate at 1.55 A Resolution -SAD Phasing 2013-03-04 2013-10-02 Thompson, M.K.,Keithly, M.E.,Harp, J.,Cook, P.D.,Jagessar, K.L.,Sulikowski, G.A.,Armstrong, R.N. Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus. Biochemistry 2013 52 7350 7362 4JH2 24004181 Crystal Structure of FosB from Bacillus cereus with Zinc and Sulfate at 1.27 A Resolution 2013-03-04 2013-10-02 Thompson, M.K.,Keithly, M.E.,Harp, J.,Cook, P.D.,Jagessar, K.L.,Sulikowski, G.A.,Armstrong, R.N. Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus. Biochemistry 2013 52 7350 7362 4JH3 24004181 Crystal Structure of FosB from Bacillus cereus with Zinc and Fosfomycin 2013-03-04 2013-10-02 Thompson, M.K.,Keithly, M.E.,Harp, J.,Cook, P.D.,Jagessar, K.L.,Sulikowski, G.A.,Armstrong, R.N. Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus. Biochemistry 2013 52 7350 7362 4JH4 24004181 Crystal Structure of FosB from Bacillus cereus with Nickel and Fosfomycin 2013-03-04 2013-10-02 Thompson, M.K.,Keithly, M.E.,Harp, J.,Cook, P.D.,Jagessar, K.L.,Sulikowski, G.A.,Armstrong, R.N. Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus. Biochemistry 2013 52 7350 7362 4JH5 24004181 Crystal Structure of FosB from Bacillus cereus with Cobalt and Fosfomycin 2013-03-04 2013-10-02 Thompson, M.K.,Keithly, M.E.,Harp, J.,Cook, P.D.,Jagessar, K.L.,Sulikowski, G.A.,Armstrong, R.N. Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus. Biochemistry 2013 52 7350 7362 4JH6 24004181 Crystal Structure of FosB from Bacillus cereus with Manganese and Fosfomycin 2013-03-04 2013-10-02 Thompson, M.K.,Keithly, M.E.,Harp, J.,Cook, P.D.,Jagessar, K.L.,Sulikowski, G.A.,Armstrong, R.N. Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus. Biochemistry 2013 52 7350 7362 4JH7 24004181 Crystal Structure of FosB from Bacillus cereus with Manganese and L-Cysteine-Fosfomycin Product 2013-03-04 2013-10-02 Thompson, M.K.,Keithly, M.E.,Harp, J.,Cook, P.D.,Jagessar, K.L.,Sulikowski, G.A.,Armstrong, R.N. Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus. Biochemistry 2013 52 7350 7362 4JH8 24004181 Crystal Structure of FosB from Bacillus cereus with Zinc and L-Cysteine-Fosfomycin Ternary Complex 2013-03-04 2013-10-02 Thompson, M.K.,Keithly, M.E.,Harp, J.,Cook, P.D.,Jagessar, K.L.,Sulikowski, G.A.,Armstrong, R.N. Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus. Biochemistry 2013 52 7350 7362 4JH9 24004181 Crystal Structure of FosB from Bacillus cereus with Maganese and Potential BSH-Fosfomycin Product 2013-03-04 2013-10-02 Thompson, M.K.,Keithly, M.E.,Harp, J.,Cook, P.D.,Jagessar, K.L.,Sulikowski, G.A.,Armstrong, R.N. Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus. Biochemistry 2013 52 7350 7362 4MQG Structure of Carbonmonoxy Adult Hemoglobin Bristol-Alesha alphawtbetaV67M 2013-09-16 2013-10-02 Soman, J.,Olson, J.S. Structure of Carbonmonoxy Adult Hemoglobin Bristol-Alesha alphawtbetaV67M To be Published 0 0 0 0 4MQI Structure of Aquomet Hemoglobin Bristol-Alesha alphawtbetaV67M 2013-09-16 2013-10-02 Soman, J.,Olson, J.S. Structure of Aquomet Hemoglobin Bristol-Alesha alphawtbetaV67M To be Published 0 0 0 0 4MQJ Structure of Wild-type Fetal Human Hemoglobin HbF 2013-09-16 2013-10-02 Soman, J.,Olson, J.S. Structure of Wild-type Fetal Human Hemoglobin HbF To be Published 0 0 0 0 4MUR 24711382 Crystal structure of vancomycin resistance D,D-dipeptidase/D,D-pentapeptidase VanXYc D59S mutant 2013-09-23 2013-10-02 Meziane-Cherif, D.,Stogios, P.J.,Evdokimova, E.,Savchenko, A.,Courvalin, P. Structural basis for the evolution of vancomycin resistance D,D-peptidases. Proc.Natl.Acad.Sci.USA 2014 111 5872 5877 4I9R 24059243 Crystal Structure of the R111K:R132L:Y134F:T54V:R59W:A32W Mutant of the Cellular Retinoic Acid Binding Protein Type II in Complex with All-Trans Retinal at 2.6 Angstrom Resolution 2012-12-05 2013-10-09 Berbasova, T.,Nosrati, M.,Vasileiou, C.,Wang, W.,Lee, K.S.,Yapici, I.,Geiger, J.H.,Borhan, B. Rational Design of a Colorimetric pH Sensor from a Soluble Retinoic Acid Chaperone. J.Am.Chem.Soc. 2013 135 16111 16119 4LOG 24069298 The crystal structure of the orphan nuclear receptor PNR ligand binding domain fused with MBP 2013-07-12 2013-10-09 Tan, M.H.,Zhou, X.E.,Soon, F.F.,Li, X.,Li, J.,Yong, E.L.,Melcher, K.,Xu, H.E. The Crystal Structure of the Orphan Nuclear Receptor NR2E3/PNR Ligand Binding Domain Reveals a Dimeric Auto-Repressed Conformation. Plos One 2013 8 0 0 4M6S 24059243 Crystal structure of the R111K:R132Y:Y134F:T54V:R59W:A32W mutant of the Cellular Retinoic Acid Binding Protein Type II in complex with All-Trans Retinal at 2.38 Angstrom Resolution 2013-08-10 2013-10-09 Berbasova, T.,Nosrati, M.,Vasileiou, C.,Wang, W.,Lee, K.S.,Yapici, I.,Geiger, J.H.,Borhan, B. Rational Design of a Colorimetric pH Sensor from a Soluble Retinoic Acid Chaperone. 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Chembiochem 2013 14 2127 2135 4GYE 24128815 MDR 769 HIV-1 Protease in Complex with Reduced P1F 2012-09-05 2013-10-30 Dewdney, T.G.,Wang, Y.,Liu, Z.,Sharma, S.K.,Reiter, S.J.,Brunzelle, J.S.,Kovari, I.A.,Woster, P.M.,Kovari, L.C. Ligand modifications to reduce the relative resistance of multi-drug resistant HIV-1 protease. Bioorg.Med.Chem. 2013 21 7430 7434 4GZF 24128815 Multi-drug resistant HIV-1 protease 769 variant with reduced LrF peptide 2012-09-06 2013-10-30 Dewdney, T.G.,Wang, Y.,Liu, Z.,Sharma, S.K.,Reiter, S.J.,Brunzelle, J.S.,Kovari, I.A.,Woster, P.M.,Kovari, L.C. Ligand modifications to reduce the relative resistance of multi-drug resistant HIV-1 protease. Bioorg.Med.Chem. 2013 21 7430 7434 4MQK Carbonmonoxy Structure of the Human Fetal Hemoglobin Mutant HbF Toms River alphawtgammaV67M 2013-09-16 2013-10-30 Soman, J.,Olson, J.S. 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TO BE PUBLISHED 0 0 0 0 4LUO 24147804 Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions 2013-07-25 2013-12-11 Frank, A.O.,Feldkamp, M.D.,Kennedy, J.P.,Waterson, A.G.,Pelz, N.F.,Patrone, J.D.,Vangamudi, B.,Camper, D.V.,Rossanese, O.W.,Chazin, W.J.,Fesik, S.W. Discovery of a potent inhibitor of replication protein a protein-protein interactions using a fragment-linking approach. J.Med.Chem. 2013 56 9242 9250 4LUV 24147804 Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions 2013-07-25 2013-12-11 Frank, A.O.,Feldkamp, M.D.,Kennedy, J.P.,Waterson, A.G.,Pelz, N.F.,Patrone, J.D.,Vangamudi, B.,Camper, D.V.,Rossanese, O.W.,Chazin, W.J.,Fesik, S.W. Discovery of a potent inhibitor of replication protein a protein-protein interactions using a fragment-linking approach. J.Med.Chem. 2013 56 9242 9250 4LUZ 24147804 Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions 2013-07-25 2013-12-11 Frank, A.O.,Feldkamp, M.D.,Kennedy, J.P.,Waterson, A.G.,Pelz, N.F.,Patrone, J.D.,Vangamudi, B.,Camper, D.V.,Rossanese, O.W.,Chazin, W.J.,Fesik, S.W. Discovery of a potent inhibitor of replication protein a protein-protein interactions using a fragment-linking approach. J.Med.Chem. 2013 56 9242 9250 4LW1 24147804 Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions 2013-07-26 2013-12-11 Frank, A.O.,Feldkamp, M.D.,Kennedy, J.P.,Waterson, A.G.,Pelz, N.F.,Patrone, J.D.,Vangamudi, B.,Camper, D.V.,Rossanese, O.W.,Chazin, W.J.,Fesik, S.W. Discovery of a potent inhibitor of replication protein a protein-protein interactions using a fragment-linking approach. J.Med.Chem. 2013 56 9242 9250 4LWC 24147804 Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions 2013-07-26 2013-12-11 Frank, A.O.,Feldkamp, M.D.,Kennedy, J.P.,Waterson, A.G.,Pelz, N.F.,Patrone, J.D.,Vangamudi, B.,Camper, D.V.,Rossanese, O.W.,Chazin, W.J.,Fesik, S.W. Discovery of a potent inhibitor of replication protein a protein-protein interactions using a fragment-linking approach. J.Med.Chem. 2013 56 9242 9250 4MNH 24239091 Structure of the DP10.7 TCR 2013-09-10 2013-12-18 Luoma, A.M.,Castro, C.D.,Mayassi, T.,Bembinster, L.A.,Bai, L.,Picard, D.,Anderson, B.,Scharf, L.,Kung, J.E.,Sibener, L.V.,Savage, P.B.,Jabri, B.,Bendelac, A.,Adams, E.J. Crystal Structure of V delta 1 T Cell Receptor in Complex with CD1d-Sulfatide Shows MHC-like Recognition of a Self-Lipid by Human gamma delta T Cells. 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Kinetics, Structure, and Mechanism of 8-Oxo-7,8-dihydro-2'-deoxyguanosine Bypass by Human DNA Polymerase eta J.Biol.Chem. 2014 289 16867 16882 4O3O 24759104 Crystal structure of human polymerase eta inserting datp opposite an 8-oxog containing dna template 2013-12-18 2014-04-30 Patra, A.,Nagy, L.D.,Zhang, Q.,Su, Y.,Muller, L.,Guengerich, F.P.,Egli, M. Kinetics, Structure, and Mechanism of 8-Oxo-7,8-dihydro-2'-deoxyguanosine Bypass by Human DNA Polymerase eta J.Biol.Chem. 2014 289 16867 16882 4JXS 24835785 X-ray crystal structure of AmpC beta-lactamase from E. coli in complex with a non-covalent inhibitor 3-[(4-CARBOXYBENZYL)SULFAMOYL]THIOPHENE-2-CARBOXYLIC ACID (compound 4) 2013-03-28 2014-05-07 Hendershot, J.M.,Mishra, U.J.,Smart, R.P.,Schroeder, W.,Powers, R.A. Structure-based efforts to optimize a non-beta-lactam inhibitor of AmpC beta-lactamase. 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Structural and biochemical analyses of the catalysis and potency impact of inhibitor phosphoribosylation by human nicotinamide phosphoribosyltransferase. Chembiochem 2014 15 1121 1130 4PI0 24942740 Crystal structure of particulate methane monooxygenase from Methylocystis sp. ATCC 49242 (Rockwell) soaked in copper 2014-05-07 2014-06-25 Sirajuddin, S.,Barupala, D.,Helling, S.,Marcus, K.,Stemmler, T.L.,Rosenzweig, A.C. Effects of zinc on particulate methane monooxygenase activity and structure. J.Biol.Chem. 2014 289 21782 21794 4QEC 24866416 ElxO with NADP Bound 2014-05-15 2014-07-02 Ortega, M.A.,Velasquez, J.E.,Garg, N.,Zhang, Q.,Joyce, R.E.,Nair, S.K.,van der Donk, W.A. Substrate Specificity of the Lanthipeptide Peptidase ElxP and the Oxidoreductase ElxO. Acs Chem.Biol. 2014 9 1718 1725 4QED 24866416 ElxO Y152F with NADPH Bound 2014-05-15 2014-07-02 Ortega, M.A.,Velasquez, J.E.,Garg, N.,Zhang, Q.,Joyce, R.E.,Nair, S.K.,van der Donk, W.A. Substrate Specificity of the Lanthipeptide Peptidase ElxP and the Oxidoreductase ElxO. Acs Chem.Biol. 2014 9 1718 1725 4QL5 Crystal structure of translation initiation factor IF-1 from Streptococcus pneumoniae TIGR4 2014-06-10 2014-07-02 Stogios, P.J.,Wawrzak, Z.,Onopriyenko, O.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) Crystal structure of translation initiation factor IF-1 from Streptococcus pneumoniae TIGR4 TO BE PUBLISHED 0 0 0 0 4O41 24813446 Amide linked RNA 2013-12-18 2014-07-09 Mutisya, D.,Selvam, C.,Lunstad, B.D.,Pallan, P.S.,Haas, A.,Leake, D.,Egli, M.,Rozners, E. Amides are excellent mimics of phosphate internucleoside linkages and are well tolerated in short interfering RNAs. Nucleic Acids Res. 2014 42 6542 6551 4QDU 25028518 Crystal structure of Antigen 85C co-crystallized with ebselen 2014-05-14 2014-07-09 Favrot, L.,Lajiness, D.H.,Ronning, D.R. Inactivation of the Mycobacterium tuberculosis Antigen 85 Complex by Covalent, Allosteric Inhibitors. J.Biol.Chem. 2014 289 25031 25040 4LW9 Crystal structure of Vibrio cholera major pseudopilin EpsG 2013-07-26 2014-07-16 Vago, F.S.,Raghunathan, K.,Jens, J.C.,Wedemeyer, W.J.,Bagdasarian, M.,Brunzelle, J.S.,Arvidson, D.N. Crystal structure of Vibrio cholera major pseudopilin EpsG To be Published 0 0 0 0 4NPV Crystal structure of human PDE1B bound to inhibitor 7A (6,7,8-trimethoxy-N-(pentan-3-yl)quinazolin-4-amine) 2013-11-22 2014-07-16 Humphrey, J.M.,Yang, E.X.,Am Ende, C.W.,Arnold, E.P.,Head, J.L.,Jenkinsonb, S.,Lebel, L.A.,Liras, S.,Pandit, J.,Samas, B.,Vajdos, F.,Simons, S.P.,Evdokimova, A.,Mansour, M.,Menniti, F.S. Small-molecule phosphodiesterase probes: discovery of potent and selective CNS-penetrable quinazoline inhibitors of PDE1 MEDCHEMCOMM 2014 0 0 0 4NPW Crystal structure of human PDE1B bound to inhibitor 19A (7,8-dimethoxy-N-[(2S)-1-(3-methyl-1H-pyrazol-5-yl)propan-2-yl]quinazolin-4-amine) 2013-11-22 2014-07-16 Humphrey, J.M.,Yang, E.X.,Am Ende, C.W.,Arnold, E.P.,Head, J.L.,Jenkinsonb, S.,Lebel, L.A.,Liras, S.,Pandit, J.,Samas, B.,Vajdos, F.,Simons, S.P.,Evdokimova, A.,Mansour, M.,Menniti, F.S. Small-molecule phosphodiesterase probes: discovery of potent and selective CNS-penetrable quinazoline inhibitors of PDE1 MEDCHEMCOMM 2014 0 0 0 4OUR 24982198 Crystal structure of Arabidopsis thaliana phytochrome B photosensory module 2014-02-18 2014-07-16 Burgie, E.S.,Bussell, A.N.,Walker, J.M.,Dubiel, K.,Vierstra, R.D. Crystal structure of the photosensing module from a red/far-red light-absorbing plant phytochrome. Proc.Natl.Acad.Sci.USA 2014 111 10179 10184 4QUS 1.28 Angstrom resolution crystal structure of predicted acyltransferase with acyl-CoA N-acyltransferase domain (ypeA) from Escherichia coli str. K-12 substr. MG1655 2014-07-11 2014-07-23 Halavaty, A.S.,Filippova, E.V.,Minasov, G.,Flores, K.J.,Dubrovska, I.,Shuvalova, L.,Anderson, W.F. 1.28 Angstrom resolution crystal structure of predicted acyltransferase with acyl-CoA N-acyltransferase domain (ypeA) from Escherichia coli str. K-12 substr. MG1655 To be Published 0 0 0 0 4QVT Crystal structure of predicted N-acyltransferase (ypeA) in complex with acetyl-CoA from Escherichia coli 2014-07-15 2014-07-30 Filippova, E.V.,Minasov, G.,Winsor, G.,Dubrovska, I.,Shuvalova, L.,Wolfe, A.J.,Anderson, W.F. Crystal structure of predicted N-acyltransferase (ypeA) in complex with acetyl-CoA from Escherichia coli To be Published 0 0 0 0 4NWV 25136116 Crystal structure of Orsay virus-like particle 2013-12-06 2014-08-20 Guo, Y.R.,Hryc, C.F.,Jakana, J.,Jiang, H.,Wang, D.,Chiu, W.,Zhong, W.,Tao, Y.J. Crystal structure of a nematode-infecting virus. Proc.Natl.Acad.Sci.USA 2014 111 12781 12786 4U43 25139565 MAP4K4 in complex with inhibitor (compound 6) 2014-07-23 2014-09-03 Wang, L.,Stanley, M.,Boggs, J.W.,Crawford, T.D.,Bravo, B.J.,Giannetti, A.M.,Harris, S.F.,Magnuson, S.R.,Nonomiya, J.,Schmidt, S.,Wu, P.,Ye, W.,Gould, S.E.,Murray, L.J.,Ndubaku, C.O.,Chen, H. Fragment-based identification and optimization of a class of potent pyrrolo[2,1-f][1,2,4]triazine MAP4K4 inhibitors. Bioorg.Med.Chem.Lett. 2014 24 4546 4552 4M6V 25157442 Structure of the carboxyl transferase domain from Rhizobium etli pyruvate carboxylase with pyruvate and biocytin 2013-08-11 2014-09-10 Lietzan, A.D.,Lin, Y.,St.Maurice, M. The role of biotin and oxamate in the carboxyltransferase reaction of pyruvate carboxylase. Arch.Biochem.Biophys. 2014 0 70 79 4R7K 1.88 Angstrom Resolution Crystal Structure of Hypothetical Protein jhp0584 from Helicobacter pylori. 2014-08-27 2014-09-10 Minasov, G.,Shuvalova, L.,Dubrovska, I.,Flores, K.,Shatsman, S.,Kwon, K.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.88 Angstrom Resolution Crystal Structure of Hypothetical Protein jhp0584 from Helicobacter pylori. To be Published 0 0 0 0 4LZL Structure of the inactive form of the regulatory domain from the repressor of iron transport regulator (RitR) 2013-07-31 2014-09-17 Maule, A.F.,Weiner, J.J.,Han, L.,Wright, D.P.,Peterson, F.C.,Volkman, B.F.,Silvaggi, N.R.,Ulijasz, A.T. Defining the Aspartate-Less Receiver (ALR) Domains: Structure and Activation of RitR from Streptococcus pneumoniae To be Published 0 0 0 0 4WED Crystal structure of ABC transporter substrate-binding protein from Sinorhizobium meliloti 2014-09-09 2014-09-24 Shabalin, I.G.,Handing, K.B.,Minor, W. Crystal structure of ABC transporter substrate-binding protein from Sinorhizobium meliloti to be published 0 0 0 0 4WEO Crystal Structure of a Putative acetoin(Diacetyl) Reductase Burkholderia cenocepacia 2014-09-10 2014-09-24 Seattle Structural Genomics Center for Infectious Disease (SSGCID),Dranow, D.M.,Fairman, J.W.,Lorimer, D.,Edwards, T.E. Crystal Structure of a Putative acetoin(Diacetyl) Reductase Burkholderia cenocepacia to be published 0 0 0 0 4O8G 25253687 Structure of Infrared Fluorescent Protein 1.4 2013-12-27 2014-10-01 Bhattacharya, S.,Auldridge, M.E.,Lehtivuori, H.,Ihalainen, J.A.,Forest, K.T. Origins of fluorescence in evolved bacteriophytochromes. J.Biol.Chem. 2014 289 32144 32152 4P1B 25248368 CRYSTAL STRUCTURE OF THE TOLUENE 4-MONOOXYGENASE HYDROXYLASE-FERREDOXIN C7S E16C C84A C85A VARIANT ELECTRON-TRANSFER COMPLEX 2014-02-25 2014-10-01 Acheson, J.F.,Bailey, L.J.,Elsen, N.L.,Fox, B.G. Structural basis for biomolecular recognition in overlapping binding sites in a diiron enzyme system. Nat Commun 2014 5 5009 5009 4PKA 25248161 Crystal structure of patatin aged with diisopropylphosphorofluoridate 2014-05-14 2014-10-01 Wijeyesakere, S.J.,Richardson, R.J.,Stuckey, J.A. Crystal Structure of Patatin-17 in Complex with Aged and Non-Aged Organophosphorus Compounds. Plos One 2014 9 0 0 4QMG 25242325 The Structure of MTDH-SND1 Complex Reveals Novel Cancer-Promoting Interactions 2014-06-16 2014-10-08 Guo, F.,Wan, L.,Zheng, A.,Stanevich, V.,Wei, Y.,Satyshur, K.A.,Shen, M.,Lee, W.,Kang, Y.,Xing, Y. Structural Insights into the Tumor-Promoting Function of the MTDH-SND1 Complex. Cell Rep 2014 8 1704 1713 4RFB 1.93 Angstrom Crystal Structure of Superantigen-like Protein from Staphylococcus aureus in Complex with Sialyl-Lewis X. 2014-09-25 2014-10-08 Minasov, G.,Nocadello, S.,Shuvalova, L.,Filippova, E.V.,Halavaty, A.,Dubrovska, I.,Bagnoli, F.,Falugi, F.,Bottomley, M.,Grandi, G.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) 1.93 Angstrom Crystal Structure of Superantigen-like Protein from Staphylococcus aureus in Complex with Sialyl-Lewis X. TO BE PUBLISHED 0 0 0 0 4NW7 24998378 PDE4 catalytic domain 2013-12-05 2014-10-15 Hagen, T.J.,Mo, X.,Burgin, A.B.,Fox, D.,Zhang, Z.,Gurney, M.E. Discovery of triazines as selective PDE4B versus PDE4D inhibitors. Bioorg.Med.Chem.Lett. 2014 24 4031 4034 4QJ4 25435326 Structure of a fragment of human phospholipase C-beta3 delta472-569, bound to IP3 and in complex with Galphaq 2014-06-03 2014-10-22 Lyon, A.M.,Begley, J.A.,Manett, T.D.,Tesmer, J.J. Molecular mechanisms of phospholipase C beta 3 autoinhibition. Structure 2014 22 1844 1854 4QJ5 25435326 Structure of a fragment of human phospholipase C-beta3 delta472-581, bound to IP3 and in complex with Galphaq 2014-06-03 2014-10-22 Lyon, A.M.,Begley, J.A.,Manett, T.D.,Tesmer, J.J. Molecular mechanisms of phospholipase C beta 3 autoinhibition. Structure 2014 22 1844 1854 4KEN Crystal Structure of AmpC beta-lactamase N152G Mutant in Complex with Cefoxitin 2013-04-25 2014-10-29 Docter, B.E.,Baggett, V.L.,Powers, R.A.,Wallar, B.J. Complexed structures of AmpC beta-lactamase To be Published 0 0 0 0 4KG5 Crystal Structure of AmpC beta-lactamase N152G Mutant in Complex with Cefotaxime 2013-04-28 2014-10-29 Docter, B.E.,Baggett, V.L.,Powers, R.A.,Wallar, B.J. Complexed structures of AmpC beta-lactamase To be Published 0 0 0 0 4QBU 25340352 Structure of the Acyl Transferase domain of ZmaA 2014-05-08 2014-11-05 Park, H.,Kevany, B.M.,Dyer, D.H.,Thomas, M.G.,Forest, K.T. A Polyketide Synthase Acyltransferase Domain Structure Suggests a Recognition Mechanism for Its Hydroxymalonyl-Acyl Carrier Protein Substrate. Plos One 2014 9 0 0 4PG1 25222710 Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound 2014-05-01 2014-11-19 Buer, B.C.,Paul, B.,Das, D.,Stuckey, J.A.,Marsh, E.N. Insights into substrate and metal binding from the crystal structure of cyanobacterial aldehyde deformylating oxygenase with substrate bound. Acs Chem.Biol. 2014 9 2584 2593 4R4C 25699140 Structure of RPA70N in complex with 5-(4-((4-(5-carboxyfuran-2-yl)-2-chlorobenzamido)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid 2014-08-19 2014-11-19 Waterson, A.G.,Kennedy, J.P.,Patrone, J.D.,Pelz, N.F.,Feldkamp, M.D.,Frank, A.O.,Vangamudi, B.,Souza-Fagundes, E.M.,Rossanese, O.W.,Chazin, W.J.,Fesik, S.W. Diphenylpyrazoles as replication protein a inhibitors. ACS Med Chem Lett 2015 6 140 145 4R4I 25699140 Structure of RPA70N in complex with 5-(4-((6-(5-carboxyfuran-2-yl)-1-thioxo-3,4-dihydroisoquinolin-2(1H)-yl)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid 2014-08-19 2014-11-19 Waterson, A.G.,Kennedy, J.P.,Patrone, J.D.,Pelz, N.F.,Feldkamp, M.D.,Frank, A.O.,Vangamudi, B.,Souza-Fagundes, E.M.,Rossanese, O.W.,Chazin, W.J.,Fesik, S.W. Diphenylpyrazoles as replication protein a inhibitors. ACS Med Chem Lett 2015 6 140 145 4R4O 25699140 Crystal structure of RPA70N in complex with 5-(4-((4-(5-carboxyfuran-2-yl)benzyl)carbamothioyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid 2014-08-19 2014-11-19 Waterson, A.G.,Kennedy, J.P.,Patrone, J.D.,Pelz, N.F.,Feldkamp, M.D.,Frank, A.O.,Vangamudi, B.,Souza-Fagundes, E.M.,Rossanese, O.W.,Chazin, W.J.,Fesik, S.W. Diphenylpyrazoles as replication protein a inhibitors. ACS Med Chem Lett 2015 6 140 145 4R4Q 25699140 Crystal structure of RPA70N in complex with 5-(3-((N-(4-(5-carboxyfuran-2-yl)benzyl)acetamido)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid 2014-08-19 2014-11-19 Waterson, A.G.,Kennedy, J.P.,Patrone, J.D.,Pelz, N.F.,Feldkamp, M.D.,Frank, A.O.,Vangamudi, B.,Souza-Fagundes, E.M.,Rossanese, O.W.,Chazin, W.J.,Fesik, S.W. Diphenylpyrazoles as replication protein a inhibitors. ACS Med Chem Lett 2015 6 140 145 4R4T 25699140 Crystal Structure of RPA70N in complex with 5-(4-((4-(5-carboxyfuran-2-yl)phenylthioamido)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid 2014-08-19 2014-11-19 Waterson, A.G.,Kennedy, J.P.,Patrone, J.D.,Pelz, N.F.,Feldkamp, M.D.,Frank, A.O.,Vangamudi, B.,Souza-Fagundes, E.M.,Rossanese, O.W.,Chazin, W.J.,Fesik, S.W. Diphenylpyrazoles as replication protein a inhibitors. ACS Med Chem Lett 2015 6 140 145 4OF9 25372675 Structure of K42N variant of sperm whale myoglobin 2014-01-14 2014-11-26 Wang, C.,Lovelace, L.L.,Sun, S.,Dawson, J.H.,Lebioda, L. Structures of K42N and K42Y sperm whale myoglobins point to an inhibitory role of distal water in peroxidase activity. Acta Crystallogr.,Sect.D 2014 70 2833 2839 4PG0 25222710 Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound 2014-05-01 2014-11-26 Buer, B.C.,Paul, B.,Das, D.,Stuckey, J.A.,Marsh, E.N. Insights into substrate and metal binding from the crystal structure of cyanobacterial aldehyde deformylating oxygenase with substrate bound. Acs Chem.Biol. 2014 9 2584 2593 4WVL 25397901 Structure-Guided DOT1L Probe Optimization by Label-Free Ligand Displacement 2014-11-06 2014-12-03 Yi, J.S.,Federation, A.J.,Qi, J.,Dhe-Paganon, S.,Hadler, M.,Xu, X.,St Pierre, R.,Varca, A.C.,Wu, L.,Marineau, J.J.,Smith, W.B.,Souza, A.,Chory, E.J.,Armstrong, S.A.,Bradner, J.E. Structure-Guided DOT1L Probe Optimization by Label-Free Ligand Displacement. Acs Chem.Biol. 2015 10 667 674 4QYP 25478840 The Crystal Structures of holo-wt human Cellular Retinol Binding protein II (hCRBPII) bound to Retinal 2014-07-25 2014-12-10 Nossoni, Z.,Assar, Z.,Yapici, I.,Nosrati, M.,Wang, W.,Berbasova, T.,Vasileiou, C.,Borhan, B.,Geiger, J. Structures of holo wild-type human cellular retinol-binding protein II (hCRBPII) bound to retinol and retinal. Acta Crystallogr.,Sect.D 2014 70 3226 3232 4QZT 25478840 Crystal Structure of wild type Human Cellular Retinol Binding Protein II (hCRBPII) bound to retinol at 7 KeV beam energy 2014-07-28 2014-12-10 Nossoni, Z.,Assar, Z.,Yapici, I.,Nosrati, M.,Wang, W.,Berbasova, T.,Vasileiou, C.,Borhan, B.,Geiger, J. Structures of holo wild-type human cellular retinol-binding protein II (hCRBPII) bound to retinol and retinal. Acta Crystallogr.,Sect.D 2014 70 3226 3232 4QZU 25478840 Crystal Structure of wild type Human Cellular Retinol Binding Protein II (hCRBPII) bound to retinol at 11 KeV beam energy 2014-07-28 2014-12-10 Nossoni, Z.,Assar, Z.,Yapici, I.,Nosrati, M.,Wang, W.,Berbasova, T.,Vasileiou, C.,Borhan, B.,Geiger, J. Structures of holo wild-type human cellular retinol-binding protein II (hCRBPII) bound to retinol and retinal. Acta Crystallogr.,Sect.D 2014 70 3226 3232 4RED 25412657 Crystal structure of human AMPK alpha1 KD-AID with K43A mutation 2014-09-22 2014-12-10 Li, X.,Wang, L.,Zhou, X.E.,Ke, J.,de Waal, P.W.,Gu, X.,Tan, M.H.,Wang, D.,Wu, D.,Xu, H.E.,Melcher, K. Structural basis of AMPK regulation by adenine nucleotides and glycogen. Cell Res. 2015 25 50 66 4REW 25412657 Crystal structure of the non-phosphorylated human alpha1 beta2 gamma1 holo-AMPK complex 2014-09-24 2014-12-10 Li, X.,Wang, L.,Zhou, X.E.,Ke, J.,de Waal, P.W.,Gu, X.,Tan, M.H.,Wang, D.,Wu, D.,Xu, H.E.,Melcher, K. Structural basis of AMPK regulation by adenine nucleotides and glycogen. Cell Res. 2015 25 50 66 4OY3 23148563 Crystal Structure of the Helicobacter pylori MTAN-D198N mutant with S-Adenosylhomocysteine in the active site 2014-02-10 2014-12-17 Mishra, V.,Ronning, D.R. Crystal structures of the Helicobacter pylori MTAN enzyme reveal specific interactions between S-adenosylhomocysteine and the 5'-alkylthio binding subsite. Biochemistry 2012 51 9763 9772 4NS2 27646786 Crystal structure of Horse heart ferric myoglobin; D44K/D60K/E85K mutant 2013-11-27 2014-12-24 Trana, E.N.,Nocek, J.M.,Woude, J.V.,Span, I.,Smith, S.M.,Rosenzweig, A.C.,Hoffman, B.M. Charge-Disproportionation Symmetry Breaking Creates a Heterodimeric Myoglobin Complex with Enhanced Affinity and Rapid Intracomplex Electron Transfer. J.Am.Chem.Soc. 2016 138 12615 12628 4O4V Crystal Structure of Trichomonas vaginalis Triosephosphate Isomerase Tvag_497370 (Ile-45 variant) 2013-12-19 2014-12-24 Lara-Gonzalez, S.,Benitez-Cardoza, C.G.,Brieba, L.G. Engineering mutants with altered dimer-monomer equilibrium reveal the existence of stable monomeric Triosephosphate isomerases To be Published 0 0 0 0 4O57 Crystal Structure of Trichomonas vaginalis Triosephosphate Isomerase Ile45-Tyr mutant (Tvag_497370) 2013-12-19 2014-12-24 Lara-Gonzalez, S.,Estrella-Hernandez, P.,Montero-Moran, G.M.,Benitez-Cardoza, C.G.,Brieba, L.G. Engineering mutants with altered dimer-monomer equilibrium reveal the existence of stable monomeric Triosephosphate isomerases To be Published 0 0 0 0 4NZ9 Crystal Structure of FabI from S. aureus in complex with a novel benzimidazole inhibitor 2013-12-11 2014-12-31 Mehboob, S.,Truong, L.,Santarsiero, B.D.,Johnson, M.E. To be published To be Published 0 0 0 0 4QYN 25478840 The Crystal Structures of holo-wt human Cellular Retinol Binding protein II (hCRBPII) bound to Retinol 2014-07-24 2014-12-31 Nossoni, Z.,Assar, Z.,Yapici, I.,Nosrati, M.,Wang, W.,Berbasova, T.,Vasileiou, C.,Borhan, B.,Geiger, J. Structures of holo wild-type human cellular retinol-binding protein II (hCRBPII) bound to retinol and retinal. Acta Crystallogr.,Sect.D 2014 70 3226 3232 4R1Z 25533464 Zebra fish cytochrome P450 17A1 with Abiraterone 2014-08-08 2014-12-31 Pallan, P.S.,Nagy, L.D.,Lei, L.,Gonzalez, E.,Kramlinger, V.M.,Azumaya, C.M.,Wawrzak, Z.,Waterman, M.R.,Guengerich, F.P.,Egli, M. Structural and Kinetic Basis of Steroid 17 alpha, 20-Lyase Activity in Teleost Fish Cytochrome P450 17A1 and Its Absence in Cytochrome P450 17A2. J.Biol.Chem. 2015 290 3248 3268 4R20 25533464 Zebra fish cytochrome P450 17A2 with Abiraterone 2014-08-08 2014-12-31 Pallan, P.S.,Nagy, L.D.,Lei, L.,Gonzalez, E.,Kramlinger, V.M.,Azumaya, C.M.,Wawrzak, Z.,Waterman, M.R.,Guengerich, F.P.,Egli, M. Structural and Kinetic Basis of Steroid 17 alpha, 20-Lyase Activity in Teleost Fish Cytochrome P450 17A1 and Its Absence in Cytochrome P450 17A2. J.Biol.Chem. 2015 290 3248 3268 4XAD Crystal structure of hen egg white lysozyme in complex with Galf-GlcNAc 2014-12-14 2014-12-31 Wangkanont, K.,Kiessling, L.L. 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J.Med.Chem. 2016 59 7856 7876 5KZT Listeria monocytogenes OppA bound to peptide 2016-07-25 2016-08-10 Light, S.H.,Whiteley, A.T.,Minasov, G.,Portnoy, D.A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases Listeria monocytogenes OppA bound to peptide To Be Published 0 0 0 0 5IN4 27434622 Crystal Structure of GDP-mannose 4,6 dehydratase bound to a GDP-fucose based inhibitor 2016-03-07 2016-08-17 Allen, J.G.,Mujacic, M.,Frohn, M.J.,Pickrell, A.J.,Kodama, P.,Bagal, D.,San Miguel, T.,Sickmier, E.A.,Osgood, S.,Swietlow, A.,Li, V.,Jordan, J.B.,Kim, K.W.,Rousseau, A.C.,Kim, Y.J.,Caille, S.,Achmatowicz, M.,Thiel, O.,Fotsch, C.H.,Reddy, P.,McCarter, J.D. Facile Modulation of Antibody Fucosylation with Small Molecule Fucostatin Inhibitors and Cocrystal Structure with GDP-Mannose 4,6-Dehydratase. Acs Chem.Biol. 2016 11 2734 2743 5KZH 27636561 High Resolution Structure of Acinetobacter baumannii beta-lactamase OXA-51 2016-07-25 2016-08-17 June, C.M.,Muckenthaler, T.J.,Schroder, E.C.,Klamer, Z.L.,Wawrzak, Z.,Powers, R.A.,Szarecka, A.,Leonard, D.A. The structure of a doripenem-bound OXA-51 class D beta-lactamase variant with enhanced carbapenemase activity. Protein Sci. 2016 25 2152 2163 5D00 27454321 Crystal structure of BshA from B. subtilis complexed with N-acetylglucosaminyl-malate and UMP 2015-08-01 2016-09-07 Winchell, K.R.,Egeler, P.W.,VanDuinen, A.J.,Jackson, L.B.,Karpen, M.E.,Cook, P.D. A Structural, Functional, and Computational Analysis of BshA, the First Enzyme in the Bacillithiol Biosynthesis Pathway. Biochemistry 2016 55 4654 4665 5D01 27454321 Crystal structure of BshA from B. subtilis complexed with N-acetylglucosaminyl-malate 2015-08-02 2016-09-07 Winchell, K.R.,Egeler, P.W.,VanDuinen, A.J.,Jackson, L.B.,Karpen, M.E.,Cook, P.D. A Structural, Functional, and Computational Analysis of BshA, the First Enzyme in the Bacillithiol Biosynthesis Pathway. Biochemistry 2016 55 4654 4665 5EJ3 27387012 Crystal structure of XlnB2 2015-11-01 2016-09-07 Gagne, D.,Narayanan, C.,Nguyen-Thi, N.,Roux, L.D.,Bernard, D.N.,Brunzelle, J.S.,Couture, J.F.,Agarwal, P.K.,Doucet, N. Ligand Binding Enhances Millisecond Conformational Exchange in Xylanase B2 from Streptomyces lividans. Biochemistry 2016 55 4184 4196 5DF5 The structure of oxidized rat cytochrome c (T28E) at 1.30 angstroms resolution. 2015-08-26 2016-09-14 Edwards, B.F.P.,Mahapatra, G.,Vaishnav, A.A.,Brunzelle, J.S.,Huttemann, M. The structure of oxidized rat cytochrome c (T28E) at 1.30 angstroms resolution. To Be Published 0 0 0 0 5DPQ 27524203 Crystal Structure of E72A mutant of domain swapped dimer Human Cellular Retinol Binding Protein 2015-09-14 2016-09-14 Assar, Z.,Nossoni, Z.,Wang, W.,Santos, E.M.,Kramer, K.,McCornack, C.,Vasileiou, C.,Borhan, B.,Geiger, J.H. 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Science 2017 355 0 0 5KCI 27633552 Crystal Structure of HTC1 2016-06-06 2016-09-21 Horowitz, S.,Koepnick, B.,Martin, R.,Tymieniecki, A.,Winburn, A.A.,Cooper, S.,Flatten, J.,Rogawski, D.S.,Koropatkin, N.M.,Hailu, T.T.,Jain, N.,Koldewey, P.,Ahlstrom, L.S.,Chapman, M.R.,Sikkema, A.P.,Skiba, M.A.,Maloney, F.P.,Beinlich, F.R.,Popovic, Z.,Baker, D.,Khatib, F.,Bardwell, J.C. Determining crystal structures through crowdsourcing and coursework. Nat Commun 2016 7 12549 12549 5KKO A 1.55A X-Ray Structure from Vibrio cholerae O1 biovar El Tor of a Hypothetical Protein 2016-06-22 2016-09-21 Brunzelle, J.S.,Wawrzak, Z.,Skarina, T.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) A 1.55A X-Ray Structure from Vibrio cholerae O1 biovar El Tor of a Hypothetical Protein To Be Published 0 0 0 0 5KKO A 1.55A X-Ray Structure from Vibrio cholerae O1 biovar El Tor of a Hypothetical Protein 2016-06-22 2016-09-21 Brunzelle, J.S.,Wawrzak, Z.,Skarina, T.,Savchenko, A.,Anderson, W.F.,Center for Structural Genomics of Infectious Diseases (CSGID) A 1.55A X-Ray Structure from Vibrio cholerae O1 biovar El Tor of a Hypothetical Protein To Be Published 0 0 0 0 5KSO 27605430 hMiro1 C-domain GDP-Pi Complex P3121 Crystal Form 2016-07-08 2016-09-21 Klosowiak, J.L.,Park, S.,Smith, K.P.,French, M.E.,Focia, P.J.,Freymann, D.M.,Rice, S.E. 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Sci Rep 2016 6 33019 33019 5SWM 27611889 BACILLUS HALODURANS RNASE H MUTANT D132N IN COMPLEX WITH 12-MER FRNA/DNA HYBRID 2016-08-08 2016-09-21 Pallan, P.S.,Prakash, T.P.,de Leon, A.R.,Egli, M. Limits of RNA 2'-OH Mimicry by Fluorine: Crystal Structure of Bacillus halodurans RNase H Bound to a 2'-FRNA:DNA Hybrid. Biochemistry 2016 55 5321 5325 5L1J 27694439 Crystal Structure of Human DNA Polymerase Eta Inserting dTMPNPP Opposite O6-Methyl-2'-deoxyguanosine 2016-07-29 2016-10-05 Patra, A.,Zhang, Q.,Guengerich, F.P.,Egli, M. Mechanisms of Insertion of dCTP and dTTP Opposite the DNA Lesion O6-Methyl-2'-deoxyguanosine by Human DNA Polymerase eta. J.Biol.Chem. 2016 291 24304 24313 4YQM 27703239 Glutathione S-transferase Omega 1 bound to covalent inhibitor C1-27 2015-03-13 2016-10-12 Ramkumar, K.,Samanta, S.,Kyani, A.,Yang, S.,Tamura, S.,Ziemke, E.,Stuckey, J.A.,Li, S.,Chinnaswamy, K.,Otake, H.,Debnath, B.,Yarovenko, V.,Sebolt-Leopold, J.S.,Ljungman, M.,Neamati, N. 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Structural dynamics of UDP-galactopyranose mutase from Mycobacterium smegmatis to be published 0 0 0 0 5F58 Crystal structure of the Q108K:K40L:T51V:R58F mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.54 Angstrom Resolution 2015-12-04 2016-12-07 Nossoni, Z.,Nosrati, M.,Wang, W.,Berbasova, T.,Vasileiou, C.,Borhan, B.,Geiger, J.H. Crystal structure of the Q108K:K40L:T51V:R58F mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.54 Angstrom Resolution To Be Published 0 0 0 0 5F7G Crystal structure of the Q108K:K40L:T51V:R58Y:Y19W:Q38L mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal at 1.48 Angstrom Resolution 2015-12-08 2016-12-14 Nossoni, Z.,Nosrati, M.,Wang, W.,Berbasova, T.,Vasileiou, C.,Borhan, B.,Geiger, J.H. 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Acta Crystallogr.,Sect.F 2020 76 372 383 6PPP 32518066 Structure of S. pombe Lsm2-8 with processed U6 snRNA 2019-07-08 2020-06-17 Montemayor, E.J.,Virta, J.M.,Hayes, S.M.,Nomura, Y.,Brow, D.A.,Butcher, S.E. Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes. Rna 2020 26 1400 1413 6PPQ 32518066 Structure of S. pombe Lsm1-7 with RNA, polyuridine with 3' adenosine 2019-07-08 2020-06-17 Montemayor, E.J.,Virta, J.M.,Hayes, S.M.,Nomura, Y.,Brow, D.A.,Butcher, S.E. Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes. Rna 2020 26 1400 1413 6PPV 32518066 Structure of S. pombe Lsm1-7 with RNA, polyuridine with 3' guanosine 2019-07-08 2020-06-17 Montemayor, E.J.,Virta, J.M.,Hayes, S.M.,Nomura, Y.,Brow, D.A.,Butcher, S.E. Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes. Rna 2020 26 1400 1413 6V0A 32518164 Crystal structure of cytochrome c nitrite reductase from the bacterium Geobacter lovleyi with bound sulfate 2019-11-18 2020-06-17 Campecino, J.,Lagishetty, S.,Wawrzak, Z.,Sosa Alfaro, V.,Lehnert, N.,Reguera, G.,Hu, J.,Hegg, E.L. Cytochromecnitrite reductase from the bacteriumGeobacter lovleyirepresents a new NrfA subclass. J.Biol.Chem. 2020 295 11455 11465 6WNB 32532989 Structure of the Rieske non-heme iron oxygenase SxtT with dideoxysaxitoxin bound 2020-04-22 2020-06-17 Lukowski, A.L.,Liu, J.,Bridwell-Rabb, J.,Narayan, A.R.H. Structural basis for divergent C-H hydroxylation selectivity in two Rieske oxygenases. Nat Commun 2020 11 2991 2991 6WNC 32532989 Structure of the Rieske non-heme iron oxygenase GxtA 2020-04-22 2020-06-17 Lukowski, A.L.,Liu, J.,Bridwell-Rabb, J.,Narayan, A.R.H. Structural basis for divergent C-H hydroxylation selectivity in two Rieske oxygenases. 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Biochemistry 2020 59 2562 2575 6KI0 33431827 Crystal Structure of Human ASC-CARD 2019-07-16 2020-07-22 Xu, Z.,Zhou, Y.,Liu, M.,Ma, H.,Sun, L.,Zahid, A.,Chen, Y.,Zhou, R.,Cao, M.,Wu, D.,Zhao, W.,Li, B.,Jin, T. Homotypic CARD-CARD interaction is critical for the activation of NLRP1 inflammasome. Cell Death Dis 2021 12 57 57 6WPA 32510324 Structure of AvaR1 bound to DNA half-site 2020-04-26 2020-07-22 Kapoor, I.,Olivares, P.,Nair, S.K. Biochemical basis for the regulation of biosynthesis of antiparasitics by bacterial hormones. Elife 2020 9 0 0 6PZ7 33454012 GH5-4 broad specificity endoglucanase from Clostridium acetobutylicum 2019-07-31 2020-08-05 Glasgow, E.M.,Kemna, E.I.,Bingman, C.A.,Ing, N.,Deng, K.,Bianchetti, C.M.,Takasuka, T.E.,Northen, T.R.,Fox, B.G. A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis. 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Crystal structure of YopT domain of Pasteurella Multocida PfhB2-Toxin To Be Published 0 0 0 0 6WA9 33048983 Structure of the Chlamydia pneumoniae CdsV and CdsO protein complex 2020-03-24 2020-09-30 Jensen, J.L.,Yamini, S.,Rietsch, A.,Spiller, B.W. ""The structure of the Type III secretion system export gate with CdsO, an ATPase lever arm"". Plos Pathog. 2020 16 0 0 6UK5 Structure of SAM bound CalS10, an amino pentose methyltransferase from Micromonospora echinaspora involved in calicheamicin biosynthesis 2019-10-04 2020-10-07 Alvarado, S.K.,Miller, M.D.,Xu, W.,Wang, Z.,Van Lanen, S.G.,Thorson, J.S.,Phillips Jr., G.N. 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Proc.Natl.Acad.Sci.USA 2021 118 0 0 6W58 33059303 hPGDS complexed with an aza-quinoline 2020-03-12 2020-11-04 Cadilla, R.,Deaton, D.N.,Do, Y.,Elkins, P.A.,Ennulat, D.,Guss, J.H.,Holt, J.,Jeune, M.R.,King, A.G.,Klapwijk, J.C.,Kramer, H.F.,Kramer, N.J.,Laffan, S.B.,Masuria, P.I.,McDougal, A.V.,Mortenson, P.N.,Musetti, C.,Peckham, G.E.,Pietrak, B.L.,Poole, C.,Price, D.J.,Rendina, A.R.,Sati, G.,Saxty, G.,Shearer, B.G.,Shewchuk, L.M.,Sneddon, H.F.,Stewart, E.L.,Stuart, J.D.,Thomas, D.N.,Thomson, S.A.,Ward, P.,Wilson, J.W.,Xu, T.,Youngman, M.A. The exploration of aza-quinolines as hematopoietic prostaglandin D synthase (H-PGDS) inhibitors with low brain exposure. Bioorg.Med.Chem. 2020 28 115791 115791 6UWW Crystal structure of dihydrofolate reductase from Mycobacterium ulcerans with P218 inhibitor 2019-11-05 2020-11-11 Mayclin, S.J.,Abendroth, J.A.,Lorimer, D.D.,Horanyi, P.S.,Edwards, T.E. Crystal structure of dihydrofolate reductase from Mycobacterium ulcerans with SDDC-0001565 inhibitor to be published 0 0 0 0 6V04 34605436 DynU16 crystal structure, a putative protein in the dynemicin biosynthetic locus 2019-11-18 2020-11-18 Alvarado, S.K.,Miller, M.D.,Bhardwaj, M.,Thorson, J.S.,Van Lanen, S.G.,Phillips Jr., G.N. Structural characterization of DynU16, a START/Bet v1-like protein involved in dynemicin biosynthesis. Acta Crystallogr.,Sect.F 2021 77 328 333 6VEM 32990754 Structure of RNA octamer 2020-01-02 2020-11-18 Mikami, A.,Erande, N.,Matsuda, S.,Kel'in, A.,Woods, L.B.,Chickering, T.,Pallan, P.S.,Schlegel, M.K.,Zlatev, I.,Egli, M.,Manoharan, M. Synthesis, chirality-dependent conformational and biological properties of siRNAs containing 5'-(R)- and 5'-(S)-C-methyl-guanosine. Nucleic Acids Res. 2020 48 10101 10124 6WQP 33454012 GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis 2020-04-29 2020-11-18 Glasgow, E.M.,Kemna, E.I.,Bingman, C.A.,Ing, N.,Deng, K.,Bianchetti, C.M.,Takasuka, T.E.,Northen, T.R.,Fox, B.G. A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis. J.Biol.Chem. 2020 295 17752 17769 7JSL 33175491 Crystal structure of the DNA binding domain of human transcription factor ERF in the oxidized form, in complex with double-stranded DNA ACCGGAAGTG 2020-08-14 2020-11-25 Hou, C.,McCown, C.,Ivanov, D.N.,Tsodikov, O.V. Structural Insight into the DNA Binding Function of Transcription Factor ERF. Biochemistry 2020 0 0 0 6V8C Design, Synthesis, and Mechanism of Fluorine-substituted Cyclohexene Analogues of GAMA-Aminobutyric Acid (GABA) as Selective Ornithine Aminotransferase Inactivators 2019-12-10 2020-12-16 Zhu, W.,Doubleday, P.T.,Catlin, D.S.,Weerawarna, P.,Butrin, A.,Shen, S.,Kelleher, N.L.,Liu, D.,Silverman, R.B. Design, Synthesis, and Mechanism of Fluorine-substituted Cyclohexene Analogues of GAMA-Aminobutyric Acid (GABA) as Selective Ornithine Aminotransferase Inactivators To Be Published 0 0 0 0 6V8D Design, Synthesis, and Mechanism of Fluorine-substituted Cyclohexene Analogues of GAMA-Aminobutyric Acid (GABA) as Selective Ornithine Aminotransferase Inactivators 2019-12-10 2020-12-16 Zhu, W.,Doubleday, P.T.,Catlin, D.S.,Weerawarna, P.,Butrin, A.,Shen, S.,Kelleher, N.L.,Liu, D.,Silverman, R.B. Design, Synthesis, and Mechanism of Fluorine-substituted Cyclohexene Analogues of GAMA-Aminobutyric Acid (GABA) as Selective Ornithine Aminotransferase Inactivators To Be Published 0 0 0 0 6XJ1 33357436 Crystal Structure of CDC15 F-BAR Domain from Schizosaccharomyces pombe 2020-06-22 2020-12-16 Snider, C.E.,Chandra, M.,McDonald, N.A.,Willet, A.H.,Collier, S.E.,Ohi, M.D.,Jackson, L.P.,Gould, K.L. Opposite Surfaces of the Cdc15 F-BAR Domain Create a Membrane Platform That Coordinates Cytoskeletal and Signaling Components for Cytokinesis. Cell Rep 2020 33 108526 108526 6VBS The C2 Crystal form of SodCI Superoxide Dismutase at 1.7 A resolution with 6 molecules in the asymmetric unit. 2019-12-19 2020-12-30 Newhouse, P.W.,Satyshur, K.A.,Slauch, J.M.,Forest, K.T. Structure and Muropeptide Binding of the Virulence Factor Superoxide Dismutase C1 from Salmonella Typhimurium To Be Published 0 0 0 0 6VBT The P212121 Crystal structure of SodCI Superoxide Dismutase with 2 molecules in the asymmetric unit at 1.7 A resolution 2019-12-19 2020-12-30 Newhouse, P.W.,Satyshur, K.A.,Slauch, J.M.,Forest, K.T. Structure and Muropeptide Binding of the Virulence Factor Superoxide Dismutase C1 from Salmonella Typhimurium To Be Published 0 0 0 0 6VBX 33797903 Crystal structure of Mcl-1 in complex with 138E12 peptide, Lys-covalent antagonist 2019-12-19 2020-12-30 Gambini, L.,Udompholkul, P.,Baggio, C.,Muralidharan, A.,Kenjic, N.,Assar, Z.,Perry, J.J.P.,Pellecchia, M. Design, Synthesis, and Structural Characterization of Lysine Covalent BH3 Peptides Targeting Mcl-1. J.Med.Chem. 2021 64 4903 4912 6X9H 33564124 Molecular mechanism and structural basis of small-molecule modulation of acid-sensing ion channel 1 (ASIC1) 2020-06-02 2020-12-30 Liu, Y.,Ma, J.,DesJarlais, R.L.,Hagan, R.,Rech, J.,Lin, D.,Liu, C.,Miller, R.,Schoellerman, J.,Luo, J.,Letavic, M.,Grasberger, B.,Maher, M. Molecular mechanism and structural basis of small-molecule modulation of the gating of acid-sensing ion channel 1. Commun Biol 2021 4 174 174 7JX9 33316155 The crystal structure of human ornithine aminotransferase with an intermediate bound during inactivation by (1S,3S)-3-amino-4-(hexafluoropropan-2-ylidenyl)-cyclopentane-1-carboxylic acid. 2020-08-26 2021-01-06 Butrin, A.,Beaupre, B.A.,Kadamandla, N.,Zhao, P.,Shen, S.,Silverman, R.B.,Moran, G.R.,Liu, D. Structural and Kinetic Analyses Reveal the Dual Inhibition Modes of Ornithine Aminotransferase by (1 S ,3 S )-3-Amino-4-(hexafluoropropan-2-ylidenyl)-cyclopentane-1-carboxylic Acid (BCF 3 ). Acs Chem.Biol. 2021 16 67 75 7L6R 34131072 Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA2m)pUpUpApApA (Cap-1), S-Adenosyl-L-homocysteine (SAH) and Manganese (Mn). 2020-12-23 2021-01-06 Minasov, G.,Rosas-Lemus, M.,Shuvalova, L.,Inniss, N.L.,Brunzelle, J.S.,Daczkowski, C.M.,Hoover, P.,Mesecar, A.D.,Satchell, K.J.F. Mn 2+ coordinates Cap-0-RNA to align substrates for efficient 2'- O -methyl transfer by SARS-CoV-2 nsp16. Sci.Signal. 2021 14 0 0 7L6T 34131072 Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA2m)pUpUpApApA (Cap-1), S-Adenosyl-L-homocysteine (SAH) and two Magnesium (Mg) ions. 2020-12-23 2021-01-06 Minasov, G.,Rosas-Lemus, M.,Shuvalova, L.,Inniss, N.L.,Brunzelle, J.S.,Daczkowski, C.M.,Hoover, P.,Mesecar, A.D.,Satchell, K.J.F. Mn 2+ coordinates Cap-0-RNA to align substrates for efficient 2'- O -methyl transfer by SARS-CoV-2 nsp16. Sci.Signal. 2021 14 0 0 6WGU 33199623 Mycobacterium tuberculosis pduO-type ATP:cobalamin adenosyltransferase 2020-04-06 2021-01-20 Mascarenhas, R.,Ruetz, M.,McDevitt, L.,Koutmos, M.,Banerjee, R. Mobile loop dynamics in adenosyltransferase control binding and reactivity of coenzyme B 12 . Proc.Natl.Acad.Sci.USA 2020 117 30412 30422 6WGV 33199623 Mycobacterium tuberculosis pduO-type ATP:cobalamin adenosyltransferase bound to adenosylcobalamin and PPPi 2020-04-06 2021-01-20 Mascarenhas, R.,Ruetz, M.,McDevitt, L.,Koutmos, M.,Banerjee, R. Mobile loop dynamics in adenosyltransferase control binding and reactivity of coenzyme B 12 . Proc.Natl.Acad.Sci.USA 2020 117 30412 30422 6WH5 33199623 Mycobacterium tuberculosis pduO-type ATP:cobalamin adenosyltransferase bound to cob(II)alamin and PPPi 2020-04-07 2021-01-20 Mascarenhas, R.,Ruetz, M.,McDevitt, L.,Koutmos, M.,Banerjee, R. Mobile loop dynamics in adenosyltransferase control binding and reactivity of coenzyme B 12 . Proc.Natl.Acad.Sci.USA 2020 117 30412 30422 7JV7 33431688 Crystal Structure of the yeast RNA Pol II CTD kinase CTDK-1 complex 2020-08-20 2021-01-27 Xie, Y.,Lord, C.L.,Clarke, B.P.,Ivey, A.L.,Hill, P.S.,McDonald, W.H.,Wente, S.R.,Ren, Y. Structure and activation mechanism of the yeast RNA Pol II CTD kinase CTDK-1 complex. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7LHJ Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with 15-cis-retinal 2021-01-25 2021-02-10 Ehyaei, N.,Geiger, J.H.,Borhan, B. 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Biorxiv 2021 0 0 0 7LLZ 33594371 SARS-CoV-2 papain-like protease (PLpro) bound to inhibitor XR8-69 2021-02-04 2021-02-24 Shen, Z.,Ratia, K.,Cooper, L.,Kong, D.,Lee, H.,Kwon, Y.,Li, Y.,Alqarni, S.,Huang, F.,Dubrovskyi, O.,Rong, L.,Thatcher, G.R.,Xiong, R. Potent, Novel SARS-CoV-2 PLpro Inhibitors Block Viral Replication in Monkey and Human Cell Cultures. Biorxiv 2021 0 0 0 7LOS 33594371 SARS-CoV-2 papain-like protease (PLpro) bound to inhibitor XR8-65 2021-02-10 2021-02-24 Shen, Z.,Ratia, K.,Cooper, L.,Kong, D.,Lee, H.,Kwon, Y.,Li, Y.,Alqarni, S.,Huang, F.,Dubrovskyi, O.,Rong, L.,Thatcher, G.R.,Xiong, R. Potent, Novel SARS-CoV-2 PLpro Inhibitors Block Viral Replication in Monkey and Human Cell Cultures. Biorxiv 2021 0 0 0 6WE4 33705687 Human PARP14 (ARTD8), catalytic fragment in complex with compound 2 2020-04-01 2021-03-24 Schenkel, L.B.,Molina, J.R.,Swinger, K.K.,Abo, R.,Blackwell, D.J.,Lu, A.Z.,Cheung, A.E.,Church, W.D.,Kunii, K.,Kuplast-Barr, K.G.,Majer, C.R.,Minissale, E.,Mo, J.R.,Niepel, M.,Reik, C.,Ren, Y.,Vasbinder, M.M.,Wigle, T.J.,Richon, V.M.,Keilhack, H.,Kuntz, K.W. A potent and selective PARP14 inhibitor decreases protumor macrophage gene expression and elicits inflammatory responses in tumor explants. Cell Chem Biol 2021 28 1158 0 7JTZ 33436318 Yeast Glo3 GAP domain 2020-08-18 2021-03-24 Xie, B.,Jung, C.,Chandra, M.,Engel, A.,Kendall, A.K.,Jackson, L.P. The Glo3 GAP crystal structure supports the molecular niche model for ArfGAPs in COPI coats. Adv Biol Regul 2021 79 100781 100781 6UG1 34428697 Sequence impact in DNA duplex opening by the Rad4/XPC nucleotide excision repair complex 2019-09-25 2021-03-31 Paul, D.,Mu, H.,Tavakoli, A.,Dai, Q.,Chakraborty, S.,He, C.,Ansari, A.,Broyde, S.,Min, J.H. Impact of DNA sequences on DNA 'opening' by the Rad4/XPC nucleotide excision repair complex. DNA Repair (Amst) 2021 107 103194 103194 7BU5 Crystal Structure of Human SLX4 and MUS81 2020-04-04 2021-04-07 Wan, B.,Wu, J.,Lei, M. SLX4 control MUS81 endonuclease function in telomere through an intermolecular SAP domain To be published 0 0 0 0 7LJU 33755421 Porcine Dihydropyrimidine Dehydrogenase (DPD) crosslinked with 5-Ethynyluracil (5EU) 2021-01-30 2021-04-07 Forouzesh, D.C.,Beaupre, B.A.,Butrin, A.,Wawrzak, Z.,Liu, D.,Moran, G.R. The Interaction of Porcine Dihydropyrimidine Dehydrogenase with the Chemotherapy Sensitizer: 5-Ethynyluracil. Biochemistry 2021 60 1120 1132 7LHM Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A:Q38L mutant of cellular retinol binding protein II complex with all-trans-retinal 2021-01-25 2021-04-14 Ehyaei, N.,Geiger, J.H.,Borhan, B. Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A:Q38L mutant of cellular retinol binding protein II complex with all-trans-retinal To Be Published 0 0 0 0 7LHN Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with all-trans-retinal after exposure to visible light 2021-01-25 2021-04-14 Ehyaei, N.,Geiger, J.H.,Borhan, B. Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with all-trans-retinal after exposure to visible light To Be Published 0 0 0 0 7LHO Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with all-trans-retinal in the dark 2021-01-26 2021-04-14 Ehyaei, N.,Geiger, J.H.,Borhan, B. Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with all-trans-retinal in the dark To Be Published 0 0 0 0 6WH6 32787249 Crystal structure of human sulfide quinone oxidoreductase in complex with coenzyme Q (cyanide soaked) 2020-04-07 2021-04-21 Landry, A.P.,Moon, S.,Bonanata, J.,Cho, U.S.,Coitino, E.L.,Banerjee, R. Dismantling and Rebuilding the Trisulfide Cofactor Demonstrates Its Essential Role in Human Sulfide Quinone Oxidoreductase. J.Am.Chem.Soc. 2020 142 14295 14306 6WNK 33949190 Macrocyclic peptides TDI5575 that selectively inhibit the Mycobacterium tuberculosis proteasome 2020-04-22 2021-04-28 Zhang, H.,Hsu, H.C.,Kahne, S.C.,Hara, R.,Zhan, W.,Jiang, X.,Burns-Huang, K.,Ouellette, T.,Imaeda, T.,Okamoto, R.,Kawasaki, M.,Michino, M.,Wong, T.T.,Toita, A.,Yukawa, T.,Moraca, F.,Vendome, J.,Saha, P.,Sato, K.,Aso, K.,Ginn, J.,Meinke, P.T.,Foley, M.,Nathan, C.F.,Darwin, K.H.,Li, H.,Lin, G. Macrocyclic Peptides that Selectively Inhibit the Mycobacterium tuberculosis Proteasome. J.Med.Chem. 2021 64 6262 6272 7CNL 33850002 Crystal structure of TEAD3 in complex with VT105 2020-08-01 2021-04-28 Tang, T.T.,Konradi, A.W.,Feng, Y.,Peng, X.,Ma, M.,Li, J.,Yu, F.X.,Guan, K.L.,Post, L. Small Molecule Inhibitors of TEAD Auto-palmitoylation Selectively Inhibit Proliferation and Tumor Growth of NF2 -deficient Mesothelioma. Mol.Cancer Ther. 2021 20 986 998 7MI0 33620038 Crystal Structure of Glycosyltransferase from Rickettsia africae ESF-5 2021-04-16 2021-04-28 Rodarte, J.V.,Abendroth, J.,Edwards, T.E.,Lorimer, D.D.,Staker, B.L.,Zhang, S.,Myler, P.J.,McLaughlin, K.J. Crystal structure of acetoacetyl-CoA reductase from Rickettsia felis. Acta Crystallogr.,Sect.F 2021 77 54 60 6WQ1 33932340 Eukaryotic LanCL2 protein 2020-04-28 2021-05-05 Lai, K.Y.,Galan, S.R.G.,Zeng, Y.,Zhou, T.H.,He, C.,Raj, R.,Riedl, J.,Liu, S.,Chooi, K.P.,Garg, N.,Zeng, M.,Jones, L.H.,Hutchings, G.J.,Mohammed, S.,Nair, S.K.,Chen, J.,Davis, B.G.,van der Donk, W.A. LanCLs add glutathione to dehydroamino acids generated at phosphorylated sites in the proteome. Cell 2021 184 2680 0 6WTP 34110416 Human JAK2 JH1 domain in complex with PROTAC-intermediate linker handle 3 2020-05-03 2021-05-05 Chang, Y.,Min, J.,Jarusiewicz, J.A.,Actis, M.,Yu-Chen Bradford, S.,Mayasundari, A.,Yang, L.,Chepyala, D.,Alcock, L.J.,Roberts, K.G.,Nithianantham, S.,Maxwell, D.,Rowland, L.,Larsen, R.,Seth, A.,Goto, H.,Imamura, T.,Akahane, K.,Hansen, B.S.,Pruett-Miller, S.M.,Paietta, E.M.,Litzow, M.R.,Qu, C.,Yang, J.J.,Fischer, M.,Rankovic, Z.,Mullighan, C.G. Degradation of Janus kinases in CRLF2-rearranged acute lymphoblastic leukemia. Blood 2021 138 2313 2326 7LJX 33916826 Oxidized rat cytochrome c mutant (K53Q) 2021-02-01 2021-05-12 Bazylianska, V.,Kalpage, H.A.,Wan, J.,Vaishnav, A.,Mahapatra, G.,Turner, A.A.,Chowdhury, D.D.,Kim, K.,Morse, P.T.,Lee, I.,Brunzelle, J.S.,Polin, L.,Subedi, P.,Heath, E.I.,Podgorski, I.,Marcus, K.,Edwards, B.F.P.,Huttemann, M. Lysine 53 Acetylation of Cytochrome c in Prostate Cancer: Warburg Metabolism and Evasion of Apoptosis. Cells 2021 10 0 0 7LYG 33953197 Zika virus RNA promoter stem-loop A with tRNA-scaffold 2021-03-06 2021-05-12 Lee, E.,Bujalowski, P.J.,Teramoto, T.,Gottipati, K.,Scott, S.D.,Padmanabhan, R.,Choi, K.H. Structures of flavivirus RNA promoters suggest two binding modes with NS5 polymerase. Nat Commun 2021 12 2530 2530 6X58 33676924 MPER-Fluc-Ec2 bound to 10E8v4 antibody 2020-05-25 2021-05-19 McIlwain, B.C.,Erwin, A.L.,Davis, A.R.,Ben Koff, B.,Chang, L.,Bylund, T.,Chuang, G.Y.,Kwong, P.D.,Ohi, M.D.,Lai, Y.T.,Stockbridge, R.B. N-terminal Transmembrane-Helix Epitope Tag for X-ray Crystallography and Electron Microscopy of Small Membrane Proteins. 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Proc.Natl.Acad.Sci.USA 2021 118 0 0 6XJJ Structure of non-heme iron enzyme TropC: Radical tropolone biosynthesis 2020-06-24 2021-06-02 Doyon, T.J.,Skinner, K.,Yang, D.,Mallik, L.,Wymore, T.,Koutmos, M.,Zimmerman, P.M.,Narayan, A. Radical Tropolone Biosynthesis Chemrxiv 2020 0 0 0 7M31 34032117 Dihydropyrimidine Dehydrogenase (DPD) C671S Mutant Soaked with Thymine and NADPH Anaerobically 2021-03-18 2021-06-09 Beaupre, B.A.,Forouzesh, D.C.,Butrin, A.,Liu, D.,Moran, G.R. Perturbing the Movement of Hydrogens to Delineate and Assign Events in the Reductive Activation and Turnover of Porcine Dihydropyrimidine Dehydrogenase. Biochemistry 2021 60 1764 1775 7M32 34032117 Dihydropyrimidine Dehydrogenase (DPD) C671A Mutant Soaked with Uracil and NADPH Anaerobically 2021-03-18 2021-06-09 Beaupre, B.A.,Forouzesh, D.C.,Butrin, A.,Liu, D.,Moran, G.R. 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Nat Commun 2022 13 3526 3526 7SNU 35181340 Crystal structure of ShHTL7 from Striga hermonthica in complex with strigolactone antagonist RG6 2021-10-28 2022-07-06 Arellano-Saab, A.,McErlean, C.S.P.,Lumba, S.,Savchenko, A.,Stogios, P.J.,McCourt, P. A novel strigolactone receptor antagonist provides insights into the structural inhibition, conditioning, and germination of the crop parasite Striga. J.Biol.Chem. 2022 298 101734 101734 7RNQ 36068220 Holo structure of engineered TrpB, 2B9-H275E, from Pyrococcus furiosus in the extended-open conformation 2021-07-29 2022-08-03 McDonald, A.D.,Higgins, P.M.,Buller, A.R. Substrate multiplexed protein engineering facilitates promiscuous biocatalytic synthesis. Nat Commun 2022 13 5242 5242 7ROF 36068220 Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB2B9-H275E with L-Trp non-covalently bound 2021-07-30 2022-08-03 McDonald, A.D.,Higgins, P.M.,Buller, A.R. Substrate multiplexed protein engineering facilitates promiscuous biocatalytic synthesis. Nat Commun 2022 13 5242 5242 7VOA 35906408 Crystal structure of SARS-CoV-2 RBD in complex with aRBD5 2021-10-13 2022-08-10 Ma, H.,Zhang, X.,Zheng, P.,Dube, P.H.,Zeng, W.,Chen, S.,Cheng, Q.,Yang, Y.,Wu, Y.,Zhou, J.,Hu, X.,Xiang, Y.,Zhang, H.,Chiu, S.,Jin, T. Hetero-bivalent nanobodies provide broad-spectrum protection against SARS-CoV-2 variants of concern including Omicron. Cell Res. 2022 32 831 842 7UCY 36113427 Integrin alpha IIB beta3 complex with gantofiban 2022-03-17 2022-08-17 Lin, F.Y.,Li, J.,Xie, Y.,Zhu, J.,Huong Nguyen, T.T.,Zhang, Y.,Zhu, J.,Springer, T.A. A general chemical principle for creating closure-stabilizing integrin inhibitors. Cell 2022 185 3533 0 7RUI Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with XR844 2021-08-17 2022-08-24 Xiong, R.,Ratia, K.M.,Li, Y.,Shen, Z.,Zhao, J.,Huang, F.,Dubrovyskyii, O.,Thatcher, G.R. Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with XR844 To Be Published 0 0 0 0 8DKN 36179791 PPARg bound to T0070907 and Co-R peptide 2022-07-05 2022-09-07 Irwin, S.,Karr, C.,Furman, C.,Tsai, J.,Gee, P.,Banka, D.,Wibowo, A.S.,Dementiev, A.A.,O'Shea, M.,Yang, J.,Lowe, J.,Mitchell, L.,Ruppel, S.,Fekkes, P.,Zhu, P.,Korpal, M.,Larsen, N.A. Biochemical and structural basis for the pharmacological inhibition of nuclear hormone receptor PPAR gamma by inverse agonists. J.Biol.Chem. 2022 298 102539 102539 8DSY 36179791 PPARg bound to inverse agonist H3B-343 2022-07-24 2022-09-07 Irwin, S.,Karr, C.,Furman, C.,Tsai, J.,Gee, P.,Banka, D.,Wibowo, A.S.,Dementiev, A.A.,O'Shea, M.,Yang, J.,Lowe, J.,Mitchell, L.,Ruppel, S.,Fekkes, P.,Zhu, P.,Korpal, M.,Larsen, N.A. Biochemical and structural basis for the pharmacological inhibition of nuclear hormone receptor PPAR gamma by inverse agonists. J.Biol.Chem. 2022 298 102539 102539 8DSZ 36179791 PPARg bound to partial agonist H3B-487 2022-07-24 2022-09-07 Irwin, S.,Karr, C.,Furman, C.,Tsai, J.,Gee, P.,Banka, D.,Wibowo, A.S.,Dementiev, A.A.,O'Shea, M.,Yang, J.,Lowe, J.,Mitchell, L.,Ruppel, S.,Fekkes, P.,Zhu, P.,Korpal, M.,Larsen, N.A. Biochemical and structural basis for the pharmacological inhibition of nuclear hormone receptor PPAR gamma by inverse agonists. J.Biol.Chem. 2022 298 102539 102539 7UX8 36173166 Crystal structure of MfnG, an L- and D-tyrosine O-methyltransferase from the marformycin biosynthesis pathway of Streptomyces drozdowiczii, with SAH and L-Tyrosine bound at 1.4 A resolution (P212121 - form II) 2022-05-05 2022-09-28 Wu, K.L.,Moore, J.A.,Miller, M.D.,Chen, Y.,Lee, C.,Xu, W.,Peng, Z.,Duan, Q.,Phillips Jr., G.N.,Uribe, R.A.,Xiao, H. Expanding the eukaryotic genetic code with a biosynthesized 21st amino acid. Protein Sci. 2022 31 0 0 7UX6 36173166 Crystal structure of MfnG, an L- and D-tyrosine O-methyltransferase from the marformycin biosynthesis pathway of Streptomyces drozdowiczii, with SAH bound at 1.35 A resolution (P212121 - form I) 2022-05-05 2022-10-12 Wu, K.L.,Moore, J.A.,Miller, M.D.,Chen, Y.,Lee, C.,Xu, W.,Peng, Z.,Duan, Q.,Phillips Jr., G.N.,Uribe, R.A.,Xiao, H. Expanding the eukaryotic genetic code with a biosynthesized 21st amino acid. Protein Sci. 2022 31 0 0 7UX7 36173166 Crystal structure of MfnG, an L- and D-tyrosine O-methyltransferase from the marformycin biosynthesis pathway of Streptomyces drozdowiczii, with SAH bound at 1.2 A resolution (P212121 - form II) 2022-05-05 2022-10-12 Wu, K.L.,Moore, J.A.,Miller, M.D.,Chen, Y.,Lee, C.,Xu, W.,Peng, Z.,Duan, Q.,Phillips Jr., G.N.,Uribe, R.A.,Xiao, H. Expanding the eukaryotic genetic code with a biosynthesized 21st amino acid. Protein Sci. 2022 31 0 0 7U4F 36307418 Neuraminidase from influenza virus A/Moscow/10/1999(H3N2) 2022-02-28 2022-10-19 Lei, R.,Tan, T.J.C.,Hernandez Garcia, A.,Wang, Y.,Diefenbacher, M.,Teo, C.,Gopan, G.,Tavakoli Dargani, Z.,Teo, Q.W.,Graham, C.S.,Brooke, C.B.,Nair, S.K.,Wu, N.C. Prevalence and mechanisms of evolutionary contingency in human influenza H3N2 neuraminidase. Nat Commun 2022 13 6443 6443 7U4G 36307418 Neuraminidase from influenza virus A/Shandong/9/1993(H3N2) 2022-02-28 2022-10-19 Lei, R.,Tan, T.J.C.,Hernandez Garcia, A.,Wang, Y.,Diefenbacher, M.,Teo, C.,Gopan, G.,Tavakoli Dargani, Z.,Teo, Q.W.,Graham, C.S.,Brooke, C.B.,Nair, S.K.,Wu, N.C. Prevalence and mechanisms of evolutionary contingency in human influenza H3N2 neuraminidase. Nat Commun 2022 13 6443 6443 7U6P 36188294 Structure of an intellectual disability-associated ornithine decarboxylase variant G84R 2022-03-04 2022-10-19 Zhou, X.E.,Schultz, C.R.,Suino Powell, K.,Henrickson, A.,Lamp, J.,Brunzelle, J.S.,Demeler, B.,Vega, I.E.,Bachmann, A.S.,Melcher, K. Structure and Enzymatic Activity of an Intellectual Disability-Associated Ornithine Decarboxylase Variant, G84R. Acs Omega 2022 7 34665 34675 7U6U 36188294 Structure of an intellectual disability-associated ornithine decarboxylase variant G84R in complex with PLP 2022-03-06 2022-10-19 Zhou, X.E.,Schultz, C.R.,Suino Powell, K.,Henrickson, A.,Lamp, J.,Brunzelle, J.S.,Demeler, B.,Vega, I.E.,Bachmann, A.S.,Melcher, K. Structure and Enzymatic Activity of an Intellectual Disability-Associated Ornithine Decarboxylase Variant, G84R. Acs Omega 2022 7 34665 34675 8D6K 36157042 Sco GlgEI-V279S in complex with cyclohexyl carbasugar 2022-06-06 2022-10-19 Thanvi, R.,Jayasinghe, T.D.,Kapil, S.,Obadawo, B.S.,Ronning, D.R.,Sucheck, S.J. Synthesis of C 7 /C 8 -cyclitols and C 7 N-aminocyclitols from maltose and X-ray crystal structure of Streptomyces coelicolor GlgEI V279S in a complex with an amylostatin GXG-like derivative. Front Chem 2022 10 950433 950433 7SFZ Crystal structure of Mis18a-yippee domain 2021-10-04 2022-10-26 Park, S.H.,Shimanaka, K.,Cho, U. Structural Basis for Mis18 Complex Assembly: Implications for Centromere Maintenance To Be Published 0 0 0 0 7MKT 36352138 Crystal structure of r(GU)11G-NMM complex 2021-04-26 2022-11-02 Roschdi, S.,Yan, J.,Nomura, Y.,Escobar, C.A.,Petersen, R.J.,Bingman, C.A.,Tonelli, M.,Vivek, R.,Montemayor, E.J.,Wickens, M.,Kennedy, S.G.,Butcher, S.E. An atypical RNA quadruplex marks RNAs as vectors for gene silencing. Nat.Struct.Mol.Biol. 2022 29 1113 1121 7R6S 38832773 Crystal Structure of the Putative Bacteriophage Protein from Stenotrophomonas maltophilia 2021-06-23 2022-11-09 Cobe, B.L.,Dey, S.,Minasov, G.,Inniss, N.,Satchell, K.J.F.,Cianciotto, N.P. Bactericidal effectors of the Stenotrophomonas maltophilia type IV secretion system: functional definition of the nuclease TfdA and structural determination of TfcB. Mbio 2024 15 0 0 8EW4 37325156 Human Serum Albumin with Cobalt (II) and Myristic Acid - crystal 1 2022-10-21 2022-11-09 Wu, D.,Gucwa, M.,Czub, M.P.,Cooper, D.R.,Shabalin, I.G.,Fritzen, R.,Arya, S.,Schwarz-Linek, U.,Blindauer, C.A.,Minor, W.,Stewart, A.J. Structural and biochemical characterisation of Co2+-binding sites on serum albumins and their interplay with fatty acids Chem Sci 2023 14 6244 6258 8EY5 37325156 Human Serum Albumin with Cobalt (II) and Myristic Acid - crystal 3 2022-10-26 2022-11-09 Wu, D.,Gucwa, M.,Czub, M.P.,Cooper, D.R.,Shabalin, I.G.,Fritzen, R.,Arya, S.,Schwarz-Linek, U.,Blindauer, C.A.,Minor, W.,Stewart, A.J. Structural and biochemical characterisation of Co2+-binding sites on serum albumins and their interplay with fatty acids Chem Sci 2023 14 6244 6258 8EJZ 36351243 [4+2] Aza-Cyclase Y293F variant 2022-09-19 2022-11-23 Rice, A.J.,Pelton, J.M.,Kramer, N.J.,Catlin, D.S.,Nair, S.K.,Pogorelov, T.V.,Mitchell, D.A.,Bowers, A.A. Enzymatic Pyridine Aromatization during Thiopeptide Biosynthesis. J.Am.Chem.Soc. 2022 144 21116 21124 8F8O 38284080 Crystal Structure of the Succinyl-diaminopimelate Desuccinylase (DapE) from Acinetobacter baumannii in complex with Succinic and L-Lactic Acids 2022-11-22 2022-11-30 Kelley, E.H.,Minasov, G.,Konczak, K.,Shuvalova, L.,Brunzelle, J.S.,Shukla, S.,Beulke, M.,Thabthimthong, T.,Olsen, K.W.,Inniss, N.L.,Satchell, K.J.F.,Becker, D.P. Biochemical and Structural Analysis of the Bacterial Enzyme Succinyl-Diaminopimelate Desuccinylase (DapE) from Acinetobacter baumannii. Acs Omega 2024 9 3905 3915 7T58 Crystal structure of Miz1 BTB domain 2021-12-11 2022-12-14 Linhares, B.M.,Kharchenko, V.,Cierpicki, T.,Jaremko, L. Prediction of BTB domain ligandability guided by protein dynamics To Be Published 0 0 0 0 7TVK 35559608 Structural, Kinetic, and Mechanistic Analysis of the Wild-Type and Inactivated Malonate Semialdehyde Decarboxylase: A Structural Basis for the Decarboxylase and Hydratase Activities 2022-02-05 2022-12-21 Lancaster, E.B.,Yang, W.,Johnson Jr., W.H.,Baas, B.J.,Zhang, Y.J.,Whitman, C.P. Kinetic, Inhibition, and Structural Characterization of a Malonate Semialdehyde Decarboxylase-like Protein from Calothrix sp. PCC 6303: A Gateway to the non-Pro1 Tautomerase Superfamily Members. Biochemistry 2022 0 0 0 8DWB 36640354 Neuraminidase from influenza virus A/Moscow/10/1999(H3N2) in complex with sialic acid 2022-08-01 2022-12-21 Lei, R.,Hernandez Garcia, A.,Tan, T.J.C.,Teo, Q.W.,Wang, Y.,Zhang, X.,Luo, S.,Nair, S.K.,Peng, J.,Wu, N.C. Mutational fitness landscape of human influenza H3N2 neuraminidase. Cell Rep 2023 42 111951 111951 7RIS 36502920 Crystal structure of RPA3624, a beta-propeller lactonase from Rhodopseudomonas palustris, with active-site bound phosphate 2021-07-20 2023-01-11 Hall, B.W.,Bingman, C.A.,Fox, B.G.,Noguera, D.R.,Donohue, T.J. A broad specificity beta-propeller enzyme from Rhodopseudomonas palustris that hydrolyzes many lactones including gamma-valerolactone. J.Biol.Chem. 2022 299 102782 102782 7RIZ 36502920 Crystal structure of RPA3624, a beta-propeller lactonase from Rhodopseudomonas palustris, with active-site bound 2-hydroxyquinoline 2021-07-20 2023-01-11 Hall, B.W.,Bingman, C.A.,Fox, B.G.,Noguera, D.R.,Donohue, T.J. A broad specificity beta-propeller enzyme from Rhodopseudomonas palustris that hydrolyzes many lactones including gamma-valerolactone. J.Biol.Chem. 2022 299 102782 102782 7USH 36599397 BRD2-BD2 in complex with SF2523 2022-04-25 2023-01-18 Sethi, B.,Kumar, V.,Jayasinghe, T.D.,Dong, Y.,Ronning, D.R.,Zhong, H.A.,Coulter, D.W.,Mahato, R.I. Targeting BRD4 and PI3K signaling pathways for the treatment of medulloblastoma. J Control Release 2023 354 80 90 7USJ 36599397 BRD4-BD2 in complex with SF2523 2022-04-25 2023-01-18 Sethi, B.,Kumar, V.,Jayasinghe, T.D.,Dong, Y.,Ronning, D.R.,Zhong, H.A.,Coulter, D.W.,Mahato, R.I. Targeting BRD4 and PI3K signaling pathways for the treatment of medulloblastoma. J Control Release 2023 354 80 90 7USK 36599397 BRD4-BD2 Ligand free 2022-04-25 2023-01-18 Sethi, B.,Kumar, V.,Jayasinghe, T.D.,Dong, Y.,Ronning, D.R.,Zhong, H.A.,Coulter, D.W.,Mahato, R.I. Targeting BRD4 and PI3K signaling pathways for the treatment of medulloblastoma. J Control Release 2023 354 80 90 8EAC 36592927 Thermus thermophilus methylenetetrahydrofolate reductase 2022-08-28 2023-01-18 Yamada, K.,Mendoza, J.,Koutmos, M. 5-Formyltetrahydrofolate promotes conformational remodeling in a methylenetetrahydrofolate reductase active site and inhibits its activity. J.Biol.Chem. 2022 299 102855 102855 7TJD Bacteriophage Q beta capsid protein in T1 symmetry 2022-01-16 2023-01-25 Shaw, V.,Sungsuwan, S.,McFall-Boegeman, H.,Huang, X.,Jin, X. Alternative Assembly of Q beta Virus-like Particles To Be Published 0 0 0 0 7TJG Bacteriophage Q beta capsid protein, A38K/A40C/D102C in T1 symmetry 2022-01-16 2023-01-25 Shaw, V.,Sungsuwan, S.,McFall-Boegeman, H.,Huang, X.,Jin, X. Alternative Assembly of Q beta Virus-like Particles To Be Published 0 0 0 0 7TMA 35390261 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2022-01-19 2023-01-25 Heinz-Kunert, S.L.,Pandya, A.,Dang, V.T.,Tran, P.N.,Ghosh, S.,McElheny, D.,Santarsiero, B.D.,Ren, Z.,Nguyen, A.I. Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework. J.Am.Chem.Soc. 2022 144 7001 7009 7TME 35390261 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2022-01-19 2023-01-25 Heinz-Kunert, S.L.,Pandya, A.,Dang, V.T.,Tran, P.N.,Ghosh, S.,McElheny, D.,Santarsiero, B.D.,Ren, Z.,Nguyen, A.I. Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework. J.Am.Chem.Soc. 2022 144 7001 7009 8D0V 36634136 Human LanCL1 C264A mutant bound to GSH 2022-05-26 2023-01-25 Ongpipattanakul, C.,Liu, S.,Luo, Y.,Nair, S.K.,van der Donk, W.A. The mechanism of thia-Michael addition catalyzed by LanC enzymes. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8D6H 36722993 Q108K:K40L:T51C:T53A:R58L:Q38F:Q4F mutant of hCRBPII bound to synthetic fluorophore CM1V after UV irradiation 2022-06-06 2023-02-01 Maity, S.,Bingham, C.,Sheng, W.,Ehyaei, N.,Chakraborty, D.,Tahmasebi-Nick, S.,Kimmel, T.E.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Light controlled reversible Michael addition of cysteine: a new tool for dynamic site-specific labeling of proteins. Analyst 2023 148 1085 1092 8D6N 36722993 Q108K:K40L:T53A:R58L:Q38F:Q4F mutant of hCRBPII bound to synthetic fluorophore CM1V 2022-06-06 2023-02-01 Maity, S.,Bingham, C.,Sheng, W.,Ehyaei, N.,Chakraborty, D.,Tahmasebi-Nick, S.,Kimmel, T.E.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Light controlled reversible Michael addition of cysteine: a new tool for dynamic site-specific labeling of proteins. Analyst 2023 148 1085 1092 8DN1 36722993 Q108K:K40L:T51C:T53A:R58L:Q38F:Q4F mutant of hCRBPII bound to synthetic fluorophore CM1V at pH 7.2 2022-07-10 2023-02-01 Maity, S.,Bingham, C.,Sheng, W.,Ehyaei, N.,Chakraborty, D.,Tahmasebi-Nick, S.,Kimmel, T.E.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Light controlled reversible Michael addition of cysteine: a new tool for dynamic site-specific labeling of proteins. Analyst 2023 148 1085 1092 8E85 36702254 Human DNA polymerase eta-DNA-rG-ended primer-dGMPNPP ternary mismatch complex with Mn2+ 2022-08-25 2023-02-01 Chang, C.,Lee Luo, C.,Eleraky, S.,Lin, A.,Zhou, G.,Gao, Y. Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity. J.Biol.Chem. 2023 299 102938 102938 8E86 36702254 Human DNA polymerase eta-DNA-rC-ended primer-dGMPNPP ternary mismatch complex with Mn2+ 2022-08-25 2023-02-01 Chang, C.,Lee Luo, C.,Eleraky, S.,Lin, A.,Zhou, G.,Gao, Y. Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity. J.Biol.Chem. 2023 299 102938 102938 8E89 36702254 Human DNA polymerase eta-DNA-rU-ended primer-binary complex 2022-08-25 2023-02-01 Chang, C.,Lee Luo, C.,Eleraky, S.,Lin, A.,Zhou, G.,Gao, Y. Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity. J.Biol.Chem. 2023 299 102938 102938 8E8A 36702254 Human DNA polymerase eta-DNA-dT-ended primer binary complex 2022-08-25 2023-02-01 Chang, C.,Lee Luo, C.,Eleraky, S.,Lin, A.,Zhou, G.,Gao, Y. Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity. J.Biol.Chem. 2023 299 102938 102938 8E8B 36702254 Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:ground state at pH7.0 (K+ MES) with 1 Ca2+ ion 2022-08-25 2023-02-01 Chang, C.,Lee Luo, C.,Eleraky, S.,Lin, A.,Zhou, G.,Gao, Y. Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity. J.Biol.Chem. 2023 299 102938 102938 8E8C 36702254 Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 30s 2022-08-25 2023-02-01 Chang, C.,Lee Luo, C.,Eleraky, S.,Lin, A.,Zhou, G.,Gao, Y. Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity. J.Biol.Chem. 2023 299 102938 102938 8E8D 36702254 Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 60s 2022-08-25 2023-02-01 Chang, C.,Lee Luo, C.,Eleraky, S.,Lin, A.,Zhou, G.,Gao, Y. Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity. J.Biol.Chem. 2023 299 102938 102938 8E8E 36702254 Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 90s 2022-08-25 2023-02-01 Chang, C.,Lee Luo, C.,Eleraky, S.,Lin, A.,Zhou, G.,Gao, Y. Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity. J.Biol.Chem. 2023 299 102938 102938 8E8F 36702254 Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 120s 2022-08-25 2023-02-01 Chang, C.,Lee Luo, C.,Eleraky, S.,Lin, A.,Zhou, G.,Gao, Y. Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity. J.Biol.Chem. 2023 299 102938 102938 8E8G 36702254 Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 180s 2022-08-25 2023-02-01 Chang, C.,Lee Luo, C.,Eleraky, S.,Lin, A.,Zhou, G.,Gao, Y. Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity. J.Biol.Chem. 2023 299 102938 102938 8E8H 36702254 Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 300s 2022-08-25 2023-02-01 Chang, C.,Lee Luo, C.,Eleraky, S.,Lin, A.,Zhou, G.,Gao, Y. 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Analyst 2023 148 1085 1092 7RYT 36753622 Crystal structure of Mycobacterium tuberculosis acetylated Homoserine transacetylase with Coenzyme A 2021-08-26 2023-02-22 Sharma, S.,Jayasinghe, Y.P.,Mishra, N.K.,Orimoloye, M.O.,Wong, T.Y.,Dalluge, J.J.,Ronning, D.R.,Aldrich, C.C. Structural and Functional Characterization of Mycobacterium tuberculosis Homoserine Transacetylase. Acs Infect Dis. 2023 9 540 553 7U01 Structure of CD148 fibronectin type III domain 2 2022-02-17 2023-02-22 Zhou, D.,Zhu, J. Structure of CD148 fibronectin type III domain 1 and 2 To Be Published 0 0 0 0 7U08 Structure of CD148 fibronectin type III domain 1 and 2 2022-02-17 2023-02-22 Zhou, D.,Zhu, J. Structure of CD148 fibronectin type III domain 1 and 2 To Be Published 0 0 0 0 8CZJ 36693843 A bacteria Zrt/Irt-like protein in the apo state 2022-05-24 2023-02-22 Zhang, Y.,Jiang, Y.,Gao, K.,Sui, D.,Yu, P.,Su, M.,Wei, G.W.,Hu, J. Structural insights into the elevator-type transport mechanism of a bacterial ZIP metal transporter. Nat Commun 2023 14 385 385 8EFG 36881763 Crystal structure of human TATDN1 bound to dAMP and two zinc ions 2022-09-08 2023-02-22 Dorival, J.,Eichman, B.F. Human and bacterial TatD enzymes exhibit apurinic/apyrimidinic (AP) endonuclease activity. Nucleic Acids Res. 2023 51 2838 2849 8EZ1 36770800 Human Ornithine Aminotransferase (hOAT) co-crystallized with its inactivator 3-Amino-4-fluorocyclopentenecarboxylic Acid 2022-10-30 2023-02-22 Shen, S.,Butrin, A.,Beaupre, B.A.,Ferreira, G.M.,Doubleday, P.F.,Grass, D.H.,Zhu, W.,Kelleher, N.L.,Moran, G.R.,Liu, D.,Silverman, R.B. Structural and Mechanistic Basis for the Inactivation of Human Ornithine Aminotransferase by (3 S ,4 S )-3-Amino-4-fluorocyclopentenecarboxylic Acid. Molecules 2023 28 0 0 8G22 Crystal Structure of the dTDP-4-dehydrorhamnose Reductase from Streptococcus pneumoniae. 2023-02-03 2023-02-22 Minasov, G.,Shuvalova, L.,Brunzelle, J.S.,Kiryukhina, O.,Satchell, K.J.F.,Center for Structural Biology of Infectious Diseases (CSBID),Center for Structural Genomics of Infectious Diseases (CSGID) Crystal Structure of the dTDP-4-dehydrorhamnose Reductase from Streptococcus pneumoniae. To Be Published 0 0 0 0 7U38 Pixantrone tethered DNA duplex 2022-02-26 2023-03-15 Kellum Jr., A.H.,Pallan, P.S.,Terrell, J.T.,Fu, Y.,Noh, B.,Rizzo, C.J.,Egli, M.,Stone, M.P. 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The Mycobacterium tuberculosis mycothiol S -transferase is divalent metal-dependent for mycothiol binding and transfer. Rsc Med Chem 2023 14 491 500 8G9Z 36929010 High-resolution crystal structure of the human selenomethionine-derived SepSecS-tRNASec complex 2023-02-22 2023-04-05 Puppala, A.K.,Castillo Suchkou, J.,French, R.L.,Kiernan, K.A.,Simonovic, M. Structural basis for the tRNA-dependent activation of the terminal complex of selenocysteine synthesis in humans. Nucleic Acids Res. 2023 51 4012 4026 8E15 38351001 A computationally stabilized hMPV F protein 2022-08-09 2023-04-12 Gonzalez, K.J.,Huang, J.,Criado, M.F.,Banerjee, A.,Tompkins, S.M.,Mousa, J.J.,Strauch, E.M. A general computational design strategy for stabilizing viral class I fusion proteins. Nat Commun 2024 15 1335 1335 7URP Second cohesin module from Sca5 of Ruminococcus bromii 2022-04-22 2023-05-03 Cerqueira, F.,Koropatkin, N. 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Biochemistry 2024 63 1955 1962 8SMQ 37493353 Crystal Structure of the N-terminal Domain of the Cryptic Surface Protein (CD630_25440) from Clostridium difficile. 2023-04-26 2023-05-10 Alexander, L.T.,Durairaj, J.,Kryshtafovych, A.,Abriata, L.A.,Bayo, Y.,Bhabha, G.,Breyton, C.,Caulton, S.G.,Chen, J.,Degroux, S.,Ekiert, D.C.,Erlandsen, B.S.,Freddolino, P.L.,Gilzer, D.,Greening, C.,Grimes, J.M.,Grinter, R.,Gurusaran, M.,Hartmann, M.D.,Hitchman, C.J.,Keown, J.R.,Kropp, A.,Kursula, P.,Lovering, A.L.,Lemaitre, B.,Lia, A.,Liu, S.,Logotheti, M.,Lu, S.,Markusson, S.,Miller, M.D.,Minasov, G.,Niemann, H.H.,Opazo, F.,Phillips Jr., G.N.,Davies, O.R.,Rommelaere, S.,Rosas-Lemus, M.,Roversi, P.,Satchell, K.,Smith, N.,Wilson, M.A.,Wu, K.L.,Xia, X.,Xiao, H.,Zhang, W.,Zhou, Z.H.,Fidelis, K.,Topf, M.,Moult, J.,Schwede, T. Protein target highlights in CASP15: Analysis of models by structure providers. Proteins 2023 91 1571 1599 8G2E 37242488 PKM2 bound to compound 2 2023-02-03 2023-05-17 Wubben, T.J.,Chaudhury, S.,Watch, B.T.,Stuckey, J.A.,Weh, E.,Fernando, R.,Goswami, M.,Pawar, M.,Rech, J.C.,Besirli, C.G. Development of Novel Small-Molecule Activators of Pyruvate Kinase Muscle Isozyme 2, PKM2, to Reduce Photoreceptor Apoptosis. Pharmaceuticals 2023 16 0 0 8DL1 37500984 BoGH13ASus-E523Q from Bacteroides ovatus bound to maltoheptaose 2022-07-06 2023-05-24 Brown, H.A.,DeVeaux, A.L.,Juliano, B.R.,Photenhauer, A.L.,Boulinguiez, M.,Bornschein, R.E.,Wawrzak, Z.,Ruotolo, B.T.,Terrapon, N.,Koropatkin, N.M. BoGH13A Sus from Bacteroides ovatus represents a novel alpha-amylase used for Bacteroides starch breakdown in the human gut. 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Nat.Struct.Mol.Biol. 2024 31 255 265 8DVC 37264151 Receptor ShHTL5 from Striga hermonthica in complex with strigolactone agonist GR24 2022-07-28 2023-06-14 Arellano-Saab, A.,Skarina, T.,Xu, Z.,McErlean, C.S.P.,Savchenko, A.,Lumba, S.,Stogios, P.J.,McCourt, P. Structural analysis of a hormone-bound Striga strigolactone receptor. Nat.Plants 2023 9 883 888 8E1P 37044090 Crystal structure of BG505 SOSIP.v4.1-GT1.2 trimer in complex with gl-PGV20 and PGT124 Fabs 2022-08-11 2023-06-21 Caniels, T.G.,Medina-Ramirez, M.,Zhang, J.,Sarkar, A.,Kumar, S.,LaBranche, A.,Derking, R.,Allen, J.D.,Snitselaar, J.L.,Capella-Pujol, J.,Sanchez, I.D.M.,Yasmeen, A.,Diaz, M.,Aldon, Y.,Bijl, T.P.L.,Venkatayogi, S.,Martin Beem, J.S.,Newman, A.,Jiang, C.,Lee, W.H.,Pater, M.,Burger, J.A.,van Breemen, M.J.,de Taeye, S.W.,Rantalainen, K.,LaBranche, C.,Saunders, K.O.,Montefiori, D.,Ozorowski, G.,Ward, A.B.,Crispin, M.,Moore, J.P.,Klasse, P.J.,Haynes, B.F.,Wilson, I.A.,Wiehe, K.,Verkoczy, L.,Sanders, R.W. Germline-targeting HIV-1 Env vaccination induces VRC01-class antibodies with rare insertions. Cell Rep Med 2023 4 101003 101003 8SX4 37471629 Crystal Structure of eIF4e in complex with Compound 7n 2023-05-19 2023-06-21 Cardenas, E.L.,O'Rourke, R.L.,Menon, A.,Meagher, J.,Stuckey, J.,Garner, A.L. Design of Cell-Permeable Inhibitors of Eukaryotic Translation Initiation Factor 4E (eIF4E) for Inhibiting Aberrant Cap-Dependent Translation in Cancer. J.Med.Chem. 2023 66 10734 10745 7TXG 37352301 Structure of the Class II Fructose-1,6-Bisphosphatase from Francisella tularensis with native Mn++ divalent cation and partially occupied product F6P 2022-02-09 2023-06-28 Selezneva, A.I.,Harding, L.N.M.,Gutka, H.J.,Movahedzadeh, F.,Abad-Zapatero, C. New structures of Class II Fructose-1,6-Bisphosphatase from Francisella tularensis provide a framework for a novel catalytic mechanism for the entire class. Plos One 2023 18 0 0 8DK4 Peroxisome proliferator-activated receptor gamma in complex with VSP-51-2 2022-07-02 2023-07-05 Ma, L.,Zhou, X.E.,Suino-Powell, K.,Hou, N.,Zhou, Z.,Luo, J.,Xu, H.E.,Yi, W. Identification of VSP-51-2 as the Novel and Safe PPAR gamma Modulator: Structure-Based Design, Biological Validation and Crystal Analysis To Be Published 0 0 0 0 8FQM 37358467 ADC-7 in complex with boronic acid transition state inhibitor MB076 2023-01-06 2023-07-05 Powers, R.A.,June, C.M.,Fernando, M.C.,Fish, E.R.,Maurer, O.L.,Baumann, R.M.,Beardsley, T.J.,Taracila, M.A.,Rudin, S.D.,Hujer, K.M.,Hujer, A.M.,Santi, N.,Villamil, V.,Introvigne, M.L.,Prati, F.,Caselli, E.,Bonomo, R.A.,Wallar, B.J. Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum. J.Med.Chem. 2023 66 8510 8525 8FQM 37358467 ADC-7 in complex with boronic acid transition state inhibitor MB076 2023-01-06 2023-07-05 Powers, R.A.,June, C.M.,Fernando, M.C.,Fish, E.R.,Maurer, O.L.,Baumann, R.M.,Beardsley, T.J.,Taracila, M.A.,Rudin, S.D.,Hujer, K.M.,Hujer, A.M.,Santi, N.,Villamil, V.,Introvigne, M.L.,Prati, F.,Caselli, E.,Bonomo, R.A.,Wallar, B.J. Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum. J.Med.Chem. 2023 66 8510 8525 8FQN 37358467 apo ADC-33 beta-lactamase 2023-01-06 2023-07-05 Powers, R.A.,June, C.M.,Fernando, M.C.,Fish, E.R.,Maurer, O.L.,Baumann, R.M.,Beardsley, T.J.,Taracila, M.A.,Rudin, S.D.,Hujer, K.M.,Hujer, A.M.,Santi, N.,Villamil, V.,Introvigne, M.L.,Prati, F.,Caselli, E.,Bonomo, R.A.,Wallar, B.J. Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum. J.Med.Chem. 2023 66 8510 8525 8FQO 37358467 ADC-33 in complex with boronic acid transition state inhibitor MB076 2023-01-06 2023-07-05 Powers, R.A.,June, C.M.,Fernando, M.C.,Fish, E.R.,Maurer, O.L.,Baumann, R.M.,Beardsley, T.J.,Taracila, M.A.,Rudin, S.D.,Hujer, K.M.,Hujer, A.M.,Santi, N.,Villamil, V.,Introvigne, M.L.,Prati, F.,Caselli, E.,Bonomo, R.A.,Wallar, B.J. Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum. J.Med.Chem. 2023 66 8510 8525 8FQO 37358467 ADC-33 in complex with boronic acid transition state inhibitor MB076 2023-01-06 2023-07-05 Powers, R.A.,June, C.M.,Fernando, M.C.,Fish, E.R.,Maurer, O.L.,Baumann, R.M.,Beardsley, T.J.,Taracila, M.A.,Rudin, S.D.,Hujer, K.M.,Hujer, A.M.,Santi, N.,Villamil, V.,Introvigne, M.L.,Prati, F.,Caselli, E.,Bonomo, R.A.,Wallar, B.J. Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum. J.Med.Chem. 2023 66 8510 8525 8FQP 37358467 apo ADC-162 beta-lactamase 2023-01-06 2023-07-05 Powers, R.A.,June, C.M.,Fernando, M.C.,Fish, E.R.,Maurer, O.L.,Baumann, R.M.,Beardsley, T.J.,Taracila, M.A.,Rudin, S.D.,Hujer, K.M.,Hujer, A.M.,Santi, N.,Villamil, V.,Introvigne, M.L.,Prati, F.,Caselli, E.,Bonomo, R.A.,Wallar, B.J. Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum. J.Med.Chem. 2023 66 8510 8525 8FQQ 37358467 ADC-162 in complex with boronic acid transition state inhibitor MB076 2023-01-06 2023-07-05 Powers, R.A.,June, C.M.,Fernando, M.C.,Fish, E.R.,Maurer, O.L.,Baumann, R.M.,Beardsley, T.J.,Taracila, M.A.,Rudin, S.D.,Hujer, K.M.,Hujer, A.M.,Santi, N.,Villamil, V.,Introvigne, M.L.,Prati, F.,Caselli, E.,Bonomo, R.A.,Wallar, B.J. Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum. J.Med.Chem. 2023 66 8510 8525 8FQS 37358467 ADC-212 in complex with boronic acid transition state inhibitor MB076 2023-01-06 2023-07-05 Powers, R.A.,June, C.M.,Fernando, M.C.,Fish, E.R.,Maurer, O.L.,Baumann, R.M.,Beardsley, T.J.,Taracila, M.A.,Rudin, S.D.,Hujer, K.M.,Hujer, A.M.,Santi, N.,Villamil, V.,Introvigne, M.L.,Prati, F.,Caselli, E.,Bonomo, R.A.,Wallar, B.J. Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum. J.Med.Chem. 2023 66 8510 8525 8FQT 37358467 Apo ADC-219 beta-lactamase 2023-01-06 2023-07-05 Powers, R.A.,June, C.M.,Fernando, M.C.,Fish, E.R.,Maurer, O.L.,Baumann, R.M.,Beardsley, T.J.,Taracila, M.A.,Rudin, S.D.,Hujer, K.M.,Hujer, A.M.,Santi, N.,Villamil, V.,Introvigne, M.L.,Prati, F.,Caselli, E.,Bonomo, R.A.,Wallar, B.J. 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J.Med.Chem. 2023 66 8510 8525 8FQV 37358467 apo ADC-30 beta-lactamase 2023-01-06 2023-07-05 Powers, R.A.,June, C.M.,Fernando, M.C.,Fish, E.R.,Maurer, O.L.,Baumann, R.M.,Beardsley, T.J.,Taracila, M.A.,Rudin, S.D.,Hujer, K.M.,Hujer, A.M.,Santi, N.,Villamil, V.,Introvigne, M.L.,Prati, F.,Caselli, E.,Bonomo, R.A.,Wallar, B.J. Synthesis of a Novel Boronic Acid Transition State Inhibitor, MB076: A Heterocyclic Triazole Effectively Inhibits Acinetobacter -Derived Cephalosporinase Variants with an Expanded-Substrate Spectrum. J.Med.Chem. 2023 66 8510 8525 8FQW 37358467 ADC-30 in complex with boronic acid transition state inhibitor MB076 2023-01-06 2023-07-05 Powers, R.A.,June, C.M.,Fernando, M.C.,Fish, E.R.,Maurer, O.L.,Baumann, R.M.,Beardsley, T.J.,Taracila, M.A.,Rudin, S.D.,Hujer, K.M.,Hujer, A.M.,Santi, N.,Villamil, V.,Introvigne, M.L.,Prati, F.,Caselli, E.,Bonomo, R.A.,Wallar, B.J. 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Proc.Natl.Acad.Sci.USA 2023 120 0 0 8SDB 37298853 Crystal Structure of E.Coli Branching Enzyme in complex with malto-octose 2023-04-06 2023-07-12 Fawaz, R.,Bingham, C.,Nayebi, H.,Chiou, J.,Gilbert, L.,Park, S.H.,Geiger, J.H. The Structure of Maltooctaose-Bound Escherichia coli Branching Enzyme Suggests a Mechanism for Donor Chain Specificity. Molecules 2023 28 0 0 8DHK Crystal structure of human Sulfide Quinone Oxidoreductase K207E 2022-06-27 2023-07-19 Bonanata, J.,Landry, A.,Ceric, K.,Ludlam, A.,Mascarenhas, R.,Coitino, L.,Banerjee, R. Sulfide oxidation in human sulfide quinone oxidoreductase is enthalpically driven: Contributions of the Lys-207 general base To Be Published 0 0 0 0 8DVX 37443314 Structure of acetylated Pig somatic Cytochrome c (Aly39) at 1.5A 2022-07-30 2023-07-19 Morse, P.T.,Perez-Mejias, G.,Wan, J.,Turner, A.A.,Marquez, I.,Kalpage, H.A.,Vaishnav, A.,Zurek, M.P.,Huettemann, P.P.,Kim, K.,Arroum, T.,De la Rosa, M.A.,Chowdhury, D.D.,Lee, I.,Brunzelle, J.S.,Sanderson, T.H.,Malek, M.H.,Meierhofer, D.,Edwards, B.F.P.,Diaz-Moreno, I.,Huttemann, M. Cytochrome c lysine acetylation regulates cellular respiration and cell death in ischemic skeletal muscle. Nat Commun 2023 14 4166 4166 8DZL 37443314 Structure of the K39Q mutant of rat somatic Cytochrome c at 1.36A 2022-08-08 2023-07-19 Morse, P.T.,Perez-Mejias, G.,Wan, J.,Turner, A.A.,Marquez, I.,Kalpage, H.A.,Vaishnav, A.,Zurek, M.P.,Huettemann, P.P.,Kim, K.,Arroum, T.,De la Rosa, M.A.,Chowdhury, D.D.,Lee, I.,Brunzelle, J.S.,Sanderson, T.H.,Malek, M.H.,Meierhofer, D.,Edwards, B.F.P.,Diaz-Moreno, I.,Huttemann, M. Cytochrome c lysine acetylation regulates cellular respiration and cell death in ischemic skeletal muscle. Nat Commun 2023 14 4166 4166 8DQ4 X-ray crystal structure of Flavobacterium johnsoniae dimanganese(II) class Id ribonucleotide reductase beta subunit K71R variant 2022-07-18 2023-07-26 Rose, H.R.,Boal, A.K. X-ray crystal structure of Flavobacterium johnsoniae dimanganese(II) class Id ribonucleotide reductase beta subunit K71R variant To Be Published 0 0 0 0 8EVE 37468099 HUMAN DNA POLYMERASE ETA INSERTION COMPLEX 2022-10-20 2023-08-02 Richie-Jannetta, R.,Pallan, P.,Kingsley, P.J.,Kamdar, N.,Egli, M.,Marnett, L.J. The peroxidation-derived DNA adduct, 6-oxo-M 1 dG, is a strong block to replication by human DNA polymerase eta. J.Biol.Chem. 2023 299 105067 105067 8EVF 37468099 HUMAN DNA POLYMERASE ETA EXTENSION COMPLEX WITH AN INCOMING DCTP 2022-10-20 2023-08-02 Richie-Jannetta, R.,Pallan, P.,Kingsley, P.J.,Kamdar, N.,Egli, M.,Marnett, L.J. The peroxidation-derived DNA adduct, 6-oxo-M 1 dG, is a strong block to replication by human DNA polymerase eta. J.Biol.Chem. 2023 299 105067 105067 8TGY 37645731 Crystal structure of Gdx-Clo from Small Multidrug Resistance family of transporters in complex with guanylurea 2023-07-13 2023-08-02 Lucero, R.M.,Demirer, K.,Yeh, T.J.,Stockbridge, R.B. Transport of metformin metabolites by guanidinium exporters of the Small Multidrug Resistance family. Biorxiv 2023 0 0 0 8FE6 37653170 Crystal structure of human O-GlcNAc transferase (OGT) in complex with an exosite-binding peptide and UDP-GlcNAc 2022-12-05 2023-08-09 Blankenship, C.M.,Xie, J.,Benz, C.,Wang, A.,Ivarsson, Y.,Jiang, J. Motif-dependent binding on the intervening domain regulates O-GlcNAc transferase. Nat.Chem.Biol. 2023 19 1423 1431 8FUF 37653170 Crystal structure of human O-GlcNAc transferase (OGT) in complex with an exosite-binding peptide (ZNF831) and UDP-GlcNAc 2023-01-17 2023-08-09 Blankenship, C.M.,Xie, J.,Benz, C.,Wang, A.,Ivarsson, Y.,Jiang, J. Motif-dependent binding on the intervening domain regulates O-GlcNAc transferase. Nat.Chem.Biol. 2023 19 1423 1431 8SP9 37486760 Crystal Structure of Coxsackievirus B3 (CVB3) Cloverleaf RNA with tRNA scaffold 2023-05-02 2023-08-09 Gottipati, K.,McNeme, S.C.,Tipo, J.,White, M.A.,Choi, K.H. Structural basis for cloverleaf RNA-initiated viral genome replication. Nucleic Acids Res. 2023 51 8850 8863 7ULU Human DDAH1 soaked with its inhibitor ClPyrAA 2022-04-05 2023-08-30 Tuley, A.,Zheng, Y.,Tommasi, S.,Butrin, A.,May, K.V.,Ahn, Y.,Reidl, T.C.,Weerakoon, L.,Hulin, J.,Meech, R.,Patel, D.S.,Horton, C.P.,Swartzel, C.J.,Kim, Y.,Silverman, B.R.,Mangoni, A.,Liu, D.,Fast, W. Optimization of a switchable electrophile fragment into a potent and selective covalent inhibitor of human DDAH1 To Be Published 0 0 0 0 7ULV Human DDAH1 soaked with its inactivator S-((4-chloropyridin-2-yl)methyl)-L-cysteine 2022-04-05 2023-08-30 Tuley, A.,Zheng, Y.,Tommasi, S.,Butrin, A.,May, K.V.,Ahn, Y.,Reidl, T.C.,Weerakoon, L.,Hulin, J.,Meech, R.,Patel, D.S.,Horton, C.P.,Swartzel, C.J.,Kim, Y.,Silverman, B.R.,Mangoni, A.,Liu, D.,Fast, W. Optimization of a switchable electrophile fragment into a potent and selective covalent inhibitor of human DDAH1 To Be Published 0 0 0 0 8SH0 37590346 Structure of human POT1 DNA binding domain bound to a 5'-phosphorylated junction of a telomeric DNA hairpin with a 3'-overhang 2023-04-13 2023-08-30 Tesmer, V.M.,Brenner, K.A.,Nandakumar, J. Human POT1 protects the telomeric ds-ss DNA junction by capping the 5' end of the chromosome. Science 2023 381 771 778 8SH1 37590346 Structure of human POT1 DNA binding domain bound to a 5'-phosphorylated junction of a telomeric double-stranded DNA duplex with a 3'-overhang 2023-04-13 2023-08-30 Tesmer, V.M.,Brenner, K.A.,Nandakumar, J. Human POT1 protects the telomeric ds-ss DNA junction by capping the 5' end of the chromosome. Science 2023 381 771 778 8TTI 39989782 Trp-6-Halogenase BorH complexed with FAD and Trp 2023-08-14 2023-08-30 Ashaduzzaman, M.,Lingkon, K.,De Silva, A.J.,Bellizzi 3rd, J.J. Crystallographic and Thermodynamic Evidence of Negative Coupling in the Flavin-Dependent Tryptophan Halogenases AbeH and BorH. Acs Omega 2025 10 5849 5865 8TTJ 39989782 Tryptophan-6-halogenase BorH complexed with 6-chlorotryptophan 2023-08-14 2023-08-30 Ashaduzzaman, M.,Lingkon, K.,De Silva, A.J.,Bellizzi 3rd, J.J. Crystallographic and Thermodynamic Evidence of Negative Coupling in the Flavin-Dependent Tryptophan Halogenases AbeH and BorH. Acs Omega 2025 10 5849 5865 8TTK 39989782 Tryptophan-6-halogenase BorH apo structure 2023-08-14 2023-08-30 Ashaduzzaman, M.,Lingkon, K.,De Silva, A.J.,Bellizzi 3rd, J.J. Crystallographic and Thermodynamic Evidence of Negative Coupling in the Flavin-Dependent Tryptophan Halogenases AbeH and BorH. Acs Omega 2025 10 5849 5865 7U5V 37945831 Crystal structure of the Mixed Lineage Leukaemia (MLL1) SET Domain with the cofactor product S-Adenosylhomocysteine and Borealin peptide 2022-03-02 2023-09-27 Sha, L.,Yang, Z.,An, S.,Yang, W.,Kim, S.,Oh, H.,Xu, J.,Yin, J.,Wang, H.,Lenz, H.J.,An, W.,Cho, U.S.,Dou, Y. Non-canonical MLL1 activity regulates centromeric phase separation and genome stability. Nat.Cell Biol. 2023 25 1637 1649 8SAM 37901177 Crystal structure of class III lanthipeptide synthetase LP-GS-ThurKC in complex with ATP 2023-04-01 2023-10-11 Hernandez Garcia, A.,Nair, S.K. Structure and Function of a Class III Metal-Independent Lanthipeptide Synthetase. Acs Cent.Sci. 2023 9 1944 1956 8SAP 37901177 Crystal structure of class III lanthipeptide synthetase ThurKC 2023-04-01 2023-10-11 Hernandez Garcia, A.,Nair, S.K. Structure and Function of a Class III Metal-Independent Lanthipeptide Synthetase. Acs Cent.Sci. 2023 9 1944 1956 7UCS The Crystal Structure of Domain-Swapped Dimer Q108K:T51D:A28C:L36C:F57:H:H:H:R58 Mutant of hCRBPII with Histidine Insertion in the Hinge Loop Region at 1.92 Angstrom Resolution 2022-03-17 2023-10-18 Ghanbarpour, A.,Geiger, J. The Crystal Structure of Domain-Sawpped Dimer Q108K:T51D:A28C:L36C:F57:H:R58 Mutant of hCRBPII with a Histidine Insertion in the Hinge Loop Region at 1.96 Angstrom Resolution To Be Published 0 0 0 0 7UCT The Crystal Structure of Apo Domain-Swapped Dimer F57:H:H:H:H:H:H:R58 Mutant of HCRBPII with Histidine Insertion in the Hinge Loop Region at 2.5 Angstrom Resolution 2022-03-17 2023-10-18 Ghanbarpour, A.,Geiger, J. The Crystal Structure of Domain-Sawpped Dimer Q108K:T51D:A28C:L36C:F57:H:R58 Mutant of hCRBPII with a Histidine Insertion in the Hinge Loop Region at 1.96 Angstrom Resolution To Be Published 0 0 0 0 7UCV The Crystal Structure of Apo Domain-Swapped Dimer Q108K:T51D:A28CL36C R58:H:H:H:N59 HCRBPII with Histidine Insertion in the Hinge Loop Region at 2.19 Angstrom Resolution 2022-03-17 2023-10-18 Ghanbarpour, A.,Geiger, J. The Crystal Structure of Domain-Sawpped Dimer Q108K:T51D:A28C:L36C:F57:H:R58 Mutant of hCRBPII with a Histidine Insertion in the Hinge Loop Region at 1.96 Angstrom Resolution To Be Published 0 0 0 0 7UD1 The Crystal Structure of Apo Monomer F57:H:H:H:R58 HCRBPII with Histidine Insertion in the Hinge Loop Region at 1.3 Angstrom Resolution 2022-03-17 2023-10-18 Ghanbarpour, A.,Geiger, J. The Crystal Structure of Apo Monomer F57:H:H:H:R58 HCRBPII with Histidine Insertion in the Hinge Loop Region at 1.3 Angstrom Resolution To Be Published 0 0 0 0 8F4S 37728236 Crystal Structure of the SARS-CoV-2 2'-O-Methyltransferase with Compound 5a bound to the Cryptic Pocket of nsp16 2022-11-11 2023-10-18 Inniss, N.L.,Kozic, J.,Li, F.,Rosas-Lemus, M.,Minasov, G.,Rybacek, J.,Zhu, Y.,Pohl, R.,Shuvalova, L.,Rulisek, L.,Brunzelle, J.S.,Bednarova, L.,Stefek, M.,Kormanik, J.M.,Andris, E.,Sebestik, J.,Li, A.S.M.,Brown, P.J.,Schmitz, U.,Saikatendu, K.,Chang, E.,Nencka, R.,Vedadi, M.,Satchell, K.J.F. Discovery of a Druggable, Cryptic Pocket in SARS-CoV-2 nsp16 Using Allosteric Inhibitors. Acs Infect Dis. 2023 9 1918 1931 8F4Y 37728236 Crystal Structure of SARS-CoV-2 2'-O-Methyltransferase in Complex with Compound 5a covalently bound to nsp16 and nsp10 2022-11-11 2023-10-18 Inniss, N.L.,Kozic, J.,Li, F.,Rosas-Lemus, M.,Minasov, G.,Rybacek, J.,Zhu, Y.,Pohl, R.,Shuvalova, L.,Rulisek, L.,Brunzelle, J.S.,Bednarova, L.,Stefek, M.,Kormanik, J.M.,Andris, E.,Sebestik, J.,Li, A.S.M.,Brown, P.J.,Schmitz, U.,Saikatendu, K.,Chang, E.,Nencka, R.,Vedadi, M.,Satchell, K.J.F. Discovery of a Druggable, Cryptic Pocket in SARS-CoV-2 nsp16 Using Allosteric Inhibitors. Acs Infect Dis. 2023 9 1918 1931 8UFM 39969084 Crystal Structure of L516C/Y647C Mutant of SARS-Unique Domain (SUD) from SARS-CoV-2 2023-10-04 2023-10-18 Rosas-Lemus, M.,Minasov, G.,Brunzelle, J.S.,Taha, T.Y.,Lemak, S.,Yin, S.,Shuvalova, L.,Rosecrans, J.,Khanna, K.,Seifert, H.S.,Savchenko, A.,Stogios, P.J.,Ott, M.,Satchell, K.J.F. Torsional twist of the SARS-CoV and SARS-CoV-2 SUD-N and SUD-M domains. Protein Sci. 2025 34 0 0 8SAO 37901177 Crystal structure of class III lanthipeptide synthetase ThurKC in complex with ThurA1 leader peptide 2023-04-01 2023-11-01 Hernandez Garcia, A.,Nair, S.K. Structure and Function of a Class III Metal-Independent Lanthipeptide Synthetase. Acs Cent.Sci. 2023 9 1944 1956 8GB9 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-02-24 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GBA 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-02-24 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GBI 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-02-26 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GBM 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-02-26 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GBO 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-02-26 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GD6 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-03-03 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GD8 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-03-03 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GIV 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-03-14 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GJ7 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-03-15 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GK1 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-03-16 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GK2 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-03-16 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GK9 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-03-17 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GKB 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-03-17 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GKX 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-03-20 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GL0 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-03-20 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GL4 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-03-20 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8GL5 37639365 Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 2023-03-20 2023-11-15 Hess, S.S.,Coppola, F.,Dang, V.T.,Tran, P.N.,Mickel, P.J.,Oktawiec, J.,Ren, Z.,Kral, P.,Nguyen, A.I. Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks. J.Am.Chem.Soc. 2023 145 19588 19600 8F71 36757561 Crystal structure of the histidine kinase domain of bacteriophytochrome RpBphP2 2022-11-17 2023-11-22 Kumarapperuma, I.,Tom, I.P.,Bandara, S.,Montano, S.,Yang, X. Mode of autophosphorylation in bacteriophytochromes RpBphP2 and RpBphP3. Photochem Photobiol Sci 2023 22 1257 1266 8TN2 37890134 Structure of S. hygroscopicus aminotransferase MppQ complexed with pyridoxal-5'-phosphate (PLP) 2023-08-01 2023-11-22 Vuksanovic, N.,Melkonian, T.R.,Serrano, D.A.,Schwabacher, A.W.,Silvaggi, N.R. Structural and Biochemical Characterization of MppQ, an L-Enduracididine Biosynthetic Enzyme from Streptomyces hygroscopicus. Biochemistry 2023 62 3105 3115 8FBV 37406165 Compound 7 bound to procaspase-6 2022-11-30 2023-12-13 Togo, T.,Tram, L.,Denton, L.G.,ElHilali-Pollard, X.,Gu, J.,Jiang, J.,Liu, C.,Zhao, Y.,Zhao, Y.,Zheng, Y.,Zheng, Y.,Yang, J.,Fan, P.,Arkin, M.R.,Harma, H.,Sun, D.,Canan, S.S.,Wheeler, S.E.,Renslo, A.R. Systematic Study of Heteroarene Stacking Using a Congeneric Set of Molecular Glues for Procaspase-6. J.Med.Chem. 2023 66 9784 9796 8SF6 37720819 Promiscuous amino acid gamma synthase from Caldicellulosiruptor hydrothermalis in closed conformation 2023-04-10 2023-12-27 Zmich, A.,Perkins, L.J.,Bingman, C.,Acheson, J.F.,Buller, A.R. Multiplexed Assessment of Promiscuous Non-Canonical Amino Acid Synthase Activity in a Pyridoxal Phosphate-Dependent Protein Family. Acs Catalysis 2023 13 11644 11655 8SOQ 37831946 S127A variant of LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with authentic substrate NaAD 2023-04-29 2023-12-27 Chatterjee, S.,Nevarez, J.L.,Rankin, J.A.,Hu, J.,Hausinger, R.P. Structure of the LarB-Substrate Complex and Identification of a Reaction Intermediate during Nickel-Pincer Nucleotide Cofactor Biosynthesis. Biochemistry 2023 62 3096 3104 8STD 37831946 S127A variant of LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with authentic substrate NaAD and soaked with CS2 2023-05-10 2023-12-27 Chatterjee, S.,Nevarez, J.L.,Rankin, J.A.,Hu, J.,Hausinger, R.P. Structure of the LarB-Substrate Complex and Identification of a Reaction Intermediate during Nickel-Pincer Nucleotide Cofactor Biosynthesis. Biochemistry 2023 62 3096 3104 8SS0 38206808 Human sterol 14 alpha-demethylase (CYP51) in complex with the reaction intermediate 14 alpha-aldehyde dihydrolanosterol 2023-05-08 2024-01-17 McCarty, K.D.,Tateishi, Y.,Hargrove, T.Y.,Lepesheva, G.I.,Guengerich, F.P. Oxygen-18 Labeling Reveals a Mixed Fe-O Mechanism in the Last Step of Cytochrome P450 51 Sterol 14 alpha-Demethylation. Angew.Chem.Int.Ed.Engl. 2024 63 0 0 8U55 Crystal structure of Enterococcus faecium EnGen25 Penicillin-binding protein 5 (PBP5) 2023-09-12 2024-02-07 Pemberton, O.A.,Shamoo, Y. Crystal structure of Enterococcus faecium EnGen25 Penicillin-binding protein 5 (PBP5) To Be Published 0 0 0 0 8UM6 38342077 Structure of copper bound to YcnI W137F 2023-10-17 2024-02-07 de Oliveira Silva, Y.R.,Zheng, D.,Peters, S.C.,Fisher, O.S. Stabilization of a Cu-binding site by a highly conserved tryptophan residue. J.Inorg.Biochem. 2024 253 112501 112501 8SKQ 37638886 RNA oligonucleotide containing an alpha-(L)-threofuranosyl nucleic acid (TNA) 2023-04-20 2024-02-14 Matsuda, S.,Bala, S.,Liao, J.Y.,Datta, D.,Mikami, A.,Woods, L.,Harp, J.M.,Gilbert, J.A.,Bisbe, A.,Manoharan, R.M.,Kim, M.,Theile, C.S.,Guenther, D.C.,Jiang, Y.,Agarwal, S.,Maganti, R.,Schlegel, M.K.,Zlatev, I.,Charisse, K.,Rajeev, K.G.,Castoreno, A.,Maier, M.,Janas, M.M.,Egli, M.,Chaput, J.C.,Manoharan, M. Shorter Is Better: The alpha-(l)-Threofuranosyl Nucleic Acid Modification Improves Stability, Potency, Safety, and Ago2 Binding and Mitigates Off-Target Effects of Small Interfering RNAs. J.Am.Chem.Soc. 2023 145 19691 19706 8TSV 38383158 Crystal structure of the Zika virus stem-loop A (SLA) top stem 2023-08-11 2024-03-06 Tipo, J.,Gottipati, K.,Choi, K.H. High-resolution RNA tertiary structures in Zika virus stem-loop A for the development of inhibitory small molecules. Rna 2024 30 609 623 8V56 38362872 UIC-1 mutant - UIC-1-B5W 2023-11-30 2024-03-06 Heinz-Kunert, S.L.,Pandya, A.,Dang, V.T.,Oktawiec, J.,Nguyen, A.I. Pore Restructuring of Peptide Frameworks by Mutations at Distal Packing Residues. Biomacromolecules 2024 25 2016 2023 8V59 38362872 UIC-1 mutant - UIC-1-B5I 2023-11-30 2024-03-06 Heinz-Kunert, S.L.,Pandya, A.,Dang, V.T.,Oktawiec, J.,Nguyen, A.I. Pore Restructuring of Peptide Frameworks by Mutations at Distal Packing Residues. Biomacromolecules 2024 25 2016 2023 8V5W 38362872 UIC-1 mutant UIC-1-B5T 2023-12-01 2024-03-06 Heinz-Kunert, S.L.,Pandya, A.,Dang, V.T.,Oktawiec, J.,Nguyen, A.I. Pore Restructuring of Peptide Frameworks by Mutations at Distal Packing Residues. Biomacromolecules 2024 25 2016 2023 8V5X 38362872 UIC-1 mutant - UIC-1-L6A 2023-12-01 2024-03-06 Heinz-Kunert, S.L.,Pandya, A.,Dang, V.T.,Oktawiec, J.,Nguyen, A.I. Pore Restructuring of Peptide Frameworks by Mutations at Distal Packing Residues. Biomacromolecules 2024 25 2016 2023 8V5Z 38362872 UIC-1 mutant - UIC-1-L6M 2023-12-01 2024-03-06 Heinz-Kunert, S.L.,Pandya, A.,Dang, V.T.,Oktawiec, J.,Nguyen, A.I. Pore Restructuring of Peptide Frameworks by Mutations at Distal Packing Residues. Biomacromolecules 2024 25 2016 2023 8ITZ Crystal structure of human Galectin-3 in complex with small molecule inhibitor 2023-03-23 2024-03-27 Swidorski, J.J.,Beno, B.B.,Liu, C.,Yoon, D.,Ghosh, K.,Sale, H.,Shah, D.,Acharya, K.,Yanchunas, J.,Ellsworth, B.,Cheng, D.,Regueiro-Ren, A. Discovery and Exploration of Monosaccharide Linked Dimers to Target Fibrosis To Be Published 0 0 0 0 8U8L 38588418 X-ray crystal structure of TEBP-2 MCD3 with ds DNA 2023-09-18 2024-04-03 Padmanaban, S.,Lambacher, N.J.,Tesmer, V.M.,Zhang, J.,Shibuya, H.,Nandakumar, J. Caenorhabditis elegans telomere-binding proteins TEBP-1 and TEBP-2 adapt the Myb module to dimerize and bind telomeric DNA. Proc.Natl.Acad.Sci.USA 2024 121 0 0 8W02 39046136 Q108K:K40L:T51V:T53S:R58W mutant of hCRBPII bound to synthetic fluorophore TD-1V 2024-02-13 2024-04-03 Santos, E.M.,Chandra, I.,Assar, Z.,Sheng, W.,Ghanbarpour, A.,Bingham, C.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Regulation of Absorption and Emission in a Protein/Fluorophore Complex. Acs Chem.Biol. 2024 19 1725 1732 8VET 38595098 Crystal structure of PRMT5:MEP50 in complex with MTA and oxamide compound 1 2023-12-20 2024-04-24 Cottrell, K.M.,Briggs, K.J.,Whittington, D.A.,Jahic, H.,Ali, J.A.,Davis, C.B.,Gong, S.,Gotur, D.,Gu, L.,McCarren, P.,Tonini, M.R.,Tsai, A.,Wilker, E.W.,Yuan, H.,Zhang, M.,Zhang, W.,Huang, A.,Maxwell, J.P. Discovery of TNG908: A Selective, Brain Penetrant, MTA-Cooperative PRMT5 Inhibitor That Is Synthetically Lethal with MTAP -Deleted Cancers. J.Med.Chem. 2024 67 6064 6080 8UN9 38661211 Crystal structure of the MrfB exonuclease catalytic core 2023-10-18 2024-05-01 Manthei, K.A.,Munson, L.M.,Nandakumar, J.,Simmons, L.A. Structural and biochemical characterization of the mitomycin C repair exonuclease MrfB. Nucleic Acids Res. 2024 52 6347 6359 8V9M 38630468 Human Ornithine Aminotransferase cocrystallized with its inhibitor, (R)-3-amino-5,5-difluorocyclohex-1-ene-1-carboxylic acid. 2023-12-08 2024-05-08 Devitt, A.N.,Vargas, A.L.,Zhu, W.,Des Soye, B.J.,Butun, F.A.,Alt, T.,Kaley, N.,Ferreira, G.M.,Moran, G.R.,Kelleher, N.L.,Liu, D.,Silverman, R.B. Design, Synthesis, and Mechanistic Studies of ( R )-3-Amino-5,5-difluorocyclohex-1-ene-1-carboxylic Acid as an Inactivator of Human Ornithine Aminotransferase. Acs Chem.Biol. 2024 19 1066 1081 8VXU 38865266 Crystal structure of Gdx-Clo A60T from Small Multidrug Resistance family of transporters in complex with cetyltrimetylammonium 2024-02-06 2024-05-08 Burata, O.E.,O'Donnell, E.,Hyun, J.,Lucero, R.M.,Thomas, J.E.,Gibbs, E.M.,Reacher, I.,Carney, N.A.,Stockbridge, R.B. Peripheral positions encode transport specificity in the small multidrug resistance exporters. Proc.Natl.Acad.Sci.USA 2024 121 0 0 8V7H 38735473 Human DNA polymerase eta-DNA-araC-ended primer ternary complex:ground state at pH7.0 (K+ MES) with 1 Ca2+ ion 2023-12-04 2024-05-15 Chang, C.,Zhou, G.,Lee Luo, C.,Eleraky, S.,Moradi, M.,Gao, Y. Sugar ring alignment and dynamics underline cytarabine and gemcitabine inhibition on Pol eta catalyzed DNA synthesis. J.Biol.Chem. 2024 300 107361 107361 8V7K 38735473 Human DNA polymerase eta-DNA-araC-ended primer ternary complex:reaction with 10 mM Mn2+ for 1800s 2023-12-04 2024-05-15 Chang, C.,Zhou, G.,Lee Luo, C.,Eleraky, S.,Moradi, M.,Gao, Y. Sugar ring alignment and dynamics underline cytarabine and gemcitabine inhibition on Pol eta catalyzed DNA synthesis. J.Biol.Chem. 2024 300 107361 107361 8W26 38750792 X-ray crystal structure of the GAF-PHY domains of SyB-Cph1 2024-02-20 2024-05-22 Burgie, E.S.,Mickles, A.J.,Luo, F.,Miller, M.D.,Vierstra, R.D. Crystal structure of the photosensory module from a PAS-less cyanobacterial phytochrome as Pr shows a mix of dark-adapted and photoactivated features. J.Biol.Chem. 2024 300 107369 107369 8SV2 Pasteurella multocida alpha2,3/2,6 sialyltransferase D141N bound to CMP 2023-05-15 2024-05-29 Stubbs, H.E.,Iverson, T.M. Pasteurella multocida alpha2,3/2,6 sialyltransferase D141N bound to CMP To Be Published 0 0 0 0 8TLV 38747396 Crystal structure of MBP and AF9 AHD fusion protein 4AQK in complex with peptidomimetic inhibitor 28 2023-07-27 2024-05-29 Yang, Y.,Ahmad, E.,Premkumar, V.,Liu, A.,Ashikur Rahman, S.M.,Nikolovska-Coleska, Z. Structural studies of intrinsically disordered MLL-fusion protein AF9 in complex with peptidomimetic inhibitors. Protein Sci. 2024 33 0 0 8TLW 38747396 Crystal structure of MBP and AF9 AHD fusion protein 3AQA in complex with peptidomimetic inhibitor 28 2023-07-27 2024-05-29 Yang, Y.,Ahmad, E.,Premkumar, V.,Liu, A.,Ashikur Rahman, S.M.,Nikolovska-Coleska, Z. Structural studies of intrinsically disordered MLL-fusion protein AF9 in complex with peptidomimetic inhibitors. Protein Sci. 2024 33 0 0 8TLX 38747396 Crystal structure of MBP and AF9 AHD fusion protein 3AQA in complex with peptidomimetic inhibitor 21a 2023-07-27 2024-05-29 Yang, Y.,Ahmad, E.,Premkumar, V.,Liu, A.,Ashikur Rahman, S.M.,Nikolovska-Coleska, Z. Structural studies of intrinsically disordered MLL-fusion protein AF9 in complex with peptidomimetic inhibitors. Protein Sci. 2024 33 0 0 8FAQ 38890325 Structure of Hemagglutinin from Influenza A/Victoria/22/2020 2022-11-28 2024-06-19 Lei, R.,Liang, W.,Ouyang, W.O.,Hernandez Garcia, A.,Kikuchi, C.,Wang, S.,McBride, R.,Tan, T.J.C.,Sun, Y.,Chen, C.,Graham, C.S.,Rodriguez, L.A.,Shen, I.R.,Choi, D.,Bruzzone, R.,Paulson, J.C.,Nair, S.K.,Mok, C.K.P.,Wu, N.C. Epistasis mediates the evolution of the receptor binding mode in recent human H3N2 hemagglutinin. Nat Commun 2024 15 5175 5175 8TCS 38898276 Structure of trehalose bound Alistipes sp. 3-Keto-beta-glucopyranoside-1,2-Lyase AL1 2023-07-02 2024-06-19 Nasseri, S.A.,Lazarski, A.C.,Lemmer, I.L.,Zhang, C.Y.,Brencher, E.,Chen, H.M.,Sim, L.,Panwar, D.,Betschart, L.,Worrall, L.J.,Brumer, H.,Strynadka, N.C.J.,Withers, S.G. An alternative broad-specificity pathway for glycan breakdown in bacteria. Nature 2024 631 199 206 8TDH 38898276 Structure of trehalose bound Alistipes sp. Glucoside-3-dehydrogenase AL3 2023-07-03 2024-06-19 Nasseri, S.A.,Lazarski, A.C.,Lemmer, I.L.,Zhang, C.Y.,Brencher, E.,Chen, H.M.,Sim, L.,Panwar, D.,Betschart, L.,Worrall, L.J.,Brumer, H.,Strynadka, N.C.J.,Withers, S.G. An alternative broad-specificity pathway for glycan breakdown in bacteria. Nature 2024 631 199 206 8UY1 38886362 Methylenetetrahydrofolate reductase from Chaetomium thermophilum DSM 1495, Active (R) State 2023-11-12 2024-06-19 Yamada, K.,Mendoza, J.,Koutmos, M. Structural basis of S-adenosylmethionine-dependent allosteric transition from active to inactive states in methylenetetrahydrofolate reductase. Nat Commun 2024 15 5167 5167 8UY2 38886362 Methylenetetrahydrofolate reductase from Chaetomium thermophilum DSM 1495, AdoMet-bound, Inhibited (T) State 2023-11-12 2024-06-19 Yamada, K.,Mendoza, J.,Koutmos, M. Structural basis of S-adenosylmethionine-dependent allosteric transition from active to inactive states in methylenetetrahydrofolate reductase. Nat Commun 2024 15 5167 5167 8STC S127A variant of LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with Zinc and soaked with bicarbonate. 2023-05-09 2024-07-03 Chatterjee, S.,Rankin, J.A.,Hu, J.,Hausinger, R.P. S127A variant of LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with Zinc and soaked with bicarbonate. To be published 0 0 0 0 8V1O 38920289 Crystal structure of IRAK4 kinase domain with compound 4 2023-11-21 2024-07-03 Weiss, M.M.,Zheng, X.,Ji, N.,Browne, C.M.,Campbell, V.,Chen, D.,Enerson, B.,Fei, X.,Huang, X.,Klaus, C.R.,Li, H.,Mayo, M.,McDonald, A.A.,Paul, A.,Rong, H.,Sharma, K.,Shi, Y.,Slavin, A.,Walther, D.M.,Yuan, K.,Zhang, Y.,Zhu, X.,Kelleher, J.,Walker, D.,Mainolfi, N. Discovery of KT-413, a Targeted Protein Degrader of IRAK4 and IMiD Substrates Targeting MYD88 Mutant Diffuse Large B-Cell Lymphoma. J.Med.Chem. 2024 67 10548 10566 9C0O 39029460 Crystal structure of DmCfp1 PHD finger bound to H3K4me3 2024-05-27 2024-07-03 Gregoire, S.,Gregoire, J.,Yang, Y.,Capitani, S.,Joshi, M.,Sarvan, S.,Zaker, A.,Ning, Z.,Figeys, D.,Ulrich, K.,Brunzelle, J.S.,Mer, A.,Couture, J.F. Structural insights into an atypical histone binding mechanism by a PHD finger. Structure 2024 32 1498 0 8VNT 39141555 Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 1800s 2024-01-13 2024-07-10 Chang, C.,Zhou, G.,Gao, Y. Observing one-divalent-metal-ion-dependent and histidine-promoted His-Me family I-PpoI nuclease catalysis in crystallo. Elife 2024 13 0 0 8VOG 39096501 UIC-12-BIF extension of UIC-1 2024-01-15 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8VOL 36865152 Apex domain deletion mutant of bacteriophage P2 central spike protein, membrane-piercing module 2024-01-15 2024-08-07 Miller, J.M.,Knyazhanskaya, E.S.,Buth, S.A.,Prokhorov, N.S.,Leiman, P.G. Function of the bacteriophage P2 baseplate central spike Apex domain in the infection process. bioRxiv 2023 0 0 0 8VON 36865152 Double phenylalanine Apex domain mutant of bacteriophage P2 central spike protein, membrane-piercing module 2024-01-15 2024-08-07 Miller, J.M.,Knyazhanskaya, E.S.,Buth, S.A.,Prokhorov, N.S.,Leiman, P.G. Function of the bacteriophage P2 baseplate central spike Apex domain in the infection process. bioRxiv 2023 0 0 0 8VP7 39096501 UIC-13-BIF-A4(Dab) extension of UIC-1 2024-01-16 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8VPC 39096501 UIC-13-BIF extension of UIC-1 2024-01-16 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8VPD 39096501 UIC-11-BIF extension of UIC-1 2024-01-16 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8VPE 39096501 UIC-10-BIF extension of UIC-1 2024-01-16 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8VPJ 39096501 UIC-11-BPE extension of UIC-1 2024-01-16 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8VPT 39096501 UIC-14-BPE extension of UIC-1 2024-01-16 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8VPX 39096501 UIC-10-BPE extension of UIC-1 2024-01-17 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8VPZ 39096501 UIC-1-BPE1MER mutation of UIC-1-cap 2024-01-17 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8VQ0 39096501 UIC-13-MER extension of UIC-1 2024-01-17 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8VSF 39096501 UIC-13-BPE extension of UIC-1 2024-01-24 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8VT8 39096501 UIC-13-BIF-A4Dab NBD-Cl binding 2024-01-26 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8VW7 39096501 UIC-11-BPE-AgNO3 silver binding with UIC-11-BPE 2024-01-31 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8VW8 39096501 UIC-13-BPE-AgNO3 silver binding with UIC-13-BPE 2024-01-31 2024-08-07 Ganatra, P.,Wang, D.F.,Ganatra, V.,Dang, V.T.,Nguyen, A.I. Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons. J.Am.Chem.Soc. 2024 146 22236 22246 8U1Z Crystal structure of the Fis1 cytosolic domain bound to a peptide inhibitor 2023-09-04 2024-09-04 Nolden, K.A.,Kakarla, M.,Egner, J.M.,Wang, J.,Harwig, M.C.,Puppala, V.K.,Hofeld, B.C.,Arnold, L.A.,Trykall, D.Z.,Peterson, F.C.,Roberts, M.L.,Jenson, D.M.,Hill, R.B.,Widlansky, M.E. Novel Fis1 inhibiting peptide reverses microvascular endothelial dysfunction in vessels from humans with type 2 diabetes To Be Published 0 0 0 0 8VI8 39088332 Engineered glutamine binding protein and a cobaloxime ligand - no GLN bound 2024-01-03 2024-09-04 Fatima, S.,Mehrafrooz, B.,Boggs, D.G.,Ali, N.,Singh, S.,Thielges, M.C.,Bridwell-Rabb, J.,Aksimentiev, A.,Olshansky, L. Conformation-Dependent Hydrogen-Bonding Interactions in a Switchable Artificial Metalloprotein. Biochemistry 2024 63 2040 2050 8W8G 39634130 Crystal structure of human TRF1 with PinX1 2023-09-02 2024-09-04 Weng, Y.,Yan, X.,Chen, B.,Bian, Z.,Ge, Y.,Lu, H.,He, S.,Wu, J.,Chen, Y.,Lei, M.,Zhang, Y. PinX1 suppresses cancer progression by inhibiting telomerase activity in cervical squamous cell carcinoma and endocervical adenocarcinoma. Genes Dis 2025 12 101319 101319 9BNH 39152095 X-ray Crystal Structure of Cu-TZ4H tryptophan Zipper Metallo-Peptide 2024-05-02 2024-09-04 Thuc Dang, V.,Engineer, A.,McElheny, D.,Drena, A.,Telser, J.,Tomczak, K.,Nguyen, A.I. Crystallography Reveals Metal-Triggered Restructuring of beta-Hairpins. Chemistry 2024 30 0 0 9BNI 39152095 X-ray crystal structure of Cu-TZ4H-H3AH10D tryptophan zipper metallo-beta-sheet peptide 2024-05-02 2024-09-04 Thuc Dang, V.,Engineer, A.,McElheny, D.,Drena, A.,Telser, J.,Tomczak, K.,Nguyen, A.I. Crystallography Reveals Metal-Triggered Restructuring of beta-Hairpins. Chemistry 2024 30 0 0 9B3B Structure of TDP1 complexed with compound IB09 2024-03-18 2024-09-25 Lountos, G.T.,Zhao, X.Z.,Barakat, I.,Wang, W.,Agama, K.,Al Mahmud, M.R.,Pommier, Y.,Burke, T.R. Structure of TDP1 complexed with compound IB09 To Be Published 0 0 0 0 9BIG 39311434 Stat6 bound to degrader AK-1690 2024-04-23 2024-10-02 Kaneshige, A.,Yang, Y.,Bai, L.,Wang, M.,Xu, R.,Mallik, L.,Chinnaswamy, K.,Metwally, H.,Wang, Y.,McEachern, D.,Tosovic, J.,Yang, C.Y.,Kirchhoff, P.D.,Meagher, J.L.,Stuckey, J.A.,Wang, S. Discovery of AK-1690: A Potent and Highly Selective STAT6 PROTAC Degrader. J.Med.Chem. 2025 68 5125 5151 9BT4 39265575 Pyruvate:Ferredoxin Oxidoreductase from Methanosarcina acetivorans 2024-05-14 2024-10-09 Cossu, M.,Catlin, D.,Elliott, S.J.,Metcalf, W.W.,Nair, S.K. Structural organization of pyruvate: ferredoxin oxidoreductase from the methanogenic archaeon Methanosarcina acetivorans. Structure 2024 32 1963 0 8THQ 39373383 Nonamer RNA bound to hAgo2-PAZ 2023-07-17 2024-10-16 Aluri, K.C.,Datta, D.,Waldron, S.,Taneja, N.,Qin, J.,Donnelly, D.P.,Theile, C.S.,Guenther, D.C.,Lei, L.,Harp, J.M.,Pallan, P.S.,Egli, M.,Zlatev, I.,Manoharan, M. Single-Stranded Hairpin Loop RNAs (loopmeRNAs) Potently Induce Gene Silencing through the RNA Interference Pathway. J.Am.Chem.Soc. 2024 0 0 0 8VJT 39373474 Structure of the poly-UG quadruplex (GUGUGU)4 2024-01-08 2024-10-16 Roschdi, S.,Montemayor, E.J.,Vivek, R.,Bingman, C.A.,Butcher, S.E. Self-assembly and condensation of intermolecular poly(UG) RNA quadruplexes. Nucleic Acids Res. 2024 52 12582 12591 8UQU Crystal Structure of N-terminal Domain of Fic Family Protein from Bordetella bronchiseptica 2023-10-24 2024-10-30 Minasov, G.,Shuvalova, L.,Brunzelle, J.S.,Kiryukhina, O.,Satchell, K.J.F. Crystal Structure of N-terminal Domain of Fic Family Protein from Bordetella bronchiseptica To Be Published 0 0 0 0 8VWL 39128725 Crystal structure of Vibrio cholerae NFeoB in the apo form 2024-02-01 2024-10-30 Lee, M.,Magante, K.,Gomez-Garzon, C.,Payne, S.M.,Smith, A.T. Structural determinants of Vibrio cholerae FeoB nucleotide promiscuity. J.Biol.Chem. 2024 300 107663 107663 8VWN 39128725 Crystal structure of Vibrio cholerae NFeoB in the GDP-bound form 2024-02-01 2024-10-30 Lee, M.,Magante, K.,Gomez-Garzon, C.,Payne, S.M.,Smith, A.T. Structural determinants of Vibrio cholerae FeoB nucleotide promiscuity. J.Biol.Chem. 2024 300 107663 107663 8V90 39562775 TtgR variant 3A7 with naltrexone 2023-12-06 2024-12-11 Nishikawa, K.K.,Chen, J.,Acheson, J.F.,Harbaugh, S.V.,Huss, P.,Frenkel, M.,Novy, N.,Sieren, H.R.,Lodewyk, E.C.,Lee, D.H.,Chavez, J.L.,Fox, B.G.,Raman, S. Highly multiplexed design of an allosteric transcription factor to sense new ligands. Nat Commun 2024 15 10001 10001 8SHV 39805366 38B7 unliganded 2023-04-14 2024-12-25 Smith, S.A.,Shrem, R.A.,Lanca, B.B.C.,Zhang, J.,Wong, J.J.W.,Croote, D.,Peebles Jr., R.S.,Spiller, B.W. Structural determinants of peanut induced anaphylaxis. J.Allergy Clin.Immunol. 2025 0 0 0 8SJA 39805366 Ara H 6 13D9 16A8 2023-04-17 2024-12-25 Smith, S.A.,Shrem, R.A.,Lanca, B.B.C.,Zhang, J.,Wong, J.J.W.,Croote, D.,Peebles Jr., R.S.,Spiller, B.W. Structural determinants of peanut induced anaphylaxis. J.Allergy Clin.Immunol. 2025 0 0 0 9CN2 39846739 Human astrovirus 2 spike bound to neutralizing scFv 4B6 2024-07-15 2024-12-25 Lanning, S.,Aguilar-Hernandez, N.,Serrao, V.H.B.,Lopez, T.,O'Rourke, S.M.,Lentz, A.,Ricemeyer, L.,Espinosa, R.,Lopez, S.,Arias, C.F.,DuBois, R.M. Discovery of three novel neutralizing antibody epitopes on the human astrovirus capsid spike and mechanistic insights into virus neutralization. J.Virol. 2025 99 0 0 8W2X 39706336 TAS-120 covalent structure with FGFR2 2024-02-21 2025-01-01 Goyal, L.,DiToro, D.,Facchinetti, F.,Martin, E.E.,Peng, P.,Baiev, I.,Iyer, R.,Maurer, J.,Reyes, S.,Zhang, K.,Majeed, U.,Berchuck, J.E.,Chen, C.T.,Walmsley, C.,Pinto, C.,Vasseur, D.,Gordan, J.D.,Mody, K.,Borad, M.,Karasic, T.,Damjanov, N.,Danysh, B.P.,Wehrenberg-Klee, E.,Kambadakone, A.R.,Saha, S.K.,Hoffman, I.D.,Nelson, K.J.,Iyer, S.,Qiang, X.,Sun, C.,Wang, H.,Li, L.,Javle, M.,Lin, B.,Harris, W.,Zhu, A.X.,Cleary, J.M.,Flaherty, K.T.,Harris, T.,Shroff, R.T.,Leshchiner, I.,Parida, L.,Kelley, R.K.,Fan, J.,Stone, J.R.,Uboha, N.V.,Hirai, H.,Sootome, H.,Wu, F.,Bensen, D.C.,Hollebecque, A.,Friboulet, L.,Lennerz, J.K.,Getz, G.,Juric, D. A model for decoding resistance in precision oncology: acquired resistance to FGFR inhibitors in cholangiocarcinoma. Ann Oncol 2025 36 426 443 8W3D 39706336 TAS-120 covalent structure with FGFR2 molecular brake mutant 2024-02-22 2025-01-01 Goyal, L.,DiToro, D.,Facchinetti, F.,Martin, E.E.,Peng, P.,Baiev, I.,Iyer, R.,Maurer, J.,Reyes, S.,Zhang, K.,Majeed, U.,Berchuck, J.E.,Chen, C.T.,Walmsley, C.,Pinto, C.,Vasseur, D.,Gordan, J.D.,Mody, K.,Borad, M.,Karasic, T.,Damjanov, N.,Danysh, B.P.,Wehrenberg-Klee, E.,Kambadakone, A.R.,Saha, S.K.,Hoffman, I.D.,Nelson, K.J.,Iyer, S.,Qiang, X.,Sun, C.,Wang, H.,Li, L.,Javle, M.,Lin, B.,Harris, W.,Zhu, A.X.,Cleary, J.M.,Flaherty, K.T.,Harris, T.,Shroff, R.T.,Leshchiner, I.,Parida, L.,Kelley, R.K.,Fan, J.,Stone, J.R.,Uboha, N.V.,Hirai, H.,Sootome, H.,Wu, F.,Bensen, D.C.,Hollebecque, A.,Friboulet, L.,Lennerz, J.K.,Getz, G.,Juric, D. A model for decoding resistance in precision oncology: acquired resistance to FGFR inhibitors in cholangiocarcinoma. Ann Oncol 2025 36 426 443 8VXK 39720892 Crystal Structure of the Apo Bacillus subtilis GabR C-terminal Effector-binding and Oligomerization Domain 2024-02-05 2025-01-08 Kaley, N.E.,Liveris, Z.J.,Moore, M.,Reidl, C.T.,Wawrzak, Z.,Becker, D.P.,Liu, D. Bioisosteric replacement of pyridoxal-5'-phosphate to pyridoxal-5'-tetrazole targeting Bacillus subtilis GabR. Protein Sci. 2025 34 0 0 8VXL 39720892 Crystal Structure of the External Aldimine Complex of Pyridoxal-5'-Tetrazole and (S)-4-amino-5-phenoxypentanoate with the Bacillus subtilis GabR C-terminal Effector-binding and Oligomerization Domain 2024-02-05 2025-01-08 Kaley, N.E.,Liveris, Z.J.,Moore, M.,Reidl, C.T.,Wawrzak, Z.,Becker, D.P.,Liu, D. Bioisosteric replacement of pyridoxal-5'-phosphate to pyridoxal-5'-tetrazole targeting Bacillus subtilis GabR. Protein Sci. 2025 34 0 0 9D11 39745064 Smarca2 Bromodomain in complex with compound 22 2024-08-07 2025-01-15 Leng, L.,Tu, W.,Yang, L.,Huang, L.,Wang, M.,Meagher, J.L.,Chinnaswamy, K.,Allu, S.R.,Rej, R.K.,Tosovic, J.,Harikrishnan, L.,Li, Z.,Sui, Z.,Stuckey, J.A.,Wang, S. Discovery of High-Affinity SMARCA2/4 Bromodomain Ligands and Development of Potent and Exceptionally Selective SMARCA2 PROTAC Degraders. J.Med.Chem. 2025 68 1113 1133 9D12 39745064 Smarca2 Bromodomain in complex with compound 15 2024-08-07 2025-01-15 Leng, L.,Tu, W.,Yang, L.,Huang, L.,Wang, M.,Meagher, J.L.,Chinnaswamy, K.,Allu, S.R.,Rej, R.K.,Tosovic, J.,Harikrishnan, L.,Li, Z.,Sui, Z.,Stuckey, J.A.,Wang, S. Discovery of High-Affinity SMARCA2/4 Bromodomain Ligands and Development of Potent and Exceptionally Selective SMARCA2 PROTAC Degraders. J.Med.Chem. 2025 68 1113 1133 9DON 39811141 Crystal structure of eIF4e in complex with Compound 5-PA 2024-09-19 2025-01-29 Cardenas, E.L.,O'Rourke, R.L.,Menon, A.,Vega-Hernandez, G.,Meagher, J.,Stuckey, J.,Garner, A.L. Second-Generation Cap Analogue Prodrugs for Targeting Aberrant Eukaryotic Translation Initiation Factor 4E Activity in Cancer. Acs Med.Chem.Lett. 2025 16 96 100 9EIA 39651260 A broad-substrate spectrum lactate racemase A from Isosphaera pallida in complex with copurified D-lactate 2024-11-25 2025-01-29 Gatreddi, S.,Urdiain-Arraiza, J.,Desguin, B.,Hausinger, R.P.,Hu, J. Structural Basis for Catalysis and Substrate Specificity of a LarA Racemase with a Broad Substrate Spectrum. Biorxiv 2024 0 0 0 9D8N Q108K:K40L:T51V:T53C:R58W:Y19W:Q38L:Q4A:T29L mutant of hCRBPII bound to FR1V and irradiated with UV light at pH 4 2024-08-19 2025-02-12 Bingham, C.,Ehyaei, N.,Maity, S.,Cantrell, J.,Gwasdacus, J.,Sheng, W.,Vasileiou, C.,Borhan, B.,Geiger, J.H. Photoswitching fluorescence via a novel Trp-flap mechanism To Be Published 0 0 0 0 9DDU Q108K:K40L:T51V:T53C:R58Y:Y19W:Q38L:Q4A:T29L mutant of hCRBPII bound to FR1V and irradiated with UV light at pH 3.0 2024-08-28 2025-02-12 Bingham, C.,Ehyeai, N.,Maity, S.,Cantrell, J.,Gwasdacus, J.,Sheng, W.,Vasileiou, C.,Borhan, B.,Geiger, J.H. Photoswitching fluorescence via a novel Trp-flap mechanism To Be Published 0 0 0 0 9DF1 Q108K:K40L:T51V:T53C:R58Y:Y19W:Q38L:Q4A:T29L mutant of hCRBPII bound to FR1V and irradiated with UV light at pH 7.6 2024-08-29 2025-02-12 Bingham, C.,Ehyaei, N.,Maity, S.,Cantrell, J.,Gwasdacus, J.,Sheng, W.,Vasileiou, C.,Borhan, B.,Geiger, J.H. Photoswitching fluorescence via a novel Trp-flap mechanism To Be Published 0 0 0 0 9MGN 39919252 Crystal structure of PRMT5:MEP50 in complex with MTA and compound 41 2024-12-11 2025-03-05 Cottrell, K.M.,Whittington, D.A.,Briggs, K.J.,Jahic, H.,Ali, J.A.,Amor, A.J.,Gotur, D.,Tonini, M.R.,Zhang, W.,Huang, A.,Maxwell, J.P. MTA-Cooperative PRMT5 Inhibitors: Mechanism Switching Through Structure-Based Design. J.Med.Chem. 2025 68 4217 4236 9B8M 40035393 Crystal structure of ornithine decarboxylase in complex with a novel inhibitor 2024-03-31 2025-03-12 Schultz, C.R.,Aleiwi, B.,Zhou, X.E.,Suino-Powell, K.,Melcher, K.,Almeida, N.M.S.,Wilson, A.K.,Ellsworth, E.L.,Bachmann, A.S. Design, Synthesis, and Biological Activity of Novel Ornithine Decarboxylase (ODC) Inhibitors. J.Med.Chem. 2025 68 5760 5773 9B8N 40035393 Crystal structure of ornithine decarboxylase in complex with a novel inhibitor (10-S) 2024-03-31 2025-03-12 Schultz, C.R.,Aleiwi, B.,Zhou, X.E.,Suino-Powell, K.,Melcher, K.,Almeida, N.M.S.,Wilson, A.K.,Ellsworth, E.L.,Bachmann, A.S. Design, Synthesis, and Biological Activity of Novel Ornithine Decarboxylase (ODC) Inhibitors. J.Med.Chem. 2025 68 5760 5773 9KPM 39875337 Crystal structure of KRAS-G12C in complex with compound 16 (JAB-16) 2024-11-23 2025-03-12 Li, A.,Li, S.,Wang, P.,Dang, C.,Fan, X.,Chen, M.,Liu, D.,Li, F.,Liu, H.,Zhang, W.,Wang, Y.,Wang, Y. Design, Structure Optimization, and Preclinical Characterization of JAB-21822, a Covalent Inhibitor of KRAS G12C. J.Med.Chem. 2025 68 2422 2436 8U8C 39862860 Crystal structure of the TREX-2 complex in complex with the N-terminal motif of Sub2 2023-09-17 2025-03-19 Xie, Y.,Clarke, B.P.,Xie, D.,Mei, M.,Bhat, P.,Hill, P.S.,Angelos, A.E.,Cagatay, T.,Haider, M.,Collier, S.E.,Chambers, M.G.,Aksenova, V.,Dasso, M.,Fontoura, B.M.A.,Ren, Y. Structures and mRNP remodeling mechanism of the TREX-2 complex. Structure 2025 33 566 0 9N1T Crystal Structure of Human DAPK1 Catalytic Subunit Complexed with Compound SRM-26-100 2025-01-27 2025-03-26 Brunzelle, J.S.,Shuvalova, L.,Roy, S.M.,Watterson, D.M. Crystal Structure of Human DAPK1 Catalytic Subunit Complexed with Compound SRM-26-100 To Be Published 0 0 0 0 9EIR 40052306 Ethylene-forming enzyme apoprotein from Penicillium digitatum 2024-11-26 2025-04-02 Chatterjee, S.,Rankin, J.A.,Farrugia, M.A.,J S Rifayee, S.B.,Christov, C.Z.,Hu, J.,Hausinger, R.P. Biochemical, Structural, and Conformational Characterization of a Fungal Ethylene-Forming Enzyme. Biochemistry 2025 64 2054 2067 9EIS 40052306 Ethylene forming enzyme in complex with manganese and 2-oxoglutarate from Penicillium digitatum 2024-11-26 2025-04-02 Chatterjee, S.,Rankin, J.A.,Farrugia, M.A.,J S Rifayee, S.B.,Christov, C.Z.,Hu, J.,Hausinger, R.P. Biochemical, Structural, and Conformational Characterization of a Fungal Ethylene-Forming Enzyme. Biochemistry 2025 64 2054 2067 9N2M Crystal Structure of Human DAPK1 Catalytic Subunit Complexed with Compound MW01-30-047SRM 2025-01-29 2025-04-02 Brunzelle, J.S.,Shuvalova, L.,Roy, S.M.,Watterson, D.M. Crystal Structure of Human DAPK1 Catalytic Subunit Complexed with Compound MW01-30-047SRM To Be Published 0 0 0 0 9N2O Crystal Structure of Human DAPK1 Catalytic Subunit Complexed with Compound MW01-27-040SRM 2025-01-29 2025-04-02 Brunzelle, J.S.,Shuvalova, L.,Roy, S.M.,Watterson, D.M. Crystal Structure of Human DAPK1 Catalytic Subunit Complexed with Compound MW01-27-040SRM To Be Published 0 0 0 0 9NF1 cis-CaaD E114D mutant 2025-02-20 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD E114D apo To Be Published 0 0 0 0 9NF3 cis-CaaD E114D mutant with a covalent ethylene intermediate of the hydration and decarboxylation of cis-3-chloroacrylic acid 2025-02-20 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD E114D mutant with a covalent ethylene intermediate of the hydration and decarboxylation of acetylenecarboxylic acid To Be Published 0 0 0 0 9NF4 Cg10062 E114N mutant apo 2025-02-20 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. Cg10062 E114N mutant apo To Be Published 0 0 0 0 9NF6 Cg10062 E114N mutant with a covalent hydroxypropionate and acrylate intermediate of the hydration of acetylenecarboxylic acid 2025-02-20 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. Cg10062 E114N mutant with a covalent hydroxypropionate and acrylate intermediate of the hydration of acetylenecarboxylic acid To Be Published 0 0 0 0 9NF9 cis-CaaD E114N mutant apo 2025-02-21 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD E114N mutant apo To Be Published 0 0 0 0 9NFD cis-CaaD E114N mutant with acetylenecarboxylic acid substrate and hydration product malonic semialdehyde 2025-02-21 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD E114N mutant with acetylenecarboxylic acid substrate and hydration product malonic semialdehyde To Be Published 0 0 0 0 9NFF Native cis-CaaD with acetylenecarboxylic acid substrate 2025-02-21 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. Native cis-CaaD with acetylenecarboxylic acid substrate To Be Published 0 0 0 0 9NFH Native cis-CaaD 2025-02-21 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. Native cis-CaaD To Be Published 0 0 0 0 9NG4 cis-CaaD Y103F mutant apo 2025-02-21 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD Y103F mutant apo To Be Published 0 0 0 0 9NG7 cis-CaaD H28A mutant 2025-02-21 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD H28A mutant To Be Published 0 0 0 0 9NG8 cis-CaaD T34A mutant apo 2025-02-21 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD T34A mutant apo To Be Published 0 0 0 0 9NG9 cis-CaaD T34A mutant soaked with acetylenecarboxylic acid 2025-02-21 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD T34A mutant soaked with acetylenecarboxylic acid To Be Published 0 0 0 0 9NGA cis-CaaD T34A mutant soaked with cis-3-chloroacrylic acid 2025-02-21 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD T34A mutant soaked with cis-3-chloroacrylic acid To Be Published 0 0 0 0 9NGB truncated cis-CaaD 2025-02-21 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. truncated cis-CaaD To Be Published 0 0 0 0 9NGD cis-CaaD/Cg10062 chimera 2025-02-22 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD/Cg10062 chimera To Be Published 0 0 0 0 9NGH Cg10062 E114N mutant with acetylenecarboxylic acid 2025-02-22 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. Cg10062 E114N mutant with acetylenecarboxylic acid To Be Published 0 0 0 0 9NGL cis-CaaD E114Q 2025-02-22 2025-04-02 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD E114Q To Be Published 0 0 0 0 8YX0 Crystal structure of Procambarus clarkii Arginine kinase 2024-04-01 2025-04-09 Yang, Y.,Jin, T.C. Crystal structure of Procambarus clarkii Arginine kinase To Be Published 0 0 0 0 9DIN 40126472 Structure of ClpC1 N-terminal Domain complexed with semi-synthetic Rufomycin analog 2024-09-05 2025-04-16 Zhou, B.,Shetye, G.,Klein, L.L.,Wolf, N.M.,Lee, H.,McAlpine, J.B.,Harris, G.,Chen, S.N.,Suh, J.W.,Cho, S.H.,Franzblau, S.G.,Abad-Zapatero, C.,Pauli, G.F. Structure-Based Analysis of Semisynthetic Anti-TB Rufomycin Analogues. J.Nat.Prod. 2025 88 907 925 9O2N cis-CaaD Y103F mutant soaked with cis-3-chloroacrylic acid 2025-04-04 2025-04-16 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD Y103F mutant soaked with cis-3-chloroacrylic acid To Be Published 0 0 0 0 9EFY 40328673 Co-MAHF-9 A8G Metal Alpha-Helix Framework 2024-11-20 2025-05-21 Richardson-Matthews, R.,Velko, K.,Bhunia, B.,Ghosh, S.,Oktawiec, J.,Brunzelle, J.S.,Dang, V.T.,Nguyen, A.I. Metal-alpha-Helix Peptide Frameworks. J.Am.Chem.Soc. 2025 147 17433 17447 9EG0 40328673 Co-MAHF-9 Metal Alpha-Helix Framework 2024-11-20 2025-05-21 Richardson-Matthews, R.,Velko, K.,Bhunia, B.,Ghosh, S.,Oktawiec, J.,Brunzelle, J.S.,Dang, V.T.,Nguyen, A.I. Metal-alpha-Helix Peptide Frameworks. J.Am.Chem.Soc. 2025 147 17433 17447 9EG2 40328673 Co-MAHF-9 A8F Metal Alpha-Helix Framework 2024-11-20 2025-05-21 Richardson-Matthews, R.,Velko, K.,Bhunia, B.,Ghosh, S.,Oktawiec, J.,Brunzelle, J.S.,Dang, V.T.,Nguyen, A.I. Metal-alpha-Helix Peptide Frameworks. J.Am.Chem.Soc. 2025 147 17433 17447 9EG3 40328673 Co-MAHF-9 A8H Metal Alpha-Helix Framework 2024-11-20 2025-05-21 Richardson-Matthews, R.,Velko, K.,Bhunia, B.,Ghosh, S.,Oktawiec, J.,Brunzelle, J.S.,Dang, V.T.,Nguyen, A.I. Metal-alpha-Helix Peptide Frameworks. J.Am.Chem.Soc. 2025 147 17433 17447 9EG5 40328673 Co-MAHF-9 A8S Metal Alpha-Helix Framework 2024-11-20 2025-05-21 Richardson-Matthews, R.,Velko, K.,Bhunia, B.,Ghosh, S.,Oktawiec, J.,Brunzelle, J.S.,Dang, V.T.,Nguyen, A.I. Metal-alpha-Helix Peptide Frameworks. J.Am.Chem.Soc. 2025 147 17433 17447 9EHN 40328673 Co-MAHF-9 A8T Metal Alpha-Helix Framework 2024-11-23 2025-05-21 Richardson-Matthews, R.,Velko, K.,Bhunia, B.,Ghosh, S.,Oktawiec, J.,Brunzelle, J.S.,Dang, V.T.,Nguyen, A.I. Metal-alpha-Helix Peptide Frameworks. J.Am.Chem.Soc. 2025 147 17433 17447 9MDG 40328673 Co-MAHF-9 A8L Metal Alpha-Helix Framework 2024-12-05 2025-05-21 Richardson-Matthews, R.,Velko, K.,Bhunia, B.,Ghosh, S.,Oktawiec, J.,Brunzelle, J.S.,Dang, V.T.,Nguyen, A.I. Metal-alpha-Helix Peptide Frameworks. J.Am.Chem.Soc. 2025 147 17433 17447 9MKJ 40328673 Fe-MAHF-9 A8S Metal Alpha-Helix Framework 2024-12-17 2025-05-21 Richardson-Matthews, R.,Velko, K.,Bhunia, B.,Ghosh, S.,Oktawiec, J.,Brunzelle, J.S.,Dang, V.T.,Nguyen, A.I. Metal-alpha-Helix Peptide Frameworks. J.Am.Chem.Soc. 2025 147 17433 17447 9OWG Crystal Structure of the Immunity Protein (52 domain-containing protein) from Pseudomonas aeruginosa PAO1. 2025-06-02 2025-06-18 Minasov, G.,Wawrzak, Z.,Skarina, T.,Stogios, P.J.,Savchenko, A.,Satchell, K.F.,Center for Structural Biology of Infectious Diseases (CSBID) Crystal Structure of the Immunity Protein (52 domain-containing protein) from Pseudomonas aeruginosa PAO1. To Be Published 0 0 0 0 9CBP Methionine synthase from Thermus thermophilus HB8, Homocysteine, Folate, and Cobalamin Domains, Pre-Catalytic State (Pre-Hcy-on) 2024-06-19 2025-06-25 Mendoza, J.,Yamada, K.,Koutmos, M. Methionine synthase from Thermus thermophilus HB8, Homocysteine, Folate, and Cobalamin Domains, Pre-Catalytic State (Pre-Hcy-on) To Be Published 0 0 0 0 9NAC 40495786 Structure of HPK1 with C4 bound at its active site 2025-02-11 2025-06-25 Walters, B.T.,Patapoff, A.W.,Kiefer, J.R.,Wu, P.,Wang, W. Integrating Hydrogen Exchange with Molecular Dynamics for Improved Ligand Binding Predictions. J.Chem.Inf.Model. 2025 65 6144 6154 9P0F Crystal Structure of the C-terminal Cytoplasmic Domain of nsp4 from SARS-CoV-2 2025-06-06 2025-06-25 Minasov, G.,Shuvalova, L.,Brunzelle, J.S.,Satchell, K.J.F.,Center for Structural Biology of Infectious Diseases (CSBID) Crystal Structure of the C-terminal Cytoplasmic Domain of nsp4 from SARS-CoV-2 To Be Published 0 0 0 0 9DWO Crystal Structure of C4-Dicarboxylate-Binding Protein (PA0884) of Tripartite ATP-independent Periplasmic Transporter Family from Pseudomonas aeruginosa PAO1 in Complex with L-Malate 2024-10-09 2025-07-09 Minasov, G.,Shukla, S.,Shuvalova, L.,Satchell, K.J.F.,Center for Structural Biology of Infectious Diseases (CSBID) Crystal Structure of C4-Dicarboxylate-Binding Protein (PA0884) of Tripartite ATP-independent Periplasmic Transporter Family from Pseudomonas aeruginosa PAO1 in Complex with L-Malate To Be Published 0 0 0 0 9DWP Crystal Structure of C4-Dicarboxylate-Binding Protein (PA0884) of Tripartite ATP-independent Periplasmic Transporter Family from Pseudomonas aeruginosa PAO1 in Complex with Mesaconic Acid 2024-10-09 2025-07-09 Minasov, G.,Shukla, S.,Shuvalova, L.,Satchell, K.J.F.,Center for Structural Biology of Infectious Diseases (CSBID) Crystal Structure of C4-Dicarboxylate-Binding Protein (PA0884) of Tripartite ATP-independent Periplasmic Transporter Family from Pseudomonas aeruginosa PAO1 in Complex with Mesaconic Acid To Be Published 0 0 0 0 9DY3 Crystal Structure of C4-Dicarboxylate-Binding Periplasmic Protein (PA5167) of Tripartite ATP-independent Periplasmic Transporter Family from Pseudomonas aeruginosa PAO1 in Complex with L-Malate 2024-10-12 2025-07-09 Minasov, G.,Shukla, S.,Shuvalova, L.,Satchell, K.J.F.,Center for Structural Biology of Infectious Diseases (CSBID) Crystal Structure of C4-Dicarboxylate-Binding Periplasmic Protein (PA5167) of Tripartite ATP-independent Periplasmic Transporter Family from Pseudomonas aeruginosa PAO1 in Complex with L-Malate. To Be Published 0 0 0 0 9IME Pilin PilA from Burkholderia thailandensis with bromide ions 2024-07-03 2025-07-09 Lotangchanintra, T.,Wawrzak, Z.,Wangkanont, K. Pilin PilA from Burkholderia thailandensis with bromide ions To Be Published 0 0 0 0 9D8O Q108K:K40L:T51V:T53C:R58Y:Y19W:Q38L:Q4A:T29L mutant of hCRBPII in complex with FR1V in the dark state at pH 3.0 2024-08-19 2025-07-16 Bingham, C.,Ehyaei, N.,Maity, S.,Cantrell, J.,Gwasdacus, J.,Sheng, W.,Vasileiou, C.,Babak, B.,Geiger, J.H. Photoswitching fluorescence via a novel Trp-flap mechanism To Be Published 0 0 0 0 9C14 40669668 Structure of the CopC-like domain of YcnJ 2024-05-28 2025-08-06 de Oliveira Silva, Y.R.,Barnes, G.,Zheng, D.,Zhitnitsky, D.,Geathers, S.J.,Peters, S.C.,Szalai, V.A.,Helmann, J.D.,Fisher, O.S. Copper acquisition in Bacillus subtilis involves Cu(II) exchange between YcnI and YcnJ. J.Biol.Chem. 2025 301 110480 110480 9P6I 40981415 Crystal Structure of the Histidine Kinase VC2136 from Vibrio cholerae serotype O1 2025-06-19 2025-08-20 Stanton, V.,Himes, B.,Mejia-Santana, A.,Eppinger, M.,Romo, J.,Xing, J.,Zhulin, I.B.,Cai, H.,Wang, Y.,Inniss, N.l.,Minasov, G.,Satchell, K.J.F.,Klose, K.E. The PAS domain of the polarly localized histidine kinase FlrB in Vibrio cholerae controls class III flagellar transcription and contributes to intestinal colonization. Mbio 2025 16 0 0 9OVH 40761003 Structure of an ancestral ethylene forming enzyme, Anc357, in complex with Mn 2025-05-30 2025-08-27 Chatterjee, S.,Rankin, J.A.,Farrugia, M.A.,Delaney, B.J.,Pascual, N.S.,VanAntwerp, J.,Woldring, D.R.,Hu, J.,Hausinger, R.P. Ancestral Sequence Reconstruction of the Ethylene-Forming Enzyme. Biochemistry 2025 64 3432 3445 9DE1 Q108K:K40L:T51V:T53C:R58Y:Y19W:Q38L:Q4A:T29L mutant of hCRBPII bound to FR1V in the dark at pH 6.0 2024-08-28 2025-09-03 Bingham, C.,Ehyaei, N.,Maity, S.,Cantrell, J.,Gwasdacus, J.,Sheng, W.,Vasileiou, C.,Borhan, B.,Geiger, J.H. Photoswitching fluorescence via a novel Trp-flap mechanism To Be Published 0 0 0 0 9DF8 Q108K:K40L:T51V:T53C:R58A:Y19W:Q38L:Q4A:T29L mutant of hCRBPII bound to FR1V and irradiated with UV light at pH 3.0 2024-08-29 2025-09-03 Bingham, C.,Ehyai, N.,Maity, S.,Cantrell, J.,Gwasdacus, J.,Sheng, W.,Vasileiou, C.,Borhan, B.,Geiger, J.H. Photoswitching fluorescence via a novel Trp-flap mechanism To Be Published 0 0 0 0 9DFB Q108K:K40L:T51V:T53C:R58A:Y19W:Q38L:Q4A:T29L mutant of hCRBPII bound to FR1V in the dark at pH 3.0 2024-08-29 2025-09-03 Bingham, C.,Ehyaei, N.,Maity, S.,Cantrell, J.,Gwasdacus, J.,Sheng, W.,Vasileiou, C.,Borhan, B.,Geiger, J.H. Photoswitching fluorescence via a novel Trp-flap mechanism To Be Published 0 0 0 0 9DBP 40332031 Crystal structure of the LSD1/CoREST histone demethylase in complex with the cofactor FAD and the inhibitor GSK690 2024-08-23 2025-09-17 Wang, Y.,Yu, L.,Deng, K.,Packiarajan, M.,Aguilar, A.,An, S.,Liu, X.,Myers, G.,Oh, H.,Singh, S.A.,Cho, U.S.,Wang, S.,Guan, Y.,White, A.D.,Khoriaty, R.,Engel, J.D. Novel, potent, and orally bioavailable LSD1 inhibitors induce fetal hemoglobin synthesis in a sickle cell disease mouse model. Blood 2025 146 356 368 9PSV Q108K:K40L:T51V:T53S:R58W:Y19W:L117E mutant of hCRBPII bound to fluorophore TD-1V-7 2025-07-27 2025-10-01 Santos, E.,Ghanbarpour, A.,Chandra, I.,Bingam, C.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Exploring the Structure-Property Relationships of Protein/Fluorophore Complex To Be Published 0 0 0 0 9PSW Q108K:K40L:T51V:T53S:R58W:Y19W:L117E mutant of hCRBPII bound to fluorophore TD-1V-2 2025-07-27 2025-10-01 Santos, E.,Ghanbarpour, A.,Chandra, I.,Bingham, C.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Exploring the Structure-Property Relationships of Protein/Fluorophore Complex To Be Published 0 0 0 0 9PSY Q108K:K40L:T51V:T53S:R58W:Y19W:L117E mutant of hCRBPII bound to fluorophore TD-1V-1 2025-07-27 2025-10-01 Santos, E.,Ghanbarpour, A.,Chandra, I.,Bingham, C.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Exploring the Structure-Property Relationships of Protein/Fluorophore Complex To Be Published 0 0 0 0 9PSZ Q108K:K40L:T51V:T53S:R58W:Y19W:L117E mutant of hCRBPII bound to fluorophore TD-1V-6 2025-07-27 2025-10-01 Santos, E.,Ghanbarpour, A.,Chandra, I.,Bingham, C.,Vasileiou, C.,Geiger, J.H.,Borhan, C. Exploring the Structure-Property Relationships of Protein/Fluorophore Complex To Be Published 0 0 0 0 9PT0 Q108K:K40L:T51V:T53S:R58W:Y19W:L117E mutant of hCRBPII bound to fluorophore TD-1V-8 2025-07-27 2025-10-01 Santos, E.,Ghanbarpour, A.,Chandra, I.,Bingham, C.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Exploring the Structure-Property Relationships of Protein/Fluorophore Complex To Be Published 0 0 0 0 9PT1 Q108K:K40L:T51V:T53S:R58W:Y19W:L117E mutant of hCRBPII bound to fluorophore TD-1V-10 2025-07-27 2025-10-01 Santos, E.,Ghanbarpour, A.,Chandra, I.,Bingham, C.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Exploring the Structure-Property Relationships of Protein/Fluorophore Complex To Be Published 0 0 0 0 9C7O Crystal Structure of the Maize R ACT-like Domain 2024-06-10 2025-10-08 Silwal, J.,Ghanbarpour, A.,Lee, Y.S.,Geiger, J.H.,Grotewold, E. Crystal Structure of Maize R ACT-like domain To Be Published 0 0 0 0 9MR9 40991405 Crystal structure of AU-15330 in complex with the bromodomain of human BRM (SMARCA2) and pVHL:ElonginC:ElonginB 2025-01-07 2025-10-08 Hulse, M.,Wang, M.,Xu, C.,Carter, J.,Agarwal, A.,Lu, L.,Pitis, P.,Bhagwat, N.,Rager, J.,Kurian, J.,Basch, C.,Sivakumar, M.,Burtell, J.,Mondal, A.,Grego, A.,Moore, A.,Bachner, C.,Vykuntam, K.,Reichelderfer, A.,Park, J.,Cote, J.,Cowart, M.,Osinubi, O.P.,Bigot, L.,Da Silva, A.,Nobre, C.,Meteau, M.,Soares, M.,Tang, H.Y.,Bersch, K.,Dai, C.,Cao, G.,Shen, B.,Emm, T.,Ruepp, S.,Xavier, J.,Tankersley, C.,Heiser, D.,Lee, S.H.,Geeganage, S.,Ruggeri, B.,Lin, H.,Novotny, W.,Huang, J.,Vaddi, K.,Combs, A.,Scherle, P.,Ito, K. PRT3789 Is a First-in-Human SMARCA2-Selective Degrader That Induces Synthetic Lethality in SMARCA4-Mutated Cancers. Cancer Res. 2026 86 213 235 9E79 41188226 Crystal structure of the MIR domain of the S. cerevisiae mannosyltransferase Pmt4 2024-11-01 2025-10-15 Du, M.,Yuan, Z.,Kovach, A.,Lyu, M.,Li, H. Pmt4 recognizes two separate acceptor sites to O-mannosylate in the S/T-rich regions of substrate proteins. Nat Commun 2025 16 9726 9726 9E7A 41188226 Crystal structure of the MIR domain of the S. cerevisiae mannosyltransferase Pmt4 in Complex with Ccw5 2024-11-01 2025-10-15 Du, M.,Yuan, Z.,Kovach, A.,Lyu, M.,Li, H. Pmt4 recognizes two separate acceptor sites to O-mannosylate in the S/T-rich regions of substrate proteins. Nat Commun 2025 16 9726 9726 9PSX Q108K:K40L:T51V:T53S:R58W:Y19W:L117E mutant of hCRBPII bound to fluorophore TD-1V-3 2025-07-27 2025-10-29 Santos, E.,Ghanbarpour, A.,Chandra, I.,Bingham, C.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Exploring the Structure-Property Relationships of Protein/Fluorophore Complex To Be Published 0 0 0 0 9PT3 Q108K:K40L:T51V:T53S:R58W:Y19W:L117E mutant of hCRBPII bound to fluorophore TD-1V-9 2025-07-27 2025-10-29 Santos, E.,Ghanbarpour, A.,Chandra, I.,Bingham, C.,Vasileiou, C.,Geiger, J.H.,Borhan, B. Exploring the Structure-Property Relationships of Protein/Fluorophore Complex To Be Published 0 0 0 0 9YRJ Cis-CaaD E114Q mutant with a covalent hydroxypropionate intermediate of the hydration of acetylenecarboxylic acid 2025-10-16 2025-10-29 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD E114Q mutant with a covalent hydroxypropionate intermediate of the hydration of acetylenecarboxylic acid To Be Published 0 0 0 0 9YRI cis-CaaD E114Q mutant with covalent intermediates of the hydration and decarboxylation of acetylenecarboxylic acid 2025-10-16 2025-11-05 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD E114Q mutant To Be Published 0 0 0 0 9YTU cis-CaaD E114D mutant with a covalent intermediates of the hydration of acetylenecarboxylic acid 2025-10-21 2025-11-05 Silva, K.,Geiger, J.H.,Draths, K. cis-CaaD E114D mutant with a covalent intermediates of the hydration of acetylenecarboxylic acid To Be Published 0 0 0 0 9BZT UIC-1 bound to benzene 2024-05-24 2025-11-26 Heinz-Kunert, S.L.,Nguyen, A.I. Evolvable conformational diversity in assemblies of short peptides To Be Published 0 0 0 0 9BZU UIC-1 peptide with toluene bound 2024-05-24 2025-11-26 Heinz-Kunert, S.L.,Nguyen, A.I. Evolvable conformational diversity in assemblies of short peptides To Be Published 0 0 0 0 9BZY UIC-1 peptide bound with m-xylene 2024-05-24 2025-11-26 Heinz-Kunert, S.L.,Nguyen, A.I. Evolvable conformational diversity in assemblies of short peptides To Be Published 0 0 0 0 9BZZ UIC-1 peptide bound with ethylbenzene 2024-05-24 2025-11-26 Heinz-Kunert, S.L.,Nguyen, A.I. Evolvable conformational diversity in assemblies of short peptides To Be Published 0 0 0 0 9BBJ 41384615 M. tuberculosis ClpC1-NTD complexed with a click chemistry analog of Rufomycin 2024-04-05 2025-12-10 Ratia, K.,Jin, S.,Abad-Zapatero, C.,Shetye, G.S.,Demissie, R.,Qader, M.,Beautrait, A.,Nikolic, D.S.,Wolf, N.M.,Rubin, E.J.,Krandor, O.,Serbina, N.,Li, G.,Pauli, G.F.,Klein, L.L.,Cho, S.,Franzblau, S.G.,Fotouhi, N.,Kaneko, T.,Lee, H. Unique Interactions of Novel Rufomycin ""Click Chemistry"" Analogs with Mtb ClpC1 and Implications. J.Med.Chem. 2025 68 26298 26310 9PHS 41413306 Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with fusion inhibitor cyclic peptide CP141085 (CP1) 2025-07-09 2025-12-24 Kadam, R.U.,Juraszek, J.,Brandenburg, B.,Garg, D.,Zhu, X.,Jongeneelen, M.,Schepens, W.B.G.,Stoops, B.,Vermond, J.,Goutier, W.,Tang, C.,Blokland, S.,Vogels, R.,Friesen, R.H.E.,van Dongen, M.J.P.,Wilson, I.A. V H H antibody loop guides design of a synthetic macrocyclic peptide that potently blocks influenza virus membrane fusion. Npj Viruses 2025 3 83 83 9PUH 41521555 SARS-CoV-2 Papain-like Protease (PLpro) in complex with Fragment 11 2025-07-31 2026-01-21 Wei, Q.,Taylor, A.J.,Barmade, M.A.,Teuscher, K.B.,Chowdhury, S.,Apakama, C.,Anderson-Daniels, J.,Yongqing, Z.,Schultz, D.C.,Rietz, T.A.,South, T.M.,Crow, M.M.,Zhao, B.,Amporndanai, K.,Sensintaffar, J.L.,Phan, J.,Cherry, S.,Denison, M.,Lee, T.,Fesik, S.W. Discovery of Fragment-Based Inhibitors of SARS-CoV-2 PL Pro . J.Med.Chem. 2026 69 1419 1433 9PUY 41521555 SARS-CoV-2 Papain-like Protease (PLpro) in complex with Fragment 27 2025-07-31 2026-01-21 Wei, Q.,Taylor, A.J.,Barmade, M.A.,Teuscher, K.B.,Chowdhury, S.,Apakama, C.,Anderson-Daniels, J.,Yongqing, Z.,Schultz, D.C.,Rietz, T.A.,South, T.M.,Crow, M.M.,Zhao, B.,Amporndanai, K.,Sensintaffar, J.L.,Phan, J.,Cherry, S.,Denison, M.,Lee, T.,Fesik, S.W. Discovery of Fragment-Based Inhibitors of SARS-CoV-2 PL Pro . J.Med.Chem. 2026 69 1419 1433