PDB_ID PUBMED_CID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS CITATION TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 1N7S 12496247 High Resolution Structure of a Truncated Neuronal SNARE Complex 2002-11-16 2002-12-27 Ernst, J.A.,Brunger, A.T. High Resolution Structure, Stability, and Synaptotagmin Binding of a Truncated Neuronal SNARE Complex J.Biol.Chem. 2003 278 8630 8636 1N7D 12459547 Extracellular domain of the LDL receptor 2002-11-13 2003-01-21 Rudenko, G.,Henry, L.,Henderson, K.,Ichtchenko, K.,Brown, M.S.,Goldstein, J.L.,Deisenhofer, J. Structure of the LDL receptor extracellular domain at endosomal pH Science 2002 298 2353 2358 1OPL 12654251 Structural basis for the auto-inhibition of c-Abl tyrosine kinase 2003-03-06 2003-04-08 Nagar, B.,Hantschel, O.,Young, M.A.,Scheffzek, K.,Veach, D.,Bornmann, W.,Clarkson, B.,Superti-Furga, G.,Kuriyan, J. Structural basis for the autoinhibition of c-Abl tyrosine kinase Cell(Cambridge,Mass.) 2003 112 859 871 1O0A 12691752 BACTERIORHODOPSIN L INTERMEDIATE AT 1.62 A RESOLUTION 2003-02-20 2003-04-22 Lanyi, J.K.,Schobert, B. Mechanism of proton transport in bacteriorhodopsin from crystallographic structures of the K, L, M1, M2, and M2' intermediates of the photocycle. J.Mol.Biol. 2003 328 439 450 1OZN 12718853 1.5A Crystal Structure of the Nogo Receptor Ligand Binding Domain Reveals a Convergent Recognition Scaffold Mediating Inhibition of Myelination 2003-04-09 2003-05-20 He, X.L.,Bazan, J.F.,McDermott, G.,Park, J.B.,Wang, K.,Tessier-Lavigne, M.,He, Z.,Garcia, K.C. Structure of the Nogo Receptor Ectodomain. A Recognition module implicated in Myelin Inhibition. Neuron 2003 38 177 185 1HKX 12769848 Crystal structure of calcium/calmodulin-dependent protein kinase 2003-03-12 2003-06-02 Hoelz, A.,Nairn, A.C.,Kuriyan, J. Crystal Structure of a Tetradecameric Assembly of the Association Domain of Ca2+/Calmodulin-Dependent Kinase II Mol.Cell 2003 11 1241 0 1OMW 12764189 Crystal Structure of the complex between G Protein-Coupled Receptor Kinase 2 and Heterotrimeric G Protein beta 1 and gamma 2 subunits 2003-02-26 2003-06-03 Lodowski, D.T.,Pitcher, J.A.,Capel, W.D.,Lefkowitz, R.J.,Tesmer, J.J.G. Keeping G proteins at Bay: A Complex Between G Protein-Coupled Receptor Kinase 2 and G-Beta-Gamma Science 2003 300 1256 1262 1P9M 12829785 Crystal structure of the hexameric human IL-6/IL-6 alpha receptor/gp130 complex 2003-05-12 2003-07-01 Boulanger, M.J.,Chow, D.C.,Brevnova, E.E.,Garcia, K.C. Hexameric Structure and Assembly of the Interleukin-6/IL-6 alpha-Receptor/gp130 Complex Science 2003 300 2101 2104 1P8H 12842471 BACTERIORHODOPSIN M1 INTERMEDIATE PRODUCED AT ROOM TEMPERATURE 2003-05-07 2003-07-07 Schobert, B.,Brown, L.S.,Lanyi, J.K. Crystallographic Structures of the M and N Intermediates of Bacteriorhodopsin: Assembly of a Hydrogen-Bonded Chain of Water Molecules between Asp-96 and the Retinal Schiff Base J.Mol.Biol. 2003 330 553 570 1P9R 14556751 Crystal Structure of Vibrio cholerae putative NTPase EpsE 2003-05-12 2003-10-14 Robien, M.A.,Krumm, B.E.,Sandkvist, M.,Hol, W.G.J. Crystal structure of the extracellular protein secretion NTPase EpsE of Vibrio cholerae J.Mol.Biol. 2003 333 657 674 1P9W 14556751 Crystal Structure of Vibrio cholerae putative NTPase EpsE 2003-05-12 2003-10-14 Robien, M.A.,Krumm, B.E.,Sandkvist, M.,Hol, W.G.J. Crystal structure of the extracellular protein secretion NTPase EpsE of Vibrio cholerae J.Mol.Biol. 2003 333 657 674 1PVH 14527405 Crystal structure of leukemia inhibitory factor in complex with gp130 2003-06-27 2003-10-14 Boulanger, M.J.,Bankovich, A.J.,Kortemme, T.,Baker, D.,Garcia, K.C. Convergent mechanisms for recognition of divergent cytokines by the shared signaling receptor gp130. Mol.Cell 2003 12 577 589 1QYS 14631033 Crystal structure of Top7: A computationally designed protein with a novel fold 2003-09-11 2003-11-25 Kuhlman, B.,Dantas, G.,Ireton, G.C.,Varani, G.,Stoddard, B.L.,Baker, D. Design of a Novel Globular Protein Fold with Atomic-Level Accuracy Science 2003 302 1364 1368 1R5X 14737182 JAMM: A Metalloprotease-like Zinc Site in the Proteasome and Signalosome 2003-10-13 2003-11-25 Ambroggio, X.I.,Rees, D.C.,Deshaies, R.J. JAMM: a metalloprotease-like zinc site in the proteasome and signalosome. Plos Biol. 2004 2 0 0 1PV2 14691241 Native Form 2 E.coli Chaperone Hsp31 2003-06-26 2004-01-13 Quigley, P.M.,Korotkov, K.,Baneyx, F.,Hol, W.G.J. A new native EcHsp31 structure suggests a key role of structural flexibility for chaperone function. Protein Sci. 2004 13 269 277 1S6C 14980206 Crystal structure of the complex between KChIP1 and Kv4.2 N1-30 2004-01-23 2004-02-24 Zhou, W.,Qian, Y.,Kunjilwar, K.,Pfaffinger, P.J.,Choe, S. Structural insights into the functional interaction of KChIP1 with Shal-type K(+) channels. Neuron 2004 41 573 586 1SMM 15067525 Crystal Structure of Cp Rd L41A mutant in oxidized state 2004-03-09 2004-03-16 Park, I.Y.,Youn, B.,Harley, J.L.,Eidsness, M.K.,Smith, E.,Ichiye, T.,Kang, C. The unique hydrogen bonded water in the reduced form of Clostridium pasteurianum rubredoxin and its possible role in electron transfer J.BIOL.INORG.CHEM. 2004 9 423 428 1SMU 15067525 Crystal Structure of Cp Rd L41A mutant in reduced state 1 (drop-reduced) 2004-03-09 2004-03-16 Park, I.Y.,Youn, B.,Harley, J.L.,Eidsness, M.K.,Smith, E.,Ichiye, T.,Kang, C. The unique hydrogen bonded water in the reduced form of Clostridium pasteurianum rubredoxin and its possible role in electron transfer J.BIOL.INORG.CHEM. 2004 9 423 428 1SMW 15067525 Crystal Structure of Cp Rd L41A mutant in reduced state 2 (soaked) 2004-03-09 2004-03-16 Park, I.Y.,Youn, B.,Harley, J.L.,Eidsness, M.K.,Smith, E.,Ichiye, T.,Kang, C. The unique hydrogen bonded water in the reduced form of Clostridium pasteurianum rubredoxin and its possible role in electron transfer J.BIOL.INORG.CHEM. 2004 9 423 428 1VJG Crystal structure of a gdsl-like lipase (alr1529) from nostoc sp. pcc 7120 at 2.01 A resolution 2004-02-19 2004-03-16 Joint Center for Structural Genomics (JCSG) Crystal structure of putative lipase from the G-D-S-L family from Nostoc sp. at 2.01 A resolution To be published 0 0 0 0 1VJQ Designed protein based on backbone conformation of procarboxypeptidase-A (1AYE) with sidechains chosen for maximal predicted stability. 2004-03-19 2004-03-30 Kuhlman, B.,Dantas, G.,Merritt, E.A.,Baker, D. Designed protein based on backbone conformation of procarboxypeptidase-A (1AYE) with sidechains chosen for maximal predicted stability. To be Published 0 0 0 0 1RIQ 15053876 The crystal structure of the catalytic fragment of the alanyl-tRNA synthetase 2003-11-17 2004-04-06 Swairjo, M.A.,Otero, F.J.,Yang, X.-L.,Lovato, M.A.,Skene, R.J.,McRee, D.E.,Ribas De Pouplana, L.,Schimmel, P. Alanyl-tRNA Synthetase Crystal Structure and Design for Acceptor-Stem Recognition Mol.Cell 2004 13 829 841 1SQ6 16131758 Plasmodium falciparum homolog of Uridine phosphorylase/Purine nucleoside phosphorylase 2004-03-17 2004-04-06 Schnick, C.,Robien, M.A.,Brzozowski, A.M.,Dodson, E.J.,Murshudov, G.N.,Anderson, L.,Luft, J.R.,Mehlin, C.,Hol, W.G.,Brannigan, J.A.,Wilkinson, A.J. Structures of Plasmodium falciparum purine nucleoside phosphorylase complexed with sulfate and its natural substrate inosine. Acta Crystallogr.,Sect.D 2005 61 1245 1254 1VJU Coproporphyrinogen III oxidase from Leishmania major 2004-03-29 2004-04-13 Structural Genomics of Pathogenic Protozoa Consortium Coproporphyrinogen III oxidase from Leishmania major To be Published 0 0 0 0 1VK2 Crystal structure of Uracil-DNA glycosylase (TM0511) from Thermotoga maritima at 1.90 A resolution 2004-04-16 2004-05-04 Joint Center for Structural Genomics (JCSG) Crystal structure of Uracil-DNA glycosylase (TM0511) from Thermotoga maritima at 1.90 A resolution To be published 0 0 0 0 1VK3 16544324 Crystal structure of Phosphoribosylformylglycinamidine synthase II (TM1246) from Thermotoga maritima at 2.15 A resolution 2004-04-23 2004-05-11 Mathews, I.I.,Krishna, S.S.,Schwarzenbacher, R.,McMullan, D.,Abdubek, P.,Ambing, E.,Canaves, J.M.,Chiu, H.J.,Deacon, A.M.,DiDonato, M.,Elsliger, M.A.,Godzik, A.,Grittini, C.,Grzechnik, S.K.,Hale, J.,Hampton, E.,Han, G.W.,Haugen, J.,Jaroszewski, L.,Klock, H.E.,Koesema, E.,Kreusch, A.,Kuhn, P.,Lesley, S.A.,Levin, I.,Miller, M.D.,Moy, K.,Nigoghossian, E.,Paulsen, J.,Quijano, K.,Reyes, R.,Spraggon, G.,Stevens, R.C.,van den Bedem, H.,Velasquez, J.,White, A.,Wolf, G.,Xu, Q.,Hodgson, K.O.,Wooley, J.,Wilson, I.A. Crystal structure of phosphoribosylformylglycinamidine synthase II (smPurL) from Thermotoga maritima at 2.15 A resolution. Proteins 2006 63 1106 1111 1SJ3 15141216 Hepatitis Delta Virus Gemonic Ribozyme Precursor, with Mg2+ Bound 2004-03-02 2004-05-18 Ke, A.,Zhou, K.,Ding, F.,Cate, J.H.,Doudna, J.A. A Conformational Switch controls hepatitis delta virus ribozyme catalysis Nature 2004 429 201 205 1VBY 15141216 Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, and Mn2+ bound 2004-03-03 2004-05-18 Ke, A.,Zhou, K.,Ding, F.,Cate, J.H.D.,Doudna, J.A. A Conformational Switch controls hepatitis delta virus ribozyme catalysis NATURE 2004 429 201 205 1VC0 15141216 Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Imidazole and Sr2+ solution 2004-03-03 2004-05-18 Ke, A.,Zhou, K.,Ding, F.,Cate, J.H.D.,Doudna, J.A. A Conformational Switch controls hepatitis delta virus ribozyme catalysis NATURE 2004 429 201 205 1VC5 15141216 Crystal Structure of the Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, in EDTA solution 2004-03-04 2004-05-18 Ke, A.,Zhou, K.,Ding, F.,Cate, J.H.D.,Doudna, J.A. A Conformational Switch controls hepatitis delta virus ribozyme catalysis NATURE 2004 429 201 205 1VK8 20471400 CRYSTAL STRUCTURE OF A PUTATIVE THIAMINE BIOSYNTHESIS/SALVAGE PROTEIN (TM0486) FROM THERMOTOGA MARITIMA AT 1.80 A RESOLUTION 2004-05-05 2004-05-18 Dermoun, Z.,Foulon, A.,Miller, M.D.,Harrington, D.J.,Deacon, A.M.,Sebban-Kreuzer, C.,Roche, P.,Lafitte, D.,Bornet, O.,Wilson, I.A.,Dolla, A. TM0486 from the hyperthermophilic anaerobe Thermotoga maritima is a thiamin-binding protein involved in response of the cell to oxidative conditions. J.Mol.Biol. 2010 400 463 476 1VK9 18275082 CRYSTAL STRUCTURE OF A DUF1893 family protein (TM1506) FROM THERMOTOGA MARITIMA AT 2.70 A RESOLUTION 2004-05-06 2004-05-18 Xu, Q.,Kozbial, P.,McMullan, D.,Krishna, S.S.,Brittain, S.M.,Ficarro, S.B.,DiDonato, M.,Miller, M.D.,Abdubek, P.,Axelrod, H.L.,Chiu, H.J.,Clayton, T.,Duan, L.,Elsliger, M.A.,Feuerhelm, J.,Grzechnik, S.K.,Hale, J.,Han, G.W.,Jaroszewski, L.,Klock, H.E.,Morse, A.T.,Nigoghossian, E.,Paulsen, J.,Reyes, R.,Rife, C.L.,van den Bedem, H.,White, A.,Hodgson, K.O.,Wooley, J.,Deacon, A.M.,Godzik, A.,Lesley, S.A.,Wilson, I.A. Crystal structure of an ADP-ribosylated protein with a cytidine deaminase-like fold, but unknown function (TM1506), from Thermotoga maritima at 2.70 A resolution. Proteins 2008 71 1546 1552 1SG1 15131306 Crystal Structure of the Receptor-Ligand Complex between Nerve Growth Factor and the Common Neurotrophin Receptor p75 2004-02-22 2004-06-01 He, X.L.,Garcia, K.C. Structure of nerve growth factor complexed with the shared neurotrophin receptor p75 Science 2004 304 870 875 1SIW 15122898 Crystal structure of the apomolybdo-NarGHI 2004-03-01 2004-06-08 Rothery, R.A.,Bertero, M.G.,Cammack, R.,Palak, M.,Blasco, F.,Strynadka, N.C.,Weiner, J.H. The catalytic subunit of Escherichia coli nitrate reductase A contains a novel [4Fe-4S] cluster with a high-spin ground state Biochemistry 2004 43 5324 5333 1SOA 15181200 Human DJ-1 with sulfinic acid 2004-03-13 2004-06-22 Wilson, M.A.,Miller, D.W.,Ahmad, R.,McLendon, C.,Bandyopadhyay, S.,Baptista, M.J.,Ringe, D.,Petsko, G.A.,Cookson, M.R. The Parkinson's disease protein DJ-1 is neuroprotective due to cysteine-sulfinic acid-driven mitochondrial localization. Proc.Natl.Acad.Sci.USA 2004 101 9103 9108 1VKN Crystal structure of N-acetyl-gamma-glutamyl-phosphate reductase (TM1782) from Thermotoga maritima at 1.80 A resolution 2004-06-11 2004-06-22 Joint Center for Structural Genomics (JCSG) Crystal structure of N-acetyl-gamma-glutamyl-phosphate reductase (TM1782) from Thermotoga maritima at 1.80 A resolution To be published 0 0 0 0 1VKN Crystal structure of N-acetyl-gamma-glutamyl-phosphate reductase (TM1782) from Thermotoga maritima at 1.80 A resolution 2004-06-11 2004-06-22 Joint Center for Structural Genomics (JCSG) Crystal structure of N-acetyl-gamma-glutamyl-phosphate reductase (TM1782) from Thermotoga maritima at 1.80 A resolution To be published 0 0 0 0 1SXR 15223330 Drosophila Peptidoglycan Recognition Protein (PGRP)-SA 2004-03-31 2004-06-29 Reiser, J.B.,Teyton, L.,Wilson, I.A. Crystal structure of the Drosophila peptidoglycan recognition protein (PGRP)-SA at 1.56 A resolution J.Mol.Biol. 2004 340 909 917 1VKM 15822122 Crystal structure of an indigoidine synthase a (idga)-like protein (tm1464) from thermotoga maritima msb8 at 1.90 A resolution 2004-06-09 2004-06-29 Levin, I.,Miller, M.D.,Schwarzenbacher, R.,McMullan, D.,Abdubek, P.,Ambing, E.,Biorac, T.,Cambell, J.,Canaves, J.M.,Chiu, H.J.,Deacon, A.M.,DiDonato, M.,Elsliger, M.A.,Godzik, A.,Grittini, C.,Grzechnik, S.K.,Hale, J.,Hampton, E.,Han, G.W.,Haugen, J.,Hornsby, M.,Jaroszewski, L.,Karlak, C.,Klock, H.E.,Koesema, E.,Kreusch, A.,Kuhn, P.,Lesley, S.A.,Morse, A.,Moy, K.,Nigoghossian, E.,Ouyang, J.,Page, R.,Quijano, K.,Reyes, R.,Robb, A.,Sims, E.,Spraggon, G.,Stevens, R.C.,van den Bedem, H.,Velasquez, J.,Vincent, J.,Wang, X.,West, B.,Wolf, G.,Xu, Q.,Zagnitko, O.,Hodgson, K.O.,Wooley, J.,Wilson, I.A. Crystal structure of an indigoidine synthase A (IndA)-like protein (TM1464) from Thermotoga maritima at 1.90 A resolution reveals a new fold. Proteins 2005 59 864 868 1U4C 15544799 Structure of spindle checkpoint protein Bub3 2004-07-23 2004-08-03 Larsen, N.A.,Harrison, S.C. Crystal structure of the spindle assembly checkpoint protein Bub3 J.Mol.Biol. 2004 344 885 892 1SMX 15312761 Crystal structure of the S1 domain of RNase E from E. coli (native) 2004-03-09 2004-08-17 Schubert, M.,Edge, R.E.,Lario, P.,Cook, M.A.,Strynadka, N.C.,Mackie, G.A.,McIntosh, L.P. Structural characterization of the RNase E S1 domain and identification of its oligonucleotide-binding and dimerization interfaces. J.Mol.Biol. 2004 341 37 54 1SVV Initial Stuctural Analysis of Leishmania major Threonine Aldolase 2004-03-30 2004-08-17 Hol, W.G.J.,Robien, M.A.,Structural Genomics of Pathogenic Protozoa Consortium Initial Structural Analysis of Leishmania major Threonine Aldolase To be Published 0 0 0 0 1T3J 15297672 Mitofusin domain HR2 V686M/I708M mutant 2004-04-26 2004-08-17 Koshiba, T.,Detmer, S.A.,Kaiser, J.T.,Chen, H.,McCaffery, J.M.,Chan, D.C. Structural basis of mitochondrial tethering by mitofusin complexes Science 2004 305 858 862 1VL0 CRYSTAL STRUCTURE OF A DTDP-4-DEHYDRORHAMNOSE REDUCTASE, RFBD ORTHOLOG (CA_C2315) FROM CLOSTRIDIUM ACETOBUTYLICUM ATCC 824 AT 2.05 A RESOLUTION 2004-06-30 2004-08-17 Joint Center for Structural Genomics (JCSG) Crystal structure of DTDP-4-dehydrorhamnose reductase, rfbD ortholog (CAC2315) from Clostridium acetobutylicum at 2.05 A resolution To be published 0 0 0 0 1VL0 CRYSTAL STRUCTURE OF A DTDP-4-DEHYDRORHAMNOSE REDUCTASE, RFBD ORTHOLOG (CA_C2315) FROM CLOSTRIDIUM ACETOBUTYLICUM ATCC 824 AT 2.05 A RESOLUTION 2004-06-30 2004-08-17 Joint Center for Structural Genomics (JCSG) Crystal structure of DTDP-4-dehydrorhamnose reductase, rfbD ortholog (CAC2315) from Clostridium acetobutylicum at 2.05 A resolution To be published 0 0 0 0 1VL2 Crystal structure of Argininosuccinate synthase (TM1780) from Thermotoga maritima at 1.65 A resolution 2004-07-08 2004-08-17 Joint Center for Structural Genomics (JCSG) Crystal structure of Argininosuccinate synthase (TM1780) from Thermotoga maritima at 1.65 A resolution To be published 0 0 0 0 1U2M 15304217 Crystal Structure of Skp 2004-07-19 2004-08-24 Walton, T.A.,Sousa, M.C. Crystal Structure of Skp, a Prefoldin-like Chaperone that Protects Soluble and Membrane Proteins from Aggregation Mol.Cell 2004 15 367 374 1VKZ Crystal structure of Phosphoribosylamine--glycine ligase (TM1250) from Thermotoga maritima at 2.30 A resolution 2004-06-29 2004-08-24 Joint Center for Structural Genomics (JCSG) Crystal structure of Phosphoribosylamine--glycine ligase (TM1250) from Thermotoga maritima at 2.30 A resolution To be published 0 0 0 0 1VLM Crystal structure of SAM-dependent methyltransferase, possible histamine N-methyltransferase (TM1293) from Thermotoga maritima at 2.20 A resolution 2004-08-04 2004-08-24 Joint Center for Structural Genomics (JCSG) Crystal structure of SAM-dependent methyltransferase, possible histamine N-methyltransferase (TM1293) from Thermotoga maritima at 2.20 A resolution To be published 0 0 0 0 1VLM Crystal structure of SAM-dependent methyltransferase, possible histamine N-methyltransferase (TM1293) from Thermotoga maritima at 2.20 A resolution 2004-08-04 2004-08-24 Joint Center for Structural Genomics (JCSG) Crystal structure of SAM-dependent methyltransferase, possible histamine N-methyltransferase (TM1293) from Thermotoga maritima at 2.20 A resolution To be published 0 0 0 0 1VLP 16154095 Crystal structure of a putative nicotinate phosphoribosyltransferase (yor209c, npt1) from saccharomyces cerevisiae at 1.75 A resolution 2004-08-06 2004-08-24 Chappie, J.S.,Canaves, J.M.,Han, G.W.,Rife, C.L.,Xu, Q.,Stevens, R.C. The structure of a eukaryotic nicotinic acid phosphoribosyltransferase reveals structural heterogeneity among type II PRTases. Structure 2005 13 1385 1396 1T3B 15333920 X-ray Structure of DsbC from Haemophilus influenzae 2004-04-26 2004-09-07 Zhang, M.,Monzingo, A.F.,Segatori, L.,Georgiou, G.,Robertus, J.D. Structure of DsbC from Haemophilus influenzae. Acta Crystallogr.,Sect.D 2004 60 1512 1518 1VLL Crystal structure of alanine dehydrogenase (AF1665) from Archaeoglobus fulgidus at 2.80 A resolution 2004-08-03 2004-09-21 Joint Center for Structural Genomics (JCSG) Crystal structure of alanine dehydrogenase (AF1665) from Archaeoglobus fulgidus at 2.80 A resolution To be published 0 0 0 0 1VLV Crystal structure of Ornithine carbamoyltransferase (TM1097) from Thermotoga maritima at 2.25 A resolution 2004-08-16 2004-09-21 Joint Center for Structural Genomics (JCSG) Crystal structure of Ornithine carbamoyltransferase (TM1097) from Thermotoga maritima at 2.25 A resolution To be published 0 0 0 0 1X86 15331592 Crystal Structure of the DH/PH domains of Leukemia-associated RhoGEF in complex with RhoA 2004-08-17 2004-09-21 Kristelly, R.,Gao, G.,Tesmer, J.J. Structural determinants of RhoA binding and nucleotide exchange in leukemia-associated Rho guanine-nucleotide exchange factor. J.Biol.Chem. 2004 279 47352 47362 1T9O 15382226 Crystal Structure of V44G Cp Rubredoxin 2004-05-18 2004-10-05 Park, I.Y.,Eidsness, M.K.,Lin, I.J.,Gebel, E.B.,Youn, B.,Harley, J.L.,Machonkin, T.E.,Frederick, R.O.,Markley, J.L.,Smith, E.T.,Ichiye, T.,Kang, C. Crystallographic studies of V44 mutants of Clostridium pasteurianum rubredoxin: Effects of side-chain size on reduction potential. Proteins 2004 57 618 625 1T9P 15382226 Crystal Structure of V44A, G45P Cp Rubredoxin 2004-05-18 2004-10-05 Park, I.Y.,Eidsness, M.K.,Lin, I.J.,Gebel, E.B.,Youn, B.,Harley, J.L.,Machonkin, T.E.,Frederick, R.O.,Markley, J.L.,Smith, E.T.,Ichiye, T.,Kang, C. Crystallographic studies of V44 mutants of Clostridium pasteurianum rubredoxin: Effects of side-chain size on reduction potential. Proteins 2004 57 618 625 1VM8 Crystal structure of UDP-N-acetylglucosamine pyrophosphorylase (Agx2) from Mus musculus at 2.50 A resolution 2004-09-10 2004-10-05 Joint Center for Structural Genomics (JCSG) Crystal structure of UDP-N-acetylglucosamine pyrophosphorylase (Agx2) from Mus musculus at 2.50 A resolution To be published 0 0 0 0 1VM8 Crystal structure of UDP-N-acetylglucosamine pyrophosphorylase (Agx2) from Mus musculus at 2.50 A resolution 2004-09-10 2004-10-05 Joint Center for Structural Genomics (JCSG) Crystal structure of UDP-N-acetylglucosamine pyrophosphorylase (Agx2) from Mus musculus at 2.50 A resolution To be published 0 0 0 0 1VMI Crystal structure of Putative phosphate acetyltransferase (np_416953.1) from Escherichia coli k12 at 2.32 A resolution 2004-09-28 2004-10-12 Joint Center for Structural Genomics (JCSG) Crystal structure of Putative phosphate acetyltransferase (np_416953.1) from Escherichia coli k12 at 2.32 A resolution To be published 0 0 0 0 1VMI Crystal structure of Putative phosphate acetyltransferase (np_416953.1) from Escherichia coli k12 at 2.32 A resolution 2004-09-28 2004-10-12 Joint Center for Structural Genomics (JCSG) Crystal structure of Putative phosphate acetyltransferase (np_416953.1) from Escherichia coli k12 at 2.32 A resolution To be published 0 0 0 0 1XIQ Plasmodium falciparum Nucleoside diphosphate kinase B 2004-09-21 2004-10-12 Robien, M.A.,Bosch, J.,Hol, W.G.J.,Structural Genomics of Pathogenic Protozoa Consortium Crystal structure of Nucleoside diphosphate kinase B from Plasmodium falciparum To be Published 0 0 0 0 1SXG 15369672 Structural studies on the apo transcription factor form B. megaterium 2004-03-30 2004-10-19 Schumacher, M.A.,Allen, G.S.,Diel, M.,Seidel, G.,Hillen, W.,Brennan, R.G. Structural studies on the apo transcription factor form B. megaterium Cell(Cambridge,Mass.) 2004 118 731 741 1SXH 15369672 apo structure of B. megaterium transcription regulator 2004-03-30 2004-10-19 Schumacher, M.A.,Allen, G.S.,Diel, M.,Seidel, G.,Hillen, W.,Brennan, R.G. Structural studies on the apo transcription factor form B. megaterium Cell(Cambridge,Mass.) 2004 118 731 741 1SXI 15369672 Structure of apo transcription regulator B. megaterium 2004-03-30 2004-10-19 Schumacher, M.A.,Allen, G.S.,Diel, M.,Seidel, G.,Hillen, W.,Brennan, R.G. Structural studies on the apo transcription factor form B. megaterium Cell(Cambridge,Mass.) 2004 118 731 741 1VP4 Crystal structure of a putative aminotransferase (tm1131) from thermotoga maritima msb8 at 1.82 A resolution 2004-10-08 2004-10-26 Joint Center for Structural Genomics (JCSG) Crystal structure of Aminotransferase, putative (TM1131) from Thermotoga maritima at 1.82 A resolution To be published 0 0 0 0 1VP4 Crystal structure of a putative aminotransferase (tm1131) from thermotoga maritima msb8 at 1.82 A resolution 2004-10-08 2004-10-26 Joint Center for Structural Genomics (JCSG) Crystal structure of Aminotransferase, putative (TM1131) from Thermotoga maritima at 1.82 A resolution To be published 0 0 0 0 1XFD 15476821 Structure of a human A-type Potassium Channel Accelerating factor DPPX, a member of the dipeptidyl aminopeptidase family 2004-09-14 2004-10-26 Strop, P.,Bankovich, A.J.,Hansen, K.C.,Garcia, K.C.,Brunger, A.T. Structure of a human A-type potassium channel interacting protein DPPX, a member of the dipeptidyl aminopeptidase family J.Mol.Biol. 2004 343 1055 1065 1XSI 15501829 Structure of a Family 31 alpha glycosidase 2004-10-19 2004-10-26 Lovering, A.L.,Lee, S.S.,Kim, Y.W.,Withers, S.G.,Strynadka, N.C. Mechanistic and Structural Analysis of a Family 31 alpha-Glycosidase and Its Glycosyl-enzyme Intermediate J.Biol.Chem. 2005 280 2105 2115 1XSJ 15501829 Structure of a Family 31 alpha glycosidase 2004-10-19 2004-10-26 Lovering, A.L.,Lee, S.S.,Kim, Y.W.,Withers, S.G.,Strynadka, N.C. Mechanistic and Structural Analysis of a Family 31 alpha-Glycosidase and Its Glycosyl-enzyme Intermediate J.Biol.Chem. 2005 280 2105 2115 1XCD 15501918 Dimeric bovine tissue-extracted decorin, crystal form 1 2004-09-01 2004-11-02 Scott, P.G.,McEwan, P.A.,Dodd, C.M.,Bergmann, E.M.,Bishop, P.N.,Bella, J. Crystal structure of the dimeric protein core of decorin, the archetypal small leucine-rich repeat proteoglycan Proc.Natl.Acad.Sci.Usa 2004 101 15633 15638 1XD2 15507210 Crystal Structure of a ternary Ras:SOS:Ras*GDP complex 2004-09-03 2004-11-02 Sondermann, H.,Soisson, S.M.,Boykevisch, S.,Yang, S.S.,Bar-Sagi, D.,Kuriyan, J. Structural analysis of autoinhibition in the ras activator son of sevenless. Cell(Cambridge,Mass.) 2004 119 393 405 1XUU 15516336 Crystal structure of sialic acid synthase (NeuB) in complex with Mn2+ and Malate from Neisseria meningitidis 2004-10-26 2004-11-02 Gunawan, J.,Simard, D.,Gilbert, M.,Lovering, A.L.,Wakarchuk, W.W.,Tanner, M.E.,Strynadka, N.C. Structural and mechanistic analysis of sialic acid synthase NeuB from Neisseria meningitidis in complex with Mn2+, phosphoenolpyruvate, and N-acetylmannosaminitol. J.Biol.Chem. 2005 280 3555 3563 1XSK 15501829 Structure of a Family 31 alpha glycosidase glycosyl-enzyme intermediate 2004-10-19 2004-11-10 Lovering, A.L.,Lee, S.S.,Kim, Y.W.,Withers, S.G.,Strynadka, N.C. Mechanistic and Structural Analysis of a Family 31 {alpha}-Glycosidase and Its Glycosyl-enzyme Intermediate J.Biol.Chem. 2005 280 2105 2115 1XIW 15534202 Crystal structure of human CD3-e/d dimer in complex with a UCHT1 single-chain antibody fragment 2004-09-22 2004-11-16 Arnett, K.L.,Harrison, S.C.,Wiley, D.C. Crystal structure of a human CD3-epsilon/delta dimer in complex with a UCHT1 single-chain antibody fragment. Proc.Natl.Acad.Sci.USA 2004 101 16268 16273 1VPK Crystal structure of DNA polymerase III, beta subunit (TM0262) from Thermotoga maritima at 2.00 A resolution 2004-11-09 2004-11-23 Joint Center for Structural Genomics (JCSG) Crystal structure of DNA polymerase III, beta subunit (TM0262) from Thermotoga maritima at 2.00 A resolution To be published 0 0 0 0 1XKS 15557116 The crystal structure of the N-terminal domain of Nup133 reveals a beta-propeller fold common to several nucleoporins 2004-09-29 2004-12-07 Berke, I.C.,Boehmer, T.,Blobel, G.,Schwartz, T.U. Structural and functional analysis of Nup133 domains reveals modular building blocks of the nuclear pore complex. J.Cell Biol. 2004 167 591 597 1T7W 15477100 Zn-alpha-2-glycoprotein; CHO-ZAG PEG 400 2004-05-11 2004-12-21 Delker, S.L.,West Jr., A.P.,McDermott, L.,Kennedy, M.W.,Bjorkman, P.J. Crystallographic studies of ligand binding by Zn-alpha2-glycoprotein. J.Struct.Biol. 2004 148 205 213 1T7X 15477100 Zn-alpha-2-glycoprotein; refolded CHO-ZAG PEG 400 2004-05-11 2004-12-21 Delker, S.L.,West Jr., A.P.,McDermott, L.,Kennedy, M.W.,Bjorkman, P.J. Crystallographic studies of ligand binding by Zn-alpha2-glycoprotein. J.Struct.Biol. 2004 148 205 213 1T7Z 15477100 Zn-alpha-2-glycoprotein; baculo-ZAG no PEG, no glycerol 2004-05-11 2004-12-21 Delker, S.L.,West Jr., A.P.,McDermott, L.,Kennedy, M.W.,Bjorkman, P.J. Crystallographic studies of ligand binding by Zn-alpha2-glycoprotein. J.Struct.Biol. 2004 148 205 213 1XTF 15592454 neurotoxin BoNT/A E224Q Y366F mutant 2004-10-21 2004-12-21 Breidenbach, M.A.,Brunger, A.T. Substrate recognition strategy for botulinum neurotoxin serotype A Nature 2004 432 925 929 1XTG 15592454 Crystal structure of NEUROTOXIN BONT/A complexed with Synaptosomal-associated protein 25 2004-10-21 2004-12-21 Breidenbach, M.A.,Brunger, A.T. Substrate recognition strategy for botulinum neurotoxin serotype A Nature 2004 432 925 929 1VQ3 16865708 Crystal structure of Phosphoribosylformylglycinamidine synthase, purS subunit (EC 6.3.5.3) (TM1244) from Thermotoga maritima at 1.90 A resolution 2004-12-15 2004-12-28 Mathews, I.I.,Krishna, S.S.,Schwarzenbacher, R.,McMullan, D.,Jaroszewski, L.,Miller, M.D.,Abdubek, P.,Agarwalla, S.,Ambing, E.,Axelrod, H.L.,Canaves, J.M.,Carlton, D.,Chiu, H.J.,Clayton, T.,DiDonato, M.,Duan, L.,Elsliger, M.A.,Grzechnik, S.K.,Hale, J.,Hampton, E.,Haugen, J.,Jin, K.K.,Klock, H.E.,Koesema, E.,Kovarik, J.S.,Kreusch, A.,Kuhn, P.,Levin, I.,Morse, A.T.,Nigoghossian, E.,Okach, L.,Oommachen, S.,Paulsen, J.,Quijano, K.,Reyes, R.,Rife, C.L.,Spraggon, G.,Stevens, R.C.,van den Bedem, H.,White, A.,Wolf, G.,Xu, Q.,Hodgson, K.O.,Wooley, J.,Deacon, A.M.,Godzik, A.,Lesley, S.A.,Wilson, I.A. Crystal structure of phosphoribosylformyl-glycinamidine synthase II, PurS subunit (TM1244) from Thermotoga maritima at 1.90 A resolution. Proteins 2006 65 249 254 1Y63 Initial crystal structural analysis of a probable kinase from Leishmania major Friedlin 2004-12-03 2005-01-04 Robien, M.A.,Hol, W.G.J.,Structural Genomics of Pathogenic Protozoa Consortium (SGPP) Crystal structural analysis of a probable kinase from Leishmania major Friedlin To be Published 0 0 0 0 1SHZ 15665872 Crystal Structure of the p115RhoGEF rgRGS Domain in A Complex with Galpha(13):Galpha(i1) Chimera 2004-02-26 2005-01-18 Chen, Z.,Singer, W.D.,Sternweis, P.C.,Sprang, S.R. Structure of the p115RhoGEF rgRGS domain-Galpha13/i1 chimera complex suggests convergent evolution of a GTPase activator. Nat.Struct.Mol.Biol. 2005 12 191 197 1VQT Crystal structure of Orotidine 5'-phosphate decarboxylase (TM0332) from Thermotoga maritima at 2.00 A resolution 2005-01-04 2005-01-18 Joint Center for Structural Genomics (JCSG) Crystal structure of Orotidine 5'-phosphate decarboxylase (TM0332) from Thermotoga maritima at 2.00 A resolution To be published 0 0 0 0 1VQ1 Crystal structure of N5-glutamine methyltransferase, HemK(EC 2.1.1.-) (TM0488) from Thermotoga maritima at 2.80 A resolution 2004-12-02 2005-02-01 Joint Center for Structural Genomics (JCSG) Crystal structure of N5-glutamine methyltransferase, HemK(EC 2.1.1.-) (TM0488) from Thermotoga maritima at 2.80 A resolution To be published 0 0 0 0 1YJ8 Initial structural analysis of Plasmodium falciparum Glycerol-3-phosphate dehydrogenase 2005-01-13 2005-02-01 Robien, M.A.,Hol, W.G.J.,Medical Structural Genomics of Pathogenic Protozoa Initial structural analysis of Plasmodium falciparum Glycerol-3-phosphate dehydrogenase To be Published 0 0 0 0 1XIY 15701514 Crystal Structure of Plasmodium falciparum antioxidant protein (1-Cys peroxiredoxin) 2004-09-22 2005-02-15 Sarma, G.N.,Nickel, C.,Rahlfs, S.,Fischer, M.,Becker, K.,Karplus, P.A. Crystal structure of a novel Plasmodium falciparum 1-Cys peroxiredoxin. J.Mol.Biol. 2005 346 1021 1034 1YF9 Structural analysis of Leishmania major ubiquitin conjugating enzyme E2 2004-12-31 2005-02-22 Bosch, J.,Hol, W.G.J. Structural Analysis of Leishmania major ubiquitin conjugating enzyme E2 To be Published 0 0 0 0 1U4F 15723059 Crystal Structure of Cytoplasmic Domains of IRK1 (Kir2.1) channel 2004-07-24 2005-03-08 Pegan, S.,Arrabit, C.,Zhou, W.,Kwiatkowski, W.,Collins, A.,Slesinger, P.A.,Choe, S. Cytoplasmic domain structures of Kir2.1 and Kir3.1 show sites for modulating gating and rectification Nat.Neurosci. 2005 8 279 287 1VR5 Crystal structure of Oligopeptide ABC transporter, periplasmic oligopeptide-binding (TM1223) from THERMOTOGA MARITIMA at 1.73 A resolution 2005-02-11 2005-03-08 Joint Center for Structural Genomics (JCSG) Crystal structure of Oligopeptide ABC transporter, periplasmic oligopeptide-binding (TM1223) from THERMOTOGA MARITIMA at 1.73 A resolution To be published 0 0 0 0 1Y4Z 15615728 The crystal structure of Nitrate Reductase A, NarGHI, in complex with the Q-site inhibitor pentachlorophenol 2004-12-01 2005-03-08 Bertero, M.G.,Rothery, R.A.,Boroumand, N.,Palak, M.,Blasco, F.,Ginet, N.,Weiner, J.H.,Strynadka, N.C.J. Structural and Biochemical Characterization of a Quinol Binding Site of Escherichia coli Nitrate Reductase A J.Biol.Chem. 2005 280 14836 14843 1Y5I 15615728 The crystal structure of the NarGHI mutant NarI-K86A 2004-12-02 2005-03-08 Bertero, M.G.,Rothery, R.A.,Boroumand, N.,Palak, M.,Blasco, F.,Ginet, N.,Weiner, J.H.,Strynadka, N.C.J. Structural and Biochemical Characterization of a Quinol Binding Site of Escherichia coli Nitrate Reductase A J.Biol.Chem. 2005 280 14836 14843 1Y5N 15615728 The crystal structure of the NarGHI mutant NarI-K86A in complex with pentachlorophenol 2004-12-02 2005-03-08 Bertero, M.G.,Rothery, R.A.,Boroumand, N.,Palak, M.,Blasco, F.,Ginet, N.,Weiner, J.H.,Strynadka, N.C.J. Structural and Biochemical Characterization of a Quinol Binding Site of Escherichia coli Nitrate Reductase A J.Biol.Chem. 2005 280 14836 14843 1VR8 16948158 Crystal structure of GTP binding regulator (TM1622) from Thermotoga Maritima at 1.75 A resolution 2005-02-16 2005-03-15 Xu, Q.,Krishna, S.S.,McMullan, D.,Schwarzenbacher, R.,Miller, M.D.,Abdubek, P.,Agarwalla, S.,Ambing, E.,Astakhova, T.,Axelrod, H.L.,Canaves, J.M.,Carlton, D.,Chiu, H.J.,Clayton, T.,DiDonato, M.,Duan, L.,Elsliger, M.A.,Feuerhelm, J.,Grzechnik, S.K.,Hale, J.,Hampton, E.,Han, G.W.,Haugen, J.,Jaroszewski, L.,Jin, K.K.,Klock, H.E.,Knuth, M.W.,Koesema, E.,Kreusch, A.,Kuhn, P.,Morse, A.T.,Nigoghossian, E.,Okach, L.,Oommachen, S.,Paulsen, J.,Quijano, K.,Reyes, R.,Rife, C.L.,Spraggon, G.,Stevens, R.C.,van den Bedem, H.,White, A.,Wolf, G.,Hodgson, K.O.,Wooley, J.,Deacon, A.M.,Godzik, A.,Lesley, S.A.,Wilson, I.A. Crystal structure of an ORFan protein (TM1622) from Thermotoga maritima at 1.75 A resolution reveals a fold similar to the Ran-binding protein Mog1p. Proteins 2006 65 777 782 1VR9 CRYSTAL STRUCTURE OF A CBS DOMAIN PAIR/ACT DOMAIN PROTEIN (TM0892) FROM THERMOTOGA MARITIMA AT 1.70 A RESOLUTION 2005-02-17 2005-03-15 Joint Center for Structural Genomics (JCSG) Crystal structure of CBS domain protein/ACT domain protein (TM0892) from Thermotoga maritima at 1.70 A resolution To be published 0 0 0 0 1VRB Crystal structure of Putative asparaginyl hydroxylase (2636534) from Bacillus subtilis at 2.60 A resolution 2005-02-18 2005-03-15 Joint Center for Structural Genomics (JCSG) Crystal structure of Putative asparaginyl hydroxylase (2636534) from Bacillus subtilis at 2.60 A resolution To be published 0 0 0 0 1YR2 15738423 Structural and Mechanistic Analysis of Two Prolyl Endopeptidases: Role of Inter-Domain Dynamics in Catalysis and Specificity 2005-02-02 2005-03-15 Shan, L.,Mathews, I.I.,Khosla, C. Structural and Mechanistic Analysis of Two Prolyl Endopeptidases: Role of Interdomain Dynamics in Catalysis and Specificity Proc.Natl.Acad.Sci.USA 2005 102 3599 3604 1VRM 16779835 Crystal structure of the apbe protein (tm1553) from thermotoga maritima msb8 at 1.58 A resolution 2005-03-10 2005-03-22 Han, G.W.,Sri Krishna, S.,Schwarzenbacher, R.,McMullan, D.,Ginalski, K.,Elsliger, M.A.,Brittain, S.M.,Abdubek, P.,Agarwalla, S.,Ambing, E.,Astakhova, T.,Axelrod, H.,Canaves, J.M.,Chiu, H.J.,DiDonato, M.,Grzechnik, S.K.,Hale, J.,Hampton, E.,Haugen, J.,Jaroszewski, L.,Jin, K.K.,Klock, H.E.,Knuth, M.W.,Koesema, E.,Kreusch, A.,Kuhn, P.,Miller, M.D.,Morse, A.T.,Moy, K.,Nigoghossian, E.,Oommachen, S.,Ouyang, J.,Paulsen, J.,Quijano, K.,Reyes, R.,Rife, C.,Spraggon, G.,Stevens, R.C.,van den Bedem, H.,Velasquez, J.,Wang, X.,West, B.,White, A.,Wolf, G.,Xu, Q.,Hodgson, K.O.,Wooley, J.,Deacon, A.M.,Godzik, A.,Lesley, S.A.,Wilson, I.A. Crystal structure of the ApbE protein (TM1553) from Thermotoga maritima at 1.58 A resolution. Proteins 2006 64 1083 1090 1VRA Crystal structure of Arginine biosynthesis bifunctional protein argJ (10175521) from Bacillus halodurans at 2.00 A resolution 2005-02-17 2005-04-12 Joint Center for Structural Genomics (JCSG) Crystal structure of Arginine biosynthesis bifunctional protein argJ (10175521) from Bacillus halodurans at 2.00 A resolution To be published 0 0 0 0 1VRA Crystal structure of Arginine biosynthesis bifunctional protein argJ (10175521) from Bacillus halodurans at 2.00 A resolution 2005-02-17 2005-04-12 Joint Center for Structural Genomics (JCSG) Crystal structure of Arginine biosynthesis bifunctional protein argJ (10175521) from Bacillus halodurans at 2.00 A resolution To be published 0 0 0 0 1YM8 15784619 crystal structure of GZZ shows up puckering of the proline ring in the Xaa position. 2005-01-20 2005-04-19 Schumacher, M.,Mizuno, K.,Bachinger, H.P. The crystal structure of the collagen-like polypeptide (glycyl-4(R)-hydroxyprolyl-4(R)-hydroxyprolyl)9 at 1.55 A resolution shows up-puckering of the proline ring in the Xaa position. J.Biol.Chem. 2005 280 20397 20403 1YOD 15826670 Crystal structure of a water soluble analog of phospholamban 2005-01-27 2005-04-19 Slovic, A.M.,Stayrook, S.E.,North, B.,DeGrado, W.F. X-ray structure of a water-soluble analog of the membrane protein phospholamban: sequence determinants defining the topology of tetrameric and pentameric coiled coils. J.Mol.Biol. 2005 348 777 787 1Z0S 16242716 Crystal structure of an NAD kinase from Archaeoglobus fulgidus in complex with ATP 2005-03-02 2005-04-19 Liu, J.,Lou, Y.,Yokota, H.,Adams, P.D.,Kim, R.,Kim, S.H. Crystal Structures of an NAD Kinase from Archaeoglobus fulgidus in Complex with ATP, NAD, or NADP J.Mol.Biol. 2005 354 289 303 1Z2N 15837423 Inositol 1,3,4-trisphosphate 5/6-kinase complexed Mg2+/ADP 2005-03-08 2005-04-19 Miller, G.J.,Wilson, M.P.,Majerus, P.W.,Hurley, J.H. Specificity determinants in inositol polyphosphate synthesis: crystal structure of inositol 1,3,4-trisphosphate 5/6-kinase. Mol.Cell 2005 18 201 212 1Z2O 15837423 Inositol 1,3,4-trisphosphate 5/6-Kinase in complex with mg2+/ADP/Ins(1,3,4,6)P4 2005-03-08 2005-04-19 Miller, G.J.,Wilson, M.P.,Majerus, P.W.,Hurley, J.H. Specificity determinants in inositol polyphosphate synthesis: crystal structure of inositol 1,3,4-trisphosphate 5/6-kinase. Mol.Cell 2005 18 201 212 1Z2P 15837423 Inositol 1,3,4-trisphosphate 5/6-Kinase in complex with Mg2+/AMP-PCP/Ins(1,3,4)P3 2005-03-08 2005-04-19 Miller, G.J.,Wilson, M.P.,Majerus, P.W.,Hurley, J.H. Specificity determinants in inositol polyphosphate synthesis: crystal structure of inositol 1,3,4-trisphosphate 5/6-kinase. Mol.Cell 2005 18 201 212 1ZBT Crystal structure of Peptide chain release factor 1 (RF-1) (SMU.1085) from Streptococcus mutans at 2.34 A resolution 2005-04-08 2005-05-03 Joint Center for Structural Genomics (JCSG) Crystal structure of Peptide chain release factor 1 (RF-1) (SMU.1085) from Streptococcus mutans at 2.34 A resolution To be published 0 0 0 0 1U3H 15664161 Crystal structure of mouse TCR 172.10 complexed with MHC class II I-Au molecule at 2.4 A 2004-07-21 2005-05-17 Maynard, J.,Petersson, K.,Wilson, D.H.,Adams, E.J.,Blondelle, S.E.,Boulanger, M.J.,Wilson, D.B.,Garcia, K.C. Structure of an autoimmune T cell receptor complexed with class II peptide-MHC: insights into MHC bias and antigen specificity Immunity 2005 22 81 92 1Z5V 15917813 Crystal structure of human gamma-tubulin bound to GTPgammaS 2005-03-20 2005-05-31 Aldaz, H.,Rice, L.M.,Stearns, T.,Agard, D.A. Insights into microtubule nucleation from the crystal structure of human gamma-tubulin. Nature 2005 435 523 527 1Z5V 15917813 Crystal structure of human gamma-tubulin bound to GTPgammaS 2005-03-20 2005-05-31 Aldaz, H.,Rice, L.M.,Stearns, T.,Agard, D.A. Insights into microtubule nucleation from the crystal structure of human gamma-tubulin. Nature 2005 435 523 527 1Z5W 15917813 Crystal Structure of gamma-tubulin bound to GTP 2005-03-20 2005-05-31 Aldaz, H.,Rice, L.M.,Stearns, T.,Agard, D.A. Insights into microtubule nucleation from the crystal structure of human gamma-tubulin. Nature 2005 435 523 527 1YJ7 15931226 Crystal structure of enteropathogenic E.coli (EPEC) type III secretion system protein EscJ 2005-01-13 2005-06-07 Yip, C.K.,Kimbrough, T.G.,Felise, H.B.,Vuckovic, M.,Thomas, N.A.,Pfuetzner, R.A.,Frey, E.A.,Finlay, B.B.,Miller, S.I.,Strynadka, N.C. Structural characterization of the molecular platform for type III secretion system assembly. Nature 2005 435 702 707 1Y96 15939020 crystal structure of the Gemin6/Gemin7 heterodimer from the human SMN complex 2004-12-14 2005-06-21 Ma, Y.,Dostie, J.,Dreyfuss, G.,Van Duyne, G.D. The Gemin6-Gemin7 Heterodimer from the Survival of Motor Neurons Complex Has an Sm Protein-like Structure. Structure 2005 13 883 892 1ZUP CRYSTAL STRUCTURE OF A PUTATIVE NUCLEASE WITH A RIBONUCLEASE H-LIKE MOTIF FOLD (TM1739) FROM THERMOTOGA MARITIMA AT 2.20 A RESOLUTION 2005-05-31 2005-06-21 Joint Center for Structural Genomics (JCSG) Crystal structure of hypothetical protein (tm1739) from Thermotoga maritima at 2.20 A resolution To be published 0 0 0 0 1YM7 15865441 G Protein-Coupled Receptor Kinase 2 (GRK2) 2005-01-20 2005-07-05 Lodowski, D.T.,Barnhill, J.F.,Pyskadlo, R.M.,Ghirlando, R.,Sterne-Marr, R.,Tesmer, J.J.G. The role of Gbetagamma and domain interfaces in the activation of G protein-coupled receptor kinase 2 Biochemistry 2005 44 6958 6970 1Z9L 16004875 1.7 Angstrom Crystal Structure of the Rat VAP-A MSP Homology Domain 2005-04-03 2005-07-19 Kaiser, S.E.,Brickner, J.H.,Reilein, A.R.,Fenn, T.D.,Walter, P.,Brunger, A.T. Structural basis of FFAT motif-mediated ER targeting Structure 2005 13 1035 1045 1Z9O 16004875 1.9 Angstrom Crystal Structure of the Rat VAP-A MSP Homology Domain in Complex with the Rat ORP1 FFAT Motif 2005-04-03 2005-07-19 Kaiser, S.E.,Brickner, J.H.,Reilein, A.R.,Fenn, T.D.,Walter, P.,Brunger, A.T. Structural basis of FFAT motif-mediated ER targeting Structure 2005 13 1035 1045 1Z9O 16004875 1.9 Angstrom Crystal Structure of the Rat VAP-A MSP Homology Domain in Complex with the Rat ORP1 FFAT Motif 2005-04-03 2005-07-19 Kaiser, S.E.,Brickner, J.H.,Reilein, A.R.,Fenn, T.D.,Walter, P.,Brunger, A.T. Structural basis of FFAT motif-mediated ER targeting Structure 2005 13 1035 1045 2A0S Crystal structure of 6-pyruvoyl tetrahydropterin synthase (PTPS) from Plasmodium vivax at 2.2 A resolution 2005-06-16 2005-07-26 Bosch, J.,Hol, W.G.J.,Structural Genomics of Pathogenic Protozoa Consortium (SGPP) Crystal structure of 6-pyruvoyl tetrahydropterin synthase (PTPS) from Plasmodium vivax at 2.2 A resolution To be Published 0 0 0 0 1ZGP 16026155 Crystal Structure of the Discosoma Red Fluorescent Protein (DsRed) Variant K70M 2005-04-21 2005-08-02 Tubbs, J.L.,Tainer, J.A.,Getzoff, E.D. Crystallographic structures of discosoma red fluorescent protein with immature and mature chromophores: linking Peptide bond trans-cis isomerization and acylimine formation in chromophore maturation. Biochemistry 2005 44 9833 9840 2A18 16081736 carboxysome shell protein ccmK4, crystal form 2 2005-06-18 2005-08-09 Kerfeld, C.A.,Sawaya, M.R.,Tanaka, S.,Nguyen, C.V.,Phillips, M.,Beeby, M.,Yeates, T.O. Protein structures forming the shell of primitive bacterial organelles Science 2005 309 936 938 1YEX 16060667 Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin. 2004-12-28 2005-08-16 Parsonage, D.,Youngblood, D.S.,Sarma, G.N.,Wood, Z.A.,Karplus, P.A.,Poole, L.B. Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin. Biochemistry 2005 44 10583 10592 1YF0 16060667 Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin. 2004-12-29 2005-08-16 Parsonage, D.,Youngblood, D.S.,Sarma, G.N.,Wood, Z.A.,Karplus, P.A.,Poole, L.B. Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin. Biochemistry 2005 44 10583 10592 1ZLD 16214901 Crystal structure of a RGD-containing host-selective toxin: Pyrenophora tritici-repentis Ptr ToxA 2005-05-06 2005-08-16 Sarma, G.N.,Manning, V.A.,Ciuffetti, L.M.,Karplus, P.A. Structure of Ptr ToxA: An RGD-Containing Host-Selective Toxin from Pyrenophora tritici-repentis Plant Cell 2005 17 3190 3202 1ZLE 16214901 Crystal structure of a RGD-containing host-selective toxin: Pyrenophora tritici-repentis Ptr ToxA 2005-05-06 2005-08-16 Sarma, G.N.,Manning, V.A.,Ciuffetti, L.M.,Karplus, P.A. Structure of Ptr ToxA: An RGD-Containing Host-Selective Toxin from Pyrenophora tritici-repentis Plant Cell 2005 17 3190 3202 2AMH Crystal Structure of Maf-like Protein Tbru21784AAA from T.brucei 2005-08-09 2005-08-16 Caruthers, J.,Merritt, E.,Structural Genomics of Pathogenic Protozoa Consortium (SGPP) Crystal Structure of Maf-like Protein Tbru21784AAA from T.brucei To be Published 0 0 0 0 2AFI 16123301 Crystal Structure of MgADP bound Av2-Av1 Complex 2005-07-25 2005-09-06 Tezcan, F.A.,Kaiser, J.T.,Mustafi, D.,Walton, M.Y.,Howard, J.B.,Rees, D.C. Nitrogenase Complexes: Multiple Docking Sites for a Nucleotide Switch Protein Science 2005 309 1377 1380 2ASH Crystal structure of Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (tRNA-guanine (tm1561) from THERMOTOGA MARITIMA at 1.90 A resolution 2005-08-23 2005-09-06 Joint Center for Structural Genomics (JCSG) Crystal structure of Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (tRNA-guanine (tm1561) from THERMOTOGA MARITIMA at 1.90 A resolution To be published 0 0 0 0 2A2F 16155582 Crystal Structure of Sec15 C-terminal domain 2005-06-22 2005-09-13 Wu, S.,Mehta, S.Q.,Pichaud, F.,Bellen, H.J.,Quiocho, F.A. Sec15 interacts with Rab11 via a novel domain and affects Rab11 localization in vivo. Nat.Struct.Mol.Biol. 2005 12 879 885 2AJF 16166518 Structure of SARS coronavirus spike receptor-binding domain complexed with its receptor 2005-08-01 2005-09-20 Li, F.,Li, W.,Farzan, M.,Harrison, S.C. Structure of SARS coronavirus spike receptor-binding domain complexed with receptor. Science 2005 309 1864 1868 2B30 Initial Crystallographic Structural Analysis of a putative HAD/COF-like hydrolase from Plasmodium vivax 2005-09-19 2005-09-27 Robien, M.A.,Bosch, J.,Hol, W.G.J.,Structural Genomics of Pathogenic Protozoa Consortium (SGPP) Initial Crystallographic Structural Analysis of a putative HAD/COF-like hydrolase from Plasmodium vivax To be Published 0 0 0 0 2AF6 16139296 Crystal structure of Mycobacterium tuberculosis Flavin dependent thymidylate synthase (Mtb ThyX) in the presence of co-factor FAD and substrate analog 5-Bromo-2'-Deoxyuridine-5'-Monophosphate (BrdUMP) 2005-07-25 2005-10-04 Sampathkumar, P.,Turley, S.,Ulmer, J.E.,Rhie, H.G.,Sibley, C.H.,Hol, W.G. Structure of the Mycobacterium tuberculosis Flavin Dependent Thymidylate Synthase (MtbThyX) at 2.0A Resolution. J.Mol.Biol. 2005 352 1091 1104 2B4W Hypothetical protein from leishmania major 2005-09-26 2005-10-04 Holmes, M.A.,Merritt, E.A.,Structural Genomics of Pathogenic Protozoa Consortium (SGPP) Hypothetical protein from leishmania major TO BE PUBLISHED 0 0 0 0 2BYP 16193063 Crystal structure of Aplysia californica AChBP in complex with alpha- conotoxin ImI 2005-08-03 2005-10-05 Hansen, S.B.,Sulzenbacher, G.,Huxford, T.,Marchot, P.,Taylor, P.,Bourne, Y. Structures of Aplysia Achbp Complexes with Nicotinic Agonists and Antagonists Reveal Distinctive Binding Interfaces and Conformations. Embo J. 2005 24 3635 0 2BYS 16193063 CRYSTAL STRUCTURE OF ACHBP FROM APLYSIA CALIFORNICA IN complex with lobeline 2005-08-04 2005-10-05 Hansen, S.B.,Sulzenbacher, G.,Huxford, T.,Marchot, P.,Taylor, P.,Bourne, Y. Structures of Aplysia Achbp Complexes with Nicotinic Agonists and Antagonists Reveal Distinctive Binding Interfaces and Conformations. Embo J. 2005 24 3635 0 1Z3E 16249335 Crystal Structure of Spx in Complex with the C-terminal Domain of the RNA Polymerase Alpha Subunit 2005-03-11 2005-10-11 Newberry, K.J.,Nakano, S.,Zuber, P.,Brennan, R.G. Crystal structure of the Bacillus subtilis anti-alpha, global transcriptional regulator, Spx, in complex with the {alpha} C-terminal domain of RNA polymerase Proc.Natl.Acad.Sci.Usa 2005 102 15839 15844 1Z3E 16249335 Crystal Structure of Spx in Complex with the C-terminal Domain of the RNA Polymerase Alpha Subunit 2005-03-11 2005-10-11 Newberry, K.J.,Nakano, S.,Zuber, P.,Brennan, R.G. Crystal structure of the Bacillus subtilis anti-alpha, global transcriptional regulator, Spx, in complex with the {alpha} C-terminal domain of RNA polymerase Proc.Natl.Acad.Sci.Usa 2005 102 15839 15844 2B4G 18312275 dihydroorotate dehydrogenase 2005-09-23 2005-10-11 Arakaki, T.L.,Buckner, F.S.,Gillespie, J.R.,Malmquist, N.A.,Phillips, M.A.,Kalyuzhniy, O.,Luft, J.R.,Detitta, G.T.,Verlinde, C.L.,Van Voorhis, W.C.,Hol, W.G.,Merritt, E.A. Characterization of Trypanosoma brucei dihydroorotate dehydrogenase as a possible drug target; structural, kinetic and RNAi studies Mol.Microbiol. 2008 68 37 50 1Z91 16209951 x-ray crystal structure of apo-OhrRC15S in reduced form: MarR family protein 2005-03-31 2005-10-25 Hong, M.,Fuangthong, M.,Helmann, J.D.,Brennan, R.G. Structure of an OhrR-ohrA Operator Complex Reveals the DNA Binding Mechanism of the MarR Family. Mol.Cell 2005 20 131 141 1Z91 16209951 x-ray crystal structure of apo-OhrRC15S in reduced form: MarR family protein 2005-03-31 2005-10-25 Hong, M.,Fuangthong, M.,Helmann, J.D.,Brennan, R.G. Structure of an OhrR-ohrA Operator Complex Reveals the DNA Binding Mechanism of the MarR Family. Mol.Cell 2005 20 131 141 1Z9C 16209951 Crystal structure of OhrR bound to the ohrA promoter: Structure of MarR family protein with operator DNA 2005-04-01 2005-10-25 Hong, M.,Fuangthong, M.,Helmann, J.D.,Brennan, R.G. Structure of an OhrR-ohrA Operator Complex Reveals the DNA Binding Mechanism of the MarR Family. Mol.Cell 2005 20 131 141 1ZEV 16269545 Crystal Structure of a Pathogenic RNA: CUG Repeats 2005-04-19 2005-10-25 Mooers, B.H.,Logue, J.S.,Berglund, J.A. The structural basis of myotonic dystrophy from the crystal structure of CUG repeats. Proc.Natl.Acad.Sci.Usa 2005 102 16626 16631 2A0L 16223877 Crystal structure of KvAP-33H1 Fv complex 2005-06-16 2005-11-01 Lee, S.Y.,Lee, A.,Chen, J.,Mackinnon, R. Structure of the KvAP voltage-dependent K+ channel and its dependence on the lipid membrane. Proc.Natl.Acad.Sci.Usa 2005 102 15441 15446 2B94 Structural analysis of P knowlesi homolog of P falciparum PNP 2005-10-10 2005-11-01 Robien, M.A.,Bosch, J.,Hol, W.G.J.,Structural Genomics of Pathogenic Protozoa Consortium (SGPP) Structural analysis of P knowlesi homolog of P falciparum PNP To be Published 0 0 0 0 2ETJ Crystal structure of Ribonuclease HII (EC 3.1.26.4) (RNase HII) (tm0915) from THERMOTOGA MARITIMA at 1.74 A resolution 2005-10-27 2005-11-08 Joint Center for Structural Genomics (JCSG) Crystal structure of Ribonuclease HII (EC 3.1.26.4) (RNase HII) (tm0915) from THERMOTOGA MARITIMA at 1.74 A resolution To be published 0 0 0 0 1X88 Human Eg5 motor domain bound to Mg-ADP and monastrol 2004-08-17 2005-11-15 Maliga, Z.,Mitchison, T.J. Structural Basis of Eg5 Inhibition by Monastrol TO BE PUBLISHED 0 0 0 0 1X88 Human Eg5 motor domain bound to Mg-ADP and monastrol 2004-08-17 2005-11-15 Maliga, Z.,Mitchison, T.J. Structural Basis of Eg5 Inhibition by Monastrol TO BE PUBLISHED 0 0 0 0 2B3K 16274222 Crystal structure of Human Methionine Aminopeptidase Type I in the holo form 2005-09-20 2005-11-22 Addlagatta, A.,Hu, X.,Liu, J.O.,Matthews, B.W. Structural Basis for the Functional Differences between Type I and Type II Human Methionine Aminopeptidases(,). Biochemistry 2005 44 14741 14749 2B3L 16274222 Crystal structure of type I human methionine aminopeptidase in the apo form 2005-09-20 2005-11-22 Addlagatta, A.,Hu, X.,Liu, J.O.,Matthews, B.W. Structural Basis for the Functional Differences between Type I and Type II Human Methionine Aminopeptidases(,). Biochemistry 2005 44 14741 14749 2EVR 19217401 CRYSTAL STRUCTURE OF A PUTATIVE GAMMA-D-GLUTAMYL-L-DIAMINO ACID ENDOPEPTIDASE (NPUN_R0659) FROM NOSTOC PUNCTIFORME PCC 73102 AT 1.60 A RESOLUTION 2005-10-31 2005-11-22 Xu, Q.,Sudek, S.,McMullan, D.,Miller, M.D.,Geierstanger, B.,Jones, D.H.,Krishna, S.S.,Spraggon, G.,Bursalay, B.,Abdubek, P.,Acosta, C.,Ambing, E.,Astakhova, T.,Axelrod, H.L.,Carlton, D.,Caruthers, J.,Chiu, H.J.,Clayton, T.,Deller, M.C.,Duan, L.,Elias, Y.,Elsliger, M.A.,Feuerhelm, J.,Grzechnik, S.K.,Hale, J.,Won Han, G.,Haugen, J.,Jaroszewski, L.,Jin, K.K.,Klock, H.E.,Knuth, M.W.,Kozbial, P.,Kumar, A.,Marciano, D.,Morse, A.T.,Nigoghossian, E.,Okach, L.,Oommachen, S.,Paulsen, J.,Reyes, R.,Rife, C.L.,Trout, C.V.,van den Bedem, H.,Weekes, D.,White, A.,Wolf, G.,Zubieta, C.,Hodgson, K.O.,Wooley, J.,Deacon, A.M.,Godzik, A.,Lesley, S.A.,Wilson, I.A. Structural Basis of Murein Peptide Specificity of a gamma-D-Glutamyl-L-Diamino Acid Endopeptidase. Structure 2009 17 303 313 2C2D 16306039 Efficient and High Fidelity Incorporation of dCTP Opposite 7,8- Dihydro-8-oxodeoxyguanosine by Sulfolobus solfataricus DNA Polymerase Dpo4 2005-09-27 2005-11-29 Zang, H.,Irimia, A.,Choi, J.-Y.,Angel, K.C.,Loukachevitch, L.V.,Egli, M.,P Guengerich, F. Efficient and High Fidelity Incorporation of Dctp Opposite 7,8-Dihydro-8-Oxodeoxyguanosine by Sulfolobus Solfataricus DNA Polymerase Dpo4 J.Biol.Chem. 2006 281 2358 0 2F22 CRYSTAL STRUCTURE OF A PUTATIVE DNA DAMAGE-INDUCABLE (DINB) PROTEIN (BH3987) FROM BACILLUS HALODURANS AT 1.42 A RESOLUTION 2005-11-15 2005-12-20 Joint Center for Structural Genomics (JCSG) Crystal structure of BH3987 from Bacillus halodurans at 1.42 A resolution To be published 0 0 0 0 2F8M 16682767 Ribose 5-phosphate isomerase from Plasmodium falciparum 2005-12-02 2005-12-27 Holmes, M.A.,Buckner, F.S.,Van Voorhis, W.C.,Verlinde, C.L.,Mehlin, C.,Boni, E.,DeTitta, G.,Luft, J.,Lauricella, A.,Anderson, L.,Kalyuzhniy, O.,Zucker, F.,Schoenfeld, L.W.,Earnest, T.N.,Hol, W.G.,Merritt, E.A. Structure of ribose 5-phosphate isomerase from Plasmodium falciparum. Acta Crystallogr.,Sect.F 2006 62 427 431 2FEE 16316975 Structure of the Cl-/H+ exchanger CLC-ec1 from E.Coli in NaBr 2005-12-15 2006-01-03 Accardi, A.,Walden, M.P.,Nguitragool, W.,Jayaram, H.,Williams, C.,Miller, C. Separate ion pathways in a Cl-/H+ exchanger J.Gen.Physiol. 2005 126 563 570 2FG0 19217401 Crystal structure of a putative gamma-d-glutamyl-l-diamino acid endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.79 A resolution 2005-12-20 2006-01-10 Xu, Q.,Sudek, S.,McMullan, D.,Miller, M.D.,Geierstanger, B.,Jones, D.H.,Krishna, S.S.,Spraggon, G.,Bursalay, B.,Abdubek, P.,Acosta, C.,Ambing, E.,Astakhova, T.,Axelrod, H.L.,Carlton, D.,Caruthers, J.,Chiu, H.J.,Clayton, T.,Deller, M.C.,Duan, L.,Elias, Y.,Elsliger, M.A.,Feuerhelm, J.,Grzechnik, S.K.,Hale, J.,Won Han, G.,Haugen, J.,Jaroszewski, L.,Jin, K.K.,Klock, H.E.,Knuth, M.W.,Kozbial, P.,Kumar, A.,Marciano, D.,Morse, A.T.,Nigoghossian, E.,Okach, L.,Oommachen, S.,Paulsen, J.,Reyes, R.,Rife, C.L.,Trout, C.V.,van den Bedem, H.,Weekes, D.,White, A.,Wolf, G.,Zubieta, C.,Hodgson, K.O.,Wooley, J.,Deacon, A.M.,Godzik, A.,Lesley, S.A.,Wilson, I.A. Structural Basis of Murein Peptide Specificity of a gamma-D-Glutamyl-L-Diamino Acid Endopeptidase. Structure 2009 17 303 313 2FG9 CRYSTAL STRUCTURE OF A PUTATIVE 5-NITROIMIDAZOLE ANTIBIOTIC RESISTANCE PROTEIN (BT_3078) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 2.20 A RESOLUTION 2005-12-21 2006-01-10 Joint Center for Structural Genomics (JCSG) Crystal structure of (np_811990.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.20 A resolution To be published 0 0 0 0 1ZUN 16387658 Crystal Structure of a GTP-Regulated ATP Sulfurylase Heterodimer from Pseudomonas syringae 2005-05-31 2006-01-17 Mougous, J.D.,Lee, D.H.,Hubbard, S.C.,Schelle, M.W.,Vocadlo, D.J.,Berger, J.M.,Bertozzi, C.R. Molecular basis for g protein control of the prokaryotic ATP sulfurylase. Mol.Cell 2006 21 109 122 1ZUN 16387658 Crystal Structure of a GTP-Regulated ATP Sulfurylase Heterodimer from Pseudomonas syringae 2005-05-31 2006-01-17 Mougous, J.D.,Lee, D.H.,Hubbard, S.C.,Schelle, M.W.,Vocadlo, D.J.,Berger, J.M.,Bertozzi, C.R. Molecular basis for g protein control of the prokaryotic ATP sulfurylase. Mol.Cell 2006 21 109 122 2F8L Crystal structure of a putative class i s-adenosylmethionine-dependent methyltransferase (lmo1582) from listeria monocytogenes at 2.20 A resolution 2005-12-02 2006-01-17 Joint Center for Structural Genomics (JCSG) Crystal structure of (16411011) from Listeria monocytogenes LI2 at 2.20 A resolution To be published 0 0 0 0 2CCD 16566587 Crystal structure of the catalase-peroxidase (KatG) and S315T mutant from Mycobacterium tuberculosis 2006-01-16 2006-01-19 Zhao, X.,Yu, H.,Yu, S.,Wang, F.,Sacchettini, J.C.,Magliozzo, R.S. Hydrogen Peroxide-Mediated Isoniazid Activation Catalyzed by Mycobacterium Tuberculosis Catalase- Peroxidase (Katg) and its S315T Mutant. Biochemistry 2006 45 4131 0 2F4J 16424036 Structure of the Kinase Domain of an Imatinib-Resistant Abl Mutant in Complex with the Aurora Kinase Inhibitor VX-680 2005-11-23 2006-01-24 Young, M.A.,Shah, N.P.,Chao, L.H.,Seeliger, M.,Milanov, Z.V.,Biggs, W.H.,Treiber, D.K.,Patel, H.K.,Zarrinkar, P.P.,Lockhart, D.J.,Sawyers, C.L.,Kuriyan, J. Structure of the kinase domain of an imatinib-resistant Abl mutant in complex with the Aurora kinase inhibitor VX-680. Cancer Res. 2006 66 1007 1014 2F4P Crystal structure of a cupin-like protein (tm1010) from thermotoga maritima msb8 at 1.90 A resolution 2005-11-23 2006-01-24 Joint Center for Structural Genomics (JCSG) Crystal structure of hypothetical protein (tm1010) from THERMOTOGA MARITIMA at 1.90 A resolution To be published 0 0 0 0 2FFL 16410517 Crystal Structure of Dicer from Giardia intestinalis 2005-12-19 2006-01-24 MacRae, I.J.,Zhou, K.,Li, F.,Repic, A.,Brooks, A.N.,Cande, W.Z.,Adams, P.D.,Doudna, J.A. Structural Basis of Double-Stranded RNA Processing by Dicer Science 2006 311 195 198 2A07 16407075 Crystal Structure of Foxp2 bound Specifically to DNA. 2005-06-16 2006-01-31 Stroud, J.C.,Wu, Y.,Bates, D.L.,Han, A.,Nowick, K.,Paabo, S.,Tong, H.,Chen, L. Structure of the Forkhead Domain of FOXP2 Bound to DNA. Structure 2006 14 159 166 1ZVV 16316990 Crystal structure of a ccpa-crh-dna complex 2005-06-02 2006-02-07 Schumacher, M.A.,Seidel, G.,Hillen, W.,Brennan, R.G. Phosphoprotein Crh-Ser46-P displays altered binding to CcpA to effect carbon catabolite regulation. J.Biol.Chem. 2006 281 6793 6800 2B2A 16462747 Crystal Structure of the TEN domain of the Telomerase Reverse Transcriptase 2005-09-18 2006-02-07 Jacobs, S.A.,Podell, E.R.,Cech, T.R. Crystal structure of the essential N-terminal domain of telomerase reverse transcriptase. Nat.Struct.Mol.Biol. 2006 13 218 225 2AJV 16472740 Crystal Structure of Cocaine catalytic Antibody 7A1 Fab' in Complex with Cocaine 2005-08-02 2006-02-14 Zhu, X.,Dickerson, T.J.,Rogers, C.J.,Kaufmann, G.F.,Mee, J.M.,McKenzie, K.M.,Janda, K.D.,Wilson, I.A. Complete reaction cycle of a cocaine catalytic antibody at atomic resolution. Structure 2006 14 205 216 2ERJ 16477002 Crystal structure of the heterotrimeric interleukin-2 receptor in complex with interleukin-2 2005-10-25 2006-02-21 Stauber, D.J.,Debler, E.W.,Horton, P.A.,Smith, K.A.,Wilson, I.A. Crystal structure of the IL-2 signaling complex: Paradigm for a heterotrimeric cytokine receptor. Proc.Natl.Acad.Sci.Usa 2006 103 2793 0 2EWN 16438984 Ecoli Biotin Repressor with co-repressor analog 2005-11-04 2006-02-21 Wood, Z.A.,Weaver, L.H.,Brown, P.H.,Beckett, D.,Matthews, B.W. Co-repressor Induced Order and Biotin Repressor Dimerization: A Case for Divergent Followed by Convergent Evolution. J.Mol.Biol. 2006 357 509 523 2B5M 16413485 Crystal Structure of DDB1 2005-09-28 2006-02-28 Li, T.,Chen, X.,Garbutt, K.C.,Zhou, P.,Zheng, N. Structure of DDB1 in complex with a paramyxovirus V protein: viral hijack of a propeller cluster in ubiquitin ligase. Cell(Cambridge,Mass.) 2006 124 105 117 2FV8 The crystal structure of RhoB in the GDP-bound state 2006-01-30 2006-02-28 Turnbull, A.P.,Soundararajan, M.,Smee, C.,Johansson, C.,Schoch, G.,Gorrec, F.,Bray, J.,Papagrigoriou, E.,von Delft, F.,Weigelt, J.,Edwards, A.,Arrowsmith, C.,Sundstrom, M.,Doyle, D. The crystal structure of RhoB in the GDP-bound state To be Published 0 0 0 0 2EV5 16533030 Bacillus subtilis manganese transport regulator (MNTR) bound to calcium 2005-10-31 2006-03-07 Kliegman, J.I.,Griner, S.L.,Helmann, J.D.,Brennan, R.G.,Glasfeld, A. Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis. Biochemistry 2006 45 3493 3505 2EV6 16533030 Bacillus subtilis manganese transport regulator (MNTR) bound to zinc 2005-10-31 2006-03-07 Kliegman, J.I.,Griner, S.L.,Helmann, J.D.,Brennan, R.G.,Glasfeld, A. Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis. Biochemistry 2006 45 3493 3505 2FVG Crystal structure of Endoglucanase (tm1049) from THERMOTOGA MARITIMA at 2.01 A resolution 2006-01-30 2006-03-07 Joint Center for Structural Genomics (JCSG) Crystal structure of Endoglucanase (tm1049) from THERMOTOGA MARITIMA at 2.01 A resolution To be published 0 0 0 0 2G42 Crystal structure of a putative nucleic acid binding protein (tm0693) from thermotoga maritima at 2.28 A resolution 2006-02-21 2006-03-07 Joint Center for Structural Genomics (JCSG) Crystal structure of hypothetical protein (tm0693) from Thermotoga maritima at 2.28 A resolution To be published 0 0 0 0 2CFY Crystal structure of human thioredoxin reductase 1 2006-02-26 2006-03-09 Debreczeni, J.E.,Johansson, C.,Kavanagh, K.,Savitsky, P.,Sundstrom, M.,Arrowsmith, C.,Weigelt, J.,Edwards, A.,von Delft, F.,Oppermann, U. Crystal Structure of Human Thioredoxin Reductase 1 To be Published 0 0 0 0 2F1M 16531241 Conformational flexibility in the multidrug efflux system protein AcrA 2005-11-14 2006-03-21 Mikolosko, J.,Bobyk, K.,Zgurskaya, H.I.,Ghosh, P. Conformational Flexibility in the Multidrug Efflux System Protein AcrA. Structure 2006 14 577 587 2FPQ 16519520 Crystal Structure of Botulinum Neurotoxin Type D Light Chain 2006-01-16 2006-03-21 Arndt, J.W.,Chai, Q.,Christian, T.,Stevens, R.C. Structure of Botulinum Neurotoxin Type D Light Chain at 1.65 A Resolution: Repercussions for VAMP-2 Substrate Specificity(,). Biochemistry 2006 45 3255 3262 2G80 Crystal structure of UTR4 protein (Unknown transcript 4 protein) (yel038w) from Saccharomyces cerevisiae at 2.28 A resolution 2006-03-01 2006-03-28 Joint Center for Structural Genomics (JCSG) Crystal structure of UTR4 protein (Unknown transcript 4 protein) (yel038w) from Saccharomyces cerevisiae at 2.28 A resolution To be published 0 0 0 0 2G3Y Crystal structure of the human small GTPase GEM 2006-02-21 2006-04-18 Ugochukwu, E.,Soundararajan, M.,Elkins, J.,Schoch, G.,Gileadi, C.,Doyle, D. Crystal structure of the human small GTPase GEM To be Published 0 0 0 0 2F2Q 16600969 High resolution crystal structure of T4 lysozyme mutant L20R63/A liganded to guanidinium ion 2005-11-17 2006-04-25 Yousef, M.S.,Bischoff, N.,Dyer, C.M.,Baase, W.A.,Matthews, B.W. Guanidinium derivatives bind preferentially and trigger long-distance conformational changes in an engineered T4 lysozyme. Protein Sci. 2006 15 853 861 2GFP 16675700 Structure of the Multidrug Transporter EmrD from Escherichia coli 2006-03-22 2006-05-16 Yin, Y.,He, X.,Szewczyk, P.,Nguyen, T.,Chang, G. Structure of the multidrug transporter EmrD from Escherichia coli Science 2006 312 741 744 2G2F 16640460 A Src-like Inactive Conformation in the Abl Tyrosine Kinase Domain 2006-02-15 2006-05-23 Levinson, N.M.,Kuchment, O.,Shen, K.,Young, M.A.,Koldobskiy, M.,Karplus, M.,Cole, P.A.,Kuriyan, J. A SRC-like inactive conformation in the abl tyrosine kinase domain. Plos Biol. 2006 4 753 767 2G2I 16640460 A Src-like Inactive Conformation in the Abl Tyrosine Kinase Domain 2006-02-16 2006-05-23 Levinson, N.M.,Kuchment, O.,Shen, K.,Young, M.A.,Koldobskiy, M.,Karplus, M.,Cole, P.A.,Kuriyan, J. A SRC-like inactive conformation in the abl tyrosine kinase domain. Plos Biol. 2006 4 753 767 2GGZ 16626734 Crystal Structure of Human Guanylate Cyclase Activating Protein-3 2006-03-24 2006-05-23 Stephen, R.,Palczewski, K.,Sousa, M.C. The Crystal Structure of GCAP3 Suggests Molecular Mechanism of GCAP-linked Cone Dystrophies. J.Mol.Biol. 2006 359 266 275 2GP3 16677698 Crystal structure of the catalytic core domain of jmjd2a 2006-04-16 2006-05-23 Chen, Z.,Zang, J.,Whetstine, J.,Hong, X.,Davrazou, F.,Kutateladze, T.G.,Simpson, M.,Mao, Q.,Pan, C.H.,Dai, S.,Hagman, J.,Hansen, K.,Shi, Y.,Zhang, G. Structural insights into histone demethylation by JMJD2 family members Cell(Cambridge,Mass.) 2006 125 691 702 2GP5 16677698 Crystal structure of catalytic core domain of jmjd2A complexed with alpha-Ketoglutarate 2006-04-16 2006-05-23 Chen, Z.,Zang, J.,Whetstine, J.,Hong, X.,Davrazou, F.,Kutateladze, T.G.,Simpson, M.,Mao, Q.,Pan, C.H.,Dai, S.,Hagman, J.,Hansen, K.,Shi, Y.,Zhang, G. Structural insights into histone demethylation by JMJD2 family members Cell(Cambridge,Mass.) 2006 125 691 702 2H2P 16905147 Crystal structure of CLC-ec1 in complex with Fab fragment in SeCN- 2006-05-19 2006-05-30 Nguitragool, W.,Miller, C. Uncoupling of a CLC Cl(-)/H(+) Exchange Transporter by Polyatomic Anions J.Mol.Biol. 2006 362 682 690 2GWF 17035239 Structure of a USP8-NRDP1 complex 2006-05-04 2006-06-06 Avvakumov, G.V.,Walker, J.R.,Xue, S.,Finerty Jr., P.J.,Mackenzie, F.,Newman, E.M.,Dhe-Paganon, S. Amino-terminal Dimerization, NRDP1-Rhodanese Interaction, and Inhibited Catalytic Domain Conformation of the Ubiquitin-specific Protease 8 (USP8). J.Biol.Chem. 2006 281 38061 38070 2GH0 16765900 Growth factor/receptor complex 2006-03-24 2006-06-27 Wang, X.,Baloh, R.H.,Milbrandt, J.,Garcia, K.C. Structure of Artemin Complexed with Its Receptor GFRalpha3: Convergent Recognition of Glial Cell Line-Derived Neurotrophic Factors. Structure 2006 14 1083 1092 2EUF 16789739 X-ray structure of human CDK6-Vcyclin in complex with the inhibitor PD0332991 2005-10-28 2006-07-04 Lu, H.,Schulze-Gahmen, U. Toward understanding the structural basis of cyclin-dependent kinase 6 specific inhibition. J.Med.Chem. 2006 49 3826 3831 2GIS 16810258 Structure of the S-adenosylmethionine riboswitch mRNA regulatory element 2006-03-29 2006-07-04 Montange, R.K.,Batey, R.T. Structure of the S-adenosylmethionine riboswitch regulatory mRNA element. Nature 2006 441 1172 1175 2GVD 16766715 Complex Of Gs- With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With TNP-ATP and Mn 2006-05-02 2006-07-04 Mou, T.-C.,Gille, A.,Suryanarayana, S.,Richter, M.,Seifert, R.,Sprang, S.R. Broad specificity of Mammalian adenylyl cyclase for interaction with 2',3'-substituted purine- and pyrimidine nucleotide inhibitors. Mol.Pharmacol. 2006 70 878 886 2GVZ 16766715 Crystal Structure of Complex of Gs- with The Catalytic Domains of Mammalian Adenylyl Cyclase: Complex with MANT-ATP and Mn 2006-05-03 2006-07-04 Mou, T.-C.,Gille, A.,Suryanarayana, S.,Richter, M.,Seifert, R.,Sprang, S.R. Broad specificity of Mammalian adenylyl cyclase for interaction with 2',3'-substituted purine- and pyrimidine nucleotide inhibitors. Mol.Pharmacol. 2006 70 878 886 2H94 16799558 Crystal Structure and Mechanism of human Lysine-Specific Demethylase-1 2006-06-08 2006-07-04 Stavropoulos, P.,Blobel, G.,Hoelz, A. Crystal structure and mechanism of human lysine-specific demethylase-1. Nat.Struct.Mol.Biol. 2006 13 626 632 2HEK 17565173 Crystal structure of O67745, a hypothetical protein from Aquifex aeolicus at 2.0 A resolution. 2006-06-21 2006-07-04 Oganesyan, V.,Adams, P.D.,Jancarik, J.,Kim, R.,Kim, S.H. Structure of O67745_AQUAE, a hypothetical protein from Aquifex aeolicus. Acta Crystallogr.,Sect.F 2007 63 369 374 2H2W Crystal structure of Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine O-transsuccinylase) (HTS) (tm0881) from THERMOTOGA MARITIMA at 2.52 A resolution 2006-05-19 2006-07-18 Joint Center for Structural Genomics (JCSG) Crystal structure of Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine O-transsuccinylase) (HTS) (tm0881) from THERMOTOGA MARITIMA at 2.52 A resolution To be published 0 0 0 0 2GIX 16834334 Cytoplasmic Domain Structure of Kir2.1 containing Andersen's Mutation R218Q and Rescue Mutation T309K 2006-03-29 2006-07-25 Pegan, S.,Arrabit, C.,Slesinger, P.A.,Choe, S. Andersen's Syndrome Mutation Effects on the Structure and Assembly of the Cytoplasmic Domains of Kir2.1. Biochemistry 2006 45 8599 8606 2GSN 16893180 Structure of Xac Nucleotide Pyrophosphatase/Phosphodiesterase 2006-04-26 2006-08-01 Zalatan, J.G.,Fenn, T.D.,Brunger, A.T.,Herschlag, D. Structural and functional comparisons of nucleotide pyrophosphatase/phosphodiesterase and alkaline phosphatase: implications for mechanism and evolution Biochemistry 2006 45 9788 9803 2AS5 16873067 Structure of the DNA binding domains of NFAT and FOXP2 bound specifically to DNA. 2005-08-22 2006-08-08 Wu, Y.,Borde, M.,Heissmeyer, V.,Feuerer, M.,Lapan, A.D.,Stroud, J.C.,Bates, D.L.,Guo, L.,Han, A.,Ziegler, S.F.,Mathis, D.,Benoist, C.,Chen, L.,Rao, A. FOXP3 Controls Regulatory T Cell Function through Cooperation with NFAT. Cell(Cambridge,Mass.) 2006 126 375 387 2FYG 16873246 Crystal structure of NSP10 from Sars coronavirus 2006-02-07 2006-08-08 Joseph, J.S.,Saikatendu, K.S.,Subramanian, V.,Neuman, B.W.,Brooun, A.,Griffith, M.,Moy, K.,Yadav, M.K.,Velasquez, J.,Buchmeier, M.J.,Stevens, R.C.,Kuhn, P. Crystal structure of nonstructural protein 10 from the severe acute respiratory syndrome coronavirus reveals a novel fold with two zinc-binding motifs. J.Virol. 2006 80 7894 7901 2G66 16798737 Crystal structure of a collagen-like peptide with 3(S)Hyp in the Xaa position 2006-02-24 2006-08-08 Schumacher, M.A.,Mizuno, K.,Bachinger, H.P. The Crystal Structure of a Collagen-like Polypeptide with 3(S)-Hydroxyproline Residues in the Xaa Position Forms a Standard 7/2 Collagen Triple Helix J.Biol.Chem. 2006 281 27566 27574 2H9G 16859704 Crystal structure of phage derived Fab BdF1 with human Death Receptor 5 (DR5) 2006-06-09 2006-08-08 Li, B.,Russell, S.J.,Compaan, D.M.,Totpal, K.,Marsters, S.A.,Ashkenazi, A.,Cochran, A.G.,Hymowitz, S.G.,Sidhu, S.S. Activation of the Proapoptotic Death Receptor DR5 by Oligomeric Peptide and Antibody Agonists. J.Mol.Biol. 2006 361 522 536 2GQ3 16877713 mycobacterium tuberculosis malate synthase in complex with magnesium, malate, and coenzyme A 2006-04-19 2006-08-15 Anstrom, D.M.,Remington, S.J. The product complex of M. tuberculosis malate synthase revisited. Protein Sci. 2006 15 2002 2007 2H7F 16885024 Structure of variola topoisomerase covalently bound to DNA 2006-06-02 2006-08-15 Perry, K.,Hwang, Y.,Bushman, F.D.,Van Duyne, G.D. Structural basis for specificity in the poxvirus topoisomerase. Mol.Cell 2006 23 343 354 2H7F 16885024 Structure of variola topoisomerase covalently bound to DNA 2006-06-02 2006-08-15 Perry, K.,Hwang, Y.,Bushman, F.D.,Van Duyne, G.D. Structural basis for specificity in the poxvirus topoisomerase. Mol.Cell 2006 23 343 354 2BSQ 16982615 FitAB bound to DNA 2005-05-23 2006-08-24 Mattison, K.,Wilbur, J.S.,So, M.,Brennan, R.G. Structure of Fitab from Neisseria Gonorrhoeae Bound to DNA Reveals a Tetramer of Toxin-Antitoxin Heterodimers Containing Pin Domains and Ribbon-Helix-Helix Motifs. J.Biol.Chem. 2006 281 37942 0 2GIA 16923390 Crystal structures of trypanosoma bruciei MRP1/MRP2 2006-03-28 2006-09-05 Schumacher, M.A.,Karamooz, E.,Zikova, A.,Trantirek, L.,Lukes, J. Crystal Structures of T. brucei MRP1/MRP2 Guide-RNA Binding Complex Reveal RNA Matchmaking Mechanism. Cell(Cambridge,Mass.) 2006 126 701 711 2GID 16923390 Crystal structures of trypanosoma bruciei MRP1/MRP2 2006-03-28 2006-09-05 Schumacher, M.A.,Karamooz, E.,Zikova, A.,Trantirek, L.,Lukes, J. Crystal Structures of T. brucei MRP1/MRP2 Guide-RNA Binding Complex Reveal RNA Matchmaking Mechanism. Cell(Cambridge,Mass.) 2006 126 701 711 2GZR 16922493 Enterobactin and Salmochelin Hydrolase IroE 2006-05-11 2006-09-05 Larsen, N.A.,Lin, H.,Wei, R.,Fischbach, M.A.,Walsh, C.T. Structural Characterization of Enterobactin Hydrolase IroE. Biochemistry 2006 45 10184 10190 2GZS 16922493 Enterobactin Hydolase IroE Complex with DFP 2006-05-12 2006-09-05 Larsen, N.A.,Lin, H.,Wei, R.,Fischbach, M.A.,Walsh, C.T. Structural Characterization of Enterobactin Hydrolase IroE. Biochemistry 2006 45 10184 10190 2HPM 16959569 Eubacterial and Eukaryotic Replicative DNA Polymerases are not Homologous: X-ray Structure of DNA Polymerase III 2006-07-17 2006-09-19 Bailey, S.,Wing, R.A.,Steitz, T.A. The Structure of T. aquaticus DNA Polymerase III Is Distinct from Eukaryotic Replicative DNA Polymerases. Cell(Cambridge,Mass.) 2006 126 893 904 2HT2 16949616 Structure of the Escherichia coli ClC chloride channel Y445H mutant and Fab complex 2006-07-25 2006-09-19 Accardi, A.,Lobet, S.,Williams, C.,Miller, C.,Dutzler, R. Synergism Between Halide Binding and Proton Transport in a CLC-type Exchanger. J.Mol.Biol. 2006 362 691 699 2HT3 16949616 Structure of the Escherichia coli ClC chloride channel Y445L mutant and Fab complex 2006-07-25 2006-09-19 Accardi, A.,Lobet, S.,Williams, C.,Miller, C.,Dutzler, R. Synergism between halide binding and proton transport in a CLC-type exchanger J.Mol.Biol. 2006 362 691 699 2HT4 16949616 Structure of the Escherichia coli ClC chloride channel Y445W mutant and Fab complex 2006-07-25 2006-09-19 Accardi, A.,Lobet, S.,Williams, C.,Miller, C.,Dutzler, R. Synergism Between Halide Binding and Proton Transport in a CLC-type Exchanger. J.Mol.Biol. 2006 362 691 699 2HTK 16949616 Structure of the Escherichia coli ClC chloride channel Y445A mutant and Fab complex 2006-07-26 2006-09-19 Accardi, A.,Lobet, S.,Williams, C.,Miller, C.,Dutzler, R. Synergism between halide binding and proton transport in a CLC-type exchanger J.Mol.Biol. 2006 362 691 699 2GAZ 16982895 Mycobacterial lipoglycan presentation by CD1d 2006-03-09 2006-09-26 Zajonc, D.M.,Ainge, G.D.,Painter, G.F.,Severn, W.B.,Wilson, I.A. Structural characterization of mycobacterial phosphatidylinositol mannoside binding to mouse CD1d. J.Immunol. 2006 177 4577 4583 2H1C 16982615 Crystal Structure of FitAcB from Neisseria gonorrhoeae 2006-05-16 2006-09-26 Mattison, K.,Wilbur, J.S.,So, M.,Brennan, R.G. Structure of FitAB from Neisseria gonorrhoeae bound to DNA reveals a tetramer of toxin-antitoxin heterodimers containing pin domains and ribbon-helix-helix motifs. J.Biol.Chem. 2006 281 37942 37951 2H1C 16982615 Crystal Structure of FitAcB from Neisseria gonorrhoeae 2006-05-16 2006-09-26 Mattison, K.,Wilbur, J.S.,So, M.,Brennan, R.G. Structure of FitAB from Neisseria gonorrhoeae bound to DNA reveals a tetramer of toxin-antitoxin heterodimers containing pin domains and ribbon-helix-helix motifs. J.Biol.Chem. 2006 281 37942 37951 2H1O 16982615 Structure of FitAB bound to IR36 DNA fragment 2006-05-16 2006-09-26 Mattison, K.,Wilbur, J.S.,So, M.,Brennan, R.G. Structure of FitAB from Neisseria gonorrhoeae bound to DNA reveals a tetramer of toxin-antitoxin heterodimers containing pin domains and ribbon-helix-helix motifs. J.Biol.Chem. 2006 281 37942 37951 2I9P Crystal structure of human hydroxyisobutyrate dehydrogenase complexed with NAD+ 2006-09-06 2006-09-26 Kavanagh, K.L.,Papagrigoriou, E.,Salah, E.,Lukacik, P.,Smee, C.,Burgess, N.,von Delft, F.,Weigelt, J.,Arrowsmith, C.,Sundstrom, M.,Edwards, A.,Oppermann, U. Crystal structure of human hydroxyisobutyrate dehydrogenase complexed with NAD+ To be Published 0 0 0 0 2J3H 17028190 Crystal structure of Arabidopsis thaliana Double Bond Reductase (AT5G16970)-Apo form 2006-08-21 2006-10-05 Youn, B.,Kim, S.J.,Moinuddin, S.G.,Lee, C.,Bedgar, D.L.,Harper, A.R.,Davin, L.B.,Lewis, N.G.,Kang, C. Mechanistic and Structural Studies of Apoform, Binary, and Ternary Complexes of the Arabidopsis Alkenal Double Bond Reductase at5G16970. J.Biol.Chem. 2006 281 40076 0 2J3K 17028190 Crystal structure of Arabidopsis thaliana Double Bond Reductase (AT5G16970)-Ternary Complex II 2006-08-22 2006-10-05 Youn, B.,Kim, S.J.,Moinuddin, S.G.,Lee, C.,Bedgar, D.L.,Harper, A.R.,Davin, L.B.,Lewis, N.G.,Kang, C. Mechanistic and structural studies of apoform, binary, and ternary complexes of the Arabidopsis alkenal double bond reductase At5g16970. J. Biol. Chem. 2006 281 40076 40088 2IUJ 17022084 Crystal Structure of Soybean Lipoxygenase-B 2006-06-05 2006-10-11 Youn, B.,Sellhorn, G.E.,Mirchel, R.J.,Gaffney, B.J.,Grimes, H.D.,Kang, C. Crystal Structures of Vegetative Soybean Lipoxygenase Vlx-B and Vlx-D, and Comparisons with Seed Isoforms Lox-1 and Lox-3. Proteins 2006 65 1008 0 2GQ0 17055434 Crystal Structure of the Middle Domain of HtpG, the E. coli Hsp90 2006-04-19 2006-10-31 Shiau, A.K.,Harris, S.F.,Southworth, D.R.,Agard, D.A. Structural Analysis of E. coli hsp90 reveals dramatic nucleotide-dependent conformational rearrangements. Cell(Cambridge,Mass.) 2006 127 329 340 2IJE 17075039 Crystal Structure of the Cdc25 domain of RasGRF1 2006-09-29 2006-10-31 Freedman, T.S.,Sondermann, H.,Friedland, G.D.,Kortemme, T.,Bar-Sagi, D.,Marqusee, S.,Kuriyan, J. A Ras-induced conformational switch in the Ras activator Son of sevenless. Proc.Natl.Acad.Sci.Usa 2006 103 16692 16697 2HYF 17118401 The Structure of apo-MntR from Bacillus subtilis, selenomethionine derivative 2006-08-06 2006-11-07 DeWitt, M.A.,Kliegman, J.I.,Helmann, J.D.,Brennan, R.G.,Farrens, D.L.,Glasfeld, A. The conformations of the manganese transport regulator of Bacillus subtilis in its metal-free state. J.Mol.Biol. 2007 365 1257 1265 2ISG 17092934 Botulinum Neurotoxin A Light Chain WT Crystal Form B 2006-10-17 2006-11-07 Burnett, J.C.,Ruthel, G.,Stegmann, C.M.,Panchal, R.G.,Nguyen, T.L.,Hermone, A.R.,Stafford, R.G.,Lane, D.J.,Kenny, T.A.,McGrath, C.F.,Wipf, P.,Stahl, A.M.,Schmidt, J.J.,Gussio, R.,Brunger, A.T.,Bavari, S. Inhibition of metalloprotease botulinum serotype A from a pseudo-peptide binding mode to a small molecule that is active in primary neurons. J.Biol.Chem. 2007 282 5004 5014 2ISH 17092934 Botulinum Neurotoxin A Light Chain WT Crystal Form C 2006-10-17 2006-11-07 Burnett, J.C.,Ruthel, G.,Stegmann, C.M.,Panchal, R.G.,Nguyen, T.L.,Hermone, A.R.,Stafford, R.G.,Lane, D.J.,Kenny, T.A.,McGrath, C.F.,Wipf, P.,Stahl, A.M.,Schmidt, J.J.,Gussio, R.,Brunger, A.T.,Bavari, S. Inhibition of metalloprotease botulinum serotype A from a pseudo-peptide binding mode to a small molecule that is active in primary neurons. J.Biol.Chem. 2007 282 5004 5014 2B1I 17324932 crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase 2005-09-15 2006-11-21 Xu, L.,Chong, Y.,Hwang, I.,D'Onofrio, A.,Amore, K.,Beardsley, G.P.,Li, C.,Olson, A.J.,Boger, D.L.,Wilson, I.A. Structure-based Design, Synthesis, Evaluation, and Crystal Structures of Transition State Analogue Inhibitors of Inosine Monophosphate Cyclohydrolase. J.Biol.Chem. 2007 282 13033 13046 2I82 17188032 Crystal structure of pseudouridine synthase RluA: indirect sequence readout through protein-induced RNA structure 2006-08-31 2006-11-21 Hoang, C.,Chen, J.,Vizthum, C.A.,Kandel, J.M.,Hamilton, C.S.,Mueller, E.G.,Ferre-D'Amare, A.R. Crystal structure of pseudouridine synthase RluA: indirect sequence readout through protein-induced RNA structure Mol.Cell 2006 24 535 545 2ISB Crystal structure of Fumarase of FUM-1 (NP_069927.1) from Archaeoglobus Fulgidus at 1.66 A resolution 2006-10-17 2006-11-28 Joint Center for Structural Genomics (JCSG) Crystal structure of Fumarase of FUM-1 (NP_069927.1) from Archaeoglobus Fulgidus at 1.66 A resolution To be published 0 0 0 0 2FX8 17125793 Crystal structure of hiv-1 neutralizing human fab 4e10 in complex with an aib-induced peptide encompassing the 4e10 epitope on gp41 2006-02-03 2006-12-19 Cardoso, R.M.,Brunel, F.M.,Ferguson, S.,Zwick, M.,Burton, D.R.,Dawson, P.E.,Wilson, I.A. Structural basis of enhanced binding of extended and helically constrained peptide epitopes of the broadly neutralizing HIV-1 antibody 4E10. J.Mol.Biol. 2007 365 1533 1544 2IGP 17195848 Crystal Structure of Hec1 CH domain 2006-09-22 2007-01-02 Wei, R.R.,Al-Bassam, J.,Harrison, S.C. The Ndc80/HEC1 complex is a contact point for kinetochore-microtubule attachment. Nat.Struct.Mol.Biol. 2007 14 54 59 2NYT 17187054 The APOBEC2 Crystal Structure and Functional Implications for AID 2006-11-21 2007-01-09 Prochnow, C.,Bransteitter, R.,Klein, M.G.,Goodman, M.F.,Chen, X.S. The APOBEC-2 crystal structure and functional implications for the deaminase AID. Nature 2007 445 447 451 2OIT 17264208 Crystal Structure of the N-terminal Domain of the Human Proto-oncogene Nup214/CAN 2007-01-11 2007-02-06 Napetschnig, J.,Blobel, G.,Hoelz, A. Crystal structure of the N-terminal domain of the human protooncogene Nup214/CAN. Proc.Natl.Acad.Sci.Usa 2007 104 1783 1788 2IL9 17124290 Crystal Structure of Plautia Stali Intestine Virus Intergenic Region Internal Ribosome Entry Site Ribosomal Binding Domain RNA at 3.1 Angstroms 2006-10-02 2007-02-13 Pfingsten, J.S.,Costantino, D.A.,Kieft, J.S. Structural basis for ribosome recruitment and manipulation by a viral IRES RNA Science 2006 314 1450 1454 2CF5 16633561 Crystal Structures of the Arabidopsis Cinnamyl Alcohol Dehydrogenases, AtCAD5 2006-02-16 2007-02-20 Youn, B.,Camacho, R.,Moinuddin, S.,Lee, C.,Davin, L.B.,Lewis, N.G.,Kang, C. Crystal Structures and Catalytic Mechanisms of the Arabidopsis Cinnamyl Alcohol Dehydrogenases Atcad5 and Atcad4 Org.Biomol.Chem. 2006 4 1687 0 2NTZ 17293348 Structure of a ParB-DNA complex reveals a double B-box interaction 2006-11-08 2007-02-20 Schumacher, M.A.,Mansoor, A.,Funnell, B.E. Structure of a four-way bridged ParB-DNA complex provides insight into P1 segrosome assembly. J.Biol.Chem. 2007 282 10456 10464 2HWP 17334377 Crystal structure of Src kinase domain in complex with covalent inhibitor PD168393 2006-08-01 2007-02-27 Blair, J.A.,Rauh, D.,Kung, C.,Yun, C.H.,Fan, Q.W.,Rode, H.,Zhang, C.,Eck, M.J.,Weiss, W.A.,Shokat, K.M. Structure-guided development of affinity probes for tyrosine kinases using chemical genetics. Nat.Chem.Biol. 2007 3 229 238 2O94 17360518 The 97H/F mutant Structure of a glutamine-rich domain from histone deacetylase 4 2006-12-13 2007-02-27 Guo, L.,Han, A.,Bates, D.L.,Cao, J.,Chen, L. Crystal structure of a conserved N-terminal domain of histone deacetylase 4 reveals functional insights into glutamine-rich domains. Proc.Natl.Acad.Sci.Usa 2007 104 4297 4302 2I24 17258766 Crystal structure analysis of the nurse shark New Antigen Receptor PBLA8 variable domain 2006-08-15 2007-03-06 Stanfield, R.L.,Dooley, H.,Verdino, P.,Flajnik, M.F.,Wilson, I.A. Maturation of Shark Single-domain (IgNAR) Antibodies: Evidence for Induced-fit Binding J.Mol.Biol. 2007 367 358 372 2I26 17258766 Crystal structure analysis of the nurse shark new antigen receptor ancestral variable domain in complex with lysozyme 2006-08-15 2007-03-06 Stanfield, R.L.,Dooley, H.,Verdino, P.,Flajnik, M.F.,Wilson, I.A. Maturation of Shark Single-domain (IgNAR) Antibodies: Evidence for Induced-fit Binding. J.Mol.Biol. 2007 367 358 372 2ONG 17372193 Crystal Structure of of limonene synthase with 2-fluorogeranyl diphosphate (FGPP). 2007-01-23 2007-03-06 Hyatt, D.C.,Youn, B.,Zhao, Y.,Santhamma, B.,Coates, R.M.,Croteau, R.B.,Kang, C. Structure of limonene synthase, a simple model for terpenoid cyclase catalysis. Proc.Natl.Acad.Sci.Usa 2007 104 5360 5365 2ONH 17372193 Crystal Structure of of limonene synthase with 2-fluorolinalyl diphosphate(FLPP) 2007-01-24 2007-03-06 Hyatt, D.C.,Youn, B.,Zhao, Y.,Santhamma, B.,Coates, R.M.,Croteau, R.B.,Kang, C. Structure of limonene synthase, a simple model for terpenoid cyclase catalysis. Proc.Natl.Acad.Sci.Usa 2007 104 5360 5365 2IPM Crystal structure of a disulfide mutant glucose binding protein 2006-10-12 2007-03-20 Cuneo, M.J.,Hellinga, H.W. The free energy cost of domain reorganization in E. coli glucose binding protein To be Published 0 0 0 0 2IPN Crystal structure of a disulfide mutant glucose binding protein 2006-10-12 2007-03-20 Cuneo, M.J.,Hellinga, H.W. The free energy cost of domain reorganization in E. coli glucose binding protein To be Published 0 0 0 0 2OIQ 17355866 Crystal Structure of chicken c-Src kinase domain in complex with the cancer drug imatinib. 2007-01-11 2007-03-20 Seeliger, M.A.,Nagar, B.,Frank, F.,Cao, X.,Henderson, M.N.,Kuriyan, J. c-Src Binds to the Cancer Drug Imatinib with an Inactive Abl/c-Kit Conformation and a Distributed Thermodynamic Penalty. Structure 2007 15 299 311 2H0R 17382284 Structure of the Yeast Nicotinamidase Pnc1p 2006-05-15 2007-03-27 Hu, G.,Taylor, A.B.,McAlister-Henn, L.,Hart, P.J. Crystal structure of the yeast nicotinamidase Pnc1p. Arch.Biochem.Biophys. 2007 461 66 75 2H0R 17382284 Structure of the Yeast Nicotinamidase Pnc1p 2006-05-15 2007-03-27 Hu, G.,Taylor, A.B.,McAlister-Henn, L.,Hart, P.J. Crystal structure of the yeast nicotinamidase Pnc1p. Arch.Biochem.Biophys. 2007 461 66 75 2OIH 17355864 Hepatitis Delta Virus gemonic ribozyme precursor with C75U mutation and bound to monovalent cation Tl+ 2007-01-11 2007-03-27 Ke, A.,Ding, F.,Batchelor, J.D.,Doudna, J.A. Structural roles of monovalent cations in the HDV ribozyme. Structure 2007 15 281 287 2OJ3 17355864 Hepatitis Delta Virus ribozyme precursor structure, with C75U mutation, bound to Tl+ and cobalt hexammine (Co(NH3)63+) 2007-01-12 2007-03-27 Ke, A.,Ding, F.,Batchelor, J.D.,Doudna, J.A. Structural roles of monovalent cations in the HDV ribozyme. Structure 2007 15 281 287 2OAJ 17392788 Crystal structure of Sro7 from S. cerevisiae 2006-12-15 2007-04-03 Hattendorf, D.A.,Andreeva, A.,Gangar, A.,Brennwald, P.J.,Weis, W.I. Structure of the yeast polarity protein Sro7 reveals a SNARE regulatory mechanism. Nature 2007 446 567 571 2OX8 17420244 Human Scavenger Receptor C-type Lectin carbohydrate-recognition domain. 2007-02-20 2007-04-03 Feinberg, H.,Taylor, M.E.,Weis, W.I. Scavenger receptor C-type lectin binds to the leukocyte cell surface glycan Lewis(x) by a novel mechanism. J.Biol.Chem. 2007 282 17250 17258 2P1M 17410169 TIR1-ASK1 complex structure 2007-03-05 2007-04-10 Tan, X.,Calderon-Villalobos, L.I.A.,Sharon, M.,Zheng, C.,Robinson, C.V.,Estelle, M.,Zheng, N. Mechanism of auxin perception by the TIR1 ubiquitin ligase Nature 2007 446 640 645 2P1O 17410169 Mechanism of Auxin Perception by the TIR1 ubiquitin ligase 2007-03-06 2007-04-10 Tan, X.,Calderon-Villalobos, L.I.A.,Sharon, M.,Zheng, C.,Robinson, C.V.,Estelle, M.,Zheng, N. Mechanism of auxin perception by the TIR1 ubiquitin ligase Nature 2007 446 640 645 2P1Q 17410169 Mechanism of Auxin Perception by the TIR1 ubiquitin ligase 2007-03-06 2007-04-10 Tan, X.,Calderon-Villalobos, L.I.,Sharon, M.,Zheng, C.,Robinson, C.V.,Estelle, M.,Zheng, N. Mechanism of auxin perception by the TIR1 ubiquitin ligase. Nature 2007 446 640 645 2NZU 17376479 Structural mechanism for the fine-tuning of CcpA function by the small molecule effectors G6P and FBP 2006-11-25 2007-05-01 Schumacher, M.A.,Seidel, G.,Hillen, W.,Brennan, R.G. Structural Mechanism for the Fine-tuning of CcpA Function by The Small Molecule Effectors Glucose 6-Phosphate and Fructose 1,6-Bisphosphate. J.Mol.Biol. 2007 368 1042 1050 2NZV 17376479 Structural mechanism for the fine-tuning of CcpA function by the small molecule effectors G6P and FBP 2006-11-25 2007-05-01 Schumacher, M.A.,Seidel, G.,Hillen, W.,Brennan, R.G. Structural Mechanism for the Fine-tuning of CcpA Function by The Small Molecule Effectors Glucose 6-Phosphate and Fructose 1,6-Bisphosphate. J.Mol.Biol. 2007 368 1042 1050 2OEN 17376479 Structural mechanism for the fine-tuning of CcpA function by the small molecule effectors glucose-6-phosphate and fructose-1,6-bisphosphate 2006-12-30 2007-05-01 Schumacher, M.A.,Seidel, G.,Hillen, W.,Brennan, R.G. Structural Mechanism for the Fine-tuning of CcpA Function by The Small Molecule Effectors Glucose 6-Phosphate and Fructose 1,6-Bisphosphate. J.Mol.Biol. 2007 368 1042 1050 2H3N 17431183 Crystal structure of a surrogate light chain (LAMBDA5 and VpreB) homodimer 2006-05-22 2007-05-08 Bankovich, A.J.,Raunser, S.,Juo, Z.S.,Walz, T.,Davis, M.M.,Garcia, K.C. Structural insight into pre-B cell receptor function Science 2007 316 291 294 2HG2 17173928 Structure of Lactaldehyde Dehydrogenase 2006-06-26 2007-05-08 Di Costanzo, L.,Gomez, G.A.,Christianson, D.W. Crystal structure of lactaldehyde dehydrogenase from Escherichia coli and inferences regarding substrate and cofactor specificity J.Mol.Biol. 2007 366 481 493 2NYK 17537914 Crystal structure of m157 from mouse cytomegalovirus 2006-11-20 2007-05-29 Adams, E.J.,Juo, Z.S.,Venook, R.T.,Boulanger, M.J.,Arase, H.,Lanier, L.L.,Garcia, K.C. Structural elucidation of the m157 mouse cytomegalovirus ligand for Ly49 natural killer cell receptors. Proc.Natl.Acad.Sci.Usa 2007 104 10128 10133 2PWN Crystal structure of BET3 homolog (13277653) from Mus musculus at 2.04 A resolution 2007-05-11 2007-05-29 Joint Center for Structural Genomics (JCSG) Crystal structure of BET3 homolog (13277653) from Mus musculus at 2.04 A resolution To be published 0 0 0 0 2Q0A 17562314 Structure and rearrangements in the carboxy-terminal region of SpIH channels 2007-05-21 2007-06-19 Flynn, G.E.,Black, K.D.,Islas, L.D.,Sankaran, B.,Zagotta, W.N. Structure and rearrangements in the carboxy-terminal region of SpIH channels. Structure 2007 15 671 682 2HOF 17573343 Crystal structure of the pre-cleavage synaptic complex in the cre-loxp site-specific recombination 2006-07-14 2007-06-26 Ghosh, K.,Guo, F.,Van Duyne, G.D. Synapsis of loxP sites by Cre recombinase. J.Biol.Chem. 2007 282 24004 24016 2HOI 17573343 Crystal structure of the tetrameric pre-cleavage synaptic complex in the cre-loxp site-specific recombination 2006-07-14 2007-06-26 Ghosh, K.,Guo, F.,Van Duyne, G.D. Synapsis of loxP sites by Cre recombinase. J.Biol.Chem. 2007 282 24004 24016 2PGZ 17481657 Crystal structure of Cocaine bound to an ACh-Binding Protein 2007-04-10 2007-07-03 Hansen, S.B.,Taylor, P. Galanthamine and non-competitive inhibitor binding to ACh-binding protein: evidence for a binding site on non-alpha-subunit interfaces of heteromeric neuronal nicotinic receptors. J.Mol.Biol. 2007 369 895 901 2PH9 17481657 Galanthamine bound to an ACh-binding Protein 2007-04-10 2007-07-03 Hansen, S.B.,Taylor, P. Galanthamine and non-competitive inhibitor binding to ACh-binding protein: evidence for a binding site on non-alpha-subunit interfaces of heteromeric neuronal nicotinic receptors. J.Mol.Biol. 2007 369 895 901 2P2V 17518445 Crystal structure analysis of monofunctional alpha-2,3-sialyltransferase Cst-I from Campylobacter jejuni 2007-03-07 2007-07-10 Chiu, C.P.,Lairson, L.L.,Gilbert, M.,Wakarchuk, W.W.,Withers, S.G.,Strynadka, N.C. Structural Analysis of the alpha-2,3-Sialyltransferase Cst-I from Campylobacter jejuni in Apo and Substrate-Analogue Bound Forms. Biochemistry 2007 46 7196 7204 2PUO 17611542 Crystal srtucture of the NEM modified ferredoxin:thioredoxin reductase 2007-05-09 2007-07-10 Dai, S.,Friemann, R.,Glauser, D.A.,Bourquin, F.,Manieri, W.,Schurmann, P.,Eklund, H. Structural snapshots along the reaction pathway of ferredoxin-thioredoxin reductase. Nature 2007 448 92 96 2PVO 17611542 Crystal srtucture of the ternary complex between thioredoxin f, ferredoxin, and ferredoxin: thioredoxin reductase 2007-05-09 2007-07-10 Dai, S.,Friemann, R.,Glauser, D.A.,Bourquin, F.,Manieri, W.,Schurmann, P.,Eklund, H. Structural snapshots along the reaction pathway of ferredoxin-thioredoxin reductase. Nature 2007 448 92 96 2DTZ 17567017 Crystal Structure of multidrug binding protein QacR from Staphylococcus aureus cocrystallized with compound DB75 2006-07-19 2007-07-17 Brooks, B.E.,Piro, K.M.,Brennan, R.G. Multidrug-Binding Transcription Factor QacR Binds the Bivalent Aromatic Diamidines DB75 and DB359 in Multiple Positions J.Am.Chem.Soc. 2007 129 8389 8395 2HLO Crystal Structure of Fragment D-dimer from Human Fibrin Complexed with Gly-hydroxyPro-Arg-Pro-amide 2006-07-08 2007-07-17 0 0 0 0 2HQ5 17567017 Crystal structure of multidrug binding protein QacR from Staphylococcus aureus cocrystallized with compound DB359 2006-07-18 2007-07-17 Brooks, B.E.,Piro, K.M.,Brennan, R.G. Multidrug-Binding Transcription Factor QacR Binds the Bivalent Aromatic Diamidines DB75 and DB359 in Multiple Positions J.Am.Chem.Soc. 2007 129 8389 8395 2O61 17574024 Crystal Structure of NFkB, IRF7, IRF3 bound to the interferon-b enhancer 2006-12-06 2007-07-24 Panne, D.,Maniatis, T.,Harrison, S.C. An Atomic Model of the Interferon-beta Enhanceosome. Cell(Cambridge,Mass.) 2007 129 1111 1123 2QC1 17643119 Crystal structure of the extracellular domain of the nicotinic acetylcholine receptor 1 subunit bound to alpha-bungarotoxin at 1.9 A resolution 2007-06-18 2007-08-07 Dellisanti, C.D.,Yao, Y.,Stroud, J.C.,Wang, Z.Z.,Chen, L. Crystal structure of the extracellular domain of nAChR alpha1 bound to alpha-bungarotoxin at 1.94 A resolution. Nat.Neurosci. 2007 10 953 962 2Q8R 17691823 Structural and Functional Characterization of CC Chemokine CCL14 2007-06-11 2007-09-11 Blain, K.Y.,Kwiatkowski, W.,Zhao, Q.,La Fleur, D.,Naik, C.,Chun, T.-W.,Tsareva, T.,Kanakaraj, P.,Laird, M.W.,Shah, R.,George, L.,Sanyal, I.,Moore, P.A.,Demeler, B.,Choe, S. Structural and Functional Characterization of CC Chemokine CCL14 Biochemistry 2007 46 10008 10015 2VAF 17881003 Crystal structure of Human Cardiac Calsequestrin 2007-08-31 2007-09-11 Kim, E.,Youn, B.,Kemper, L.,Campbell, C.,Milting, H.,Varsanyi, M.,Kang, C. Characterization of Human Cardiac Calsequestrin and its Deleterious Mutants. J.Mol.Biol. 2007 373 1047 0 2RFR Crystal structure of an ntf2-like protein with a cystatin-like fold (saro_3722) from novosphingobium aromaticivorans dsm at 1.16 A resolution 2007-10-01 2007-10-16 Joint Center for Structural Genomics (JCSG) Crystal structure of uncharacterized protein (YP_001166107.1) from Novosphingobium aromaticivorans DSM 12444 at 1.16 A resolution To be published 0 0 0 0 2RGQ Crystal structure of a protein of unknown function with a cystatin-like fold (npun_r3134) from nostoc punctiforme pcc 73102 at 1.80 A resolution 2007-10-04 2007-10-16 Joint Center for Structural Genomics (JCSG) Crystal Structure of Domain of Unknown Function with a Cystatin-Like Fold (ZP_00111510.1) from Nostoc punctiforme PCC 73102 at 1.80 A resolution To be published 0 0 0 0 2O1V 17936703 Structure of full length GRP94 with ADP bound 2006-11-29 2007-10-23 Dollins, D.E.,Warren, J.J.,Immormino, R.M.,Gewirth, D.T. Structures of GRP94-Nucleotide Complexes Reveal Mechanistic Differences between the hsp90 Chaperones. Mol.Cell 2007 28 41 56 2O1V 17936703 Structure of full length GRP94 with ADP bound 2006-11-29 2007-10-23 Dollins, D.E.,Warren, J.J.,Immormino, R.M.,Gewirth, D.T. Structures of GRP94-Nucleotide Complexes Reveal Mechanistic Differences between the hsp90 Chaperones. Mol.Cell 2007 28 41 56 2QVS 17932298 Crystal Structure of Type IIa Holoenzyme of cAMP-dependent Protein Kinase 2007-08-08 2007-10-23 Wu, J.,Brown, S.H.J.,von Daake, S.,Taylor, S.S. PKA type IIalpha holoenzyme reveals a combinatorial strategy for isoform diversity. Science 2007 318 274 279 2PIS 17685517 Efforts toward Expansion of the Genetic Alphabet: Structure and Replication of Unnatural Base Pairs 2007-04-13 2007-10-30 Matsuda, S.,Fillo, J.D.,Henry, A.A.,Rai, P.,Wilkens, S.J.,Dwyer, T.J.,Geierstanger, B.H.,Wemmer, D.E.,Schultz, P.G.,Spraggon, G.,Romesberg, F.E. Efforts toward expansion of the genetic alphabet: structure and replication of unnatural base pairs. J.Am.Chem.Soc. 2007 129 10466 10473 2RKH Crystal structure of a putative AphA-like transcription factor (ZP_00208345.1) from Magnetospirillum magnetotacticum MS-1 at 2.00 A resolution 2007-10-16 2007-10-30 Joint Center for Structural Genomics (JCSG) Crystal structure of a putative AphA-like transcription factor (ZP_00208345.1) from Magnetospirillum magnetotacticum MS-1 at 2.00 A resolution To be published 0 0 0 0 2QKV 17923089 Crystal Structure of the C645S Mutant of the 5th PDZ Domain of InaD 2007-07-11 2007-11-06 Mishra, P.,Socolich, M.,Wall, M.A.,Graves, J.,Wang, Z.,Ranganathan, R. Dynamic Scaffolding in a G Protein-Coupled Signaling System. Cell(Cambridge,Mass.) 2007 131 80 92 2QVK 17962412 The second Ca2+-binding domain of the Na+-Ca2+ exchanger is essential for regulation: crystal structures and mutational analysis 2007-08-08 2007-11-13 Mercado Besserer, G.,Ottolia, M.,Nicoll, D.A.,Chaptal, V.,Cascio, D.,Philipson, K.D.,Abramson, J. The second Ca2+-binding domain of the Na+ Ca2+ exchanger is essential for regulation: crystal structures and mutational analysis Proc.Natl.Acad.Sci.Usa 2007 104 18467 18472 2QVM 17962412 The second Ca2+-binding domain of the Na+-Ca2+ exchanger is essential for regulation: crystal structures and mutational analysis 2007-08-08 2007-11-13 Mercado Besserer, G.,Ottolia, M.,Nicoll, D.A.,Chaptal, V.,Cascio, D.,Philipson, K.D.,Abramson, J. The second Ca2+-binding domain of the Na+ Ca2+ exchanger is essential for regulation: crystal structures and mutational analysis Proc.Natl.Acad.Sci.Usa 2007 104 18467 18472 3B5E Crystal structure of carboxylesterase (NP_108484.1) from Mesorhizobium loti at 1.75 A resolution 2007-10-25 2007-11-13 Joint Center for Structural Genomics (JCSG) Crystal structure of carboxylesterase (NP_108484.1) from Mesorhizobium loti at 1.75 A resolution To be published 0 0 0 0 3B5O CRYSTAL STRUCTURE OF A CADD-LIKE PROTEIN OF UNKNOWN FUNCTION (NPUN_F6505) FROM NOSTOC PUNCTIFORME PCC 73102 AT 1.35 A RESOLUTION 2007-10-26 2007-11-13 Joint Center for Structural Genomics (JCSG) Crystal structure of CADD-like protein of unknown function (ZP_00108531.1) from Nostoc punctiforme PCC 73102 at 1.35 A resolution (hexagonal form) To be published 0 0 0 0 3B5P Crystal structure of a cadd-like protein of unknown function (npun_f6505) from nostoc punctiforme pcc 73102 at 2.00 A resolution 2007-10-26 2007-11-13 Joint Center for Structural Genomics (JCSG) Crystal structure of CADD-like protein of unknown function (ZP_00108531.1) from Nostoc punctiforme PCC 73102 at 2.00 A resolution (monoclinic form) To be published 0 0 0 0 3BA3 Crystal structure of Pyridoxamine 5'-phosphate oxidase-like protein (NP_783940.1) from Lactobacillus plantarum at 1.55 A resolution 2007-11-07 2007-11-20 Joint Center for Structural Genomics (JCSG) Crystal structure of Pyridoxamine 5'-phosphate oxidase-like protein (NP_783940.1) from Lactobacillus plantarum at 1.55 A resolution To be published 0 0 0 0 3BBJ CRYSTAL STRUCTURE OF A PUTATIVE THIOESTERASE II (TFU_2367) FROM THERMOBIFIDA FUSCA YX AT 2.45 A RESOLUTION 2007-11-09 2007-11-20 Joint Center for Structural Genomics (JCSG) Crystal structure of putative thioesterase II (YP_290423.1) from Thermobifida fusca YX at 2.45 A resolution To be published 0 0 0 0 3BBY Crystal structure of glutathione S-transferase (NP_416804.1) from Escherichia coli K12 at 1.85 A resolution 2007-11-11 2007-11-20 Joint Center for Structural Genomics (JCSG) Crystal structure of glutathione S-transferase (NP_416804.1) from Escherichia coli K12 at 1.85 A resolution To be published 0 0 0 0 3B2Y CRYSTAL STRUCTURE OF a putative metallopeptidase (SDEN_2526) FROM SHEWANELLA DENITRIFICANS OS217 AT 1.74 A RESOLUTION 2007-10-19 2007-11-27 Joint Center for Structural Genomics (JCSG) Crystal structure of metallopeptidase containing co-catalytic metalloactive site (YP_563529.1) from Shewanella denitrificans OS217 at 1.74 A resolution To be published 0 0 0 0 2RF9 18046415 Crystal structure of the complex between the EGFR kinase domain and a Mig6 peptide 2007-09-28 2007-12-04 Zhang, X.,Pickin, K.A.,Bose, R.,Jura, N.,Cole, P.A.,Kuriyan, J. Inhibition of the EGF receptor by binding of MIG6 to an activating kinase domain interface. Nature 2007 450 741 744 3BF4 Crystal structure of an ethd-like protein (reut_b5694) from ralstonia eutropha jmp134 at 2.10 A resolution 2007-11-20 2007-12-04 Joint Center for Structural Genomics (JCSG) Crystal structure of EthD-like protein (YP_299883.1) from Ralstonia eutropha JMP134 at 2.10 A resolution To be published 0 0 0 0 2OG2 18035371 Crystal structure of chloroplast FtsY from Arabidopsis thaliana 2007-01-04 2007-12-11 Chandrasekar, S.,Chartron, J.,Jaru-Ampornpan, P.,Shan, S.O. Structure of the Chloroplast Signal Recognition Particle (SRP) Receptor: Domain Arrangement Modulates SRP-Receptor Interaction. J.Mol.Biol. 2007 375 425 436 2Q0Q 17636869 Structure of the Native M. Smegmatis Aryl Esterase 2007-05-22 2007-12-11 Mathews, I.,Soltis, M.,Saldajeno, M.,Ganshaw, G.,Sala, R.,Weyler, W.,Cervin, M.A.,Whited, G.,Bott, R. Structure of a novel enzyme that catalyzes acyl transfer to alcohols in aqueous conditions. Biochemistry 2007 46 8969 8979 2Q0S 17636869 Structure of the Inhibitor bound form of M. Smegmatis Aryl Esterase 2007-05-22 2007-12-11 Mathews, I.,Soltis, M.,Saldajeno, M.,Ganshaw, G.,Sala, R.,Weyler, W.,Cervin, M.A.,Whited, G.,Bott, R. Structure of a novel enzyme that catalyzes acyl transfer to alcohols in aqueous conditions. Biochemistry 2007 46 8969 8979 2O5X 18689687 Crystal structure of 1E9 LeuH47Trp/ArgH100Trp, an engineered Diels-Alderase Fab with nM steroid-binding affinity 2006-12-06 2007-12-18 Verdino, P.,Aldag, C.,Hilvert, D.,Wilson, I.A. Closely related antibody receptors exploit fundamentally different strategies for steroid recognition. Proc.Natl.Acad.Sci.Usa 2008 105 11725 11730 2O5Y 18689687 Crystal structure of the 1E9 LeuH47Trp/ArgH100Trp Fab progesterone complex 2006-12-06 2007-12-18 Verdino, P.,Aldag, C.,Hilvert, D.,Wilson, I.A. Closely related antibody receptors exploit fundamentally different strategies for steroid recognition. Proc.Natl.Acad.Sci.Usa 2008 105 11725 11730 2O5Z 18689687 Crystal structure of the 1E9 LeuH47Trp/ArgH100Trp Fab 5-beta-androstane-3,17-dione complex 2006-12-06 2007-12-18 Verdino, P.,Aldag, C.,Hilvert, D.,Wilson, I.A. Closely related antibody receptors exploit fundamentally different strategies for steroid recognition. Proc.Natl.Acad.Sci.Usa 2008 105 11725 11730 3BIX 18093522 Crystal structure of the extracellular esterase domain of Neuroligin-1 2007-12-01 2007-12-18 Arac, D.,Boucard, A.A.,Ozkan, E.,Strop, P.,Newell, E.,Sudhof, T.C.,Brunger, A.T. Structures of Neuroligin-1 and the Neuroligin-1/Neurexin-1beta Complex Reveal Specific Protein-Protein and Protein-Ca(2+) Interactions. Neuron 2007 56 992 1003 3BGW 18157148 The Structure Of A DnaB-Like Replicative Helicase And Its Interactions With Primase 2007-11-27 2007-12-25 Wang, G.,Klein, M.G.,Tokonzaba, E.,Zhang, Y.,Holden, L.G.,Chen, X.S. The structure of a DnaB-family replicative helicase and its interactions with primase. Nat.Struct.Mol.Biol. 2008 15 94 100 3BLZ Crystal structure of a ntf2-like protein of unknown function (sbal_0622) from shewanella baltica os155 at 1.75 A resolution 2007-12-11 2007-12-25 Joint Center for Structural Genomics (JCSG) Crystal structure of a NTF2-like protein of unknown function (YP_001049020.1) from Shewanella baltica OS155 at 1.75 A resolution To be published 0 0 0 0 2QAR 17962407 Structure of the 2TEL crystallization module fused to T4 lysozyme with a helical linker. 2007-06-15 2008-01-15 Nauli, S.,Farr, S.,Lee, Y.J.,Kim, H.Y.,Faham, S.,Bowie, J.U. Polymer-driven crystallization. Protein Sci. 2007 16 2542 2551 2R6J 17912370 Structure of Eugenol Synthase from Ocimum basilicum 2007-09-05 2008-01-15 Louie, G.V.,Baiga, T.J.,Bowman, M.E.,Koeduka, T.,Taylor, J.H.,Spassova, S.M.,Pichersky, E.,Noel, J.P. Structure and reaction mechanism of basil eugenol synthase Plos One 2007 2 0 0 2OPA YwhB binary complex with 2-Fluoro-p-hydroxycinnamate 2007-01-28 2008-02-05 Hackert, M.L.,Whitman, C.P.,Almrud, J.J.,Dasgupta, R.,Wang, S.C.,Johnson, W.H. The Crystal Structure of YwhB, a 4-Oxalocrotonate Tautomerase Homologue from Bacillus subtilis: the Structural Basis for Catalysis, Inhibition, and Reaction Stereoselectivity. TO BE PUBLISHED 0 0 0 0 3BPO 18243101 Crystal structure of the IL13-IL4R-IL13Ra ternary complex 2007-12-18 2008-02-05 Laporte, S.L.,Juo, Z.S.,Vaclavikova, J.,Colf, L.A.,Qi, X.,Heller, N.M.,Keegan, A.D.,Garcia, K.C. Molecular and Structural Basis of Cytokine Receptor Pleiotropy in the Interleukin-4/13 System. Cell(Cambridge,Mass.) 2008 132 259 272 2Z3X 18287075 Structure of a Protein-DNA Complex Essential for DNA Protection in Spore of Bacillus Species 2007-06-08 2008-02-12 Lee, K.S.,Bumbaca, D.,Kosman, J.,Setlow, P.,Jedrzejas, M.J. Structure of a protein-DNA complex essential for DNA protection in spores of Bacillus species. Proc. Natl. Acad. Sci. U.S.A. 2008 105 2806 2811 2Z3X 18287075 Structure of a Protein-DNA Complex Essential for DNA Protection in Spore of Bacillus Species 2007-06-08 2008-02-12 Lee, K.S.,Bumbaca, D.,Kosman, J.,Setlow, P.,Jedrzejas, M.J. Structure of a protein-DNA complex essential for DNA protection in spores of Bacillus species. Proc. Natl. Acad. Sci. U.S.A. 2008 105 2806 2811 3C25 18400177 Crystal Structure of NotI Restriction Endonuclease Bound to Cognate DNA 2008-01-24 2008-02-12 Lambert, A.R.,Sussman, D.,Shen, B.,Maunus, R.,Nix, J.,Samuelson, J.,Xu, S.Y.,Stoddard, B.L. Structures of the Rare-Cutting Restriction Endonuclease NotI Reveal a Unique Metal Binding Fold Involved in DNA Binding. Structure 2008 16 558 569 3C8V Crystal structure of putative acetyltransferase (YP_390128.1) from Desulfovibrio desulfuricans G20 at 2.28 A resolution 2008-02-13 2008-02-26 Joint Center for Structural Genomics (JCSG) Crystal structure of putative acetyltransferase (YP_390128.1) from Desulfovibrio desulfuricans G20 at 2.28 A resolution To be published 0 0 0 0 3CFB 18309081 High-resolution structure of blue fluorescent antibody EP2-19G2 in complex with stilbene hapten at 100K 2008-03-03 2008-03-18 Debler, E.W.,Kaufmann, G.F.,Meijler, M.M.,Heine, A.,Mee, J.M.,Pljevaljcic, G.,Di Bilio, A.J.,Schultz, P.G.,Millar, D.P.,Janda, K.D.,Wilson, I.A.,Gray, H.B.,Lerner, R.A. Deeply inverted electron-hole recombination in a luminescent antibody-stilbene complex. Science 2008 319 1232 1235 3BQ7 18334213 SAM domain of Diacylglycerol Kinase delta1 (E35G) 2007-12-19 2008-03-25 Harada, B.T.,Knight, M.J.,Imai, S.,Qiao, F.,Ramachander, R.,Sawaya, M.R.,Gingery, M.,Sakane, F.,Bowie, J.U. Regulation of Enzyme Localization by Polymerization: Polymer Formation by the SAM Domain of Diacylglycerol Kinase delta1 Structure 2008 16 380 387 3CIN CRYSTAL STRUCTURE OF A MYO-INOSITOL-1-PHOSPHATE SYNTHASE-RELATED PROTEIN (TM_1419) FROM THERMOTOGA MARITIMA MSB8 AT 1.70 A RESOLUTION 2008-03-11 2008-03-25 Joint Center for Structural Genomics (JCSG) Crystal structure of MYO-inositol-1-phosphate synthase-related protein (TM1419) from Thermotoga maritima at 1.70 A resolution To be published 0 0 0 0 2Q7Y 18295796 Structure of the endogenous iNKT cell ligand iGb3 bound to mCD1d 2007-06-07 2008-04-01 Zajonc, D.M.,Savage, P.B.,Bendelac, A.,Wilson, I.A.,Teyton, L. Crystal Structures of Mouse CD1d-iGb3 Complex and its Cognate Valpha14 T Cell Receptor Suggest a Model for Dual Recognition of Foreign and Self Glycolipids. J.Mol.Biol. 2008 377 1104 1116 3COD 18500332 Crystal Structure of T90A/D115A mutant of Bacteriorhodopsin 2008-03-27 2008-04-08 Joh, N.H.,Min, A.,Faham, S.,Whitelegge, J.P.,Yang, D.,Woods, V.L.,Bowie, J.U. Modest stabilization by most hydrogen-bonded side-chain interactions in membrane proteins. Nature 2008 453 1266 1270 3CFJ 18417480 Crystal structure of catalytic elimination antibody 34E4, orthorhombic crystal form 2008-03-04 2008-04-15 Debler, E.W.,Muller, R.,Hilvert, D.,Wilson, I.A. Conformational isomerism can limit antibody catalysis. J.Biol.Chem. 2008 283 16554 16560 3BZP 18451864 Crystal structural of the mutated N262A EscU C-terminal domain 2008-01-18 2008-04-22 Zarivach, R.,Deng, W.,Vuckovic, M.,Felise, H.B.,Nguyen, H.V.,Miller, S.I.,Finlay, B.B.,Strynadka, N.C. Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS. Nature 2008 453 124 127 3BZT 18451864 Crystal structural of the mutated P263A EscU C-terminal domain 2008-01-18 2008-04-22 Zarivach, R.,Deng, W.,Vuckovic, M.,Felise, H.B.,Nguyen, H.V.,Miller, S.I.,Finlay, B.B.,Strynadka, N.C. Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS. Nature 2008 453 124 127 3BZV 18451864 Crystal structural of the mutated T264A EscU C-terminal domain 2008-01-18 2008-04-22 Zarivach, R.,Deng, W.,Vuckovic, M.,Felise, H.B.,Nguyen, H.V.,Miller, S.I.,Finlay, B.B.,Strynadka, N.C. Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS. Nature 2008 453 124 127 3BZY 18451864 Crystal structure of the mutated Y316D EscU C-terminal domain 2008-01-18 2008-04-22 Zarivach, R.,Deng, W.,Vuckovic, M.,Felise, H.B.,Nguyen, H.V.,Miller, S.I.,Finlay, B.B.,Strynadka, N.C. Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS. Nature 2008 453 124 127 3C03 18451864 Crystal structure of the EscU C-terminal domain with P263A mutation,space group P 1 21 1 2008-01-18 2008-04-22 Zarivach, R.,Deng, W.,Vuckovic, M.,Felise, H.B.,Nguyen, H.V.,Miller, S.I.,Finlay, B.B.,Strynadka, N.C. Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS. Nature 2008 453 124 127 3CGU 18500331 Crystal Structure of unliganded Argos 2008-03-06 2008-05-20 Klein, D.E.,Stayrook, S.E.,Shi, F.,Narayan, K.,Lemmon, M.A. Structural basis for EGFR ligand sequestration by Argos. Nature 2008 453 1271 1275 3BBZ 18468621 Structure of the nucleocapsid-binding domain from the mumps virus phosphoprotein 2007-11-11 2008-05-27 Kingston, R.L.,Gay, L.S.,Baase, W.S.,Matthews, B.W. Structure of the nucleocapsid-binding domain from the mumps virus polymerase; an example of protein folding induced by crystallization J.Mol.Biol. 2008 379 719 731 2QW8 17912370 Structure of Eugenol Synthase from Ocimum basilicum 2007-08-09 2008-06-10 Louie, G.V.,Baiga, T.J.,Bowman, M.E.,Koeduka, T.,Taylor, J.H.,Spassova, S.M.,Pichersky, E.,Noel, J.P. Structure and reaction mechanism of basil eugenol synthase. Plos One 2007 2 0 0 2R6D 17947583 Crystal Form B1 2007-09-05 2008-06-10 Bailey, S.,Eliason, W.K.,Steitz, T.A. Structure of hexameric DnaB helicase and its complex with a domain of DnaG primase Science 2007 318 459 463 3CB2 18388201 Crystal structure of human gamma-tubulin bound to GDP 2008-02-21 2008-06-10 Rice, L.M.,Montabana, E.A.,Agard, D.A. The lattice as allosteric effector: structural studies of alphabeta- and gamma-tubulin clarify the role of GTP in microtubule assembly Proc.Natl.Acad.Sci.Usa 2008 105 5378 5383 2Q5B High resolution structure of Plastocyanin from Phormidium laminosum 2007-05-31 2008-06-17 Bukhman-DeRuyter, Y.S.,Fromme, R.,Grotjohann, I.,Schlarb-Ridley, B.,Mi, H.,Fromme, P. Plastocyanin at high resolution from Phormidium laminosum and the double mutant D44A, D45A To be Published 0 0 0 0 2R7O 19000820 Crystal Structure of VP1 apoenzyme of Rotavirus SA11 (N-terminal hexahistidine-tagged) 2007-09-09 2008-07-29 Lu, X.,McDonald, S.M.,Tortorici, M.A.,Tao, Y.J.,Vasquez-Del Carpio, R.,Nibert, M.L.,Patton, J.T.,Harrison, S.C. Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1. Structure 2008 16 1678 1688 2R7Q 19000820 Crystal Structure of VP1 apoenzyme of Rotavirus SA11 (C-terminal hexahistidine-tagged) 2007-09-09 2008-07-29 Lu, X.,McDonald, S.M.,Tortorici, M.A.,Tao, Y.J.,Vasquez-Del Carpio, R.,Nibert, M.L.,Patton, J.T.,Harrison, S.C. Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1. Structure 2008 16 1678 1688 2R7R 19000820 Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGACC) complex 2007-09-09 2008-07-29 Lu, X.,McDonald, S.M.,Tortorici, M.A.,Tao, Y.J.,Vasquez-Del Carpio, R.,Nibert, M.L.,Patton, J.T.,Harrison, S.C. Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1. Structure 2008 16 1678 1688 2R7V 19000820 Crystal Structure of Rotavirus SA11 VP1/RNA (GGCUUU) Complex 2007-09-10 2008-07-29 Lu, X.,McDonald, S.M.,Tortorici, M.A.,Tao, Y.J.,Vasquez-Del Carpio, R.,Nibert, M.L.,Patton, J.T.,Harrison, S.C. Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1. Structure 2008 16 1678 1688 2R7W 19000820 Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGACC)/mRNA 5'-CAP (m7GpppG) complex 2007-09-10 2008-07-29 Lu, X.,McDonald, S.M.,Tortorici, M.A.,Tao, Y.J.,Vasquez-Del Carpio, R.,Nibert, M.L.,Patton, J.T.,Harrison, S.C. Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1. Structure 2008 16 1678 1688 3DFV 18621058 Adjacent GATA DNA binding 2008-06-12 2008-07-29 Bates, D.L.,Chen, Y.,Kim, G.,Guo, L.,Chen, L. Crystal structures of multiple GATA zinc fingers bound to DNA reveal new insights into DNA recognition and self-association by GATA. J.Mol.Biol. 2008 381 1292 1306 3D7T 18614016 Structural basis for the recognition of c-Src by its inactivator Csk 2008-05-21 2008-08-05 Levinson, N.M.,Seeliger, M.A.,Cole, P.A.,Kuriyan, J. Structural basis for the recognition of c-Src by its inactivator Csk. Cell(Cambridge,Mass.) 2008 134 124 134 3D7U 18614016 Structural basis for the recognition of c-Src by its inactivator Csk 2008-05-21 2008-08-05 Levinson, N.M.,Seeliger, M.A.,Cole, P.A.,Kuriyan, J. Structural basis for the recognition of c-Src by its inactivator Csk. Cell(Cambridge,Mass.) 2008 134 124 134 3BVP 18682229 Crystal Structure of the N-terminal Catalytic Domain of TP901-1 Integrase 2008-01-07 2008-08-12 Yuan, P.,Gupta, K.,Van Duyne, G.D. Tetrameric structure of a serine integrase catalytic domain. Structure 2008 16 1275 1286 3BVP 18682229 Crystal Structure of the N-terminal Catalytic Domain of TP901-1 Integrase 2008-01-07 2008-08-12 Yuan, P.,Gupta, K.,Van Duyne, G.D. Tetrameric structure of a serine integrase catalytic domain. Structure 2008 16 1275 1286 3BVP 18682229 Crystal Structure of the N-terminal Catalytic Domain of TP901-1 Integrase 2008-01-07 2008-08-12 Yuan, P.,Gupta, K.,Van Duyne, G.D. Tetrameric structure of a serine integrase catalytic domain. Structure 2008 16 1275 1286 3E2B 18948118 Crystal structure of Dynein Light chain LC8 in complex with a peptide derived from Swallow 2008-08-05 2008-08-12 Benison, G.,Karplus, P.A.,Barbar, E. The interplay of ligand binding and quaternary structure in the diverse interactions of dynein light chain LC8. J.Mol.Biol. 2008 384 954 966 3D6Y 18658145 Crystal structure of R275E mutant of BMRR bound to DNA and berberine 2008-05-20 2008-08-26 Newberry, K.J.,Huffman, J.L.,Miller, M.C.,Vazquez-Laslop, N.,Neyfakh, A.A.,Brennan, R.G. Structures of BmrR-Drug Complexes Reveal a Rigid Multidrug Binding Pocket and Transcription Activation through Tyrosine Expulsion J.Biol.Chem. 2008 283 26795 26804 3D6Z 18658145 Crystal structure of R275E mutant of BMRR bound to DNA and rhodamine 2008-05-20 2008-08-26 Newberry, K.J.,Huffman, J.L.,Miller, M.C.,Vazquez-Laslop, N.,Neyfakh, A.A.,Brennan, R.G. Structures of BmrR-Drug Complexes Reveal a Rigid Multidrug Binding Pocket and Transcription Activation through Tyrosine Expulsion J.Biol.Chem. 2008 283 26795 26804 3DQW 18794843 c-Src kinase domain Thr338Ile mutant in complex with ATPgS 2008-07-09 2008-09-23 Azam, M.,Seeliger, M.A.,Gray, N.S.,Kuriyan, J.,Daley, G.Q. Activation of tyrosine kinases by mutation of the gatekeeper threonine. Nat.Struct.Mol.Biol. 2008 15 1109 1118 3DQX 18794843 chicken c-Src kinase domain in complex with ATPgS 2008-07-09 2008-09-23 Azam, M.,Seeliger, M.A.,Gray, N.S.,Kuriyan, J.,Daley, G.Q. Activation of tyrosine kinases by mutation of the gatekeeper threonine. Nat.Struct.Mol.Biol. 2008 15 1109 1118 3DMW 18805790 Crystal structure of human type III collagen G982-G1023 containing C-terminal cystine knot 2008-07-01 2008-09-30 Boudko, S.P.,Engel, J.,Okuyama, K.,Mizuno, K.,Bachinger, H.P.,Schumacher, M.A. Crystal structure of human type III collagen Gly991-Gly1032 cystine knot-containing peptide shows both 7/2 and 10/3 triple helical symmetries. J.Biol.Chem. 2008 283 32580 32589 3DQV 18805092 Structural Insights into NEDD8 Activation of Cullin-RING Ligases: Conformational Control of Conjugation 2008-07-09 2008-09-30 Duda, D.M.,Borg, L.A.,Scott, D.C.,Hunt, H.W.,Hammel, M.,Schulman, B.A. Structural insights into NEDD8 activation of cullin-RING ligases: conformational control of conjugation. Cell(Cambridge,Mass.) 2008 134 995 1006 2QB0 17962407 Structure of the 2TEL crystallization module fused to T4 lysozyme with an Ala-Gly-Pro linker. 2007-06-15 2008-10-14 Nauli, S.,Farr, S.,Lee, Y.J.,Kim, H.Y.,Faham, S.,Bowie, J.U. Polymer-driven crystallization. Protein Sci. 2007 16 2542 2551 2QB1 17962407 2TEL crystallization module 2007-06-15 2008-10-14 Nauli, S.,Farr, S.,Lee, Y.J.,Kim, H.Y.,Faham, S.,Bowie, J.U. Polymer-driven crystallization. Protein Sci. 2007 16 2542 2551 3EN4 18849971 Targeted polypharmacology: crystal structure of the c-Src kinase domain in complex with PP121, a multitargeted kinase inhibitor 2008-09-25 2008-10-14 Apsel, B.,Blair, J.A.,Gonzalez, B.,Nazif, T.M.,Feldman, M.E.,Aizenstein, B.,Hoffman, R.,Williams, R.L.,Shokat, K.M.,Knight, Z.A. Targeted polypharmacology: discovery of dual inhibitors of tyrosine and phosphoinositide kinases. Nat.Chem.Biol. 2008 4 691 699 3EN5 18849971 Targeted polypharmacology: crystal structure of the c-Src kinase domain in complex with PP494, a multitargeted kinase inhibitor 2008-09-25 2008-10-14 Apsel, B.,Blair, J.A.,Gonzalez, B.,Nazif, T.M.,Feldman, M.E.,Aizenstein, B.,Hoffman, R.,Williams, R.L.,Shokat, K.M.,Knight, Z.A. Targeted polypharmacology: discovery of dual inhibitors of tyrosine and phosphoinositide kinases. Nat.Chem.Biol. 2008 4 691 699 3EN6 18849971 Targeted polypharmacology: crystal structure of the c-Src kinase domain in complex with PP102, a multitargeted kinase inhibitor 2008-09-25 2008-10-14 Apsel, B.,Blair, J.A.,Gonzalez, B.,Nazif, T.M.,Feldman, M.E.,Aizenstein, B.,Hoffman, R.,Williams, R.L.,Shokat, K.M.,Knight, Z.A. Targeted polypharmacology: discovery of dual inhibitors of tyrosine and phosphoinositide kinases. Nat.Chem.Biol. 2008 4 691 699 3DBX 19004781 Structure of chicken CD1-2 with bound fatty acid 2008-06-02 2008-11-25 Zajonc, D.M.,Striegl, H.,Dascher, C.C.,Wilson, I.A. The crystal structure of avian CD1 reveals a smaller, more primordial antigen-binding pocket compared to mammalian CD1 Proc.Natl.Acad.Sci.Usa 2008 105 17925 17930 3DKE 18780783 Polar and non-polar cavities in phage T4 lysozyme 2008-06-24 2008-11-25 Liu, L.,Quillin, M.L.,Matthews, B.W. Use of experimental crystallographic phases to examine the hydration of polar and nonpolar cavities in T4 lysozyme Proc.Natl.Acad.Sci.USA 2008 105 14406 14411 3EEE 19032091 Probing the function of heme distortion in the H-NOX family 2008-09-04 2008-11-25 Olea, C.,Boon, E.M.,Pellicena, P.,Kuriyan, J.,Marletta, M.A. Probing the function of heme distortion in the H-NOX family. Acs Chem.Biol. 2008 3 703 710 3EFC 19081063 Crystal Structure of YaeT periplasmic domain 2008-09-08 2008-12-16 Gatzeva-Topalova, P.Z.,Walton, T.A.,Sousa, M.C. Crystal structure of YaeT: conformational flexibility and substrate recognition. Structure 2008 16 1873 1881 3EFC 19081063 Crystal Structure of YaeT periplasmic domain 2008-09-08 2008-12-16 Gatzeva-Topalova, P.Z.,Walton, T.A.,Sousa, M.C. Crystal structure of YaeT: conformational flexibility and substrate recognition. Structure 2008 16 1873 1881 3BR1 Crystal Structure of the Complex of Dequalinium Bound to QacR(E90Q), a Mutant of a Multidrug Binding Transcriptional Repressor 2007-12-20 2008-12-23 Brooks, B.E.,Hardie, K.M.,Brown, M.H.,Skurray, R.A.,Brennan, R.G. Formal electrostatic interactions do not govern QacR-cation affinity To be Published 0 0 0 0 3F9V 19073923 Crystal Structure Of A Near Full-Length Archaeal MCM: Functional Insights For An AAA+ Hexameric Helicase 2008-11-14 2008-12-30 Brewster, A.S.,Wang, G.,Yu, X.,Greenleaf, W.B.,Carazo, J.M.,Tjajadia, M.,Klein, M.G.,Chen, X.S. Crystal structure of a near-full-length archaeal MCM: Functional insights for an AAA+ hexameric helicase. Proc.Natl.Acad.Sci.USA 2008 105 20191 20196 3DHS 19095619 Mapping metal-binding sites in the catalytic domain of bacterial RNase P RNA 2008-06-18 2009-01-27 Kazantsev, A.V.,Krivenko, A.A.,Pace, N.R. Mapping metal-binding sites in the catalytic domain of bacterial RNase P RNA Rna 2009 15 266 276 3DNU 19150849 structure of MDT protein 2008-07-02 2009-01-27 Schumacher, M.A.,Piro, K.M.,Xu, W.,Hansen, S.,Lewis, K.,Brennan, R.G. Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB. Science 2009 323 396 401 3DNV 19150849 MDT Protein 2008-07-02 2009-01-27 Schumacher, M.A.,Piro, K.M.,Xu, W.,Hansen, S.,Lewis, K.,Brennan, R.G. Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB. Science 2009 323 396 401 3FMS 19307717 Crystal structure of TM0439, a GntR transcriptional regulator 2008-12-22 2009-02-10 Zheng, M.,Cooper, D.R.,Grossoehme, N.E.,Yu, M.,Hung, L.W.,Cieslik, M.,Derewenda, U.,Lesley, S.A.,Wilson, I.A.,Giedroc, D.P.,Derewenda, Z.S. Structure of Thermotoga maritima TM0439: implications for the mechanism of bacterial GntR transcription regulators with Zn2+-binding FCD domains. Acta Crystallogr.,Sect.D 2009 65 356 365 3C29 Cre-loxP Synaptic structure 2008-01-24 2009-02-17 Ghosh, K.,Van Duyne, G.D. Synapsis study in detail To be Published 0 0 0 0 3FRX 19114558 Crystal Structure of the Yeast Orthologue of RACK1, Asc1. 2009-01-08 2009-02-17 Coyle, S.M.,Gilbert, W.V.,Doudna, J.A. Direct link between RACK1 function and localization at the ribosome in vivo Mol.Cell.Biol. 2009 29 1626 1634 3FW1 19236722 Quinone Reductase 2 2009-01-16 2009-03-10 Winger, J.A.,Hantschel, O.,Superti-Furga, G.,Kuriyan, J. The structure of the leukemia drug imatinib bound to human quinone reductase 2 (NQO2). Bmc Struct.Biol. 2009 9 7 7 3G6H 19276351 Src Thr338Ile inhibited in the DFG-Asp-Out conformation 2009-02-06 2009-03-24 Seeliger, M.A.,Ranjitkar, P.,Kasap, C.,Shan, Y.,Shaw, D.E.,Shah, N.P.,Kuriyan, J.,Maly, D.J. Equally potent inhibition of c-Src and Abl by compounds that recognize inactive kinase conformations Cancer Res. 2009 69 2384 2392 3GMV 19332077 Crystal Structure of Beta-Lactamse Inhibitory Protein-I (BLIP-I) in Apo Form 2009-03-15 2009-03-31 Gretes, M.,Lim, D.C.,de Castro, L.,Jensen, S.E.,Kang, S.G.,Lee, K.J.,Strynadka, N.C. Insights into positive and negative requirements for protein-protein interactions by crystallographic analysis of the beta-lactamase inhibitory proteins BLIP, BLIP-I, and BLP. J.Mol.Biol. 2009 389 289 305 3GMW 19332077 Crystal Structure of Beta-Lactamse Inhibitory Protein-I (BLIP-I) in Complex with TEM-1 Beta-Lactamase 2009-03-15 2009-03-31 Gretes, M.,Lim, D.C.,de Castro, L.,Jensen, S.E.,Kang, S.G.,Lee, K.J.,Strynadka, N.C. Insights into positive and negative requirements for protein-protein interactions by crystallographic analysis of the beta-lactamase inhibitory proteins BLIP, BLIP-I, and BLP. J.Mol.Biol. 2009 389 289 305 3G5O 23523424 The crystal structure of the toxin-antitoxin complex RelBE2 (Rv2865-2866) from Mycobacterium tuberculosis 2009-02-05 2009-04-14 Miallau, L.,Jain, P.,Arbing, M.A.,Cascio, D.,Phan, T.,Ahn, C.J.,Chan, S.,Chernishof, I.,Maxson, M.,Chiang, J.,Jacobs Jr., W.R.,Eisenberg, D.S. Comparative proteomics identifies the cell-associated lethality of M. tuberculosis RelBE-like toxin-antitoxin complexes. Structure 2013 21 627 637 3G9M 19372434 GR DNA-binding domain:Sgk 16bp complex-44 2009-02-13 2009-04-21 Meijsing, S.H.,Pufall, M.A.,So, A.Y.,Bates, D.L.,Chen, L.,Yamamoto, K.R. DNA binding site sequence directs glucocorticoid receptor structure and activity. Science 2009 324 407 410 3GIN 19332552 Crystal structure of E454K-CBD1 2009-03-05 2009-04-21 Chaptal, V.,Ottolia, M.,Mercado-Besserer, G.,Nicoll, D.A.,Philipson, K.D.,Abramson, J. Structure and functional analysis of a Ca2+ sensor mutant of the na+/ca2+ exchanger J.Biol.Chem. 2009 284 14688 14692 3ESU 19361425 Crystal structure of anthrax-neutralizing single-chain antibody 14b7 2008-10-06 2009-04-28 Leysath, C.E.,Monzingo, A.F.,Maynard, J.A.,Barnett, J.,Georgiou, G.,Iverson, B.L.,Robertus, J.D. Crystal structure of the engineered neutralizing antibody m18 complexed to domain 4 of the anthrax protective antigen. J.Mol.Biol. 2009 387 680 693 3FY4 19359474 (6-4) Photolyase Crystal Structure 2009-01-21 2009-04-28 Hitomi, K.,DiTacchio, L.,Arvai, A.S.,Yamamoto, J.,Kim, S.T.,Todo, T.,Tainer, J.A.,Iwai, S.,Panda, S.,Getzoff, E.D. Functional motifs in the (6-4) photolyase crystal structure make a comparative framework for DNA repair photolyases and clock cryptochromes. Proc.Natl.Acad.Sci.USA 2009 106 6962 6967 3G3R 19390046 Crystal structure of a eukaryotic polyphosphate polymerase in complex with AppNHp-Mn2+ 2009-02-02 2009-05-05 Hothorn, M.,Neumann, H.,Lenherr, E.D.,Wehner, M.,Rybin, V.,Hassa, P.O.,Uttenweiler, A.,Reinhardt, M.,Schmidt, A.,Seiler, J.,Ladurner, A.G.,Herrmann, C.,Scheffzek, K.,Mayer, A. Catalytic core of a membrane-associated eukaryotic polyphosphate polymerase. Science 2009 324 513 516 3G3U 19390046 Crystal structure of a eukaryotic polyphosphate polymerase in complex with pyrophosphate 2009-02-02 2009-05-05 Hothorn, M.,Neumann, H.,Lenherr, E.D.,Wehner, M.,Rybin, V.,Hassa, P.O.,Uttenweiler, A.,Reinhardt, M.,Schmidt, A.,Seiler, J.,Ladurner, A.G.,Herrmann, C.,Scheffzek, K.,Mayer, A. Catalytic core of a membrane-associated eukaryotic polyphosphate polymerase. Science 2009 324 513 516 3FMP 19208808 Crystal structure of the nucleoporin Nup214 in complex with the DEAD-box helicase Ddx19 2008-12-22 2009-05-19 Napetschnig, J.,Kassube, S.A.,Debler, E.W.,Wong, R.W.,Blobel, G.,Hoelz, A. Structural and functional analysis of the interaction between the nucleoporin Nup214 and the DEAD-box helicase Ddx19. Proc.Natl.Acad.Sci.USA 2009 106 3089 3094 3EZ2 19461582 Partition protein-ADP complex 2008-10-22 2009-06-02 Dunham, T.D.,Xu, W.,Funnell, B.E.,Schumacher, M.A. Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA. Embo J. 2009 28 1792 1802 3EZ6 19461582 Structure of parA-ADP complex:tetragonal form 2008-10-22 2009-06-02 Dunham, T.D.,Xu, W.,Funnell, B.E.,Schumacher, M.A. Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA. Embo J. 2009 28 1792 1802 3EZ7 19461582 Partition Protein Apo form in space group I4122 2008-10-22 2009-06-02 Dunham, T.D.,Xu, W.,Funnell, B.E.,Schumacher, M.A. Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA. Embo J. 2009 28 1792 1802 3EZ9 19461582 Partition Protein 2008-10-22 2009-06-02 Dunham, T.D.,Xu, W.,Funnell, B.E.,Schumacher, M.A. Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA. Embo J. 2009 28 1792 1802 3EZF 19461582 Partition Protein 2008-10-22 2009-06-02 Dunham, T.D.,Xu, W.,Funnell, B.E.,Schumacher, M.A. Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA. Embo J. 2009 28 1792 1802 3G1G 19446529 Crystal structure of the C-terminal domain from the Rous Sarcoma Virus capsid protein: High pH 2009-01-29 2009-06-02 Bailey, G.D.,Hyun, J.K.,Mitra, A.K.,Kingston, R.L. Proton-linked dimerization of a retroviral capsid protein initiates capsid assembly Structure 2009 17 737 748 3H5A 19494832 Crystal structure of E. coli MccB 2009-04-21 2009-06-16 Regni, C.A.,Roush, R.F.,Miller, D.J.,Nourse, A.,Walsh, C.T.,Schulman, B.A. How the MccB bacterial ancestor of ubiquitin E1 initiates biosynthesis of the microcin C7 antibiotic. Embo J. 2009 28 1953 1964 3ETQ 19525958 X-ray structure of cysteine-free fragment of mHCN2 C-terminal region from amino acids 443-630 including C508N, C584S, and C601S mutations 2008-10-08 2009-06-23 Taraska, J.W.,Puljung, M.C.,Olivier, N.B.,Flynn, G.E.,Zagotta, W.N. Mapping the structure and conformational movements of proteins with transition metal ion FRET. Nat.Methods 2009 6 532 537 3HRS 19795834 Crystal Structure of the Manganese-activated Repressor ScaR: apo form 2009-06-09 2009-06-23 Stoll, K.E.,Draper, W.E.,Kliegman, J.I.,Golynskiy, M.V.,Brew-Appiah, R.A.,Phillips, R.K.,Brown, H.K.,Breyer, W.A.,Jakubovics, N.S.,Jenkinson, H.F.,Brennan, R.G.,Cohen, S.M.,Glasfeld, A. Characterization and structure of the manganese-responsive transcriptional regulator ScaR. Biochemistry 2009 48 10308 10320 3HRT 19795834 Crystal Structure of ScaR with bound Cd2+ 2009-06-09 2009-06-23 Stoll, K.E.,Draper, W.E.,Kliegman, J.I.,Golynskiy, M.V.,Brew-Appiah, R.A.,Phillips, R.K.,Brown, H.K.,Breyer, W.A.,Jakubovics, N.S.,Jenkinson, H.F.,Brennan, R.G.,Cohen, S.M.,Glasfeld, A. Characterization and structure of the manganese-responsive transcriptional regulator ScaR. Biochemistry 2009 48 10308 10320 3DXU The crystal structure of core JMJD2D complexed with FE and N-oxalylglycine 2008-07-25 2009-07-28 Chen, Z.,Zhang, G. The Crystal Structure of Core Jmjd2D To be Published 0 0 0 0 3HZI 19150849 Structure of mdt protein 2009-06-23 2009-07-28 Schumacher, M.A.,Piro, K.M.,Xu, W.,Hansen, S.,Lewis, K.,Brennan, R.G. Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB. Science 2009 323 396 401 3FJQ 19610074 Crystal structure of cAMP-dependent protein kinase catalytic subunit alpha in complex with peptide inhibitor PKI alpha (6-25) 2008-12-15 2009-08-04 Thompson, E.E.,Kornev, A.P.,Kannan, N.,Kim, C.,Ten Eyck, L.F.,Taylor, S.S. Comparative surface geometry of the protein kinase family. Protein Sci. 2009 18 2016 2026 3GI9 19608859 Crystal Structure of ApcT Transporter Bound to 7F11 Monoclonal Fab Fragment 2009-03-05 2009-08-18 Shaffer, P.L.,Goehring, A.,Shankaranarayanan, A.,Gouaux, E. Structure and mechanism of a na+-independent amino Acid transporter. Science 2009 325 1010 1014 3GUI 19663503 T4 lysozyme M102E/L99A mutant with buried charge in apolar cavity--Apo structure 2009-03-30 2009-08-25 Liu, L.,Baase, W.A.,Michael, M.M.,Matthews, B.W. Use of stabilizing mutations to engineer a charged group within a ligand-binding hydrophobic cavity in T4 lysozyme. Biochemistry 2009 48 8842 8851 3GUK 19663503 T4 lysozyme M102E/L99A mutant with buried charge in apolar cavity--Toluene binding 2009-03-30 2009-08-25 Liu, L.,Baase, W.A.,Michael, M.M.,Matthews, B.W. Use of stabilizing mutations to engineer a charged group within a ligand-binding hydrophobic cavity in T4 lysozyme. Biochemistry 2009 48 8842 8851 3GUL 19663503 T4 lysozyme M102E/L99A mutant with buried charge in apolar cavity--ethylbenzene binding 2009-03-30 2009-08-25 Liu, L.,Baase, W.A.,Michael, M.M.,Matthews, B.W. Use of stabilizing mutations to engineer a charged group within a ligand-binding hydrophobic cavity in T4 lysozyme. Biochemistry 2009 48 8842 8851 3GUM 19663503 T4 lysozyme M102E/L99A mutant with buried charge in apolar cavity--p-xylene binding 2009-03-30 2009-08-25 Liu, L.,Baase, W.A.,Michael, M.M.,Matthews, B.W. Use of stabilizing mutations to engineer a charged group within a ligand-binding hydrophobic cavity in T4 lysozyme. Biochemistry 2009 48 8842 8851 3GUN 19663503 T4 lysozyme M102E/L99A mutant with buried charge in apolar cavity--aniline binding 2009-03-30 2009-08-25 Liu, L.,Baase, W.A.,Michael, M.M.,Matthews, B.W. Use of stabilizing mutations to engineer a charged group within a ligand-binding hydrophobic cavity in T4 lysozyme. Biochemistry 2009 48 8842 8851 3GUO 19663503 T4 lysozyme M102E/L99A mutant with buried charge in apolar cavity--phenol binding 2009-03-30 2009-08-25 Liu, L.,Baase, W.A.,Michael, M.M.,Matthews, B.W. Use of stabilizing mutations to engineer a charged group within a ligand-binding hydrophobic cavity in T4 lysozyme. Biochemistry 2009 48 8842 8851 3GUP 19663503 T4 lysozyme M102E/L99A mutant with buried charge in apolar cavity--pyridine binding 2009-03-30 2009-08-25 Liu, L.,Baase, W.A.,Michael, M.M.,Matthews, B.W. Use of stabilizing mutations to engineer a charged group within a ligand-binding hydrophobic cavity in T4 lysozyme. Biochemistry 2009 48 8842 8851 3HAQ 19603754 Crystal structure of bacteriorhodopsin mutant I148A crystallized from bicelles 2009-05-02 2009-09-22 Joh, N.H.,Oberai, A.,Yang, D.,Whitelegge, J.P.,Bowie, J.U. Similar energetic contributions of packing in the core of membrane and water-soluble proteins. J.Am.Chem.Soc. 2009 131 10846 10847 3HAR 19603754 Crystal structure of bacteriorhodopsin mutant I148V crystallized from bicelles 2009-05-02 2009-09-22 Joh, N.H.,Oberai, A.,Yang, D.,Whitelegge, J.P.,Bowie, J.U. Similar energetic contributions of packing in the core of membrane and water-soluble proteins. J.Am.Chem.Soc. 2009 131 10846 10847 3HAS 19603754 Crystal structure of bacteriorhodopsin mutant L152A crystallized from bicelles 2009-05-02 2009-09-22 Joh, N.H.,Oberai, A.,Yang, D.,Whitelegge, J.P.,Bowie, J.U. Similar energetic contributions of packing in the core of membrane and water-soluble proteins. J.Am.Chem.Soc. 2009 131 10846 10847 3DXT Crystal structure of the catalytic core domain of JMJD2D 2008-07-25 2009-10-06 Chen, Z.,Zhang, G. Crystal structure of the catalytic core domain of jmjd2d To be Published 0 0 0 0 3DXT Crystal structure of the catalytic core domain of JMJD2D 2008-07-25 2009-10-06 Chen, Z.,Zhang, G. Crystal structure of the catalytic core domain of jmjd2d To be Published 0 0 0 0 3GZQ 19800308 HUMAN SOD1 A4V Metal-free Variant 2009-04-07 2009-10-13 Galaleldeen, A.,Strange, R.W.,Whitson, L.J.,Antonyuk, S.V.,Narayana, N.,Taylor, A.B.,Schuermann, J.P.,Holloway, S.P.,Hasnain, S.S.,Hart, P.J. Structural and biophysical properties of metal-free pathogenic SOD1 mutants A4V and G93A. Arch.Biochem.Biophys. 2009 492 40 47 3HF1 19728742 Crystal structure of human p53R2 2009-05-10 2009-10-13 Smith, P.,Zhou, B.,Ho, N.,Yuan, Y.C.,Su, L.,Tsai, S.C.,Yen, Y. 2.6 A X-ray crystal structure of human p53R2, a p53-inducible ribonucleotide reductase . Biochemistry 2009 48 11134 11141 3IVQ 19818708 Structures of SPOP-Substrate Complexes: Insights into Molecular Architectures of BTB-Cul3 Ubiquitin Ligases: SPOPMATH-CiSBC2 2009-09-01 2009-10-20 Zhuang, M.,Calabrese, M.F.,Liu, J.,Waddell, M.B.,Nourse, A.,Hammel, M.,Miller, D.J.,Walden, H.,Duda, D.M.,Seyedin, S.N.,Hoggard, T.,Harper, J.W.,White, K.P.,Schulman, B.A. Structures of SPOP-Substrate Complexes: Insights into Molecular Architectures of BTB-Cul3 Ubiquitin Ligases. Mol.Cell 2009 36 39 50 3GRL 19414022 Crystal Structure of the Monomer of the p115 Tether Globular Head Domain 2009-03-25 2009-11-03 An, Y.,Chen, C.Y.,Moyer, B.,Rotkiewicz, P.,Elsliger, M.A.,Godzik, A.,Wilson, I.A.,Balch, W.E. Structural and functional analysis of the globular head domain of p115 provides insight into membrane tethering. J.Mol.Biol. 2009 391 26 41 3K86 19915006 Crystal structure of NADH:FAD oxidoreductase (TftC) - apo form 2009-10-13 2009-11-10 Webb, B.N.,Ballinger, J.W.,Kim, E.,Belchik, S.M.,Lam, K.S.,Youn, B.,Nissen, M.S.,Xun, L.,Kang, C. Characterization of chlorophenol 4-monooxygenase (TftD) and NADH:FAD oxidoreductase (TftC) of Burkholderia cepacia AC1100. J.Biol.Chem. 2010 285 2014 2027 3K87 19915006 Crystal structure of NADH:FAD oxidoreductase (TftC) - FAD complex 2009-10-13 2009-11-10 Webb, B.N.,Ballinger, J.W.,Kim, E.,Belchik, S.M.,Lam, K.S.,Youn, B.,Nissen, M.S.,Xun, L.,Kang, C. Characterization of chlorophenol 4-monooxygenase (TftD) and NADH:FAD oxidoreductase (TftC) of Burkholderia cepacia AC1100. J.Biol.Chem. 2010 285 2014 2027 3K88 19915006 Crystal structure of NADH:FAD oxidoreductase (TftC) - FAD, NADH complex 2009-10-13 2009-11-10 Webb, B.N.,Ballinger, J.W.,Kim, E.,Belchik, S.M.,Lam, K.S.,Youn, B.,Nissen, M.S.,Xun, L.,Kang, C. Characterization of chlorophenol 4-monooxygenase (TftD) and NADH:FAD oxidoreductase (TftC) of Burkholderia cepacia AC1100. J.Biol.Chem. 2010 285 2014 2027 3FO9 19968282 Crystal structure of aldolase antibody 33F12 Fab' in complex with hapten 1,3-diketone 2008-12-29 2009-12-22 Zhu, X.,Tanaka, F.,Lerner, R.A.,Barbas, C.F.,Wilson, I.A. Direct observation of an enamine intermediate in amine catalysis J.Am.Chem.Soc. 2009 131 18206 18207 3KEX 20007378 Crystal structure of the catalytically inactive kinase domain of the human epidermal growth factor receptor 3 (HER3) 2009-10-26 2009-12-22 Jura, N.,Shan, Y.,Cao, X.,Shaw, D.E.,Kuriyan, J. Structural analysis of the catalytically inactive kinase domain of the human EGF receptor 3. Proc.Natl.Acad.Sci.USA 2009 106 21608 21613 3IR5 20053990 Crystal structure of NarGHI mutant NarG-H49C 2009-08-21 2010-01-05 Rothery, R.A.,Bertero, M.G.,Spreter, T.,Bouromand, N.,Strynadka, N.C.,Weiner, J.H. Protein crystallography reveals a role for the FS0 cluster of Escherichia coli nitrate reductase A (NarGHI) in enzyme maturation. J.Biol.Chem. 2010 285 8801 8807 3IR6 20053990 Crystal structure of NarGHI mutant NarG-H49S 2009-08-21 2010-01-05 Rothery, R.A.,Bertero, M.G.,Spreter, T.,Bouromand, N.,Strynadka, N.C.,Weiner, J.H. Protein crystallography reveals a role for the FS0 cluster of Escherichia coli nitrate reductase A (NarGHI) in enzyme maturation. J.Biol.Chem. 2010 285 8801 8807 3IR7 20053990 Crystal structure of NarGHI mutant NarG-R94S 2009-08-21 2010-01-05 Rothery, R.A.,Bertero, M.G.,Spreter, T.,Bouromand, N.,Strynadka, N.C.,Weiner, J.H. Protein crystallography reveals a role for the FS0 cluster of Escherichia coli nitrate reductase A (NarGHI) in enzyme maturation. J.Biol.Chem. 2010 285 8801 8807 2X04 20098421 Crystal structure of the PABC-TNRC6C complex 2009-12-04 2010-01-19 Jinek, M.,Fabian, M.R.,Coyle, S.M.,Sonenberg, N.,Doudna, J.A. Structural Insights Into the Human Gw182-Pabc Interaction in Microrna-Mediated Deadenylation Nat.Struct.Mol.Biol. 2010 17 238 0 3KJO 20080730 Crystal Structure of hPOT1V2-dTrUd(AGGGTTAG) 2009-11-03 2010-01-19 Nandakumar, J.,Podell, E.R.,Cech, T.R. How telomeric protein POT1 avoids RNA to achieve specificity for single-stranded DNA. Proc.Natl.Acad.Sci.USA 2010 107 651 656 3KJP 20080730 Crystal Structure of hPOT1V2-GGTTAGGGTTAG 2009-11-03 2010-01-19 Nandakumar, J.,Podell, E.R.,Cech, T.R. How telomeric protein POT1 avoids RNA to achieve specificity for single-stranded DNA. Proc.Natl.Acad.Sci.USA 2010 107 651 656 3JS6 20106979 Crystal structure of apo psk41 parM protein 2009-09-09 2010-01-26 Popp, D.,Xu, W.,Narita, A.,Brzoska, A.J.,Skurray, R.A.,Firth, N.,Goshdastider, U.,Maeda, Y.,Robinson, R.C.,Schumacher, M.A. Structure and filament dynamics of the pSK41 actin-like ParM protein: implications for plasmid DNA segregation. J.Biol.Chem. 2010 285 10130 10140 3L24 20000741 Crystal Structure of the Nerve Agent Degrading Organophosphate Anhydrolase/Prolidase in Complex with Inhibitors 2009-12-14 2010-01-26 Vyas, N.K.,Nickitenko, A.,Rastogi, V.K.,Shah, S.S.,Quiocho, F.A. Structural insights into the dual activities of the nerve agent degrading organophosphate anhydrolase/prolidase. Biochemistry 2010 49 547 559 2W9P 19304935 Crystal Structure of Potato Multicystatin 2009-01-28 2010-02-02 Nissen, M.S.,Kumar, G.N.,Youn, B.,Knowles, D.B.,Lam, K.S.,Ballinger, W.J.,Knowles, N.R.,Kang, C. Characterization of Solanum Tuberosum Multicystatin and its Structural Comparison with Other Cystatins. Plant Cell 2009 21 861 0 3L7G 20000741 Crystal structure of organophosphate anhydrolase/prolidase 2009-12-28 2010-02-09 Vyas, N.K.,Nickitenko, A.,Rastogi, V.K.,Shah, S.S.,Quiocho, F.A. Structural insights into the dual activities of the nerve agent degrading organophosphate anhydrolase/prolidase. Biochemistry 2010 49 547 559 3LJN Ankyrin repeat protein from Leishmania major 2010-01-26 2010-02-09 Merritt, E.A.,Holmes, M.A.,Napuli, A.,Kalyuzhniy, O.,Van Voorhis, W.C.,Buckner, F.S.,Fan, E.,Zucker, F.,Verlinde, L.M.J.,Hol, W.G.J. Ankyrin repeat protein from Leishmania major To be Published 0 0 0 0 3IDW 20150898 Crystal structure of Sla1 homology domain 2 2009-07-21 2010-02-23 Di Pietro, S.M.,Cascio, D.,Feliciano, D.,Bowie, J.U.,Payne, G.S. Regulation of clathrin adaptor function in endocytosis: novel role for the SAM domain. Embo J. 2010 29 1033 1044 3KMD 20159469 Crystal structure of the p53 core domain bound to a full consensus site as a self-assembled tetramer 2009-11-10 2010-02-23 Chen, Y.,Dey, R.,Chen, L. Crystal structure of the p53 core domain bound to a full consensus site as a self-assembled tetramer. Structure 2010 18 246 256 3EGW The crystal structure of the NarGHI mutant NarH - C16A 2008-09-11 2010-03-02 Parkin, A.,Blanford, C.F.,Rothery, R.A.,Macey, R.,Bertero, M.,Strynadka, N.C.J.,Armstrong, F.A.,Weiner, J.H. When width is more important than height: Barriers to electron transfer in E.coli nitrate reductase To be Published 0 0 0 0 3IGC 20152159 Smallpox virus topoisomerase-DNA transition state 2009-07-27 2010-03-02 Perry, K.,Hwang, Y.,Bushman, F.D.,Van Duyne, G.D. Insights from the Structure of a Smallpox Virus Topoisomerase-DNA Transition State Mimic. Structure 2010 18 127 137 3M3I Hypothetical protein from Leishmania major 2010-03-09 2010-03-23 Merritt, E.A.,Carruthers, J.,Arakaki, T.,Holmes, M.,Kalyushniy, O.,Napuli, A.,Van Voorhis, W.C.,Buckner, F.S.,Fan, E.,Zucker, F.,Verlinde, L.M.J.,Hol, W.G.J. Hypothetical protein from Leishmania major To be Published 0 0 0 0 3KZ5 20236989 Structure of cdomain 2009-12-07 2010-03-31 Schumacher, M.A.,Piro, K.M.,Xu, W. Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes. Nucleic Acids Res. 2010 38 4514 4526 3LZ9 20175559 The Crystal Structure of 5-epi-aristolochene synthase M4 mutant complexed with (2-trans,6-trans)-2-fluorofarnesyl diphosphate 2010-03-01 2010-04-07 Noel, J.P.,Dellas, N.,Faraldos, J.A.,Zhao, M.,Hess, B.A.,Smentek, L.,Coates, R.M.,O'Maille, P.E. Structural elucidation of cisoid and transoid cyclization pathways of a sesquiterpene synthase using 2-fluorofarnesyl diphosphates. Acs Chem.Biol. 2010 5 377 392 3LZ9 20175559 The Crystal Structure of 5-epi-aristolochene synthase M4 mutant complexed with (2-trans,6-trans)-2-fluorofarnesyl diphosphate 2010-03-01 2010-04-07 Noel, J.P.,Dellas, N.,Faraldos, J.A.,Zhao, M.,Hess, B.A.,Smentek, L.,Coates, R.M.,O'Maille, P.E. Structural elucidation of cisoid and transoid cyclization pathways of a sesquiterpene synthase using 2-fluorofarnesyl diphosphates. Acs Chem.Biol. 2010 5 377 392 3K19 20196071 OmpF porin 2009-09-26 2010-04-14 Kefala, G.,Ahn, C.,Krupa, M.,Esquivies, L.,Maslennikov, I.,Kwiatkowski, W.,Choe, S. Structures of the OmpF porin crystallized in the presence of foscholine-12. Protein Sci. 2010 19 1117 1125 3K1B 20196071 Structure of OmpF porin 2009-09-26 2010-04-14 Kefala, G.,Ahn, C.,Krupa, M.,Esquivies, L.,Maslennikov, I.,Kwiatkowski, W.,Choe, S. Structures of the OmpF porin crystallized in the presence of foscholine-12. Protein Sci. 2010 19 1117 1125 3MG1 20368334 Crystal structure of the orange carotenoid protein from cyanobacteria Synechocystis sp. PCC 6803 2010-04-05 2010-04-14 Wilson, A.,Kinney, J.N.,Zwart, P.H.,Punginelli, C.,D'Haene, S.,Perreau, F.,Klein, M.G.,Kirilovsky, D.,Kerfeld, C.A. Structural determinants underlying photoprotection in the photoactive orange carotenoid protein of cyanobacteria. J.Biol.Chem. 2010 285 18364 18375 3MG2 20368334 Crystal structure of the orange carotenoid protein Y44S mutant from cyanobacteria synechocystis sp. PCC 6803 2010-04-05 2010-04-14 Wilson, A.,Kinney, J.N.,Zwart, P.H.,Punginelli, C.,D'Haene, S.,Perreau, F.,Klein, M.G.,Kirilovsky, D.,Kerfeld, C.A. Structural determinants underlying photoprotection in the photoactive orange carotenoid protein of cyanobacteria. J.Biol.Chem. 2010 285 18364 18375 3M99 20434206 Structure of the Ubp8-Sgf11-Sgf73-Sus1 SAGA DUB module 2010-03-21 2010-05-05 Kohler, A.,Zimmerman, E.,Schneider, M.,Hurt, E.,Zheng, N. Structural basis for assembly and activation of the heterotetrameric SAGA histone H2B deubiquitinase module. Cell(Cambridge,Mass.) 2010 141 606 617 3L1F 20440841 Bovine AlphaA crystallin 2009-12-11 2010-05-12 Laganowsky, A.,Benesch, J.L.,Landau, M.,Ding, L.,Sawaya, M.R.,Cascio, D.,Huang, Q.,Robinson, C.V.,Horwitz, J.,Eisenberg, D. Crystal structures of truncated alphaA and alphaB crystallins reveal structural mechanisms of polydispersity important for eye lens function. Protein Sci. 2010 19 1031 1043 3MJB 20410239 Cricket Paralysis Virus IGR IRES Domain 3 RNA bound to sulfate 2010-04-12 2010-05-19 Kieft, J.S.,Chase, E.,Costantino, D.A.,Golden, B.L. Identification and characterization of anion binding sites in RNA. Rna 2010 16 1118 1123 3MGV 20462863 Cre recombinase-DNA transition state 2010-04-07 2010-05-26 Gibb, B.,Gupta, K.,Ghosh, K.,Sharp, R.,Chen, J.,Van Duyne, G.D. Requirements for catalysis in the Cre recombinase active site. Nucleic Acids Res. 2010 38 5817 5832 3M00 20175559 Crystal Structure of 5-epi-aristolochene synthase M4 mutant complexed with (2-cis,6-trans)-2-fluorofarnesyl diphosphate 2010-03-02 2010-07-07 Noel, J.P.,Dellas, N.,Faraldos, J.A.,Zhao, M.,Hess, B.A.,Smentek, L.,Coates, R.M.,O'Maille, P.E. Structural elucidation of cisoid and transoid cyclization pathways of a sesquiterpene synthase using 2-fluorofarnesyl diphosphates. Acs Chem.Biol. 2010 5 377 392 3M00 20175559 Crystal Structure of 5-epi-aristolochene synthase M4 mutant complexed with (2-cis,6-trans)-2-fluorofarnesyl diphosphate 2010-03-02 2010-07-07 Noel, J.P.,Dellas, N.,Faraldos, J.A.,Zhao, M.,Hess, B.A.,Smentek, L.,Coates, R.M.,O'Maille, P.E. Structural elucidation of cisoid and transoid cyclization pathways of a sesquiterpene synthase using 2-fluorofarnesyl diphosphates. Acs Chem.Biol. 2010 5 377 392 3N3U 20622875 Crystal Structure of IbpAFic2 2010-05-20 2010-07-14 Xiao, J.,Worby, C.A.,Mattoo, S.,Sankaran, B.,Dixon, J.E. Structural basis of Fic-mediated adenylylation. Nat.Struct.Mol.Biol. 2010 17 1004 1010 3N3U 20622875 Crystal Structure of IbpAFic2 2010-05-20 2010-07-14 Xiao, J.,Worby, C.A.,Mattoo, S.,Sankaran, B.,Dixon, J.E. Structural basis of Fic-mediated adenylylation. Nat.Struct.Mol.Biol. 2010 17 1004 1010 3JZ3 20594156 Structure of the cytoplasmic segment of histidine kinase QseC 2009-09-22 2010-07-21 Xie, W.,Dickson, C.,Kwiatkowski, W.,Choe, S. Structure of the Cytoplasmic Segment of Histidine Kinase Receptor QseC, a Key Player in Bacterial Virulence. Protein Pept.Lett. 2010 17 1383 1391 3JZ3 20594156 Structure of the cytoplasmic segment of histidine kinase QseC 2009-09-22 2010-07-21 Xie, W.,Dickson, C.,Kwiatkowski, W.,Choe, S. Structure of the Cytoplasmic Segment of Histidine Kinase Receptor QseC, a Key Player in Bacterial Virulence. Protein Pept.Lett. 2010 17 1383 1391 3NMO 21048711 Crystal structure of an engineered monomeric CLC-ec1 Cl-/H+ transporter 2010-06-22 2010-07-21 Robertson, J.L.,Kolmakova-Partensky, L.,Miller, C. Design, function and structure of a monomeric ClC transporter. Nature 2010 468 844 847 3MMU 20599513 Crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima 2010-04-20 2010-07-28 Pereira, J.H.,Chen, Z.,McAndrew, R.P.,Sapra, R.,Chhabra, S.R.,Sale, K.L.,Simmons, B.A.,Adams, P.D. Biochemical characterization and crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima. J.Struct.Biol. 2010 172 372 379 3LD8 20679243 Structure of JMJD6 and Fab Fragments 2010-01-12 2010-08-04 Hong, X.,Zang, J.,White, J.,Wang, C.,Pan, C.H.,Zhao, R.,Murphy, R.C.,Dai, S.,Henson, P.,Kappler, J.W.,Hagman, J.,Zhang, G. Interaction of JMJD6 with single-stranded RNA. Proc.Natl.Acad.Sci.USA 2010 107 14568 14572 3LDB 20679243 Structure of JMJD6 complexd with ALPHA-KETOGLUTARATE and Fab Fragment. 2010-01-12 2010-08-04 Hong, X.,Zang, J.,White, J.,Wang, C.,Pan, C.H.,Zhao, R.,Murphy, R.C.,Dai, S.,Henson, P.,Kappler, J.W.,Hagman, J.,Zhang, G. Interaction of JMJD6 with single-stranded RNA. Proc.Natl.Acad.Sci.USA 2010 107 14568 14572 3MOJ 20673833 Structure of the RNA binding domain of the Bacillus subtilis YxiN protein complexed with a fragment of 23S ribosomal RNA 2010-04-22 2010-08-04 Hardin, J.W.,Hu, Y.X.,McKay, D.B. Structure of the RNA binding domain of a DEAD-box helicase bound to its ribosomal RNA target reveals a novel mode of recognition by an RNA recognition motif. J.Mol.Biol. 2010 402 412 427 3NVR 20735135 Modulating Heme Redox Potential Through Protein-Induced Porphyrin Distortion 2010-07-08 2010-09-08 Olea, C.,Kuriyan, J.,Marletta, M.A. Modulating heme redox potential through protein-induced porphyrin distortion J.Am.Chem.Soc. 2010 132 12794 12795 3NVU 20735135 Modulating Heme Redox Potential Through Protein-Induced Porphyrin Distortion 2010-07-08 2010-09-08 Olea, C.,Kuriyan, J.,Marletta, M.A. Modulating heme redox potential through protein-induced porphyrin distortion. J.Am.Chem.Soc. 2010 132 12794 12795 3MJ6 20813955 Crystal structure of the gammadelta T cell costimulatory receptor Junctional Adhesion Molecule-Like Protein, JAML 2010-04-12 2010-09-22 Verdino, P.,Witherden, D.A.,Havran, W.L.,Wilson, I.A. The molecular interaction of CAR and JAML recruits the central cell signal transducer PI3K. Science 2010 329 1210 1214 3OGK 20927106 Structure of COI1-ASK1 in complex with coronatine and an incomplete JAZ1 degron 2010-08-16 2010-10-13 Sheard, L.B.,Tan, X.,Mao, H.,Withers, J.,Ben-Nissan, G.,Hinds, T.R.,Kobayashi, Y.,Hsu, F.F.,Sharon, M.,Browse, J.,He, S.Y.,Rizo, J.,Howe, G.A.,Zheng, N. Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor. Nature 2010 468 400 405 3MLH 21068239 Crystal structure of the 2009 H1N1 influenza virus hemagglutinin receptor-binding domain 2010-04-16 2010-12-01 Dubois, R.M.,Aguilar-Yanez, J.M.,Mendoza-Ochoa, G.I.,Oropeza-Almazan, Y.,Schultz-Cherry, S.,Alvarez, M.M.,White, S.W.,Russell, C.J. The Receptor-Binding Domain of Influenza Virus Hemagglutinin Produced in Escherichia coli Folds into Its Native, Immunogenic Structure. J.Virol. 2011 85 865 872 3OQM 21106498 structure of ccpa-hpr-ser46p-ackA2 complex 2010-09-03 2010-12-08 Schumacher, M.A.,Sprehe, M.,Bartholomae, M.,Hillen, W.,Brennan, R.G. Structures of carbon catabolite protein A-(HPr-Ser46-P) bound to diverse catabolite response element sites reveal the basis for high-affinity binding to degenerate DNA operators. Nucleic Acids Res. 2011 39 2931 2942 3OQN 21106498 Structure of ccpa-hpr-ser46-p-gntr-down cre 2010-09-03 2010-12-08 Schumacher, M.A.,Sprehe, M.,Bartholomae, M.,Hillen, W.,Brennan, R.G. Structures of carbon catabolite protein A-(HPr-Ser46-P) bound to diverse catabolite response element sites reveal the basis for high-affinity binding to degenerate DNA operators. Nucleic Acids Res. 2011 39 2931 2942 3PA8 21095570 Structure of the C. difficile TcdB cysteine protease domain in complex with a peptide inhibitor 2010-10-18 2010-12-15 Puri, A.W.,Lupardus, P.J.,Deu, E.,Albrow, V.E.,Garcia, K.C.,Bogyo, M.,Shen, A. Rational design of inhibitors and activity-based probes targeting Clostridium difficile virulence factor TcdB. Chem.Biol. 2010 17 1201 1211 3L0F 26306196 High resolution structure of C-Phycocyanin from Thermosynechococcus elongatus 2009-12-09 2010-12-29 Fromme, R.,Ishchenko, A.,Metz, M.,Chowdhury, S.R.,Basu, S.,Boutet, S.,Fromme, P.,White, T.A.,Barty, A.,Spence, J.C.,Weierstall, U.,Liu, W.,Cherezov, V. Serial femtosecond crystallography of soluble proteins in lipidic cubic phase. Iucrj 2015 2 545 551 3K06 21187429 Crystal Structure of CNG mimicking NaK mutant, NaK-NTPP, K+ complex 2009-09-24 2011-01-12 Derebe, M.G.,Zeng, W.,Li, Y.,Alam, A.,Jiang, Y. Structural studies of ion permeation and Ca2+ blockage of a bacterial channel mimicking the cyclic nucleotide-gated channel pore. Proc.Natl.Acad.Sci.USA 2011 108 592 597 3K08 21187429 Crystal Structure of CNG mimicking NaK mutant, NaK-NTPP, Na+ complex 2009-09-24 2011-01-12 Derebe, M.G.,Zeng, W.,Li, Y.,Alam, A.,Jiang, Y. Structural studies of ion permeation and Ca2+ blockage of a bacterial channel mimicking the cyclic nucleotide-gated channel pore. Proc.Natl.Acad.Sci.USA 2011 108 592 597 3OB0 20852065 A non-self sugar mimic of the HIV glycan shield shows enhanced antigenicity 2010-08-06 2011-01-12 Doores, K.J.,Fulton, Z.,Hong, V.,Patel, M.K.,Scanlan, C.N.,Wormald, M.R.,Finn, M.G.,Burton, D.R.,Wilson, I.A.,Davis, B.G. A nonself sugar mimic of the HIV glycan shield shows enhanced antigenicity. Proc.Natl.Acad.Sci.USA 2010 107 17107 17112 3ONH 21209884 Crystal structure of UBA2ufd-Ubc9: insights into E1-E2 interactions in Sumo pathways 2010-08-28 2011-01-12 Wang, J.,Taherbhoy, A.M.,Hunt, H.W.,Seyedin, S.N.,Miller, D.W.,Miller, D.J.,Huang, D.T.,Schulman, B.A. Crystal structure of UBA2(ufd)-Ubc9: insights into E1-E2 interactions in Sumo pathways. Plos One 2010 5 0 0 3P9C 21177481 Crystal structure of perennial ryegrass LpOMT1 bound to SAH 2010-10-17 2011-01-12 Louie, G.V.,Bowman, M.E.,Tu, Y.,Mouradov, A.,Spangenberg, G.,Noel, J.P. Structure-Function Analyses of a Caffeic Acid O-Methyltransferase from Perennial Ryegrass Reveal the Molecular Basis for Substrate Preference. Plant Cell 2010 22 4114 4127 3Q17 21174448 Structure of a slow CLC Cl-/H+ antiporter from a cyanobacterium in Bromide 2010-12-16 2011-01-19 Jayaram, H.,Robertson, J.L.,Wu, F.,Williams, C.,Miller, C. Structure of a Slow CLC Cl(-)/H(+) Antiporter from a Cyanobacterium. Biochemistry 2011 50 788 794 3PVB 21300294 Crystal structure of (73-244)RIa:C holoenzyme of cAMP-dependent Protein kinase 2010-12-06 2011-02-02 Boettcher, A.J.,Wu, J.,Kim, C.,Yang, J.,Bruystens, J.,Cheung, N.,Pennypacker, J.K.,Blumenthal, D.A.,Kornev, A.P.,Taylor, S.S. Crystal structure of (73-244)RIa:C holoenzyme of cAMP-dependent Protein kinase Structure 2011 19 265 276 3PEE 21317893 Structure of the C. difficile TcdB cysteine protease domain 2010-10-26 2011-02-16 Shen, A.,Lupardus, P.J.,Gersch, M.M.,Puri, A.W.,Albrow, V.E.,Garcia, K.C.,Bogyo, M. Defining an allosteric circuit in the cysteine protease domain of Clostridium difficile toxins. Nat.Struct.Mol.Biol. 2011 18 364 371 3QQD 20515040 Human SOD1 H80R variant, P212121 crystal form 2011-02-15 2011-03-09 Seetharaman, S.V.,Winkler, D.D.,Taylor, A.B.,Cao, X.,Whitson, L.J.,Doucette, P.A.,Valentine, J.S.,Schirf, V.,Demeler, B.,Carroll, M.C.,Culotta, V.C.,Hart, P.J. Disrupted zinc-binding sites in structures of pathogenic SOD1 variants D124V and H80R. Biochemistry 2010 49 5714 5725 3KVS The high resolution structure of C-Phycocyanin from Galdieria Sulphuraria 2009-11-30 2011-04-13 Fromme, R.,Thangaraj, B.,Vanselow, C.,Fromme, P. High resolution structure of C-Phycocyanin from Galdieria sulphuraria reveals new insights of the Phycobilisome To be Published 0 0 0 0 3OC5 21440558 Crystal Structure of the vibrio cholerae secreted colonization factor TcpF 2010-08-09 2011-04-20 Megli, C.J.,Yuen, A.S.,Kolappan, S.,Richardson, M.R.,Dharmasena, M.N.,Krebs, S.J.,Taylor, R.K.,Craig, L. Crystal Structure of the Vibrio cholerae Colonization Factor TcpF and Identification of a Functional Immunogenic Site. J.Mol.Biol. 2011 409 146 158 3QKY 21463635 Crystal structure of Rhodothermus marinus BamD 2011-02-02 2011-04-20 Sandoval, C.M.,Baker, S.L.,Jansen, K.,Metzner, S.I.,Sousa, M.C. Crystal structure of BamD: an essential component of the beta-Barrel assembly machinery of gram-negative bacteria. J.Mol.Biol. 2011 409 348 357 3QIB 21490152 Crystal structure of the 2B4 TCR in complex with MCC/I-Ek 2011-01-26 2011-04-27 Newell, E.W.,Ely, L.K.,Kruse, A.C.,Reay, P.A.,Rodriguez, S.N.,Lin, A.E.,Kuhns, M.S.,Garcia, K.C.,Davis, M.M. Structural basis of specificity and cross-reactivity in T cell receptors specific for cytochrome c-I-E(k). J.Immunol. 2011 186 5823 5832 3OD0 21526164 Crystal structure of cGMP bound cGMP-dependent protein kinase(92-227) 2010-08-10 2011-05-11 Kim, J.J.,Casteel, D.E.,Huang, G.,Kwon, T.H.,Ren, R.K.,Zwart, P.,Headd, J.J.,Brown, N.G.,Chow, D.C.,Palzkill, T.,Kim, C. Co-Crystal Structures of PKG Ibeta (92-227) with cGMP and cAMP Reveal the Molecular Details of Cyclic-Nucleotide Binding Plos One 2011 6 0 0 3OGJ 21526164 Crystal structure of partial apo (92-227) of cGMP-dependent protein kinase 2010-08-16 2011-05-11 Kim, J.J.,Casteel, D.E.,Huang, G.,Kwon, T.H.,Ren, R.K.,Zwart, P.,Headd, J.J.,Brown, N.G.,Chow, D.C.,Palzkill, T.,Kim, C. Co-Crystal Structures of PKG Ibeta (92-227) with cGMP and cAMP Reveal the Molecular Details of Cyclic-Nucleotide Binding Plos One 2011 6 0 0 2Y9H 21572442 Structure A of CRISPR endoribonuclease Cse3 bound to 19 nt RNA 2011-02-14 2011-05-18 Sashital, D.G.,Jinek, M.,Doudna, J.A. An RNA-Induced Conformational Change Required for Crispr RNA Cleavage by the Endoribonuclease Cse3. Nat.Struct.Mol.Biol. 2011 18 680 0 3RIZ 21666665 Crystal structure of the plant steroid receptor BRI1 ectodomain 2011-04-14 2011-06-22 Hothorn, M.,Belkhadir, Y.,Dreux, M.,Dabi, T.,Noel, J.P.,Wilson, I.A.,Chory, J. Structural basis of steroid hormone perception by the receptor kinase BRI1. Nature 2011 474 467 471 3RGO 21730175 Crystal Structure of PTPMT1 2011-04-08 2011-07-06 Xiao, J.,Engel, J.L.,Zhang, J.,Chen, M.J.,Manning, G.,Dixon, J.E. Structural and functional analysis of PTPMT1, a phosphatase required for cardiolipin synthesis. Proc.Natl.Acad.Sci.USA 2011 108 11860 11865 3RGO 21730175 Crystal Structure of PTPMT1 2011-04-08 2011-07-06 Xiao, J.,Engel, J.L.,Zhang, J.,Chen, M.J.,Manning, G.,Dixon, J.E. Structural and functional analysis of PTPMT1, a phosphatase required for cardiolipin synthesis. Proc.Natl.Acad.Sci.USA 2011 108 11860 11865 3RGQ 21730175 Crystal Structure of PTPMT1 in complex with PI(5)P 2011-04-08 2011-07-06 Xiao, J.,Engel, J.L.,Zhang, J.,Chen, M.J.,Manning, G.,Dixon, J.E. Structural and functional analysis of PTPMT1, a phosphatase required for cardiolipin synthesis. Proc.Natl.Acad.Sci.USA 2011 108 11860 11865 3PM1 21264225 Structure of QacR E90Q bound to Ethidium 2010-11-15 2011-07-13 Peters, K.M.,Brooks, B.E.,Schumacher, M.A.,Skurray, R.A.,Brennan, R.G.,Brown, M.H. A single acidic residue can guide binding site selection but does not govern QacR cationic-drug affinity. Plos One 2011 6 0 0 3RVZ 21743477 Crystal structure of the NavAb voltage-gated sodium channel (Ile217Cys, 2.8 A) 2011-05-06 2011-07-13 Payandeh, J.,Scheuer, T.,Zheng, N.,Catterall, W.A. The crystal structure of a voltage-gated sodium channel. Nature 2011 475 353 358 3S1S 21724614 Characterization and crystal structure of the type IIG restriction endonuclease BpuSI 2011-05-16 2011-07-13 Shen, B.W.,Xu, D.,Chan, S.H.,Zheng, Y.,Zhu, Z.,Xu, S.Y.,Stoddard, B.L. Characterization and crystal structure of the type IIG restriction endonuclease RM.BpuSI. Nucleic Acids Res. 2011 39 8223 8236 3SOL 23458689 Crystal structure of the type 2 secretion system pilotin GspS 2011-06-30 2011-07-13 Korotkov, K.V.,Hol, W.G. Crystal structure of the pilotin from the enterohemorrhagic Escherichia coli type II secretion system. J.Struct.Biol. 2013 182 186 191 3O2V Crystal structure of 1E9 PheL89Ser/LeuH47Trp/MetH100bPhe, an engineered Diels-Alderase Fab with modified specificity and catalytic activity 2010-07-22 2011-07-20 Verdino, P.,Aldag, C.,Jonsson, S.,Hilvert, D.,Wilson, I.A. Crystal structure of 1E9 PheL89Ser/LeuH47Trp/MetH100bPhe, an engineered Diels-Alderase Fab with modified specificity and catalytic activity To be Published 0 0 0 0 3O2W Crystal structure of the 1E9 PheL89Ser/LeuH47Trp/MetH100bPhe Fab in complex with a 39A11 transition state analog 2010-07-22 2011-07-20 Verdino, P.,Aldag, C.,Jonsson, S.,Hilvert, D.,Wilson, I.A. Crystal structure of the 1E9 PheL89Ser/LeuH47Trp/MetH100bPhe Fab in complex with a 39A11 transition state analog To be Published 0 0 0 0 3QQY 21784983 Crystal structure of a novel LAGLIDADG homing endonuclease, I-OnuI (from Ophiostoma novo-ulmi subsp. americana) 2011-02-16 2011-07-20 Takeuchi, R.,Lambert, A.R.,Mak, A.N.,Jacoby, K.,Dickson, R.J.,Gloor, G.B.,Scharenberg, A.M.,Edgell, D.R.,Stoddard, B.L. Tapping natural reservoirs of homing endonucleases for targeted gene modification. Proc.Natl.Acad.Sci.USA 2011 108 13077 13082 3P57 21278418 Crystal structure of the p300 TAZ2 domain bound to MEF2 on DNA 2010-10-08 2011-08-10 He, J.,Ye, J.,Cai, Y.,Riquelme, C.,Liu, J.O.,Liu, X.,Han, A.,Chen, L. Structure of p300 bound to MEF2 on DNA reveals a mechanism of enhanceosome assembly. Nucleic Acids Res. 2011 39 4464 4474 3SE3 21854986 human IFNa2-IFNAR ternary complex 2011-06-10 2011-08-31 Thomas, C.,Moraga, I.,Levin, D.,Krutzik, P.O.,Podoplelova, Y.,Trejo, A.,Lee, C.,Yarden, G.,Vleck, S.E.,Glenn, J.S.,Nolan, G.P.,Piehler, J.,Schreiber, G.,Garcia, K.C. Structural linkage between ligand discrimination and receptor activation by type I interferons. Cell(Cambridge,Mass.) 2011 146 621 632 3SWF 21878911 CNGA1 621-690 containing CLZ domain 2011-07-13 2011-09-14 Shuart, N.G.,Haitin, Y.,Camp, S.S.,Black, K.D.,Zagotta, W.N. Molecular mechanism for 3:1 subunit stoichiometry of rod cyclic nucleotide-gated ion channels. Nat Commun 2011 2 457 457 3SWY 21878911 CNGA3 626-672 containing CLZ domain 2011-07-14 2011-09-14 Shuart, N.G.,Haitin, Y.,Camp, S.S.,Black, K.D.,Zagotta, W.N. Molecular mechanism for 3:1 subunit stoichiometry of rod cyclic nucleotide-gated ion channels. Nat Commun 2011 2 457 457 3SHR 21893290 Crystal Structure of cGMP-dependent Protein Kinase Reveals Novel Site of Interchain Communication 2011-06-16 2011-09-21 Osborne, B.W.,Wu, J.,McFarland, C.J.,Nickl, C.K.,Sankaran, B.,Casteel, D.E.,Woods, V.L.,Kornev, A.P.,Taylor, S.S.,Dostmann, W.R. Crystal Structure of cGMP-Dependent Protein Kinase Reveals Novel Site of Interchain Communication. Structure 2011 19 1317 1327 3SKV 21965680 Salicylyl-Acyltransferase SsfX3 from a Tetracycline Biosynthetic Pathway 2011-06-23 2011-10-05 Pickens, L.B.,Sawaya, M.R.,Rasool, H.,Pashkov, I.,Yeates, T.O.,Tang, Y. Structural and Biochemical Characterization of the Salicylyl-acyltranferase SsfX3 from a Tetracycline Biosynthetic Pathway. J.Biol.Chem. 2011 286 41539 41551 3T1C 21933962 Crystal Structure of NaK Channel D66Y Mutant 2011-07-21 2011-10-05 Sauer, D.B.,Zeng, W.,Raghunathan, S.,Jiang, Y. Protein interactions central to stabilizing the K+ channel selectivity filter in a four-sited configuration for selective K+ permeation. Proc.Natl.Acad.Sci.USA 2011 108 16634 16639 3T4K 21964459 Arabidopsis histidine kinase 4 sensor domain in complex with N-benzyladenine 2011-07-26 2011-10-05 Hothorn, M.,Dabi, T.,Chory, J. Structural basis for cytokinin recognition by Arabidopsis thaliana histidine kinase 4. Nat.Chem.Biol. 2011 7 766 768 3T4O 21964459 Arabidopsis histidine kinase 4 sensor domain in complex with dihydrozeatin 2011-07-26 2011-10-05 Hothorn, M.,Dabi, T.,Chory, J. Structural basis for cytokinin recognition by Arabidopsis thaliana histidine kinase 4. Nat.Chem.Biol. 2011 7 766 768 3QS6 21952050 Crystal structure of LeuT mutant F259V,I359Q bound to sodium and L-tryptophan 2011-02-19 2011-10-12 Piscitelli, C.L.,Gouaux, E. Insights into transport mechanism from LeuT engineered to transport tryptophan. Embo J. 2012 31 228 235 3SHQ 21949367 Crystal Structure of UBLCP1 2011-06-16 2011-10-12 Guo, X.,Engel, J.L.,Xiao, J.,Tagliabracci, V.S.,Wang, X.,Huang, L.,Dixon, J.E. UBLCP1 is a 26S proteasome phosphatase that regulates nuclear proteasome activity. Proc.Natl.Acad.Sci.USA 2011 108 18649 18654 3SHQ 21949367 Crystal Structure of UBLCP1 2011-06-16 2011-10-12 Guo, X.,Engel, J.L.,Xiao, J.,Tagliabracci, V.S.,Wang, X.,Huang, L.,Dixon, J.E. UBLCP1 is a 26S proteasome phosphatase that regulates nuclear proteasome activity. Proc.Natl.Acad.Sci.USA 2011 108 18649 18654 3OQO 21106498 Ccpa-hpr-ser46p-syn cre 2010-09-03 2011-10-26 Schumacher, M.A.,Sprehe, M.,Bartholomae, M.,Hillen, W.,Brennan, R.G. Structures of carbon catabolite protein A-(HPr-Ser46-P) bound to diverse catabolite response element sites reveal the basis for high-affinity binding to degenerate DNA operators. Nucleic Acids Res. 2011 39 2931 2942 3S8V 21984209 Crystal structure of LRP6-Dkk1 complex 2011-05-31 2011-10-26 Cheng, Z.,Biechele, T.,Wei, Z.,Morrone, S.,Moon, R.T.,Wang, L.,Xu, W. Crystal structures of the extracellular domain of LRP6 and its complex with DKK1. Nat.Struct.Mol.Biol. 2011 18 1204 1210 3T4M 22009746 Ac-AChBP ligand binding domain mutated to human alpha-7 nAChR (intermediate) 2011-07-26 2011-10-26 Nemecz, A.,Taylor, P. Creating an alpha-7 nicotinic acetylcholine recognition domain from the acetylcholine binding protein: crystallographic and ligand selectivity analyses J.Biol.Chem. 2011 286 42555 42565 3PFZ Crystal structure of Cel7A from Talaromyces emersonii in complex with cellotetraose 2010-10-29 2011-11-02 Qin, L.,Pereira, J.H.,McAndrew, R.P.,Simmons, B.A.,Sapra, R.,Adams, P.D.,Sale, K.L. Crystal structure of Cel7A from Talaromyces emersonii in complex with cellotetraose TO BE PUBLISHED 0 0 0 0 3T98 22036567 Molecular Architecture of the Transport Channel of the Nuclear Pore Complex: Nup54/Nup58 2011-08-02 2011-11-02 Solmaz, S.R.,Chauhan, R.,Blobel, G.,Melcak, I. Molecular architecture of the transport channel of the nuclear pore complex. Cell(Cambridge,Mass.) 2011 147 590 602 3PUU 22025387 Crystal Structure of Glu121Gln mutant of E. coli Aminopeptidase N 2010-12-06 2011-11-16 Gumpena, R.,Kishor, C.,Ganji, R.J.,Addlagatta, A. Discovery of alpha, beta- and alpha, gamma-Diamino Acid Scaffolds for the Inhibition of M1 Family Aminopeptidases Chemmedchem 2011 6 1971 1976 3QAM 22138346 Crystal Structure of Glu208Ala mutant of catalytic subunit of cAMP-dependent protein kinase 2011-01-11 2011-12-07 Yang, J.,Wu, J.,Steichen, J.M.,Kornev, A.P.,Deal, M.S.,Li, S.,Sankaran, B.,Woods, V.L.,Taylor, S.S. A conserved Glu-Arg salt bridge connects coevolved motifs that define the eukaryotic protein kinase fold. J.Mol.Biol. 2012 415 666 679 3SDQ 22153510 Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 2011-06-09 2011-12-14 McAndrew, R.P.,Peralta-Yahya, P.P.,DeGiovanni, A.,Pereira, J.H.,Hadi, M.Z.,Keasling, J.D.,Adams, P.D. Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production. Structure 2011 19 1876 1884 3SDR 22153510 Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 2011-06-09 2011-12-14 McAndrew, R.P.,Peralta-Yahya, P.P.,DeGiovanni, A.,Pereira, J.H.,Hadi, M.Z.,Keasling, J.D.,Adams, P.D. Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production. Structure 2011 19 1876 1884 3SDT 22153510 Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 2011-06-09 2011-12-14 McAndrew, R.P.,Peralta-Yahya, P.P.,DeGiovanni, A.,Pereira, J.H.,Hadi, M.Z.,Keasling, J.D.,Adams, P.D. Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production. Structure 2011 19 1876 1884 3SDV 22153510 Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 2011-06-09 2011-12-14 McAndrew, R.P.,Peralta-Yahya, P.P.,DeGiovanni, A.,Pereira, J.H.,Hadi, M.Z.,Keasling, J.D.,Adams, P.D. Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production. Structure 2011 19 1876 1884 3SEI 22153505 Crystal Structure of Caskin1 Tandem SAMs 2011-06-10 2011-12-14 Stafford, R.L.,Hinde, E.,Knight, M.J.,Pennella, M.A.,Ear, J.,Digman, M.A.,Gratton, E.,Bowie, J.U. Tandem SAM domain structure of human Caskin1: a presynaptic, self-assembling scaffold for CASK. Structure 2011 19 1826 1836 3RTY 21907720 Structure of an Enclosed Dimer Formed by The Drosophila Period Protein 2011-05-04 2011-12-21 King, H.A.,Hoelz, A.,Crane, B.R.,Young, M.W. Structure of an enclosed dimer formed by the Drosophila period protein. J.Mol.Biol. 2011 413 561 572 3TRQ 22170046 Crystal structure of native rabbit skeletal calsequestrin 2011-09-09 2011-12-21 Sanchez, E.J.,Lewis, K.M.,Munske, G.R.,Nissen, M.S.,Kang, C. Glycosylation of Skeletal Calsequestrin: IMPLICATIONS FOR ITS FUNCTION. J.Biol.Chem. 2012 287 3042 3050 3US3 22170046 Recombinant rabbit skeletal calsequestrin-MPD complex 2011-11-22 2011-12-21 Sanchez, E.J.,Lewis, K.M.,Munske, G.R.,Nissen, M.S.,Kang, C. Glycosylation of skeletal calsequestrin: implications for its function. J.Biol.Chem. 2012 287 3042 3050 3RUQ 22193720 Crystal structure of Cpn-WT in complex with ADP from Methanococcus maripaludis 2011-05-05 2012-01-04 Pereira, J.H.,Ralston, C.Y.,Douglas, N.R.,Kumar, R.,Lopez, T.,McAndrew, R.P.,Knee, K.M.,King, J.A.,Frydman, J.,Adams, P.D. Mechanism of nucleotide sensing in group II chaperonins. Embo J. 2012 31 731 740 3RUV 22193720 Crystal structure of Cpn-rls in complex with ATP analogue from Methanococcus maripaludis 2011-05-05 2012-01-04 Pereira, J.H.,Ralston, C.Y.,Douglas, N.R.,Kumar, R.,Lopez, T.,McAndrew, R.P.,Knee, K.M.,King, J.A.,Frydman, J.,Adams, P.D. Mechanism of nucleotide sensing in group II chaperonins. Embo J. 2012 31 731 740 3U60 22194570 Structure of T4 Bacteriophage Clamp Loader Bound To Open Clamp, DNA and ATP Analog 2011-10-11 2012-01-04 Kelch, B.A.,Makino, D.L.,O'Donnell, M.,Kuriyan, J. How a DNA polymerase clamp loader opens a sliding clamp. Science 2011 334 1675 1680 3UKN 22230959 Structure of the C-linker/CNBHD of zELK channels in C 2 2 21 space group 2011-11-09 2012-01-04 Brelidze, T.I.,Carlson, A.E.,Sankaran, B.,Zagotta, W.N. Structure of the carboxy-terminal region of a KCNH channel. Nature 2012 481 530 533 3UKT 22230959 Structure of the C-linker/CNBHD of zELK channels in P1 21 1 space group 2011-11-09 2012-01-04 Brelidze, T.I.,Carlson, A.E.,Sankaran, B.,Zagotta, W.N. Structure of the carboxy-terminal region of a KCNH channel. Nature 2012 481 530 533 3UKV 22230959 Structure of the C-linker/CNBHD of zELK channels in P 1 21 1 space group, crystallized in the presence of cAMP 2011-11-09 2012-01-04 Brelidze, T.I.,Carlson, A.E.,Sankaran, B.,Zagotta, W.N. Structure of the carboxy-terminal region of a KCNH channel. Nature 2012 481 530 533 3USI 22245965 Crystal structure of LeuT bound to L-leucine in space group P2 from lipid bicelles 2011-11-23 2012-01-11 Wang, H.,Elferich, J.,Gouaux, E. Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context. Nat.Struct.Mol.Biol. 2012 19 212 219 3USK 22245965 Crystal structure of LeuT bound to L-leucine in space group P21 from lipid bicelles 2011-11-23 2012-01-11 Wang, H.,Elferich, J.,Gouaux, E. Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context. Nat.Struct.Mol.Biol. 2012 19 212 219 3USO 22245965 Crystal structure of LeuT bound to L-selenomethionine in space group P21212 from lipid bicelles 2011-11-23 2012-01-11 Wang, H.,Elferich, J.,Gouaux, E. Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context. Nat.Struct.Mol.Biol. 2012 19 212 219 3UE5 22334675 ECP-cleaved Actin in complex with Spir domain D 2011-10-28 2012-02-15 Chen, C.K.,Sawaya, M.R.,Phillips, M.L.,Reisler, E.,Quinlan, M.E. Multiple Forms of Spire-Actin Complexes and their Functional Consequences. J.Biol.Chem. 2012 287 10684 10692 3V3L 22267412 Crystal structure of human RNF146 WWE domain in complex with iso-ADPRibose 2011-12-13 2012-02-15 Wang, Z.,Michaud, G.A.,Cheng, Z.,Zhang, Y.,Hinds, T.R.,Fan, E.,Cong, F.,Xu, W. Recognition of the iso-ADP-ribose moiety in poly(ADP-ribose) by WWE domains suggests a general mechanism for poly(ADP-ribosyl)ation-dependent ubiquitination. Genes Dev. 2012 26 235 240 4AGW 20299508 Discovery of a small molecule type II inhibitor of wild-type and gatekeeper mutants of BCR-ABL, PDGFRalpha, Kit, and Src kinases 2012-02-01 2012-02-15 Weisberg, E.,Choi, H.G.,Ray, A.,Barrett, R.,Zhang, J.,Sim, T.,Zhou, W.,Seeliger, M.,Cameron, M.,Azam, M.,Fletcher, J.A.,Debiec-Rychter, M.,Mayeda, M.,Moreno, D.,Kung, A.L.,Janne, P.A.,Khosravi-Far, R.,Melo, J.V.,Manley, P.W.,Adamia, S.,Wu, C.,Gray, N.,Griffin, J.D. Discovery of a Small-Molecule Type II Inhibitor of Wild-Type and Gatekeeper Mutants of Bcr-Abl, Pdgfralpha, Kit, and Src Kinases: Novel Type II Inhibitor of Gatekeeper Mutants. Blood 2010 115 4206 0 3TRP 22337878 Crystal structure of recombinant rabbit skeletal calsequestrin 2011-09-09 2012-02-22 Sanchez, E.J.,Lewis, K.M.,Danna, B.R.,Kang, C. High-capacity Ca2+ Binding of Human Skeletal Calsequestrin. J.Biol.Chem. 2012 287 11592 11601 4DEP 22426547 Structure of the IL-1b signaling complex 2012-01-21 2012-03-21 Thomas, C.,Bazan, J.F.,Garcia, K.C. Structure of the activating IL-1 receptor signaling complex. Nat.Struct.Mol.Biol. 2012 19 455 457 3S1L 22081946 Crystal Structure of Apo-form FurX 2011-05-15 2012-04-25 Kang, C.,Hayes, R.,Sanchez, E.J.,Webb, B.N.,Li, Q.,Hooper, T.,Nissen, M.S.,Xun, L. Furfural reduction mechanism of a zinc-dependent alcohol dehydrogenase from Cupriavidus necator JMP134. Mol.Microbiol. 2012 83 85 95 3STW 22523203 Crystal Structure of tomato Methylketone Synthase I complexed with 2-tridecanone 2011-07-11 2012-05-02 Auldridge, M.E.,Guo, Y.,Austin, M.B.,Ramsey, J.,Fridman, E.,Pichersky, E.,Noel, J.P. Emergent Decarboxylase Activity and Attenuation of alpha/beta-Hydrolase Activity during the Evolution of Methylketone Biosynthesis in Tomato. Plant Cell 2012 24 1596 1607 3STY 22523203 Crystal Structure of tomato Methylketone Synthase I T18A mutant 2011-07-11 2012-05-02 Auldridge, M.E.,Guo, Y.,Austin, M.B.,Ramsey, J.,Fridman, E.,Pichersky, E.,Noel, J.P. Emergent Decarboxylase Activity and Attenuation of alpha/beta-Hydrolase Activity during the Evolution of Methylketone Biosynthesis in Tomato. Plant Cell 2012 24 1596 1607 4DFC 22331906 Core UvrA/TRCF complex 2012-01-23 2012-05-02 Deaconescu, A.M.,Sevostyanova, A.,Artsimovitch, I.,Grigorieff, N. Nucleotide excision repair (NER) machinery recruitment by the transcription-repair coupling factor involves unmasking of a conserved intramolecular interface. Proc.Natl.Acad.Sci.USA 2012 109 3353 3358 4EKW 22678296 Crystal structure of the NavAb voltage-gated sodium channel (wild-type, 3.2 A) 2012-04-10 2012-05-16 Payandeh, J.,Gamal El-Din, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Crystal structure of a voltage-gated sodium channel in two potentially inactivated states. Nature 2012 486 135 139 3SLK 22634636 Structure of ketoreductase and enoylreductase didomain from modular polyketide synthase 2011-06-24 2012-05-30 Zheng, J.,Gay, D.C.,Demeler, B.,White, M.A.,Keatinge-Clay, A.T. Divergence of multimodular polyketide synthases revealed by a didomain structure. Nat.Chem.Biol. 2012 8 615 621 4EQF 22550182 Trip8b-1a#206-567 interacting with the carboxy-terminal seven residues of HCN2 2012-04-18 2012-05-30 Bankston, J.R.,Camp, S.S.,Dimaio, F.,Lewis, A.S.,Chetkovich, D.M.,Zagotta, W.N. Structure and stoichiometry of an accessory subunit TRIP8b interaction with hyperpolarization-activated cyclic nucleotide-gated channels. Proc.Natl.Acad.Sci.USA 2012 109 7899 7904 4DFX 22617327 Crystal structure of myristoylated K7C catalytic subunit of cAMP-dependent protein kinase in complex with SP20 and AMP-PNP 2012-01-24 2012-06-06 Bastidas, A.C.,Deal, M.S.,Steichen, J.M.,Keshwani, M.M.,Guo, Y.,Taylor, S.S. Role of N-terminal myristylation in the structure and regulation of cAMP-dependent protein kinase. J.Mol.Biol. 2012 422 215 229 4DFZ 22617327 Crystal structure of myristoylated K7C catalytic subunit of cAMP-dependent protein kinase in complex with SP20 2012-01-24 2012-06-06 Bastidas, A.C.,Deal, M.S.,Steichen, J.M.,Keshwani, M.M.,Guo, Y.,Taylor, S.S. Role of N-terminal myristylation in the structure and regulation of cAMP-dependent protein kinase. J.Mol.Biol. 2012 422 215 229 4DG0 22617327 Crystal structure of myristoylated WT catalytic subunit of cAMP-dependent protein kinase in complex with SP20 and AMP-PNP 2012-01-24 2012-06-06 Bastidas, A.C.,Deal, M.S.,Steichen, J.M.,Keshwani, M.M.,Guo, Y.,Taylor, S.S. Role of N-terminal myristylation in the structure and regulation of cAMP-dependent protein kinase. J.Mol.Biol. 2012 422 215 229 4DG2 22617327 Crystal structure of myristoylated WT catalytic subunit of cAMP-dependent protein kinase in complex with SP20 2012-01-24 2012-06-06 Bastidas, A.C.,Deal, M.S.,Steichen, J.M.,Keshwani, M.M.,Guo, Y.,Taylor, S.S. Role of N-terminal myristylation in the structure and regulation of cAMP-dependent protein kinase. J.Mol.Biol. 2012 422 215 229 4F3L 22653727 Crystal Structure of the Heterodimeric CLOCK:BMAL1 Transcriptional Activator Complex 2012-05-09 2012-06-06 Huang, N.,Chelliah, Y.,Shan, Y.,Taylor, C.A.,Yoo, S.H.,Partch, C.,Green, C.B.,Zhang, H.,Takahashi, J.S. Crystal structure of the heterodimeric CLOCK:BMAL1 transcriptional activator complex. Science 2012 337 189 194 3S2E Crystal Structure of FurX NADH Complex 1 2011-05-16 2012-06-13 Hayes, R.,Sanchez, E.J.,Webb, B.N.,Hooper, T.,Nissen, M.S.,Li, Q.,Xun, L. Crystal Structures and furfural reduction mechanism of a bacterial zinc-dependent alcohol dehydrogenase To be Published 0 0 0 0 3S2F Crystal Structure of FurX NADH:Furfural 2011-05-16 2012-06-13 Hayes, R.,Sanchez, E.J.,Webb, B.N.,Hooper, T.,Nissen, M.S.,Li, Q.,Xun, L. Crystal structures and furfural reduction mechanism of a bacterial zinc-dependent alcohol dehydrogenase To be Published 0 0 0 0 3S2G Crystal Structure of FurX NADH+:Furfuryl alcohol I 2011-05-16 2012-06-13 Hayes, R.,Sanchez, E.J.,Webb, B.N.,Hooper, T.,Nissen, M.S.,Li, Q.,Xun, L. Crystal structures and furfural reduction mechanism of a bacterial zinc-dependent alcohol dehydrogenase To be Published 0 0 0 0 3S2I Crystal Structure of FurX NADH+:Furfuryl alcohol II 2011-05-16 2012-06-13 Hayes, R.,Sanchez, E.J.,Webb, B.N.,Hooper, T.,Nissen, M.S.,Li, Q.,Xun, L. Crystal structures and furfural reduction mechanism of a bacterial zinc-dependent alcohol dehydrogenase To be Published 0 0 0 0 4AL7 22522703 Crystal structure of the Csy4-minimal crRNA complex 2012-03-02 2012-06-13 Haurwitz, R.E.,Sternberg, S.H.,Doudna, J.A. Csy4 Relies on an Unusual Catalytic Dyad to Position and Cleave Crispr RNA. Embo J. 2012 31 2824 0 4F4J 21990344 Conversion of the enzyme guanylate kinase into a mitotic spindle orienting protein by a single mutation that inhibits gmp- induced closing 2012-05-10 2012-06-13 Johnston, C.A.,Whitney, D.S.,Volkman, B.F.,Doe, C.Q.,Prehoda, K.E. Conversion of the enzyme guanylate kinase into a mitotic-spindle orienting protein by a single mutation that inhibits GMP-induced closing. Proc.Natl.Acad.Sci.USA 2011 108 0 0 4DKA 22561373 Structure of Editosome protein 2012-02-03 2012-07-04 Park, Y.J.,Budiarto, T.,Wu, M.,Pardon, E.,Steyaert, J.,Hol, W.G. The structure of the C-terminal domain of the largest editosome interaction protein and its role in promoting RNA binding by RNA-editing ligase L2. Nucleic Acids Res. 2012 40 6966 6977 3TVT Structural basis for Discs Large interaction with Pins 2011-09-20 2012-08-08 Johnston, C.A.,Doe, C.Q.,Prehoda, K.E. Structural basis for Discs Large interaction with Pins To be Published 0 0 0 0 4GLL 23072385 Crystal structure of human UDP-xylose synthase. 2012-08-14 2012-09-05 Polizzi, S.J.,Walsh Jr., R.M.,Peeples, W.B.,Lim, J.M.,Wells, L.,Wood, Z.A. Human UDP-alpha-d-xylose Synthase and Escherichia coli ArnA Conserve a Conformational Shunt That Controls Whether Xylose or 4-Keto-Xylose Is Produced. Biochemistry 2012 51 8844 8855 4FQU 22955277 Glutathionyl-Hydroquinone Reductase PcpF of Sphingobium chlorophenolicum 2012-06-25 2012-09-12 Green, A.R.,Hayes, R.P.,Xun, L.,Kang, C. Structural understanding of the glutathione-dependent reduction mechanism of glutathionyl-hydroquinone reductases. J.Biol.Chem. 2012 287 35838 35848 4G0I 22955277 Glutathionyl-Hydroquinone Reductase, YqjG of Escherichia coli 2012-07-09 2012-09-12 Green, A.R.,Hayes, R.P.,Xun, L.,Kang, C. Structural understanding of the glutathione-dependent reduction mechanism of glutathionyl-hydroquinone reductases. J.Biol.Chem. 2012 287 35838 35848 4G0K 22955277 Glutathionyl-hydroquinone reductase, YqjG, of E.coli complexed with GS-menadione 2012-07-09 2012-09-12 Green, A.R.,Hayes, R.P.,Xun, L.,Kang, C. Structural understanding of the glutathione-dependent reduction mechanism of glutathionyl-hydroquinone reductases. J.Biol.Chem. 2012 287 35838 35848 4G0L 22955277 Glutathionyl-hydroquinone Reductase, YqjG, of E.coli complexed with GSH 2012-07-09 2012-09-12 Green, A.R.,Hayes, R.P.,Xun, L.,Kang, C. Structural understanding of the glutathione-dependent reduction mechanism of glutathionyl-hydroquinone reductases. J.Biol.Chem. 2012 287 35838 35848 4G5E 22949829 2,4,6-Trichlorophenol 4-monooxygenase 2012-07-17 2012-09-19 Hayes, R.P.,Webb, B.N.,Subramanian, A.K.,Nissen, M.,Popchock, A.,Xun, L.,Kang, C. Structural and Catalytic Differences between Two FADH(2)-Dependent Monooxygenases: 2,4,5-TCP 4-Monooxygenase (TftD) from Burkholderia cepacia AC1100 and 2,4,6-TCP 4-Monooxygenase (TcpA) from Cupriavidus necator JMP134. Int J Mol Sci 2012 13 9769 9784 3SR0 25580578 Crystal Structure of the Phosphoryl Transfer Transition State Mimic in the Adenylate Kinase: ADP/AlF4/AMP in the active site 2011-07-06 2012-10-10 Kerns, S.J.,Agafonov, R.V.,Cho, Y.J.,Pontiggia, F.,Otten, R.,Pachov, D.V.,Kutter, S.,Phung, L.A.,Murphy, P.N.,Thai, V.,Alber, T.,Hagan, M.F.,Kern, D. The energy landscape of adenylate kinase during catalysis. Nat.Struct.Mol.Biol. 2015 22 124 131 3TKJ 22891768 Crystal Structure of Human Asparaginase-like Protein 1 Thr168Ala 2011-08-26 2012-10-10 Li, W.,Cantor, J.R.,Yogesha, S.D.,Yang, S.,Chantranupong, L.,Liu, J.Q.,Agnello, G.,Georgiou, G.,Stone, E.M.,Zhang, Y. Uncoupling Intramolecular Processing and Substrate Hydrolysis in the N-Terminal Nucleophile Hydrolase hASRGL1 by Circular Permutation. Acs Chem.Biol. 2012 7 1840 1847 4GS7 23104097 Structure of the Interleukin-15 quaternary complex 2012-08-27 2012-11-07 Ring, A.M.,Lin, J.X.,Feng, D.,Mitra, S.,Rickert, M.,Bowman, G.R.,Pande, V.S.,Li, P.,Moraga, I.,Spolski, R.,Ozkan, E.,Leonard, W.J.,Garcia, K.C. Mechanistic and structural insight into the functional dichotomy between IL-2 and IL-15. Nat.Immunol. 2012 13 1187 1195 3V1W Molecular Basis for Multiple Ligand Binding of Calsequestrin and Potential Inhibition by Caffeine and Gallocatecin 2011-12-10 2012-12-12 Subramanian, A.K.,Nissen, M.N.,Lewis, K.M.,Sanchez, E.J.,Muralidharan, A.K.,Kang, C. Molecular Basis for Multiple Ligand Binding of Calsequestrin and Potential Inhibition by Caffeine and Gallocatecin To be Published 0 0 0 0 4G6U 23236156 CdiA-CT/CdiI toxin and immunity complex from Escherichia coli 2012-07-19 2012-12-12 Morse, R.P.,Nikolakakis, K.C.,Willett, J.L.,Gerrick, E.,Low, D.A.,Hayes, C.S.,Goulding, C.W. Structural basis of toxicity and immunity in contact-dependent growth inhibition (CDI) systems. Proc.Natl.Acad.Sci.USA 2012 109 21480 21485 4G6V 23236156 CdiA-CT/CdiI toxin and immunity complex from Burkholderia pseudomallei 2012-07-19 2012-12-12 Morse, R.P.,Nikolakakis, K.C.,Willett, J.L.,Gerrick, E.,Low, D.A.,Hayes, C.S.,Goulding, C.W. Structural basis of toxicity and immunity in contact-dependent growth inhibition (CDI) systems. Proc.Natl.Acad.Sci.USA 2012 109 21480 21485 4HIK 23201273 Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GGTTACGGT) 2012-10-11 2012-12-12 Dickey, T.H.,McKercher, M.A.,Wuttke, D.S. Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes. Structure 2013 21 121 132 4AN2 24900486 Crystal structures of human MEK1 with carboxamide-based allosteric inhibitor XL518 (GDC-0973), or related analogs. 2012-03-14 2012-12-19 Rice, K.D.,Aay, N.,Anand, N.K.,Blazey, C.M.,Bowles, O.J.,Bussenius, J.,Costanzo, S.,Curtis, J.K.,Defina, S.C.,Dubenko, L.,Engst, S.,Joshi, A.A.,Kennedy, A.R.,Kim, A.I.,Koltun, E.S.,Lougheed, J.C.,Manalo, J.C.L.,Martini, J.F.,Nuss, J.M.,Peto, C.J.,Tsang, T.H.,Yu, P.,Johnston, S. Novel Carboxamide-Based Allosteric Mek Inhibitors: Discovery and Optimization Efforts Toward Xl518 (Gdc-0973) Acs Med.Chem.Lett. 2012 3 416 0 4ENE 23239938 Structure of the N- and C-terminal trimmed ClC-ec1 Cl-/H+ antiporter and Fab Complex 2012-04-13 2012-12-26 Lim, H.H.,Shane, T.,Miller, C. Intracellular proton access in a cl(-)/h(+) antiporter. Plos Biol. 2012 10 0 0 4FTG 23275167 The crystal structure of an AHNAK peptide in complex with the S100A10/AnxA2 heterotetramer 2012-06-27 2013-01-02 Ozorowski, G.,Milton, S.,Luecke, H. Structure of a C-terminal AHNAK peptide in a 1:2:2 complex with S100A10 and an acetylated N-terminal peptide of annexin A2. Acta Crystallogr.,Sect.D 2013 69 92 104 4DG3 Crystal structure of R336A mutant of cAMP-dependent protein kinase with unphosphorylated turn motif. 2012-01-24 2013-02-13 Steichen, J.M.,Yang, J.,Taylor, S.S. Turn motif phosphorylation regulates processing of cAMP-dependent protein kinase To be Published 0 0 0 0 4ITR 20622875 Crystal Structure of IbpAFic2-H3717A in complex with adenylylated Cdc42 2013-01-18 2013-02-20 Xiao, J.,Worby, C.A.,Mattoo, S.,Sankaran, B.,Dixon, J.E. Structural basis of Fic-mediated adenylylation. Nat.Struct.Mol.Biol. 2010 17 1004 1010 4I6E 23503662 A vertebrate cryptochrome 2012-11-29 2013-03-13 Xing, W.,Busino, L.,Hinds, T.R.,Marionni, S.T.,Saifee, N.H.,Bush, M.F.,Pagano, M.,Zheng, N. SCFFBXL3 ubiquitin ligase targets cryptochromes at their cofactor pocket. Nature 2013 496 64 68 4I6J 23503662 A ubiquitin ligase-substrate complex 2012-11-29 2013-03-13 Xing, W.,Busino, L.,Hinds, T.R.,Marionni, S.T.,Saifee, N.H.,Bush, M.F.,Pagano, M.,Zheng, N. SCFFBXL3 ubiquitin ligase targets cryptochromes at their cofactor pocket. Nature 2013 496 64 68 4HPU 23458248 Crystal structure of the catalytic subunit of cAMP-dependent protein kinase displaying partial phosphoryl transfer of AMP-PNP onto a substrate peptide 2012-10-24 2013-03-20 Bastidas, A.C.,Deal, M.S.,Steichen, J.M.,Guo, Y.,Wu, J.,Taylor, S.S. Phosphoryl transfer by protein kinase a is captured in a crystal lattice. J.Am.Chem.Soc. 2013 135 4788 4798 3U4A From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis 2011-10-07 2013-04-10 McAndrew, R.P.,Park, J.I.,Reindl, W.,Friedland, G.D.,D'haeseleer, P.,Northen, T.,Sale, K.L.,Simmons, B.A.,Adams, P.D. From soil to structure: a novel dimeric family 3-beta--glucosidase isolated from compost using metagenomic analysis To be Published 0 0 0 0 4GDF 23545501 A Crystal Structure of SV40 Large T Antigen 2012-07-31 2013-04-10 Chang, Y.P.,Xu, M.,Machado, A.C.,Yu, X.J.,Rohs, R.,Chen, X.S. Mechanism of Origin DNA Recognition and Assembly of an Initiator-Helicase Complex by SV40 Large Tumor Antigen. Cell Rep 2013 3 1117 1127 4JG6 23540679 RSK2 CTD bound to 2-cyano-3-(1H-indazol-5-yl)acrylamide 2013-02-28 2013-04-10 Miller, R.M.,Paavilainen, V.O.,Krishnan, S.,Serafimova, I.M.,Taunton, J. Electrophilic fragment-based design of reversible covalent kinase inhibitors. J.Am.Chem.Soc. 2013 135 5298 5301 4HUZ 23489289 2,6-Dichloro-p-hydroquinone 1,2-Dioxygenase 2012-11-05 2013-04-17 Hayes, R.P.,Green, A.R.,Nissen, M.S.,Lewis, K.M.,Xun, L.,Kang, C. Structural characterization of 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA) from Sphingobium chlorophenolicum, a new type of aromatic ring-cleavage enzyme. Mol.Microbiol. 2013 88 523 536 4EN1 23633585 The 1.62A structure of a FRET-optimized Cerulean Fluorescent Protein 2012-04-12 2013-04-24 Watkins, J.L.,Kim, H.,Markwardt, M.L.,Chen, L.,Fromme, R.,Rizzo, M.A.,Wachter, R.M. The 1.6 A resolution structure of a FRET-optimized Cerulean fluorescent protein. Acta Crystallogr.,Sect.D 2013 69 767 773 4EZ1 Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with alpha-conotoxin BuIA 2012-05-02 2013-05-08 Filchakova, O.M.,Talley, T.T.,Reger, A.S.,Kim, C.,Ho, K.,Han, K.,Taylor, P.,McIntosh, J.M. Pairwise interaction of alpha-conotoxin BuIA Pro6 with the beta subunit of nicotinic acetylcholine receptor To be Published 0 0 0 0 4JYM 23613584 crystal Structure of KAI2 in complex with 3-methyl-2H-furo[2,3-c]pyran-2-one 2013-03-30 2013-05-08 Guo, Y.,Zheng, Z.,La Clair, J.J.,Chory, J.,Noel, J.P. Smoke-derived karrikin perception by the alpha/beta-hydrolase KAI2 from Arabidopsis. Proc.Natl.Acad.Sci.USA 2013 110 8284 8289 4JYP 23613584 crystal Structure of KAI2 Apo form 2013-03-31 2013-05-08 Guo, Y.,Zheng, Z.,La Clair, J.J.,Chory, J.,Noel, J.P. Smoke-derived karrikin perception by the alpha/beta-hydrolase KAI2 from Arabidopsis. Proc.Natl.Acad.Sci.USA 2013 110 8284 8289 4DKM Crystal Structure of Amphioxus GFPc1a 2012-02-03 2013-05-15 Bomati, E.K.,Haley, J.E.,Noel, J.P.,Deheyn, D.D. Fluorescent proteins in Amphioxus have strickingly different brightness, yet only few (but key) molecular differences To be Published 0 0 0 0 4DKN Crystal structure of amphioxus green fluorescent protein, GFPA1 2012-02-03 2013-05-15 Bomati, E.K.,Haley, J.E.,Noel, J.P.,Deheyn, D.D. Fluorescent proteins in Amphioxus have strickingly different brightness, yet only few (but key) molecular differences To be Published 0 0 0 0 4KE4 23624856 Elucidation of the structure and reaction mechanism of Sorghum bicolor hydroxycinnamoyltransferase and its structural relationship to other CoA-dependent transferases and synthases 2013-04-25 2013-05-15 Walker, A.M.,Hayes, R.P.,Youn, B.,Vermerris, W.,Sattler, S.E.,Kang, C. Elucidation of the structure and reaction mechanism of sorghum hydroxycinnamoyltransferase and its structural relationship to other coenzyme a-dependent transferases and synthases. Plant Physiol. 2013 162 640 651 4KEC 23624856 SbHCT-complex form 2013-04-25 2013-05-22 Walker, A.M.,Hayes, R.P.,Youn, B.,Vermerris, W.,Sattler, S.E.,Kang, C. Elucidation of the structure and reaction mechanism of sorghum hydroxycinnamoyltransferase and its structural relationship to other coenzyme a-dependent transferases and synthases. Plant Physiol. 2013 162 640 651 4KJY 23722425 Complex of high-affinity SIRP alpha variant FD6 with CD47 2013-05-04 2013-06-12 Weiskopf, K.,Ring, A.M.,Ho, C.C.,Volkmer, J.P.,Levin, A.M.,Volkmer, A.K.,Ozkan, E.,Fernhoff, N.B.,van de Rijn, M.,Weissman, I.L.,Garcia, K.C. Engineered SIRP alpha variants as immunotherapeutic adjuvants to anticancer antibodies. Science 2013 341 88 91 4JWS 23744947 Crystal structure of Cytochrome P450cam-putidaredoxin complex 2013-03-27 2013-06-19 Tripathi, S.,Li, H.,Poulos, T.L. Structural basis for effector control and redox partner recognition in cytochrome P450. Science 2013 340 1227 1230 4K9W 23746300 Complex of human CYP3A4 with a desoxyritonavir analog 2013-04-21 2013-06-19 Sevrioukova, I.F.,Poulos, T.L. Dissecting Cytochrome P450 3A4-Ligand Interactions Using Ritonavir Analogues. Biochemistry 2013 52 4474 4481 4K9X 23746300 Complex of human CYP3A4 with a desoxyritonavir analog 2013-04-21 2013-06-19 Sevrioukova, I.F.,Poulos, T.L. Dissecting Cytochrome P450 3A4-Ligand Interactions Using Ritonavir Analogues. Biochemistry 2013 52 4474 4481 4IEV 23747973 Cys-only bound Cysteine Dioxygenase at pH 8.0 in the presence of Cys 2012-12-13 2013-06-26 Driggers, C.M.,Cooley, R.B.,Sankaran, B.,Hirschberger, L.L.,Stipanuk, M.H.,Karplus, P.A. Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH. J.Mol.Biol. 2013 425 3121 3136 4IEW 23747973 Cys-only bound Cysteine Dioxygenase at pH 9.0 in the presence of Cys 2012-12-13 2013-06-26 Driggers, C.M.,Cooley, R.B.,Sankaran, B.,Hirschberger, L.L.,Stipanuk, M.H.,Karplus, P.A. Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH. J.Mol.Biol. 2013 425 3121 3136 4KQA 23754375 Crystal structure of the golgi casein kinase 2013-05-14 2013-06-26 Xiao, J.,Tagliabracci, V.S.,Wen, J.,Kim, S.A.,Dixon, J.E. Crystal structure of the Golgi casein kinase. Proc.Natl.Acad.Sci.USA 2013 110 10574 10579 4L11 23801759 Structure of the C-linker/CNBHD of agERG channels 2013-06-01 2013-06-26 Brelidze, T.I.,Gianulis, E.C.,Dimaio, F.,Trudeau, M.C.,Zagotta, W.N. Structure of the C-terminal region of an ERG channel and functional implications. Proc.Natl.Acad.Sci.USA 2013 110 11648 11653 4HJE 23836939 Crystal structure of p53 core domain in complex with DNA 2012-10-12 2013-07-17 Chen, Y.,Zhang, X.,Dantas Machado, A.C.,Ding, Y.,Chen, Z.,Qin, P.Z.,Rohs, R.,Chen, L. Structure of p53 binding to the BAX response element reveals DNA unwinding and compression to accommodate base-pair insertion. Nucleic Acids Res. 2013 41 8368 8376 4HQP Alpha7 nicotinic receptor chimera and its complex with Alpha bungarotoxin 2012-10-25 2013-07-17 Li, S.X.,Cheng, K.,Gomoto, R.,Bren, N.,Huang, S.,Sine, S.,Chen, L. Structural principles for Alpha-neurotoxin binding to and selectivity among nicotinic receptors To be Published 0 0 0 0 4JEH 23858467 Crystal Structure of Munc18a and Syntaxin1 lacking N-peptide complex 2013-02-27 2013-07-17 Colbert, K.N.,Hattendorf, D.A.,Weiss, T.M.,Burkhardt, P.,Fasshauer, D.,Weis, W.I. Syntaxin1a variants lacking an N-peptide or bearing the LE mutation bind to Munc18a in a closed conformation. Proc.Natl.Acad.Sci.USA 2013 110 12637 12642 4KK0 23857276 Crystal Structure of TSC1 core domain from S. pombe 2013-05-05 2013-07-17 Sun, W.,Zhu, Y.J.,Wang, Z.,Zhong, Q.,Gao, F.,Lou, J.,Gong, W.,Xu, W. Crystal structure of the yeast TSC1 core domain and implications for tuberous sclerosis pathological mutations. Nat Commun 2013 4 2135 2135 4KK1 23857276 Crystal Structure of TSC1 core domain from S. pombe 2013-05-05 2013-07-17 Sun, W.,Zhu, Y.J.,Wang, Z.,Zhong, Q.,Gao, F.,Lou, J.,Gong, W.,Xu, W. Crystal structure of the yeast TSC1 core domain and implications for tuberous sclerosis pathological mutations. Nat Commun 2013 4 2135 2135 4KK1 23857276 Crystal Structure of TSC1 core domain from S. pombe 2013-05-05 2013-07-17 Sun, W.,Zhu, Y.J.,Wang, Z.,Zhong, Q.,Gao, F.,Lou, J.,Gong, W.,Xu, W. Crystal structure of the yeast TSC1 core domain and implications for tuberous sclerosis pathological mutations. Nat Commun 2013 4 2135 2135 4L6G 23829586 Crystal Structure of P450cin Y81F mutant, crystallized in 7 mM 1,8-cineole 2013-06-12 2013-07-24 Madrona, Y.,Hollingsworth, S.A.,Khan, B.,Poulos, T.L. P450cin active site water: implications for substrate binding and solvent accessibility. Biochemistry 2013 52 5039 5050 4IVH Crystal structure of QKLVFFAED nonapeptide segment from amyloid beta incorporated into a macrocyclic beta-sheet template 2013-01-22 2013-07-31 Pham, J.D.,Chim, N.,Goulding, C.W.,Nowick, J.S. Structures of beta-Amyloid Peptide Oligomers J.Am.Chem.Soc. 2013 0 0 0 4LGG 23841803 Structure of 3MB-PP1 bound to analog-sensitive Src kinase 2013-06-27 2013-08-07 Zhang, C.,Lopez, M.S.,Dar, A.C.,Ladow, E.,Finkbeiner, S.,Yun, C.H.,Eck, M.J.,Shokat, K.M. Structure-guided inhibitor design expands the scope of analog-sensitive kinase technology. Acs Chem.Biol. 2013 8 1931 1938 4LGH 23841803 Crystal structure of 1NM-PP1 bound to analog-sensitive Src kinase 2013-06-27 2013-08-07 Zhang, C.,Lopez, M.S.,Dar, A.C.,Ladow, E.,Finkbeiner, S.,Yun, C.H.,Eck, M.J.,Shokat, K.M. Structure-guided inhibitor design expands the scope of analog-sensitive kinase technology. Acs Chem.Biol. 2013 8 1931 1938 4LTD 18701448 Crystal structures of NADH:FMN oxidoreductase (EMOB) - apo form 2013-07-23 2013-08-07 Nissen, M.S.,Youn, B.,Knowles, B.D.,Ballinger, J.W.,Jun, S.Y.,Belchik, S.M.,Xun, L.,Kang, C. Crystal structures of NADH:FMN oxidoreductase (EmoB) at different stages of catalysis. J.Biol.Chem. 2008 283 28710 28720 4KJQ 24036509 Structure of the CLC-ec1 deltaNC construct in 100mM fluoride 2013-05-03 2013-08-21 Lim, H.H.,Stockbridge, R.B.,Miller, C. Fluoride-dependent interruption of the transport cycle of a CLC Cl(-)/H(+) antiporter. Nat.Chem.Biol. 2013 9 721 725 4KJW 24036509 Structure of the CLC-ec1 deltaNC construct in 100mM fluoride and 20mM bromide 2013-05-03 2013-08-21 Lim, H.H.,Stockbridge, R.B.,Miller, C. Fluoride-dependent interruption of the transport cycle of a CLC Cl(-)/H(+) antiporter. Nat.Chem.Biol. 2013 9 721 725 4KK5 24036509 Structure of the CLC-ec1 deltaNC construct in 20mM fluoride and 20mM bromide 2013-05-05 2013-08-21 Lim, H.H.,Stockbridge, R.B.,Miller, C. Fluoride-dependent interruption of the transport cycle of a CLC Cl(-)/H(+) antiporter. Nat.Chem.Biol. 2013 9 721 725 4KK9 24036509 Structure of the E148A mutant of CLC-ec1 deltaNC construct in 100mM fluoride and 2mM Bromide 2013-05-05 2013-08-21 Lim, H.H.,Stockbridge, R.B.,Miller, C. Fluoride-dependent interruption of the transport cycle of a CLC Cl(-)/H(+) antiporter. Nat.Chem.Biol. 2013 9 721 725 4KKA 24036509 Structure of the E148A mutant of CLC-ec1 deltaNC construct in 100mM fluoride and 20mM Bromide 2013-05-05 2013-08-21 Lim, H.H.,Stockbridge, R.B.,Miller, C. Fluoride-dependent interruption of the transport cycle of a CLC Cl(-)/H(+) antiporter. Nat.Chem.Biol. 2013 9 721 725 4KKL 24036509 Structure of the E148A mutant of CLC-ec1 delta NC construct in 100mM fluoride 2013-05-06 2013-08-21 Lim, H.H.,Stockbridge, R.B.,Miller, C. Fluoride-dependent interruption of the transport cycle of a CLC Cl(-)/H(+) antiporter. Nat.Chem.Biol. 2013 9 721 725 4LBH 23955343 5-chloro-2-hydroxyhydroquinone dehydrochlorinase (TftG) from Burkholderia phenoliruptrix AC1100: Apo-form 2013-06-20 2013-08-28 Hayes, R.P.,Lewis, K.M.,Xun, L.,Kang, C. Catalytic Mechanism of 5-Chlorohydroxyhydroquinone Dehydrochlorinase from the YCII Superfamily of Largely Unknown Function. J.Biol.Chem. 2013 288 28447 28456 4LBP 23955343 5-chloro-2-hydroxyhydroquinone dehydrochlorinase (TftG) from Burkholderia phenoliruptrix AC1100: Complex with 2,5-dihydroxybenzoquinone 2013-06-20 2013-08-28 Hayes, R.P.,Lewis, K.M.,Xun, L.,Kang, C. Catalytic Mechanism of 5-Chlorohydroxyhydroquinone Dehydrochlorinase from the YCII Superfamily of Largely Unknown Function. J.Biol.Chem. 2013 288 28447 28456 4LLO 23975098 Structure of the eag domain-CNBHD complex of the mouse EAG1 channel 2013-07-09 2013-08-28 Haitin, Y.,Carlson, A.E.,Zagotta, W.N. The structural mechanism of KCNH-channel regulation by the eag domain. Nature 2013 501 444 448 4JV4 23978166 Crystal Structure of RIalpha(91-379) bound to HE33, a N6 di-propyl substituted cAMP analog 2013-03-25 2013-09-18 Brown, S.H.,Cheng, C.Y.,Saldanha, S.A.,Wu, J.,Cottam, H.B.,Sankaran, B.,Taylor, S.S. Implementing Fluorescence Anisotropy Screening and Crystallographic Analysis to Define PKA Isoform-Selective Activation by cAMP Analogs. Acs Chem.Biol. 2013 8 2164 2172 4MLP 24080726 Mammalian cryptochrome in complex with a small molecule competitor of its ubiquitin ligase 2013-09-06 2013-10-16 Nangle, S.,Xing, W.,Zheng, N. Crystal structure of mammalian cryptochrome in complex with a small molecule competitor of its ubiquitin ligase. Cell Res. 2013 23 1417 1419 4MMB 24121440 Crystal structure of LeuBAT (delta6 mutant) in complex with sertraline 2013-09-08 2013-10-16 Wang, H.,Goehring, A.,Wang, K.H.,Penmatsa, A.,Ressler, R.,Gouaux, E. Structural basis for action by diverse antidepressants on biogenic amine transporters. Nature 2013 503 141 145 4MMC 24121440 Crystal structure of LeuBAT (delta6 mutant) in complex with desvenlafaxine 2013-09-08 2013-10-16 Wang, H.,Goehring, A.,Wang, K.H.,Penmatsa, A.,Ressler, R.,Gouaux, E. Structural basis for action by diverse antidepressants on biogenic amine transporters. Nature 2013 503 141 145 4MMD 24121440 Crystal structure of LeuBAT (delta6 mutant) in complex with (S)-duloxetine 2013-09-08 2013-10-16 Wang, H.,Goehring, A.,Wang, K.H.,Penmatsa, A.,Ressler, R.,Gouaux, E. Structural basis for action by diverse antidepressants on biogenic amine transporters. Nature 2013 503 141 145 4MME 24121440 Crystal structure of LeuBAT (delta6 mutant) in complex with mazindol 2013-09-08 2013-10-16 Wang, H.,Goehring, A.,Wang, K.H.,Penmatsa, A.,Ressler, R.,Gouaux, E. Structural basis for action by diverse antidepressants on biogenic amine transporters. Nature 2013 503 141 145 4MMF 24121440 Crystal structure of LeuBAT (delta5 mutant) in complex with mazindol 2013-09-08 2013-10-16 Wang, H.,Goehring, A.,Wang, K.H.,Penmatsa, A.,Ressler, R.,Gouaux, E. Structural basis for action by diverse antidepressants on biogenic amine transporters. Nature 2013 503 141 145 3W8W 24162851 The crystal structure of EncM 2013-03-22 2013-10-30 Teufel, R.,Miyanaga, A.,Michaudel, Q.,Stull, F.,Louie, G.,Noel, J.P.,Baran, P.S.,Palfey, B.,Moore, B.S. Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement. Nature 2013 503 552 556 4C8Y 24150936 Cas6 (TTHA0078) substrate mimic complex 2013-10-02 2013-11-06 Niewoehner, O.,Jinek, M.,Doudna, J.A. Evolution of Crispr RNA Recognition and Processing by Cas6 Endonucleases. Nucleic Acids Res. 2014 42 1341 0 4C8Z 24150936 Cas6 (TTHA0078) product complex 2013-10-02 2013-11-06 Niewoehner, O.,Jinek, M.,Doudna, J.A. Evolution of Crispr RNA Recognition and Processing by Cas6 Endonucleases. Nucleic Acids Res. 2014 42 1341 0 4C9D 24150936 Cas6 (TTHB231) product complex 2013-10-02 2013-11-06 Niewoehner, O.,Jinek, M.,Doudna, J.A. Evolution of CRISPR RNA recognition and processing by Cas6 endonucleases. Nucleic Acids Res. 2014 42 1341 1353 4NAW 24191030 Crystal Structure of Human ATG12~ATG5-ATG16N in complex with a fragment of ATG3 2013-10-22 2013-11-06 Metlagel, Z.,Otomo, C.,Takaesu, G.,Otomo, T. Structural basis of ATG3 recognition by the autophagic ubiquitin-like protein ATG12. Proc.Natl.Acad.Sci.USA 2013 110 18844 18849 4M2O 24189072 Crystal structure of a non-myristoylated C39A recoverin mutant with one calcium ion bound to EF-hand 3 2013-08-05 2013-11-13 Ranaghan, M.J.,Kumar, R.P.,Chakrabarti, K.S.,Buosi, V.,Kern, D.,Oprian, D.D. A Highly Conserved Cysteine of Neuronal Calcium-sensing Proteins Controls Cooperative Binding of Ca2+ to Recoverin. J.Biol.Chem. 2013 288 36160 36167 4M2P 24189072 Crystal structure of a non-myristoylated C39D recoverin mutant with one calcium ion bound to EF-hand 3 2013-08-05 2013-11-13 Ranaghan, M.J.,Kumar, R.P.,Chakrabarti, K.S.,Buosi, V.,Kern, D.,Oprian, D.D. A Highly Conserved Cysteine of Neuronal Calcium-sensing Proteins Controls Cooperative Binding of Ca2+ to Recoverin. J.Biol.Chem. 2013 288 36160 36167 4M2Q 24189072 Crystal structure of non-myristoylated recoverin with Cysteine-39 oxidized to sulfenic acid 2013-08-05 2013-11-13 Ranaghan, M.J.,Kumar, R.P.,Chakrabarti, K.S.,Buosi, V.,Kern, D.,Oprian, D.D. A Highly Conserved Cysteine of Neuronal Calcium-sensing Proteins Controls Cooperative Binding of Ca2+ to Recoverin. J.Biol.Chem. 2013 288 36160 36167 4MCV 24171479 Star 12 bound to analog-sensitive Src kinase 2013-08-21 2013-11-20 Lopez, M.S.,Choy, J.W.,Peters, U.,Sos, M.L.,Morgan, D.O.,Shokat, K.M. Staurosporine-derived inhibitors broaden the scope of analog-sensitive kinase technology. J.Am.Chem.Soc. 2013 135 18153 18159 4L9W 24256730 Crystal Structure of H-Ras G12C, GMPPNP-bound 2013-06-18 2013-11-27 Ostrem, J.M.,Peters, U.,Sos, M.L.,Wells, J.A.,Shokat, K.M. K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions. Nature 2013 503 548 551 4LRW 24256730 Crystal Structure of K-Ras G12C (cysteine-light), GDP-bound 2013-07-21 2013-11-27 Ostrem, J.M.,Peters, U.,Sos, M.L.,Wells, J.A.,Shokat, K.M. K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions. Nature 2013 503 548 551 4LV6 24256730 Crystal Structure of small molecule disulfide 4 covalently bound to K-Ras G12C 2013-07-26 2013-11-27 Ostrem, J.M.,Peters, U.,Sos, M.L.,Wells, J.A.,Shokat, K.M. K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions. Nature 2013 503 548 551 4M1W 24256730 Crystal Structure of small molecule vinylsulfonamide covalently bound to K-Ras G12C 2013-08-04 2013-11-27 Ostrem, J.M.,Peters, U.,Sos, M.L.,Wells, J.A.,Shokat, K.M. K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions. Nature 2013 503 548 551 4M21 24256730 Crystal Structure of small molecule acrylamide 11 covalently bound to K-Ras G12C 2013-08-05 2013-11-27 Ostrem, J.M.,Peters, U.,Sos, M.L.,Wells, J.A.,Shokat, K.M. K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions. Nature 2013 503 548 551 4MS2 24270805 Structural basis of Ca2+ selectivity of a voltage-gated calcium channel 2013-09-18 2013-11-27 Tang, L.,Gamal El-Din, T.M.,Payandeh, J.,Martinez, G.Q.,Heard, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature 2014 505 56 61 4MTF 24270805 Structural Basis of Ca2+ Selectivity of a Voltage-gated Calcium Channel 2013-09-19 2013-11-27 Tang, L.,Gamal El-Din, T.M.,Payandeh, J.,Martinez, G.Q.,Heard, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature 2014 505 56 61 4MTG 24270805 Structural Basis for Ca2+ Selectivity of a Voltage-gated Calcium Channel 2013-09-19 2013-11-27 Tang, L.,Gamal El-Din, T.M.,Payandeh, J.,Martinez, G.Q.,Heard, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature 2014 505 56 61 4MTO 24270805 Structural Basis for Ca2+ Selectivity of a Voltage-gated Calcium Channel 2013-09-19 2013-11-27 Tang, L.,Gamal El-Din, T.M.,Payandeh, J.,Martinez, G.Q.,Heard, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature 2014 505 56 61 4MVM 24270805 Structural Basis for Ca2+ Selectivity of a Voltage-gated Calcium Channel 2013-09-24 2013-11-27 Tang, L.,Gamal El-Din, T.M.,Payandeh, J.,Martinez, G.Q.,Heard, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature 2014 505 56 61 4MVO 24270805 Structural Basis for Ca2+ Selectivity of a Voltage-gated Calcium Channel 2013-09-24 2013-11-27 Tang, L.,Gamal El-Din, T.M.,Payandeh, J.,Martinez, G.Q.,Heard, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature 2014 505 56 61 4MVQ 24270805 Structural Basis for Ca2+ Selectivity of a Voltage-gated Calcium Channel 2013-09-24 2013-11-27 Tang, L.,Gamal El-Din, T.M.,Payandeh, J.,Martinez, G.Q.,Heard, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature 2014 505 56 61 4MVR 24270805 Structural Basis for Ca2+ Selectivity of a Voltage-gated Calcium Channel 2013-09-24 2013-11-27 Tang, L.,Gamal El-Din, T.M.,Payandeh, J.,Martinez, G.Q.,Heard, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature 2014 505 56 61 4MVS 24270805 Structural Basis for Ca2+ Selectivity of a Voltage-gated Calcium Channel 2013-09-24 2013-11-27 Tang, L.,Gamal El-Din, T.M.,Payandeh, J.,Martinez, G.Q.,Heard, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature 2014 505 56 61 4MVU 24270805 Structural Basis for Ca2+ Selectivity of a Voltage-gated Calcium Channel 2013-09-24 2013-11-27 Tang, L.,Gamal El-Din, T.M.,Payandeh, J.,Martinez, G.Q.,Heard, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature 2014 505 56 61 4MVZ 24270805 Structural Basis for Ca2+ Selectivity of a Voltage-gated Calcium Channel 2013-09-24 2013-11-27 Tang, L.,Gamal El-Din, T.M.,Payandeh, J.,Martinez, G.Q.,Heard, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature 2014 505 56 61 4MW3 24270805 Structural Basis for Ca2+ Selectivity of a Voltage-gated Calcium Channel 2013-09-24 2013-11-27 Tang, L.,Gamal El-Din, T.M.,Payandeh, J.,Martinez, G.Q.,Heard, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature 2014 505 56 61 4MW8 24270805 Structural Basis for Ca2+ Selectivity of a Voltage-gated Calcium Channel 2013-09-24 2013-11-27 Tang, L.,Gamal El-Din, T.M.,Payandeh, J.,Martinez, G.Q.,Heard, T.M.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for Ca2+ selectivity of a voltage-gated calcium channel. Nature 2014 505 56 61 4NBU 24212572 Crystal structure of FabG from Bacillus sp 2013-10-23 2013-12-04 Javidpour, P.,Pereira, J.H.,Goh, E.B.,McAndrew, R.P.,Ma, S.M.,Friedland, G.D.,Keasling, J.D.,Chhabra, S.R.,Adams, P.D.,Beller, H.R. Biochemical and Structural Studies of NADH-Dependent FabG Used To Increase the Bacterial Production of Fatty Acids under Anaerobic Conditions. Appl.Environ.Microbiol. 2014 80 497 505 3W35 35985031 Crystal structure of apo-type bacterial Vanadium-dependent chloroperoxidase 2012-12-11 2013-12-11 Chen, P.Y.,Adak, S.,Chekan, J.R.,Liscombe, D.K.,Miyanaga, A.,Bernhardt, P.,Diethelm, S.,Fielding, E.N.,George, J.H.,Miles, Z.D.,Murray, L.A.M.,Steele, T.S.,Winter, J.M.,Noel, J.P.,Moore, B.S. Structural Basis of Stereospecific Vanadium-Dependent Haloperoxidase Family Enzymes in Napyradiomycin Biosynthesis. Biochemistry 2022 0 0 0 4IKR 23767698 Crystal structure of Type 1 human methionine aminopeptidase in complex with 2-(4-(5-chloro-6-methyl-2-(pyridin-2-yl)pyrimidin-4-yl)piperazin-1-yl)ethanol 2012-12-28 2013-12-11 Kishor, C.,Arya, T.,Reddi, R.,Chen, X.,Saddanapu, V.,Marapaka, A.K.,Gumpena, R.,Ma, D.,Liu, J.O.,Addlagatta, A. Identification, Biochemical and Structural Evaluation of Species-Specific Inhibitors against Type I Methionine Aminopeptidases J.Med.Chem. 2013 56 5295 5305 4NTL Crystal structure of a lipoprotein, YaeC family (EF3198) from Enterococcus faecalis V583 at 1.80 A resolution 2013-12-02 2013-12-11 Joint Center for Structural Genomics (JCSG) Crystal structure of a lipoprotein, YaeC family (EF3198) from Enterococcus faecalis V583 at 1.80 A resolution To be published 0 0 0 0 4IDY 24841365 Mycobacterium Tuberculosis Methionine aminopeptidase Type 1c in complex with 2-hydroxyethyl disulfide 2012-12-13 2013-12-18 Reddi, R.,Arya, T.,Kishor, C.,Gumpena, R.,Ganji, R.J.,Bhukya, S.,Addlagatta, A. Selective targeting of the conserved active site cysteine of Mycobacterium tuberculosis methionine aminopeptidase with electrophilic reagents Febs J. 2014 281 4240 4248 4IEC 24841365 Cys105 covalent modification by 2-hydroxyethyl disulfide in Mycobacterium tuberculosis methionine aminopeptidase Type 1c 2012-12-13 2013-12-18 Reddi, R.,Arya, T.,Kishor, C.,Gumpena, R.,Ganji, R.J.,Bhukya, S.,Addlagatta, A. Selective targeting of the conserved active site cysteine of Mycobacterium tuberculosis methionine aminopeptidase with electrophilic reagents Febs J. 2014 281 4240 4248 4IF7 24841365 Mycobacterium Tuberculosis Methionine aminopeptidase Type 1c in complex with homocysteine-methyl disulfide 2012-12-14 2013-12-18 Reddi, R.,Arya, T.,Kishor, C.,Gumpena, R.,Ganji, R.J.,Bhukya, S.,Addlagatta, A. Selective targeting of the conserved active site cysteine of Mycobacterium tuberculosis methionine aminopeptidase with electrophilic reagents Febs J. 2014 281 4240 4248 4NZJ Crystal structure of a putative alpha-galactosidase (BF1418) from Bacteroides fragilis NCTC 9343 at 1.57 A resolution 2013-12-12 2013-12-25 Joint Center for Structural Genomics (JCSG) Crystal structure of a putative alpha-galactosidase (BF1418) from Bacteroides fragilis NCTC 9343 at 1.57 A resolution To be published 0 0 0 0 4ME3 24378617 1.8 Angstrom Crystal Structure of the N-terminal Domain of an Archaeal MCM 2013-08-24 2014-01-08 Fu, Y.,Slaymaker, I.M.,Wang, J.,Wang, G.,Chen, X.S. The 1.8- angstrom Crystal Structure of the N-Terminal Domain of an Archaeal MCM as a Right-Handed Filament. J.Mol.Biol. 2014 426 1512 1523 4MX3 24316401 Crystal Structure of PKA RIalpha Homodimer 2013-09-25 2014-01-15 Bruystens, J.G.,Wu, J.,Fortezzo, A.,Kornev, A.P.,Blumenthal, D.K.,Taylor, S.S. PKA RI alpha Homodimer Structure Reveals an Intermolecular Interface with Implications for Cooperative cAMP Binding and Carney Complex Disease. Structure 2014 22 59 69 4NZK Crystal structure of a DHHW family protein (EUBSIR_00411) from Eubacterium siraeum DSM 15702 at 1.49 A resolution 2013-12-12 2014-01-15 Joint Center for Structural Genomics (JCSG) Crystal structure of a hypothetical protein (EUBSIR_00411) from Eubacterium siraeum DSM 15702 at 1.49 A resolution To be published 0 0 0 0 4N9Y 24465839 Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E748Q 2013-10-21 2014-01-29 Wang, Z.,Gagne, J.P.,Poirier, G.G.,Xu, W. Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase. Plos One 2014 9 0 0 4N9Z 24465839 Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E749Q 2013-10-21 2014-01-29 Wang, Z.,Gagne, J.P.,Poirier, G.G.,Xu, W. Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase. Plos One 2014 9 0 0 4NA0 24465839 Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain with ADPRibose 2013-10-21 2014-01-29 Wang, Z.,Gagne, J.P.,Poirier, G.G.,Xu, W. Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase. Plos One 2014 9 0 0 4NA4 24465839 Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain with ADP-HPD 2013-10-21 2014-01-29 Wang, Z.,Gagne, J.P.,Poirier, G.G.,Xu, W. Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase. Plos One 2014 9 0 0 4NA5 24465839 Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E748N 2013-10-21 2014-01-29 Wang, Z.,Gagne, J.P.,Poirier, G.G.,Xu, W. Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase. Plos One 2014 9 0 0 4NA6 24465839 Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E749N 2013-10-21 2014-01-29 Wang, Z.,Gagne, J.P.,Poirier, G.G.,Xu, W. Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase. Plos One 2014 9 0 0 4OGZ Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution 2014-01-16 2014-02-05 Joint Center for Structural Genomics (JCSG) Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution To be published 0 0 0 0 4MS9 24516151 Native RNA-10mer Structure: ccggcgccgg 2013-09-18 2014-02-12 Sheng, J.,Li, L.,Engelhart, A.E.,Gan, J.,Wang, J.,Szostak, J.W. Structural insights into the effects of 2'-5' linkages on the RNA duplex. Proc.Natl.Acad.Sci.USA 2014 111 3050 3055 4MSB 24516151 RNA 10mer duplex with two 2'-5'-linkages 2013-09-18 2014-02-12 Sheng, J.,Li, L.,Engelhart, A.E.,Gan, J.,Wang, J.,Szostak, J.W. Structural insights into the effects of 2'-5' linkages on the RNA duplex. Proc.Natl.Acad.Sci.USA 2014 111 3050 3055 4MSR 24516151 RNA 10mer duplex with six 2'-5'-linkages 2013-09-18 2014-02-12 Sheng, J.,Li, L.,Engelhart, A.E.,Gan, J.,Wang, J.,Szostak, J.W. Structural insights into the effects of 2'-5' linkages on the RNA duplex. Proc.Natl.Acad.Sci.USA 2014 111 3050 3055 4CAQ 24472039 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-((3-Chlorophenethylamino)ethyl)quinolin-2-amine 2013-10-08 2014-02-19 Cinelli, M.A.,Li, H.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Simplified 2-Aminoquinoline-Based Scaffold for Potent and Selective Neuronal Nitric Oxide Synthase Inhibition. J.Med.Chem. 2014 57 1513 0 4CFT 24472039 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 7-((3-Fluorophenethylamino)ethyl)quinolin-2-amine 2013-11-19 2014-02-19 Cinelli, M.A.,Li, H.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Simplified 2-Aminoquinoline-Based Scaffold for Potent and Selective Neuronal Nitric Oxide Synthase Inhibition. J.Med.Chem. 2014 57 1513 0 4OF0 24485456 Crystal Structure of SYG-1 D1-D2, refolded 2014-01-14 2014-02-19 Ozkan, E.,Chia, P.H.,Wang, R.R.,Goriatcheva, N.,Borek, D.,Otwinowski, Z.,Walz, T.,Shen, K.,Garcia, K.C. Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis. Cell(Cambridge,Mass.) 2014 156 482 494 4OF7 24485456 Crystal Structure of SYG-1 D1, Crystal Form 2 2014-01-14 2014-02-19 Ozkan, E.,Chia, P.H.,Wang, R.R.,Goriatcheva, N.,Borek, D.,Otwinowski, Z.,Walz, T.,Shen, K.,Garcia, K.C. Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis. Cell(Cambridge,Mass.) 2014 156 482 494 4LZI 24363310 Characterization of Solanum tuberosum Multicystatin and Significance of Core Domains 2013-07-31 2014-02-26 Green, A.R.,Nissen, M.S.,Kumar, G.N.,Knowles, N.R.,Kang, C. Characterization of Solanum tuberosum Multicystatin and the Significance of Core Domains. Plant Cell 2013 25 5043 5052 4OH3 24572362 Crystal structure of a nitrate transporter 2014-01-16 2014-03-05 Sun, J.,Bankston, J.R.,Payandeh, J.,Hinds, T.R.,Zagotta, W.N.,Zheng, N. Crystal structure of the plant dual-affinity nitrate transporter NRT1.1. Nature 2014 507 73 77 4PPY Crystal structure of a putative acylhydrolase (BF3764) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution 2014-02-27 2014-04-02 Joint Center for Structural Genomics (JCSG) Crystal structure of a putative acylhydrolase (BF3764) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution To be published 0 0 0 0 4N8K 24699651 E249A mutant, RipA structure 2013-10-17 2014-04-09 Torres, R.,Lan, B.,Latif, Y.,Chim, N.,Goulding, C.W. Structural snapshots along the reaction pathway of Yersinia pestis RipA, a putative butyryl-CoA transferase. Acta Crystallogr.,Sect.D 2014 70 1074 1085 4JZK Crystal Structure of Adenylate kinase of E. Coli with ADP/AMP bound 2013-04-03 2014-04-30 Cho, Y.-J.,Agafonov, R.,Kern, D. Crystal structure of E. Coli Adenylate kinase with ADP and AMP bound To be Published 0 0 0 0 4MW1 24743796 Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-{3-[(3-chloro-5-methoxybenzyl)amino]propyl}-3-thiophen-3-ylurea (Chem 1444) 2013-09-24 2014-04-30 Koh, C.Y.,Kim, J.E.,Wetzel, A.B.,de van der Schueren, W.J.,Shibata, S.,Ranade, R.M.,Liu, J.,Zhang, Z.,Gillespie, J.R.,Buckner, F.S.,Verlinde, C.L.,Fan, E.,Hol, W.G. Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness. Plos Negl Trop Dis 2014 8 0 0 4CTZ 24758147 Structure of bovine endothelial nitric oxide synthase heme domain in complex with (S)-6-(2-amino-2-(3-(2-(4-methylpyridin-2-yl)ethyl)phenyl)ethyl)-4-methylpyridin-2-amine 2014-03-15 2014-05-07 Kang, S.,Tang, W.,Li, H.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Nitric Oxide Synthase Inhibitors that Interact with Both a Heme Propionate and Tetrahydrobiopterin Show High Isoform Selectivity. J.Med.Chem. 2014 57 4382 0 4CU0 24758147 Structure of bovine endothelial nitric oxide synthase heme domain in complex with (R)-6-(3-amino-2-(5-(2-(6-amino-4-methylpyridin-2-yl) ethyl)pyridin-3-yl)propyl)-4-methylpyridin-2-amine 2014-03-15 2014-05-07 Kang, S.,Tang, W.,Li, H.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Nitric Oxide Synthase Inhibitors that Interact with Both a Heme Propionate and Tetrahydrobiopterin Show High Isoform Selectivity. J.Med.Chem. 2014 57 4382 0 4CU1 24758147 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 6-[(2S)-3-amino-2-{5-[2-(6-amino-4-methylpyridin-2-yl)ethyl]pyridin-3-yl}propyl]-4-methylpyridin-2-amine 2014-03-15 2014-05-07 Kang, S.,Tang, W.,Li, H.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Nitric Oxide Synthase Inhibitors that Interact with Both a Heme Propionate and Tetrahydrobiopterin Show High Isoform Selectivity. J.Med.Chem. 2014 57 4382 0 4JL6 25580578 Crystal Structure of Adenylate kinase with 2 ADP's 2013-03-12 2014-06-25 Kerns, S.J.,Agafonov, R.V.,Cho, Y.J.,Pontiggia, F.,Otten, R.,Pachov, D.V.,Kutter, S.,Phung, L.A.,Murphy, P.N.,Thai, V.,Alber, T.,Hagan, M.F.,Kern, D. The energy landscape of adenylate kinase during catalysis. Nat.Struct.Mol.Biol. 2015 22 124 131 4JLB 25580578 Crystal Structures of Adenylate kinase with 2ADP's 2013-03-12 2014-06-25 Kerns, S.J.,Agafonov, R.V.,Cho, Y.J.,Pontiggia, F.,Otten, R.,Pachov, D.V.,Kutter, S.,Phung, L.A.,Murphy, P.N.,Thai, V.,Alber, T.,Hagan, M.F.,Kern, D. The energy landscape of adenylate kinase during catalysis. Nat.Struct.Mol.Biol. 2015 22 124 131 4JLD 25580578 Crystal Structures of adenylate kinase with 2 ADP's 2013-03-12 2014-06-25 Kerns, S.J.,Agafonov, R.V.,Cho, Y.J.,Pontiggia, F.,Otten, R.,Pachov, D.V.,Kutter, S.,Phung, L.A.,Murphy, P.N.,Thai, V.,Alber, T.,Hagan, M.F.,Kern, D. The energy landscape of adenylate kinase during catalysis. Nat.Struct.Mol.Biol. 2015 22 124 131 4JLO 25580578 Crystal structure of Aquifex adenylate kinase R150K mutant 2013-03-12 2014-06-25 Kerns, S.J.,Agafonov, R.V.,Cho, Y.J.,Pontiggia, F.,Otten, R.,Pachov, D.V.,Kutter, S.,Phung, L.A.,Murphy, P.N.,Thai, V.,Alber, T.,Hagan, M.F.,Kern, D. The energy landscape of adenylate kinase during catalysis. Nat.Struct.Mol.Biol. 2015 22 124 131 4JLP 25580578 Crystal structure of R150K aquifex adenylate kinase mutant 2013-03-12 2014-06-25 Kerns, S.J.,Agafonov, R.V.,Cho, Y.J.,Pontiggia, F.,Otten, R.,Pachov, D.V.,Kutter, S.,Phung, L.A.,Murphy, P.N.,Thai, V.,Alber, T.,Hagan, M.F.,Kern, D. The energy landscape of adenylate kinase during catalysis. Nat.Struct.Mol.Biol. 2015 22 124 131 4LF1 24942737 Hexameric Form II RuBisCO from Rhodopseudomonas palustris, activated and complexed with 2-CABP 2013-06-26 2014-06-25 Satagopan, S.,Chan, S.,Perry, L.J.,Tabita, F.R. Structure-function studies with the unique hexameric form II ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Rhodopseudomonas palustris. J.Biol.Chem. 2014 289 21433 21450 4LF2 24942737 Hexameric Form II RuBisCO from Rhodopseudomonas palustris, activated and complexed with sulfate and magnesium 2013-06-26 2014-06-25 Satagopan, S.,Chan, S.,Perry, L.J.,Tabita, F.R. Structure-function studies with the unique hexameric form II ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Rhodopseudomonas palustris. J.Biol.Chem. 2014 289 21433 21450 4NL5 24901029 Mycobacterium tuberculosis heme-degrading protein MhuD in complex with heme and cyanide 2013-11-13 2014-06-25 Graves, A.B.,Morse, R.P.,Chao, A.,Iniguez, A.,Goulding, C.W.,Liptak, M.D. Crystallographic and Spectroscopic Insights into Heme Degradation by Mycobacterium tuberculosis MhuD. Inorg.Chem. 2014 53 5931 5940 4IKE Crystal Structure of a partly open ATP-lid of liganded Adenylate kinase 2012-12-26 2014-07-02 Cho, Y.-J.,Kern, D. The ATP-Lid Opened Adenylate Kinase with Fully Occupied Substrates To be Published 0 0 0 0 4PGG 24948836 Caffeic acid O-methyltransferase from Sorghum bicolor 2014-05-01 2014-07-02 Green, A.R.,Lewis, K.M.,Barr, J.T.,Jones, J.P.,Lu, F.,Ralph, J.,Vermerris, W.,Sattler, S.E.,Kang, C. Determination of the Structure and Catalytic Mechanism of Sorghum bicolor Caffeic Acid O-Methyltransferase and the Structural Impact of Three brown midrib12 Mutations. Plant Physiol. 2014 165 1440 1456 4PGH 24948836 Caffeic acid O-methyltransferase from Sorghum bicolor 2014-05-02 2014-07-02 Green, A.R.,Lewis, K.M.,Barr, J.T.,Jones, J.P.,Lu, F.,Ralph, J.,Vermerris, W.,Sattler, S.E.,Kang, C. Determination of the Structure and Catalytic Mechanism of Sorghum bicolor Caffeic Acid O-Methyltransferase and the Structural Impact of Three brown midrib12 Mutations. Plant Physiol. 2014 165 1440 1456 4TLL 25008524 Crystal structure of GluN1/GluN2B NMDA receptor, structure 1 2014-05-30 2014-07-02 Lee, C.H.,Lu, W.,Michel, J.C.,Goehring, A.,Du, J.,Song, X.,Gouaux, E. NMDA receptor structures reveal subunit arrangement and pore architecture. Nature 2014 511 191 197 4TLM 25008524 Crystal structure of GluN1/GluN2B NMDA receptor, structure 2 2014-05-30 2014-07-02 Lee, C.H.,Lu, W.,Michel, J.C.,Goehring, A.,Du, J.,Song, X.,Gouaux, E. NMDA receptor structures reveal subunit arrangement and pore architecture. Nature 2014 511 191 197 4OPC 24954619 Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. 2014-02-05 2014-07-09 Kung, Y.,McAndrew, R.P.,Xie, X.,Liu, C.C.,Pereira, J.H.,Adams, P.D.,Keasling, J.D. Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. Structure 2014 22 1028 1036 4OPD 24954619 Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. 2014-02-05 2014-07-09 Kung, Y.,McAndrew, R.P.,Xie, X.,Liu, C.C.,Pereira, J.H.,Adams, P.D.,Keasling, J.D. Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. Structure 2014 22 1028 1036 4V4G 15502846 Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y. 2004-10-06 2014-07-09 Vila-Sanjurjo, A.,Schuwirth, B.S.,Hau, C.W.,Cate, J.H. Structural basis for the control of translation initiation during stress. Nat.Struct.Mol.Biol. 2004 11 1054 1059 4QJL 24963544 Crystal structure of M. ulcerans phosphopantetheinyl transferase MuPPT 2014-06-04 2014-07-16 Vickery, C.R.,Kosa, N.M.,Casavant, E.P.,Duan, S.,Noel, J.P.,Burkart, M.D. Structure, biochemistry, and inhibition of essential 4'-phosphopantetheinyl transferases from two species of mycobacteria. Acs Chem.Biol. 2014 9 1939 1944 4Q6Y 25036289 Crystal structure of a chemoenzymatic glycoengineered disialylated Fc (di-sFc) 2014-04-23 2014-07-23 Ahmed, A.A.,Giddens, J.,Pincetic, A.,Lomino, J.V.,Ravetch, J.V.,Wang, L.X.,Bjorkman, P.J. Structural characterization of anti-inflammatory immunoglobulin g fc proteins. J.Mol.Biol. 2014 426 3166 3179 4Q3J 25040221 Crystal structure of NFkB-p65-degrading zinc protease family protein 2014-04-11 2014-07-30 Turco, M.M.,Sousa, M.C. The Structure and Specificity of the Type III Secretion System Effector NleC Suggest a DNA Mimicry Mechanism of Substrate Recognition. Biochemistry 2014 53 5131 5139 4TZU Crystal Structure of Murine Cereblon in Complex with Pomalidomide 2014-07-10 2014-08-06 Chamberlain, P.P.,Wang, M.,Riley, M.,Delker, S.,Ito, T.,Hideki, A.,Mori, T.,Handa, H.,Hakoshima, T.,Daniel, T.O.,Cathers, B.E.,Lopez-Girona, A.,Miller, K.,Carmel, G.,Pagarigan, B.,Leon, B.,Rychak, E.,Corral, L.,Ren, Y. Structural Basis for Responsiveness to Thalidomide-Analog Drugs Defined by the Crystal Structure of the Human Cereblon:DDB1:Lenalidomide Complex to be published 0 0 0 0 4UPM 25149509 Structure of rat neuronal nitric oxide synthase heme domain in complex with N',N'-{[(2R)-3-aminopropane-1,2-diyl]bis(oxymethanediylbenzene-3,1-diyl)}dithiophene-2-carboximidamide 2014-06-17 2014-08-20 Jing, Q.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Combination of Chiral Linkers with Thiophenecarboximidamide Heads to Improve the Selectivity of Inhibitors of Neuronal Nitric Oxide Synthase. Bioorg.Med.Chem.Lett. 2014 24 4504 0 4UPN 25149509 Structure of rat neuronal nitric oxide synthase heme domain in complex with N,N''-{[(2S)-3-aminopropane-1,2-diyl]bis(oxymethanediylbenzene-3,1-diyl)}dithiophene-2-carboximidamide 2014-06-17 2014-08-20 Jing, Q.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Combination of Chiral Linkers with Thiophenecarboximidamide Heads to Improve the Selectivity of Inhibitors of Neuronal Nitric Oxide Synthase. Bioorg.Med.Chem.Lett. 2014 24 4504 0 4JNU 26316600 Crystal structure of the human Nup57CCS3* coiled-coil segment, space group P21 2013-03-15 2014-09-17 Stuwe, T.,Bley, C.J.,Thierbach, K.,Petrovic, S.,Schilbach, S.,Mayo, D.J.,Perriches, T.,Rundlet, E.J.,Jeon, Y.E.,Collins, L.N.,Huber, F.M.,Lin, D.H.,Paduch, M.,Koide, A.,Lu, V.,Fischer, J.,Hurt, E.,Koide, S.,Kossiakoff, A.A.,Hoelz, A. Architecture of the fungal nuclear pore inner ring complex. Science 2015 350 56 64 4UQS 25194416 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 3-Bromo-7-Nitroindazole 2014-06-24 2014-09-17 Holden, J.K.,Lim, N.,Poulos, T.L. Identification of Redox Partners and Development of a Novel Chimeric Bacterial Nitric Oxide Synthase for Structure Activity Analyses. J.Biol.Chem. 2014 289 29437 0 4JQ5 26316600 Crystal structure of the human Nup49CCS2+3* coiled-coil segment 2013-03-20 2014-09-24 Stuwe, T.,Bley, C.J.,Thierbach, K.,Petrovic, S.,Schilbach, S.,Mayo, D.J.,Perriches, T.,Rundlet, E.J.,Jeon, Y.E.,Collins, L.N.,Huber, F.M.,Lin, D.H.,Paduch, M.,Koide, A.,Lu, V.,Fischer, J.,Hurt, E.,Koide, S.,Kossiakoff, A.A.,Hoelz, A. Architecture of the fungal nuclear pore inner ring complex. Science 2015 350 56 64 4U8H 25127877 Crystal Structure of Mammalian Period-Cryptochrome Complex 2014-08-03 2014-10-01 Nangle, S.N.,Rosensweig, C.,Koike, N.,Tei, H.,Takahashi, J.S.,Green, C.B.,Zheng, N. Molecular assembly of the period-cryptochrome circadian transcriptional repressor complex. Elife 2014 3 0 0 4U99 25253889 Crystal structure of an H-NOX protein from S. oneidensis in the Fe(II) ligation state, Q154A/Q155A/K156A mutant 2014-08-05 2014-10-01 Herzik, M.A.,Jonnalagadda, R.,Kuriyan, J.,Marletta, M.A. Structural insights into the role of iron-histidine bond cleavage in nitric oxide-induced activation of H-NOX gas sensor proteins. Proc.Natl.Acad.Sci.USA 2014 111 0 0 4U9B 25253889 Crystal structure of an H-NOX protein from S. oneidensis in the Fe(II)NO ligation state 2014-08-05 2014-10-01 Herzik, M.A.,Jonnalagadda, R.,Kuriyan, J.,Marletta, M.A. Structural insights into the role of iron-histidine bond cleavage in nitric oxide-induced activation of H-NOX gas sensor proteins. Proc.Natl.Acad.Sci.USA 2014 111 0 0 4U9G 25253889 Crystal structure of an H-NOX protein from S. oneidensis in the Fe(II)CO ligation state, Q154A/Q155A/K156A mutant 2014-08-06 2014-10-01 Herzik, M.A.,Jonnalagadda, R.,Kuriyan, J.,Marletta, M.A. Structural insights into the role of iron-histidine bond cleavage in nitric oxide-induced activation of H-NOX gas sensor proteins. Proc.Natl.Acad.Sci.USA 2014 111 0 0 4U9J 25253889 Crystal structure of an H-NOX protein from S. oneidensis in the Mn(II) ligation state, Q154A/Q155A/K156A mutant 2014-08-06 2014-10-01 Herzik, M.A.,Jonnalagadda, R.,Kuriyan, J.,Marletta, M.A. Structural insights into the role of iron-histidine bond cleavage in nitric oxide-induced activation of H-NOX gas sensor proteins. Proc.Natl.Acad.Sci.USA 2014 111 0 0 4U9K 25253889 Crystal structure of an H-NOX protein from S. oneidensis in the Mn(II)NO ligation state, Q154A/Q155A/K156A mutant 2014-08-06 2014-10-01 Herzik, M.A.,Jonnalagadda, R.,Kuriyan, J.,Marletta, M.A. Structural insights into the role of iron-histidine bond cleavage in nitric oxide-induced activation of H-NOX gas sensor proteins. Proc.Natl.Acad.Sci.USA 2014 111 0 0 4D1O 25286850 Structure of human endothelial nitric oxide synthase heme domain with L-Arg bound 2014-05-02 2014-10-15 Li, H.,Jamal, J.,Plaza, C.,Pineda, S.H.,Chreifi, G.,Jing, Q.,Cinelli, M.A.,Silverman, R.B.,Poulos, T.L. Structures of Human Constitutive Nitric Oxide Synthases Acta Crystallogr.,Sect.D 2014 70 2667 0 4D1P 25286850 Structure of human endothelial nitric oxide synthase heme domain IN COMPLEX WITH 6-((((3S, 5R)-5-(((6-AMINO-4-METHYLPYRIDIN-2-YL)METHOXY) METHYL)PYRROLIDIN-3-YL)OXY) METHYL)-4-METHYLPYRIDIN-2-AMINE 2014-05-02 2014-10-15 Li, H.,Jamal, J.,Plaza, C.,Pineda, S.H.,Chreifi, G.,Jing, Q.,Cinelli, M.A.,Silverman, R.B.,Poulos, T.L. Structures of Human Constitutive Nitric Oxide Synthases Acta Crystallogr.,Sect.D 2014 70 2667 0 4NTS 25077557 Apo structure of the catalytic subunit of cAMP-dependent protein kinase 2013-12-02 2014-10-15 Bastidas, A.C.,Wu, J.,Taylor, S.S. Molecular Features of Product Release for the PKA Catalytic Cycle. Biochemistry 2015 54 2 10 4NTT 25077557 Structure of the catalytic subunit of cAMP-dependent protein kinase bound to ADP and one magnesium ion 2013-12-02 2014-10-15 Bastidas, A.C.,Wu, J.,Taylor, S.S. Molecular Features of Product Release for the PKA Catalytic Cycle. Biochemistry 2015 54 2 10 4QPL 25327252 Crystal structure of RNF146(RING-WWE)/UbcH5a/iso-ADPr complex 2014-06-23 2014-10-15 DaRosa, P.A.,Wang, Z.,Jiang, X.,Pruneda, J.N.,Cong, F.,Klevit, R.E.,Xu, W. Allosteric activation of the RNF146 ubiquitin ligase by a poly(ADP-ribosyl)ation signal. Nature 2015 517 223 226 4M8T 25344815 RSK2 T493M C-Terminal Kinase Domain in complex with 3-(3-(1H-pyrazol-4-yl)phenyl)-2-cyanoacrylamide 2013-08-13 2014-10-22 London, N.,Miller, R.M.,Krishnan, S.,Uchida, K.,Irwin, J.J.,Eidam, O.,Gibold, L.,Cimermancic, P.,Bonnet, R.,Shoichet, B.K.,Taunton, J. Covalent docking of large libraries for the discovery of chemical probes. Nat.Chem.Biol. 2014 10 1066 1072 4MAO 25153195 RSK2 T493M C-Terminal Kinase Domain in Complex with RMM58 2013-08-16 2014-10-22 Krishnan, S.,Miller, R.M.,Tian, B.,Mullins, R.D.,Jacobson, M.P.,Taunton, J. Design of reversible, cysteine-targeted Michael acceptors guided by kinetic and computational analysis. J.Am.Chem.Soc. 2014 136 12624 12630 4PRF 25326328 A Second Look at the HDV Ribozyme Structure and Dynamics. 2014-03-05 2014-10-29 Kapral, G.J.,Jain, S.,Noeske, J.,Doudna, J.A.,Richardson, D.C.,Richardson, J.S. New tools provide a second look at HDV ribozyme structure, dynamics and cleavage. Nucleic Acids Res. 2014 42 12833 12846 4TZM 25446517 C. elegans HTP-2 bound to HTP-3 closure motif 1 2014-07-10 2014-11-19 Kim, Y.,Rosenberg, S.C.,Kugel, C.L.,Kostow, N.,Rog, O.,Davydov, V.,Su, T.Y.,Dernburg, A.F.,Corbett, K.D. The Chromosome Axis Controls Meiotic Events through a Hierarchical Assembly of HORMA Domain Proteins. Dev.Cell 2014 31 487 502 4RNS 25397598 PcpR inducer binding domain (apo-form) 2014-10-25 2014-11-26 Hayes, R.P.,Moural, T.W.,Lewis, K.M.,Onofrei, D.,Xun, L.,Kang, C. Structures of the Inducer-Binding Domain of Pentachlorophenol-Degrading Gene Regulator PcpR from Sphingobium chlorophenolicum. Int J Mol Sci 2014 15 20736 20752 4RPN 25397598 PcpR inducer binding domain complex with pentachlorophenol 2014-10-30 2014-11-26 Hayes, R.P.,Moural, T.W.,Lewis, K.M.,Onofrei, D.,Xun, L.,Kang, C. Structures of the Inducer-Binding Domain of Pentachlorophenol-Degrading Gene Regulator PcpR from Sphingobium chlorophenolicum. Int J Mol Sci 2014 15 20736 20752 4RPO 25397598 PcpR inducer binding domain (Complex with 2,4,6-trichlorophenol) 2014-10-30 2014-11-26 Hayes, R.P.,Moural, T.W.,Lewis, K.M.,Onofrei, D.,Xun, L.,Kang, C. Structures of the Inducer-Binding Domain of Pentachlorophenol-Degrading Gene Regulator PcpR from Sphingobium chlorophenolicum. Int J Mol Sci 2014 15 20736 20752 4CF7 25580578 Crystal structure of adenylate kinase from Aquifex aeolicus with MgADP bound 2013-11-13 2014-12-03 Kerns, S.J.,Agafonov, R.V.,Cho, Y.,Pontiggia, F.,Otten, R.,Pachov, D.V.,Kutter, S.,Phung, L.A.,Murphy, P.N.,Thai, V.,Alber, T.,Hagan, M.F.,Kern, D. The Energy Landscape of Adenylate Kinase During Catalysis. Nat.Struct.Mol.Biol. 2015 22 124 0 4RGW 25412659 Crystal Structure of a TAF1-TAF7 Complex in Human Transcription Factor IID 2014-09-30 2014-12-03 Wang, H.,Curran, E.C.,Hinds, T.R.,Wang, E.H.,Zheng, N. Crystal structure of a TAF1-TAF7 complex in human transcription factor IID reveals a promoter binding module. Cell Res. 2014 24 1433 1444 4D2Y 25489882 Structure of rat neuronal nitric oxide synthase heme domain in complex with (1R,2R)-2-(3-fluorobenzyl)-N-{2-[2-(1H-imidazol-1-yl)pyrimidin-4-yl]ethyl}cyclopropanamine 2014-10-20 2014-12-24 Mukherjee, P.,Li, H.,Sevrioukova, I.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Novel 2,4-Disubstituted Pyrimidines as Potent, Selective, and Cell-Permeable Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 1067 0 4D2Z 25489882 Structure of rat neuronal nitric oxide synthase heme domain in complex with (1S,2S)-2-(3-fluorobenzyl)-N-{2-[2-(1H-imidazol-1-YL)pyrimidin-4-YL]ethyl}cyclopropanamine 2014-10-20 2014-12-24 Mukherjee, P.,Li, H.,Sevrioukova, I.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Novel 2,4-Disubstituted Pyrimidines as Potent, Selective, and Cell-Permeable Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 1067 0 4D33 25489882 Structure of bovine endothelial nitric oxide synthase heme domain in complex with (N1-(2-(1H-imidazol-1-yl)pyrimidin-4-yl)-N2-(3- fluorophenethyl)ethane-1,2-diamine 2014-10-20 2014-12-24 Mukherjee, P.,Li, H.,Sevrioukova, I.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Novel 2,4-Disubstituted Pyrimidines as Potent, Selective, and Cell-Permeable Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 1067 0 4UCH 25489882 Structure of human nNOS R354A G357D mutant heme domain in complex with 3-(((2-((2-(1H-IMIDAZOL-1-YL)PYRIMIDIN-4-YL)ETHYL)AMINO)METHYL) BENZONITRILE 2014-12-03 2014-12-24 Mukherjee, P.,Li, H.,Sevrioukova, I.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Novel 2,4-Disubstituted Pyrimidines as Potent, Selective, and Cell-Permeable Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 1067 0 4WWR 25535373 Crystal Structure of Bag6-Ubl4A Dimerization Domain 2014-11-12 2014-12-24 Mock, J.Y.,Chartron, J.W.,Zaslaver, M.,Xu, Y.,Ye, Y.,Clemons, W.M. Bag6 complex contains a minimal tail-anchor-targeting module and a mock BAG domain. Proc.Natl.Acad.Sci.USA 2015 112 106 111 4WZA 25522159 Asymmetric Nucleotide Binding in the Nitrogenase Complex 2014-11-19 2014-12-31 Tezcan, F.A.,Kaiser, J.T.,Howard, J.B.,Rees, D.C. Structural evidence for asymmetrical nucleotide interactions in nitrogenase. J.Am.Chem.Soc. 2015 137 146 149 4D3N 25522110 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 3-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)-5-((2-(pyridin-2-yl)ethyl)amino)benzonitrile 2014-10-23 2015-01-14 Holden, J.K.,Kang, S.,Hollingsworth, S.A.,Li, H.,Lim, N.,Chen, S.,Huang, H.,Xue, F.,Tang, W.,Silverman, R.B.,Poulos, T.L. Structure-based design of bacterial nitric oxide synthase inhibitors. J. Med. Chem. 2015 58 994 1004 4D3O 25522110 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 6-(3-(2-(1H-Pyrrolo(2,3-b)pyridin-6-yl)ethyl)-5-(aminomethyl) phenethyl)-4-methylpyridin-2-amine 2014-10-23 2015-01-14 Holden, J.K.,Kang, S.,Hollingsworth, S.A.,Li, H.,Lim, N.,Chen, S.,Huang, H.,Xue, F.,Tang, W.,Silverman, R.B.,Poulos, T.L. Structure-Based Design of Bacterial Nitric Oxide Synthase Inhibitors. J.Med.Chem. 2015 58 994 0 4WK8 25567984 FOXP3 forms a domain-swapped dimer to bridge DNA 2014-10-01 2015-01-21 Chen, Y.,Chen, C.,Zhang, Z.,Liu, C.C.,Johnson, M.E.,Espinoza, C.A.,Edsall, L.E.,Ren, B.,Zhou, X.J.,Grant, S.F.,Wells, A.D.,Chen, L. DNA binding by FOXP3 domain-swapped dimer suggests mechanisms of long-range chromosomal interactions. Nucleic Acids Res. 2015 43 1268 1282 4XLO 24162851 Crystal Structure of EncM (crystallized with 4 mM NADPH) 2015-01-13 2015-01-28 Teufel, R.,Miyanaga, A.,Michaudel, Q.,Stull, F.,Louie, G.,Noel, J.P.,Baran, P.S.,Palfey, B.,Moore, B.S. Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement. Nature 2013 503 552 556 4OY4 25678659 calcium-free CaMPARI v0.2 2014-02-10 2015-02-18 Fosque, B.F.,Sun, Y.,Dana, H.,Yang, C.T.,Ohyama, T.,Tadross, M.R.,Patel, R.,Zlatic, M.,Kim, D.S.,Ahrens, M.B.,Jayaraman, V.,Looger, L.L.,Schreiter, E.R. Neural circuits. Labeling of active neural circuits in vivo with designed calcium integrators. Science 2015 347 755 760 4XP8 25678709 Structure of EtgA D60N mutant 2015-01-16 2015-02-18 Burkinshaw, B.J.,Deng, W.,Lameignere, E.,Wasney, G.A.,Zhu, H.,Worrall, L.J.,Finlay, B.B.,Strynadka, N.C. Structural Analysis of a Specialized Type III Secretion System Peptidoglycan-cleaving Enzyme. J.Biol.Chem. 2015 290 10406 10417 4WZB 16123301 Crystal Structure of MgAMPPCP-bound Av2-Av1 complex 2014-11-19 2015-02-25 Tezcan, F.A.,Kaiser, J.T.,Mustafi, D.,Walton, M.Y.,Howard, J.B.,Rees, D.C. Nitrogenase complexes: multiple docking sites for a nucleotide switch protein. Science 2005 309 1377 1380 4P4V 25915729 Hexamer formed by a macrocyclic peptide derived from beta-2-microglobulin (63-69) - (ORN)YLL(PHI)YTE(ORN)KVA(MAA)AVK 2014-03-13 2015-05-06 Spencer, R.K.,Kreutzer, A.G.,Salveson, P.J.,Li, H.,Nowick, J.S. X-ray Crystallographic Structures of Oligomers of Peptides Derived from beta 2-Microglobulin. J.Am.Chem.Soc. 2015 137 6304 6311 4P4X 25915729 Dodecamer formed by a macrocyclic peptide derived from beta-2-microglobulin (63-69) - (ORN)YLL(PHI)YTE(ORN)KVA(MLE)AVK 2014-03-13 2015-05-06 Spencer, R.K.,Kreutzer, A.G.,Salveson, P.J.,Li, H.,Nowick, J.S. X-ray Crystallographic Structures of Oligomers of Peptides Derived from beta 2-Microglobulin. J.Am.Chem.Soc. 2015 137 6304 6311 4RNQ 25897591 Crystal structure of tobacco 5-epi-aristolochene synthase (TEAS) with anilinogeranyl diphosphate (AGPP) and geraniline 2014-10-24 2015-05-06 Rising, K.A.,Crenshaw, C.M.,Koo, H.J.,Subramanian, T.,Chehade, K.A.,Starks, C.,Allen, K.D.,Andres, D.A.,Spielmann, H.P.,Noel, J.P.,Chappell, J. Formation of a Novel Macrocyclic Alkaloid from the Unnatural Farnesyl Diphosphate Analogue Anilinogeranyl Diphosphate by 5-Epi-Aristolochene Synthase. Acs Chem.Biol. 2015 10 1729 1736 4XP9 25970245 X-ray structure of Drosophila dopamine transporter bound to psychostimulant D-amphetamine 2015-01-16 2015-05-06 Wang, K.H.,Penmatsa, A.,Gouaux, E. Neurotransmitter and psychostimulant recognition by the dopamine transporter. Nature 2015 521 322 327 4XP6 25970245 X-ray structure of Drosophila dopamine transporter bound to psychostimulant methamphetamine 2015-01-16 2015-05-13 Wang, K.H.,Penmatsa, A.,Gouaux, E. Neurotransmitter and psychostimulant recognition by the dopamine transporter. Nature 2015 521 322 327 4YHF 26006010 Bruton's tyrosine kinase in complex with a t-butyl cyanoacrylamide inhibitor 2015-02-27 2015-05-13 Bradshaw, J.M.,McFarland, J.M.,Paavilainen, V.O.,Bisconte, A.,Tam, D.,Phan, V.T.,Romanov, S.,Finkle, D.,Shu, J.,Patel, V.,Ton, T.,Li, X.,Loughhead, D.G.,Nunn, P.A.,Karr, D.E.,Gerritsen, M.E.,Funk, J.O.,Owens, T.D.,Verner, E.,Brameld, K.A.,Hill, R.J.,Goldstein, D.M.,Taunton, J. Prolonged and tunable residence time using reversible covalent kinase inhibitors. Nat.Chem.Biol. 2015 11 525 531 4ZJT X-ray crystal structure of Lymnaea stagnalis acetylcholine binding protein (LsAChBP) in complex with 2-Thiophenylmethylene Anabaseine (2TAB) 2015-04-29 2015-05-13 Bobango, J.,Wu, J.,Talley, T.T. X-ray crystal structure of Lymnaea stagnalis acetylcholine binding protein (LsAChBP) in complex with 2-Thiophenylmethylene Anabaseine (2TAB) To Be Published 0 0 0 0 4ZK1 Crystal Structure of Lymnaea stagnalis Acetylcholine-Binding Protein (LsAChBP) in Complex with 3-Pyrrolylmethylene Anabaseine 2015-04-29 2015-05-13 Bobango, J.,Wu, J.,Talley, T.T. Crystal Structure of Lymnaea stagnalis Acetylcholine-Binding Protein (LsAChBP) in Complex with 3-Pyrrolylmethylene Anabaseine To be Published 0 0 0 0 4XPA 25970245 X-ray structure of Drosophila dopamine transporter bound to 3,4dichlorophenethylamine 2015-01-16 2015-05-20 Wang, K.H.,Penmatsa, A.,Gouaux, E. Neurotransmitter and psychostimulant recognition by the dopamine transporter. Nature 2015 521 322 327 5AL9 25941976 Structure of Leishmania major peroxidase D211R mutant (high res) 2015-03-07 2015-05-20 Chreifi, G.,Hollingsworth, S.A.,Li, H.,Tripathi, S.,Arce, A.P.,Magana-Garcia, H.I.,Poulos, T.L. Enzymatic Mechanism of Leishmania major Peroxidase and the Critical Role of Specific Ionic Interactions. Biochemistry 2015 54 3328 3336 4ZN8 26101839 Using molecular dynamics simulations to predict domain swapping of computationally designed protein variants 2015-05-04 2015-05-27 Mou, Y.,Huang, P.S.,Thomas, L.M.,Mayo, S.L. Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants. J.Mol.Biol. 2015 427 2697 2706 4XZ0 25287889 ZAP-70-tSH2:compound-A complex 2015-02-03 2015-06-17 Visperas, P.R.,Winger, J.A.,Horton, T.M.,Shah, N.H.,Aum, D.J.,Tao, A.,Barros, T.,Yan, Q.,Wilson, C.G.,Arkin, M.R.,Weiss, A.,Kuriyan, J. Modification by covalent reaction or oxidation of cysteine residues in the tandem-SH2 domains of ZAP-70 and Syk can block phosphopeptide binding. Biochem. J. 2015 465 149 161 4UG5 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 6-(2-(5-(2-(2-amino-6-methylpyridin-4-yl)ethyl)pyridin-3-yl)ethyl)-4- methylpyridin-2-amine 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGQ 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N,N''-(((2S)-3-aminopropane-1,2-diyl)bis(oxymethanediylbenzene-3,1- diyl))dithiophene-2-carboximidamide 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGW 26062720 Structure of Y357F Bacillus subtilis Nitric Oxide Synthase in complex with 6-(5-((3R,4R)-4-((6-azanyl-4-methyl-pyridin-2-yl)methyl) pyrrolidin-3-yl)oxypentyl)-4-methyl-pyridin-2-amine 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4YSK 26082492 Crystal structure of apo-form SdoA from Pseudomonas putida 2015-03-17 2015-06-24 Sattler, S.A.,Wang, X.,Lewis, K.M.,DeHan, P.J.,Park, C.M.,Xin, Y.,Liu, H.,Xian, M.,Xun, L.,Kang, C. Characterizations of Two Bacterial Persulfide Dioxygenases of the Metallo-beta-lactamase Superfamily. J.Biol.Chem. 2015 290 18914 18923 4YSL 26082492 Crystal structure of SdoA from Pseudomonas putida in complex with glutathione 2015-03-17 2015-06-24 Sattler, S.A.,Wang, X.,Lewis, K.M.,DeHan, P.J.,Park, C.M.,Xin, Y.,Liu, H.,Xian, M.,Xun, L.,Kang, C. Characterizations of Two Bacterial Persulfide Dioxygenases of the Metallo-beta-lactamase Superfamily. J.Biol.Chem. 2015 290 18914 18923 5BRX X-ray crystal structure of Aplysia californica (Ac-AChBP) in complex with 2-pyridyl azatricyclo[3.3.1.13,7]decane; 2-pyridylazaadamantane; 2-Aza (TI-8480) 2015-06-01 2015-06-24 Bobango, J.,Sankaran, B.,Park, J.F.,Wu, J.,Talley, T.T. Comparisons of Binding Affinities for Neuronal Nicotinic Receptors (NNRs) and AChBPs To Be Published 0 0 0 0 5BW2 X-ray crystal structure of Aplysia californica acetylcholine binding protein (Ac-AChBP) Y55W in complex with 2-Pyridin-3-yl-1-aza-bicyclo[2.2.2]octane; 2-(3-pyridyl)quinuclidine; 2-PQ (TI-4699) 2015-06-05 2015-06-24 Bobango, J.,Sankaran, B.,Park, J.F.,Wu, J.,Talley, T.T. Comparisons of Binding Affinities for Neuronal Nicotinic Receptors (NNRs) and AChBPs To Be Published 0 0 0 0 4D7O 26091171 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(4-(((3-Fluorophenethyl)amino)methyl)phenyl)-4- methylpyridin-2-amine 2014-11-25 2015-07-01 Holden, J.K.,Kang, S.,Beasley, F.C.,Cinelli, M.A.,Li, H.,Roy, S.G.,Dejam, D.,Edinger, A.L.,Nizet, V.,Silverman, R.B.,Poulos, T.L. Nitric Oxide Synthase as a Target for Methicillin-Resistant Staphylococcus Aureus Chem.Biol. 2015 22 785 0 4UH0 26120733 Structure of rat neuronal nitric oxide synthase heme domain in complex with N1-(6-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)pyridin-2- yl)-N1,N2-dimethylethane-1,2-diamine 2015-03-23 2015-07-15 Kang, S.,Li, H.,Tang, W.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. 2-Aminopyridines with a Truncated Side Chain to Improve Human Neuronal Nitric Oxide Synthase Inhibitory Potency and Selectivity. J.Med.Chem. 2015 58 5548 0 4UH1 26120733 Structure of rat neuronal nitric oxide synthase heme domain in complex with N1-(5-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)pyridin-3- yl)-N1,N2-dimethylethane-1,2-diamine 2015-03-23 2015-07-15 Kang, S.,Li, H.,Tang, W.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. 2-Aminopyridines with a Truncated Side Chain to Improve Human Neuronal Nitric Oxide Synthase Inhibitory Potency and Selectivity. J.Med.Chem. 2015 58 5548 0 4UH2 26120733 Structure of rat neuronal nitric oxide synthase heme domain in complex with N1-(3-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)-5-(trifluoromethyl)phenyl)-N1,N2-dimethylethane-1,2-diamine 2015-03-23 2015-07-15 Kang, S.,Li, H.,Tang, W.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. 2-Aminopyridines with a Truncated Side Chain to Improve Human Neuronal Nitric Oxide Synthase Inhibitory Potency and Selectivity. J.Med.Chem. 2015 58 5548 0 4Y7N 26123024 The Structure Insight into 5-Carboxycytosine Recognition by RNA Polymerase II during Transcription Elongation. 2015-02-15 2015-07-15 Wang, L.,Zhou, Y.,Xu, L.,Xiao, R.,Lu, X.,Chen, L.,Chong, J.,Li, H.,He, C.,Fu, X.D.,Wang, D. Molecular basis for 5-carboxycytosine recognition by RNA polymerase II elongation complex. Nature 2015 523 621 625 4X6Q 26278174 An Isoform-specific Myristylation Switch Targets RIIb PKA Holoenzymes to Membranes 2014-12-08 2015-07-22 Zhang, P.,Ye, F.,Bastidas, A.C.,Kornev, A.P.,Wu, J.,Ginsberg, M.H.,Taylor, S.S. An Isoform-Specific Myristylation Switch Targets Type II PKA Holoenzymes to Membranes. Structure 2015 23 1563 1572 4X6R 26278174 An Isoform-specific Myristylation Switch Targets RIIb PKA Holoenzymes to Membranes 2014-12-09 2015-07-22 Zhang, P.,Ye, F.,Bastidas, A.C.,Kornev, A.P.,Wu, J.,Ginsberg, M.H.,Taylor, S.S. An Isoform-Specific Myristylation Switch Targets Type II PKA Holoenzymes to Membranes. Structure 2015 23 1563 1572 5CNN 26124280 Crystal structure of the EGFR kinase domain mutant I682Q 2015-07-17 2015-07-29 Kovacs, E.,Das, R.,Wang, Q.,Collier, T.S.,Cantor, A.,Huang, Y.,Wong, K.,Mirza, A.,Barros, T.,Grob, P.,Jura, N.,Bose, R.,Kuriyan, J. Analysis of the Role of the C-Terminal Tail in the Regulation of the Epidermal Growth Factor Receptor. Mol.Cell.Biol. 2015 35 3083 3102 5CNO 26124280 Crystal structure of the EGFR kinase domain mutant V924R 2015-07-17 2015-07-29 Kovacs, E.,Das, R.,Wang, Q.,Collier, T.S.,Cantor, A.,Huang, Y.,Wong, K.,Mirza, A.,Barros, T.,Grob, P.,Jura, N.,Bose, R.,Kuriyan, J. Analysis of the Role of the C-Terminal Tail in the Regulation of the Epidermal Growth Factor Receptor. Mol.Cell.Biol. 2015 35 3083 3102 4Y0L 26278184 Mycobacterial membrane protein MmpL11D2 2015-02-06 2015-08-12 Chim, N.,Torres, R.,Liu, Y.,Capri, J.,Batot, G.,Whitelegge, J.P.,Goulding, C.W. The Structure and Interactions of Periplasmic Domains of Crucial MmpL Membrane Proteins from Mycobacterium tuberculosis. Chem.Biol. 2015 22 1098 1107 5CI7 26275681 Structure of ULK1 bound to a selective inhibitor 2015-07-11 2015-08-26 Lazarus, M.B.,Shokat, K.M. Discovery and structure of a new inhibitor scaffold of the autophagy initiating kinase ULK1. Bioorg.Med.Chem. 2015 23 5483 5488 5DHK 26378620 Nicotiana tabacum 5-epi-aristolochene synthase mutant W273E - alkylated 2015-08-31 2015-09-16 Kersten, R.D.,Diedrich, J.K.,Yates, J.R.,Noel, J.P. Mechanism-Based Post-Translational Modification and Inactivation in Terpene Synthases. Acs Chem.Biol. 2015 10 2501 2511 4D78 26371436 Cytochrome P450 3A4 bound to an inhibitor 2014-11-21 2015-09-23 Kaur, P.,Chamberlin, R.,Poulos, T.L.,Sevrioukova, I.F. Structure-Based Inhibitor Design for Evaluation of a Cyp3A4 Pharmacophore Model. J.Med.Chem. 2016 59 4210 0 4ZTU 26056153 Structural basis for processivity and antiviral drug toxicity in human mitochondrial DNA replicase 2015-05-15 2015-09-23 Szymanski, M.R.,Kuznestov, V.B.,Shumate, C.K.,Meng, Q.,Lee, Y.-S.,Patel, G.,Patel, S.S.,Yin, Y.W. Structural basis for processivity and antiviral drug toxicity in human mitochondrial DNA replicase EMBO J. 2015 34 1959 0 5CRD 26416891 Wild-type human skeletal calsequestrin 2015-07-22 2015-10-07 Lewis, K.M.,Ronish, L.A.,Rios, E.,Kang, C. Characterization of Two Human Skeletal Calsequestrin Mutants Implicated in Malignant Hyperthermia and Vacuolar Aggregate Myopathy. J.Biol.Chem. 2015 290 28665 28674 5CRE 26416891 Human skeletal calsequestrin, D210G mutant low-calcium complex 2015-07-22 2015-10-07 Lewis, K.M.,Ronish, L.A.,Rios, E.,Kang, C. Characterization of Two Human Skeletal Calsequestrin Mutants Implicated in Malignant Hyperthermia and Vacuolar Aggregate Myopathy. J.Biol.Chem. 2015 290 28665 28674 5CRG 26416891 Human skeletal calsequestrin, D210G mutant high-calcium complex 2015-07-22 2015-10-07 Lewis, K.M.,Ronish, L.A.,Rios, E.,Kang, C. Characterization of Two Human Skeletal Calsequestrin Mutants Implicated in Malignant Hyperthermia and Vacuolar Aggregate Myopathy. J.Biol.Chem. 2015 290 28665 28674 5CRH 26416891 Human skeletal calsequestrin, M53T mutant high-calcium complex 2015-07-22 2015-10-07 Lewis, K.M.,Ronish, L.A.,Rios, E.,Kang, C. Characterization of Two Human Skeletal Calsequestrin Mutants Implicated in Malignant Hyperthermia and Vacuolar Aggregate Myopathy. J.Biol.Chem. 2015 290 28665 28674 4ZQW 26449640 CdiI from Escherichia coli EC869 in complex with a macrocyclic peptide 2015-05-11 2015-10-28 Morse, R.P.,Willett, J.L.,Johnson, P.M.,Zheng, J.,Credali, A.,Iniguez, A.,Nowick, J.S.,Hayes, C.S.,Goulding, C.W. Diversification of beta-Augmentation Interactions between CDI Toxin/Immunity Proteins. J.Mol.Biol. 2015 427 3766 3784 5AD5 26469213 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-((3-(2-(Methylamino)ethyl)phenoxy)methyl)quinolin-2- amine 2015-08-20 2015-10-28 Cinelli, M.A.,Li, H.,Pensa, A.V.,Kang, S.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 8694 0 5AD7 26469213 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-((3-(Methylamino)methyl)phenoxy)methyl)quinolin-2- amine 2015-08-20 2015-10-28 Cinelli, M.A.,Li, H.,Pensa, A.V.,Kang, S.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 8694 0 5AD8 26469213 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-((3-Aminomethyl)phenoxy)methyl)quinolin-2-amine 2015-08-20 2015-10-28 Cinelli, M.A.,Li, H.,Pensa, A.V.,Kang, S.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 8694 0 5AD9 26469213 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-((4-(Dimethylamino)methyl)phenoxy)methyl)quinolin-2- amine 2015-08-20 2015-10-28 Cinelli, M.A.,Li, H.,Pensa, A.V.,Kang, S.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 8694 0 5ADA 26469213 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-(((3-((Dimethylamino)methyl)phenyl)amino)methyl) quinolin-2-amine 2015-08-20 2015-10-28 Cinelli, M.A.,Li, H.,Pensa, A.V.,Kang, S.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 8694 0 5ADI 26469213 Structure of human nNOS R354A G357D mutant heme domain in complex with 7-(((5-((Methylamino)methyl)pyridin-3-yl)oxy)methyl)quinolin-2- amine 2015-08-20 2015-10-28 Cinelli, M.A.,Li, H.,Pensa, A.V.,Kang, S.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 8694 0 5ADJ 26469213 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 7-((3-(2-(Methylamino)ethyl)phenoxy)methyl)quinolin-2- amine 2015-08-20 2015-10-28 Cinelli, M.A.,Li, H.,Pensa, A.V.,Kang, S.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 8694 0 5ADM 26469213 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 7-((3-Aminomethyl)phenoxy)methyl)quinolin-2-amine 2015-08-20 2015-10-28 Cinelli, M.A.,Li, H.,Pensa, A.V.,Kang, S.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 8694 0 4X4J Structural and Functional Studies of BexE: Insights into Oxidation During BE-7585A Biosynthesis 2014-12-02 2015-12-02 Tsai, S.-C.,Jackson, D.R.,Patel, A.,Barajas, J.F.,Rohr, J.,Yu, X.,Liu, H.-W.,Sasaki, E.,Calveras, J.,Metsa-Ketela, M. Structural and Functional Studies of BexE: Insights into Oxidation During BE-7585A Biosynthesis To Be Published 0 0 0 0 4YI8 26584024 Crystal structure of non-myristoylated E153A recoverin at 1.2 A resolution with calcium ions bound to EF-hands 2 and 3 2015-02-28 2015-12-02 Kumar, R.P.,Ranaghan, M.J.,Ganjei, A.Y.,Oprian, D.D. Crystal Structure of Recoverin with Calcium Ions Bound to Both Functional EF Hands. Biochemistry 2015 54 7222 7228 4YI9 26584024 Crystal structure of non-myristoylated E153A recoverin at 1.35 A resolution with a sodium ion bound to EF-hand 2 and calcium ion bound to EF-hand 3 2015-02-28 2015-12-02 Kumar, R.P.,Ranaghan, M.J.,Ganjei, A.Y.,Oprian, D.D. Crystal Structure of Recoverin with Calcium Ions Bound to Both Functional EF Hands. Biochemistry 2015 54 7222 7228 5E36 Crystal structure of 2'-propargyl-modified DNA 8mer-duplex 2015-10-02 2015-12-02 Sheng, J.,Gan, J. Crystal structure of 2'-propargyl-modified DNA 8mer-duplex To Be Published 0 0 0 0 5CWQ 26675729 Crystal structure of de novo designed helical repeat protein DHR81 2015-07-28 2015-12-16 Brunette, T.J.,Parmeggiani, F.,Huang, P.S.,Bhabha, G.,Ekiert, D.C.,Tsutakawa, S.E.,Hura, G.L.,Tainer, J.A.,Baker, D. Exploring the repeat protein universe through computational protein design. Nature 2015 528 580 584 4XS7 Determining the Molecular Basis for Starter Unit Selection During Daunorubicin Biosynthesis 2015-01-22 2016-01-27 Jackson, D.R.,Valentic, T.R.,Tsai, S.C.,Patel, A.,Mohammed, L.,Vasilakis, K.,Wattana-amorn, P.,Long, P.F.,Crump, M.P.,Crosby, J. Determining the Molecular Basis for Starter Unit Selection During Daunorubicin Biosynthesis To Be Published 0 0 0 0 4XSA Determining the Molecular Basis for Starter Unit Selection During Daunorubicin Biosynthesis 2015-01-22 2016-01-27 Jackson, D.R.,Valentic, T.R.,Tsai, S.C.,Patel, A.,Mohammed, L.,Vasilakis, K.,Wattana-amorn, P.,Long, P.F.,Crump, M.P.,Crosby, J. Determining the Molecular Basis for Starter Unit Selection During Daunorubicin Biosynthesis To Be Published 0 0 0 0 5C53 26124101 Probing the Structural and Molecular Basis of Nucleotide Selectivity by Human Mitochondrial DNA Polymerase gamma 2015-06-19 2016-01-27 Sohl, C.D.,Szymanski, M.R.,Mislak, A.C.,Shumate, C.K.,Amiralaei, S.,Schinazi, R.F.,Anderson, K.S.,Yin, Y.W. Probing the structural and molecular basis of nucleotide selectivity by human mitochondrial DNA polymerase gamma. Proc.Natl.Acad.Sci.USA 2015 112 8596 8601 5CV3 26787882 C. remanei PGL-1 Dimerization Domain - Hg 2015-07-25 2016-02-03 Aoki, S.T.,Kershner, A.M.,Bingman, C.A.,Wickens, M.,Kimble, J. PGL germ granule assembly protein is a base-specific, single-stranded RNase. Proc.Natl.Acad.Sci.USA 2016 113 1279 1284 5D4Q 26850169 Crystal structure of GASDALIE IgG1 Fc 2015-08-08 2016-02-10 Ahmed, A.A.,Keremane, S.R.,Vielmetter, J.,Bjorkman, P.J. Structural characterization of GASDALIE Fc bound to the activating Fc receptor Fc gamma RIIIa. J.Struct.Biol. 2016 194 78 89 5D6D 26850169 Crystal structure of GASDALIE IgG1 Fc in complex with FcgRIIIa 2015-08-12 2016-02-10 Ahmed, A.A.,Keremane, S.R.,Vielmetter, J.,Bjorkman, P.J. Structural characterization of GASDALIE Fc bound to the activating Fc receptor Fc gamma RIIIa. J.Struct.Biol. 2016 194 78 89 5FAL 26858288 Crystal structure of PvHCT in complex with CoA and p-coumaroyl-shikimate 2015-12-11 2016-02-24 Eudes, A.,Pereira, J.H.,Yogiswara, S.,Wang, G.,Teixeira Benites, V.,Baidoo, E.E.,Lee, T.S.,Adams, P.D.,Keasling, J.D.,Loque, D. Exploiting the Substrate Promiscuity of Hydroxycinnamoyl-CoA:Shikimate Hydroxycinnamoyl Transferase to Reduce Lignin. Plant Cell.Physiol. 2016 57 568 579 5EJC 26893383 Crystal structural of the TSC1-TBC1D7 complex 2015-11-01 2016-03-02 Qin, J.,Wang, Z.,Hoogeveen-Westerveld, M.,Shen, G.,Gong, W.,Nellist, M.,Xu, W. Structural Basis of the Interaction between Tuberous Sclerosis Complex 1 (TSC1) and Tre2-Bub2-Cdc16 Domain Family Member 7 (TBC1D7). J.Biol.Chem. 2016 291 8591 8601 4YAP 26940872 Crystal structure of LigG-apo form from Sphingobium sp. strain SYK-6 2015-02-17 2016-03-09 Pereira, J.H.,Heins, R.A.,Gall, D.L.,McAndrew, R.P.,Deng, K.,Holland, K.C.,Donohue, T.J.,Noguera, D.R.,Simmons, B.A.,Sale, K.L.,Ralph, J.,Adams, P.D. Structural and Biochemical Characterization of the Early and Late Enzymes in the Lignin beta-Aryl Ether Cleavage Pathway from Sphingobium sp. SYK-6. J.Biol.Chem. 2016 291 10228 10238 4YAV 26940872 Crystal structure of LigG in complex with B-glutathionyl-acetoveratrone (GS-AV) from Sphingobium sp. strain SYK-6 2015-02-17 2016-03-09 Pereira, J.H.,Heins, R.A.,Gall, D.L.,McAndrew, R.P.,Deng, K.,Holland, K.C.,Donohue, T.J.,Noguera, D.R.,Simmons, B.A.,Sale, K.L.,Ralph, J.,Adams, P.D. Structural and Biochemical Characterization of the Early and Late Enzymes in the Lignin beta-Aryl Ether Cleavage Pathway from Sphingobium sp. SYK-6. J.Biol.Chem. 2016 291 10228 10238 5BUK 27001835 Structure of flavin-dependent chlorinase Mpy16 2015-06-03 2016-03-09 El Gamal, A.,Agarwal, V.,Diethelm, S.,Rahman, I.,Schorn, M.A.,Sneed, J.M.,Louie, G.V.,Whalen, K.E.,Mincer, T.J.,Noel, J.P.,Paul, V.J.,Moore, B.S. Biosynthesis of coral settlement cue tetrabromopyrrole in marine bacteria by a uniquely adapted brominase-thioesterase enzyme pair. Proc.Natl.Acad.Sci.USA 2016 113 3797 3802 5BUL 27001835 Structure of flavin-dependent brominase Bmp2 triple mutant Y302S F306V A345W 2015-06-04 2016-03-09 El Gamal, A.,Agarwal, V.,Diethelm, S.,Rahman, I.,Schorn, M.A.,Sneed, J.M.,Louie, G.V.,Whalen, K.E.,Mincer, T.J.,Noel, J.P.,Paul, V.J.,Moore, B.S. Biosynthesis of coral settlement cue tetrabromopyrrole in marine bacteria by a uniquely adapted brominase-thioesterase enzyme pair. Proc.Natl.Acad.Sci.USA 2016 113 3797 3802 5BVA 27001835 Structure of flavin-dependent brominase Bmp2 2015-06-04 2016-03-09 El Gamal, A.,Agarwal, V.,Diethelm, S.,Rahman, I.,Schorn, M.A.,Sneed, J.M.,Louie, G.V.,Whalen, K.E.,Mincer, T.J.,Noel, J.P.,Paul, V.J.,Moore, B.S. Biosynthesis of coral settlement cue tetrabromopyrrole in marine bacteria by a uniquely adapted brominase-thioesterase enzyme pair. Proc.Natl.Acad.Sci.USA 2016 113 3797 3802 5DQP 26928990 EDTA monooxygenase (EmoA) from Chelativorans sp. BNC1 2015-09-15 2016-03-16 Jun, S.Y.,Lewis, K.M.,Youn, B.,Xun, L.,Kang, C. Structural and biochemical characterization of EDTA monooxygenase and its physical interaction with a partner flavin reductase. Mol.Microbiol. 2016 100 989 1003 5F1T 26926877 Crystal structure of a macrocyclic peptide containing fragments from alpha-synuclein 36-55. 2015-11-30 2016-03-16 Salveson, P.J.,Spencer, R.K.,Nowick, J.S. X-ray Crystallographic Structure of Oligomers Formed by a Toxic beta-Hairpin Derived from alpha-Synuclein: Trimers and Higher-Order Oligomers. J.Am.Chem.Soc. 2016 138 4458 4467 5F1W 26926877 Crystal structure of the enantiomer of a macrocyclic peptide containing fragments from alpha synuclein 36-55 2015-11-30 2016-03-16 Salveson, P.J.,Spencer, R.K.,Nowick, J.S. X-ray Crystallographic Structure of Oligomers Formed by a Toxic beta-Hairpin Derived from alpha-Synuclein: Trimers and Higher-Order Oligomers. J.Am.Chem.Soc. 2016 138 4458 4467 5HOX 26967810 X-ray crystallographic structure of an A-beta 17_36 beta-hairpin. Synchrotron data set. (LVFFAEDCGSNKCAII(SAR)LMV). 2016-01-19 2016-03-23 Kreutzer, A.G.,Hamza, I.L.,Spencer, R.K.,Nowick, J.S. X-ray Crystallographic Structures of a Trimer, Dodecamer, and Annular Pore Formed by an A beta 17-36 beta-Hairpin. J.Am.Chem.Soc. 2016 138 4634 4642 5IG0 26949248 Crystal structure of S. rosetta CaMKII hub 2016-02-26 2016-03-23 Bhattacharyya, M.,Stratton, M.M.,Going, C.C.,McSpadden, E.D.,Huang, Y.,Susa, A.C.,Elleman, A.,Cao, Y.M.,Pappireddi, N.,Burkhardt, P.,Gee, C.L.,Barros, T.,Schulman, H.,Williams, E.R.,Kuriyan, J. Molecular mechanism of activation-triggered subunit exchange in Ca(2+)/calmodulin-dependent protein kinase II. Elife 2016 5 0 0 5IG1 26949248 Crystal structure of S. rosetta CaMKII kinase domain 2016-02-26 2016-03-23 Bhattacharyya, M.,Stratton, M.M.,Going, C.C.,McSpadden, E.D.,Huang, Y.,Susa, A.C.,Elleman, A.,Cao, Y.M.,Pappireddi, N.,Burkhardt, P.,Gee, C.L.,Barros, T.,Schulman, H.,Williams, E.R.,Kuriyan, J. Molecular mechanism of activation-triggered subunit exchange in Ca(2+)/calmodulin-dependent protein kinase II. Elife 2016 5 0 0 5IG3 26949248 Crystal structure of the human CaMKII-alpha hub 2016-02-26 2016-03-23 Bhattacharyya, M.,Stratton, M.M.,Going, C.C.,McSpadden, E.D.,Huang, Y.,Susa, A.C.,Elleman, A.,Cao, Y.M.,Pappireddi, N.,Burkhardt, P.,Gee, C.L.,Barros, T.,Schulman, H.,Williams, E.R.,Kuriyan, J. Molecular mechanism of activation-triggered subunit exchange in Ca(2+)/calmodulin-dependent protein kinase II. Elife 2016 5 0 0 5IG4 26949248 Crystal structure of N. vectensis CaMKII-A hub 2016-02-26 2016-03-23 Bhattacharyya, M.,Stratton, M.M.,Going, C.C.,McSpadden, E.D.,Huang, Y.,Susa, A.C.,Elleman, A.,Cao, Y.M.,Pappireddi, N.,Burkhardt, P.,Gee, C.L.,Barros, T.,Schulman, H.,Williams, E.R.,Kuriyan, J. Molecular mechanism of activation-triggered subunit exchange in Ca(2+)/calmodulin-dependent protein kinase II. Elife 2016 5 0 0 5FBY 27027290 Crystal structure of ctSPD 2015-12-14 2016-03-30 Lin, Z.,Luo, X.,Yu, H. Structural basis of cohesin cleavage by separase. Nature 2016 532 131 134 5FVP 27050842 Structure of rat neuronal nitric oxide synthase heme domain in complex with 4-methyl-6-[2-(5-morpholin-4-ylpyridin-3-yl)ethyl]pyridin-2-amine 2016-02-10 2016-04-20 Wang, H.,Qin, Y.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibition by Optimization of the 2-Aminopyridine-Based Scaffold with a Pyridine Linker. J.Med.Chem. 2016 59 4913 0 5FVQ 27050842 Structure of rat neuronal nitric oxide synthase heme domain in complex with 4-methyl-6-(2-(5-(4-methylpiperazin-1-yl)pyridin-3-yl) ethyl)pyridin-2-amine 2016-02-10 2016-04-20 Wang, H.,Qin, Y.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibition by Optimization of the 2-Aminopyridine-Based Scaffold with a Pyridine Linker. J.Med.Chem. 2016 59 4913 0 5FVY 27050842 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 4-methyl-6-(2-(5-(4-methylpiperazin-1-yl)pyridin-3-yl) ethyl)pyridin-2-amine 2016-02-10 2016-04-20 Wang, H.,Qin, Y.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibition by Optimization of the 2-Aminopyridine-Based Scaffold with a Pyridine Linker. J.Med.Chem. 2016 59 4913 0 5FW0 27050842 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(2-(5-((2-methoxyethyl)(methyl)amino)pyridin-3-yl) ethyl)-4-methylpyridin-2-amine 2016-02-10 2016-04-20 Wang, H.,Qin, Y.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibition by Optimization of the 2-Aminopyridine-Based Scaffold with a Pyridine Linker. J.Med.Chem. 2016 59 4913 0 5C67 26957636 Human Mesotrypsin in complex with amyloid precursor protein inhibitor variant APPI-M17G/I18F/F34V 2015-06-22 2016-05-04 Cohen, I.,Kayode, O.,Hockla, A.,Sankaran, B.,Radisky, D.C.,Radisky, E.S.,Papo, N. Combinatorial protein engineering of proteolytically resistant mesotrypsin inhibitors as candidates for cancer therapy. Biochem.J. 2016 473 1329 1341 4ZR6 Lymnaea Stagnalis Acetylcholine Binding Protein in Complex with 3-[(4E)-4-[(3-methylimidazol-4-yl)methylene]-2,3-dihydropyrrol-5-yl]pyridine 2015-05-11 2016-05-11 Denton, T.T.,Bobango, J.,Talley, T.T. Structure-guided design and analysis of arylidene anabaseines and myosmines To be Published 0 0 0 0 5C51 26124101 Probing the Structural and Molecular Basis of Nucleotide Selectivity by Human Mitochondrial DNA Polymerase gamma 2015-06-19 2016-05-11 Sohl, C.D.,Szymanski, M.R.,Mislak, A.C.,Shumate, C.K.,Amiralaei, S.,Schinazi, R.F.,Anderson, K.S.,Yin, Y.W. Probing the structural and molecular basis of nucleotide selectivity by human mitochondrial DNA polymerase gamma. Proc.Natl.Acad.Sci.USA 2015 112 8596 8601 5FS9 27178839 Crystal structure of the G338E mutant of human apoptosis inducing factor 2015-12-31 2016-05-11 Sevrioukova, I.F. Structure/Function Relations in Aifm1 Variants Associated with Neurodegenerative Disorders. J.Mol.Biol. 2016 428 3650 0 5JME Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with alpha-conotoxin PeIA 2016-04-28 2016-05-11 Bobango, J.,McIntosh, J.M.,Sankaran, B.,Talley, T.T. Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with alpha-conotoxin PeIA To Be Published 0 0 0 0 5IZS 27151862 De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity 2016-03-25 2016-05-25 Boyken, S.E.,Chen, Z.,Groves, B.,Langan, R.A.,Oberdorfer, G.,Ford, A.,Gilmore, J.M.,Xu, C.,DiMaio, F.,Pereira, J.H.,Sankaran, B.,Seelig, G.,Zwart, P.H.,Baker, D. De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity. Science 2016 352 680 687 5J0J 27151862 De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity 2016-03-28 2016-05-25 Boyken, S.E.,Chen, Z.,Groves, B.,Langan, R.A.,Oberdorfer, G.,Ford, A.,Gilmore, J.M.,Xu, C.,DiMaio, F.,Pereira, J.H.,Sankaran, B.,Seelig, G.,Zwart, P.H.,Baker, D. De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity. Science 2016 352 680 687 5G0P 27250740 Structure of rat neuronal nitric oxide synthase M336V D597N mutant heme domain in complex with 6-(2-(5-(3-(DIMETHYLAMINO)PROPYL)PYRIDIN- 3-YL)ETHYL)-4-METHYLPYRIDIN-2-AMINE 2016-03-21 2016-06-15 Li, H.,Wang, H.,Kang, S.,Silverman, R.B.,Poulos, T.L. Electrostatic Control of Isoform Selective Inhibitor Binding in Nitric Oxide Synthase. Biochemistry 2016 55 3702 0 5KBW 27312125 Crystal structure of TmRibU, the riboflavin-binding S subunit from the Thermotoga maritima ECF transporter 2016-06-03 2016-06-29 Karpowich, N.K.,Song, J.,Wang, D.N. An Aromatic Cap Seals the Substrate Binding Site in an ECF-Type S Subunit for Riboflavin. J.Mol.Biol. 2016 428 3118 3130 5JRX 27328180 Crystal structure of Fe(II) CO-bound H-NOX protein from C. subterraneus 2016-05-06 2016-07-06 Hespen, C.W.,Bruegger, J.J.,Phillips-Piro, C.M.,Marletta, M.A. Structural and Functional Evidence Indicates Selective Oxygen Signaling in Caldanaerobacter subterraneus H-NOX. Acs Chem.Biol. 2016 11 2337 2346 4YMP Crystal structure of the Bacillus anthracis Hal NEAT domain in complex with heme 2015-03-07 2016-07-20 Torres, R.,Goulding, C.W. Crystal structure of the Bacillus anthracis Hal NEAT domain in complex with heme To Be Published 0 0 0 0 5HYP 27595425 Structure of human C4b-binding protein alpha cain CCP domains 1 and 2 in complex with the hypervariable region of group A Streptococcus M28 protein 2016-02-01 2016-07-20 Buffalo, C.Z.,Bahn-Suh, A.J.,Hirakis, S.P.,Biswas, T.,Amaro, R.E.,Nizet, V.,Ghosh, P. Conserved patterns hidden within group A Streptococcus M protein hypervariability recognize human C4b-binding protein. Nat Microbiol 2016 1 16155 16155 5I0Q 27595425 Structure of human C4b-binding protein alpha chain CCP domains 1 and 2 in complex with the hypervariable region of mutant group A Streptococcus M2 (K65A, N66A) protein 2016-02-04 2016-07-20 Buffalo, C.Z.,Bahn-Suh, A.J.,Hirakis, S.P.,Biswas, T.,Amaro, R.E.,Nizet, V.,Ghosh, P. Conserved patterns hidden within group A Streptococcus M protein hypervariability recognize human C4b-binding protein. Nat Microbiol 2016 1 16155 16155 5K16 27373336 Crystal structure of free Ubiquitin-specific protease 12 2016-05-17 2016-07-20 Li, H.,Lim, K.S.,Kim, H.,Hinds, T.R.,Jo, U.,Mao, H.,Weller, C.E.,Sun, J.,Chatterjee, C.,D'Andrea, A.D.,Zheng, N. Allosteric Activation of Ubiquitin-Specific Proteases by beta-Propeller Proteins UAF1 and WDR20. Mol.Cell 2016 63 249 260 5K19 27373336 Crystal structure of WD repeat-containing protein 20 2016-05-17 2016-07-20 Li, H.,Lim, K.S.,Kim, H.,Hinds, T.R.,Jo, U.,Mao, H.,Weller, C.E.,Sun, J.,Chatterjee, C.,D'Andrea, A.D.,Zheng, N. Allosteric Activation of Ubiquitin-Specific Proteases by beta-Propeller Proteins UAF1 and WDR20. Mol.Cell 2016 63 249 260 5K1A 27373336 Crystal structure of the UAF1-USP12 complex in C2 space group 2016-05-18 2016-07-20 Li, H.,Lim, K.S.,Kim, H.,Hinds, T.R.,Jo, U.,Mao, H.,Weller, C.E.,Sun, J.,Chatterjee, C.,D'Andrea, A.D.,Zheng, N. Allosteric Activation of Ubiquitin-Specific Proteases by beta-Propeller Proteins UAF1 and WDR20. Mol.Cell 2016 63 249 260 5K1C 27373336 Crystal structure of the UAF1/WDR20/USP12 complex 2016-05-18 2016-07-20 Li, H.,Lim, K.S.,Kim, H.,Hinds, T.R.,Jo, U.,Mao, H.,Weller, C.E.,Sun, J.,Chatterjee, C.,D'Andrea, A.D.,Zheng, N. Allosteric Activation of Ubiquitin-Specific Proteases by beta-Propeller Proteins UAF1 and WDR20. Mol.Cell 2016 63 249 260 5K67 27385206 Designed Artificial Cupredoxins 2016-05-24 2016-07-20 Mann, S.I.,Heinisch, T.,Weitz, A.C.,Hendrich, M.P.,Ward, T.R.,Borovik, A.S. Modular Artificial Cupredoxins. J.Am.Chem.Soc. 2016 138 9073 9076 5K67 27385206 Designed Artificial Cupredoxins 2016-05-24 2016-07-20 Mann, S.I.,Heinisch, T.,Weitz, A.C.,Hendrich, M.P.,Ward, T.R.,Borovik, A.S. Modular Artificial Cupredoxins. J.Am.Chem.Soc. 2016 138 9073 9076 5K68 27385206 Designed Artificial Cupredoxins 2016-05-24 2016-07-20 Mann, S.I.,Heinisch, T.,Weitz, A.C.,Hendrich, M.P.,Ward, T.R.,Borovik, A.S. Modular Artificial Cupredoxins. J.Am.Chem.Soc. 2016 138 9073 9076 5K68 27385206 Designed Artificial Cupredoxins 2016-05-24 2016-07-20 Mann, S.I.,Heinisch, T.,Weitz, A.C.,Hendrich, M.P.,Ward, T.R.,Borovik, A.S. Modular Artificial Cupredoxins. J.Am.Chem.Soc. 2016 138 9073 9076 5L3Y 27385206 Designed Artificial Cupredoxins 2016-05-24 2016-07-20 Mann, S.I.,Heinisch, T.,Weitz, A.C.,Hendrich, M.P.,Ward, T.R.,Borovik, A.S. Modular Artificial Cupredoxins. J.Am.Chem.Soc. 2016 138 9073 9076 5L3Y 27385206 Designed Artificial Cupredoxins 2016-05-24 2016-07-20 Mann, S.I.,Heinisch, T.,Weitz, A.C.,Hendrich, M.P.,Ward, T.R.,Borovik, A.S. Modular Artificial Cupredoxins. J.Am.Chem.Soc. 2016 138 9073 9076 5E1R 27128197 Crystal structure of pecan (carya illinoinensis) vicilin, a new food allergen 2015-09-30 2016-08-10 Zhang, Y.,Lee, B.,Du, W.X.,Lyu, S.C.,Nadeau, K.C.,Grauke, L.J.,Zhang, Y.,Wang, S.,Fan, Y.,Yi, J.,McHugh, T.H. Identification and Characterization of a New Pecan [Carya illinoinensis (Wangenh.) K. Koch] Allergen, Car i 2. J.Agric.Food Chem. 2016 64 4146 4151 5K81 27480941 Crystal Structure of a Primate APOBEC3G N-Terminal Domain 2016-05-27 2016-08-10 Xiao, X.,Li, S.X.,Yang, H.,Chen, X.S. Crystal structures of APOBEC3G N-domain alone and its complex with DNA. Nat Commun 2016 7 12193 12193 5K82 27480941 Crystal Structure of a Primate APOBEC3G N-Terminal Domain 2016-05-27 2016-08-10 Xiao, X.,Li, S.X.,Yang, H.,Chen, X.S. Crystal structures of APOBEC3G N-domain alone and its complex with DNA. Nat Commun 2016 7 12193 12193 5KVA 27457122 Crystal Structure of sorghum caffeoyl-CoA O-methyltransferase (CCoAOMT) 2016-07-14 2016-08-10 Walker, A.M.,Sattler, S.A.,Regner, M.,Jones, J.P.,Ralph, J.,Vermerris, W.,Sattler, S.E.,Kang, C. The Structure and Catalytic Mechanism of Sorghum bicolor Caffeoyl-CoA O-Methyltransferase. Plant Physiol. 2016 172 78 92 5K4P 27655155 Catalytic Domain of MCR-1 phosphoethanolamine transferase 2016-05-21 2016-08-31 Stojanoski, V.,Sankaran, B.,Prasad, B.V.,Poirel, L.,Nordmann, P.,Palzkill, T. Structure of the catalytic domain of the colistin resistance enzyme MCR-1. Bmc Biol. 2016 14 81 81 5KLB 27556947 Crystal structure of the CavAb voltage-gated calcium channel(wild-type, 2.7A) 2016-06-23 2016-08-31 Tang, L.,El-Din, T.M.,Swanson, T.M.,Pryde, D.C.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for inhibition of a voltage-gated Ca(2+) channel by Ca(2+) antagonist drugs. Nature 2016 537 117 121 5KLG 27556947 Structure of CavAb(W195Y) in complex with Br-dihydropyridine derivative UK-59811 2016-06-24 2016-08-31 Tang, L.,El-Din, T.M.,Swanson, T.M.,Pryde, D.C.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for inhibition of a voltage-gated Ca(2+) channel by Ca(2+) antagonist drugs. Nature 2016 537 117 121 5KLS 27556947 Structure of CavAb in complex with Br-dihydropyridine derivative UK-59811 2016-06-25 2016-08-31 Tang, L.,El-Din, T.M.,Swanson, T.M.,Pryde, D.C.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for inhibition of a voltage-gated Ca(2+) channel by Ca(2+) antagonist drugs. Nature 2016 537 117 121 5KMD 27556947 Structure of CavAb in complex with amlodipine 2016-06-26 2016-08-31 Tang, L.,El-Din, T.M.,Swanson, T.M.,Pryde, D.C.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for inhibition of a voltage-gated Ca(2+) channel by Ca(2+) antagonist drugs. Nature 2016 537 117 121 5KMF 27556947 Structure of CavAb in complex with nimodipine 2016-06-26 2016-08-31 Tang, L.,El-Din, T.M.,Swanson, T.M.,Pryde, D.C.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for inhibition of a voltage-gated Ca(2+) channel by Ca(2+) antagonist drugs. Nature 2016 537 117 121 5KMH 27556947 Structure of CavAb in complex with Br-verapamil 2016-06-27 2016-08-31 Tang, L.,El-Din, T.M.,Swanson, T.M.,Pryde, D.C.,Scheuer, T.,Zheng, N.,Catterall, W.A. Structural basis for inhibition of a voltage-gated Ca(2+) channel by Ca(2+) antagonist drugs. Nature 2016 537 117 121 5G6B 27607918 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with two molecules of 7-((3-Fluorophenethylamino)ethyl)quinolin-2-amine 2016-06-18 2016-09-21 Holden, J.K.,Lewis, M.C.,Cinelli, M.A.,Abdullatif, Z.,Pensa, A.V.,Silverman, R.B.,Poulos, T.L. Targeting Bacterial Nitric Oxide Synthase with Aminoquinoline-Based Inhibitors. Biochemistry 2016 55 5587 5594 5G6C 27607918 Structure of Bacillus subtilis Nitric Oxide Synthase I218V in complex with 7-((3-Fluorophenethylamino)ethyl)quinolin-2-amine 2016-06-18 2016-09-21 Holden, J.K.,Lewis, M.C.,Cinelli, M.A.,Abdullatif, Z.,Pensa, A.V.,Silverman, R.B.,Poulos, T.L. Targeting Bacterial Nitric Oxide Synthase with Aminoquinoline-Based Inhibitors. Biochemistry 2016 55 5587 5594 5G6E 27607918 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 7-(((3-(Pyridin-3-yl)propyl)amino)methyl)quinolin-2-amine 2016-06-18 2016-09-21 Holden, J.K.,Lewis, M.C.,Cinelli, M.A.,Abdullatif, Z.,Pensa, A.V.,Silverman, R.B.,Poulos, T.L. Targeting Bacterial Nitric Oxide Synthase with Aminoquinoline-Based Inhibitors. Biochemistry 2016 55 5587 5594 5G6F 27607918 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 7-(((3-((Dimethylamino)methyl)phenyl)amino)methyl) quinolin-2-amine 2016-06-18 2016-09-21 Holden, J.K.,Lewis, M.C.,Cinelli, M.A.,Abdullatif, Z.,Pensa, A.V.,Silverman, R.B.,Poulos, T.L. Targeting Bacterial Nitric Oxide Synthase with Aminoquinoline-Based Inhibitors. Biochemistry 2016 55 5587 5594 5G6L 27607918 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 7-((4-Chloro-3-((methylamino)methyl)phenoxy)methyl) quinolin-2-amine 2016-06-18 2016-09-21 Holden, J.K.,Lewis, M.C.,Cinelli, M.A.,Abdullatif, Z.,Pensa, A.V.,Silverman, R.B.,Poulos, T.L. Targeting Bacterial Nitric Oxide Synthase with Aminoquinoline-Based Inhibitors. Biochemistry 2016 55 5587 5594 5G6N 27607918 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 7-((4-(Dimethylamino)methyl)phenoxy)methyl)quinolin-2- amine 2016-06-18 2016-09-21 Holden, J.K.,Lewis, M.C.,Cinelli, M.A.,Abdullatif, Z.,Pensa, A.V.,Silverman, R.B.,Poulos, T.L. Targeting Bacterial Nitric Oxide Synthase with Aminoquinoline-Based Inhibitors. Biochemistry 2016 55 5587 5594 5G6O 27607918 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with two molecules of 7-((4-(Dimethylamino)methyl)phenoxy)methyl)quinolin- 2- amine 2016-06-18 2016-09-21 Holden, J.K.,Lewis, M.C.,Cinelli, M.A.,Abdullatif, Z.,Pensa, A.V.,Silverman, R.B.,Poulos, T.L. Targeting Bacterial Nitric Oxide Synthase with Aminoquinoline-Based Inhibitors. Biochemistry 2016 55 5587 5594 5DUD Crystal structure of E. coli YbgJK 2015-09-18 2016-09-28 Arbing, M.A.,Kaufmann, M.,Shin, A.,Medrano-Soto, A.,Cascio, D.,Eisenberg, D. Crystal Structure of E. coli YbgJK To Be Published 0 0 0 0 5IK0 27328867 Tobacco 5-epi-aristolochene synthase with FPP 2016-03-03 2016-10-05 Koo, H.J.,Vickery, C.R.,Xu, Y.,Louie, G.V.,O'Maille, P.E.,Bowman, M.,Nartey, C.M.,Burkart, M.D.,Noel, J.P. Biosynthetic potential of sesquiterpene synthases: product profiles of Egyptian Henbane premnaspirodiene synthase and related mutants. J.Antibiot. 2016 69 524 533 5KN2 27649144 Native bovine skeletal calsequestrin, high-Ca2+ form 2016-06-27 2016-10-05 Lewis, K.M.,Munske, G.R.,Byrd, S.S.,Kang, J.,Cho, H.J.,Rios, E.,Kang, C. Characterization of Post-Translational Modifications to Calsequestrins of Cardiac and Skeletal Muscle. Int J Mol Sci 2016 17 0 0 5ECV 27738104 Crystal structure of Mycobacterium tuberculosis malate synthase in complex with 2-hydroxy-4-(4-methyl-1H-indol-5-yl)-4-oxobut-2-enoic acid 2015-10-20 2016-10-26 Huang, H.L.,Krieger, I.V.,Parai, M.K.,Gawandi, V.B.,Sacchettini, J.C. Mycobacterium tuberculosis Malate Synthase Structures with Fragments Reveal a Portal for Substrate/Product Exchange. J. Biol. Chem. 2016 291 27421 27432 5THQ 27779377 Comprehensive Analysis of a Novel Ketoreductase for Pentangular Polyphenol Biosynthesis 2016-09-30 2016-11-09 Valentic, T.R.,Jackson, D.R.,Brady, S.F.,Tsai, S.C. Comprehensive Analysis of a Novel Ketoreductase for Pentangular Polyphenol Biosynthesis. ACS Chem. Biol. 2016 11 3421 3430 5EIL 27940918 Computational design of a high-affinity metalloprotein homotrimer containing a metal chelating non-canonical amino acid 2015-10-30 2016-11-16 Mills, J.H.,Sheffler, W.,Ener, M.E.,Almhjell, P.J.,Oberdorfer, G.,Pereira, J.H.,Parmeggiani, F.,Sankaran, B.,Zwart, P.H.,Baker, D. Computational design of a homotrimeric metalloprotein with a trisbipyridyl core. Proc. Natl. Acad. Sci. U.S.A. 2016 113 15012 15017 5TT4 Determining the Molecular Basis For Starter Unit Selection During Daunorubicin Biosynthesis 2016-11-01 2016-11-23 Jackson, D.R.,Valentic, T.R.,Patel, A.,Tsai, S.C.,Mohammed, L.,Vasilakis, K.,Wattana-amorn, P.,Long, P.F.,Crump, M.P.,Crosby, J. Determining the Molecular Basis For Starter Unit Selection During Daunorubicin Biosynthesis To Be Published 0 0 0 0 5DHB 28058281 Cooperativity and Downstream Binding in RNA Replication 2015-08-30 2016-12-07 Zhang, W.,Tam, C.P.,Wang, J.,Szostak, J.W. Unusual Base-Pairing Interactions in Monomer-Template Complexes. ACS Cent Sci 2016 2 916 926 5DHC 28058281 Cooperativity and Downstream Binding in RNA Replication 2015-08-30 2016-12-07 Zhang, W.,Tam, C.P.,Wang, J.,Szostak, J.W. Unusual Base-Pairing Interactions in Monomer-Template Complexes. ACS Cent Sci 2016 2 916 926 5HBW 28058281 RNA primer-template complex with 2-methylimidazole-activated monomer analogue 2016-01-03 2016-12-07 Zhang, W.,Tam, C.P.,Wang, J.,Szostak, J.W. Unusual Base-Pairing Interactions in Monomer-Template Complexes. ACS Cent Sci 2016 2 916 926 5HBX 28058281 RNA primer-template complex with 2-methylimidazole-activated monomer analogue-2 binding sites 2016-01-03 2016-12-07 Zhang, W.,Tam, C.P.,Wang, J.,Szostak, J.W. Unusual Base-Pairing Interactions in Monomer-Template Complexes. ACS Cent Sci 2016 2 916 926 5HBY 28058281 RNA primer-template complex with 2-methylimidazole-activated monomer analogue-3 binding sites 2016-01-03 2016-12-07 Zhang, W.,Tam, C.P.,Wang, J.,Szostak, J.W. Unusual Base-Pairing Interactions in Monomer-Template Complexes. ACS Cent Sci 2016 2 916 926 5G3Y 28008087 Crystal structure of adenylate kinase ancestor 1 with Zn and ADP bound 2016-05-03 2016-12-28 Nguyen, V.,Wilson, C.,Hoemberger, M.,Stiller, J.B.,Agafonov, R.V.,Kutter, S.,English, J.,Theobald, D.L.,Kern, D. Evolutionary drivers of thermoadaptation in enzyme catalysis. Science 2017 355 289 294 5G40 28008087 Crystal structure of adenylate kinase ancestor 4 with Zn and AMP-ADP bound 2016-05-03 2016-12-28 Nguyen, V.,Wilson, C.,Hoemberger, M.,Stiller, J.B.,Agafonov, R.V.,Kutter, S.,English, J.,Theobald, D.L.,Kern, D. Evolutionary drivers of thermoadaptation in enzyme catalysis. Science 2017 355 289 294 5G41 28008087 Crystal structure of adenylate kinase ancestor 4 with Zn, Mg and Ap5A bound 2016-05-03 2016-12-28 Nguyen, V.,Wilson, C.,Hoemberger, M.,Stiller, J.B.,Agafonov, R.V.,Kutter, S.,English, J.,Theobald, D.L.,Kern, D. Evolutionary drivers of thermoadaptation in enzyme catalysis. Science 2017 355 289 294 5ING 28000660 A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender unit 2016-03-07 2016-12-28 Ray, L.,Valentic, T.R.,Miyazawa, T.,Withall, D.M.,Song, L.,Milligan, J.C.,Osada, H.,Takahashi, S.,Tsai, S.C.,Challis, G.L. A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender units. Nat Commun 2016 7 13609 13609 5INI 28000660 Structural basis for acyl-CoA carboxylase-mediated assembly of unusual polyketide synthase extender units incorporated into the stambomycin antibiotics 2016-03-07 2016-12-28 Ray, L.,Valentic, T.R.,Miyazawa, T.,Withall, D.M.,Song, L.,Milligan, J.C.,Osada, H.,Takahashi, S.,Tsai, S.C.,Challis, G.L. A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender units. Nat Commun 2016 7 13609 13609 5JDV 28252841 Human carbonic anhydrase II (F131W) complexed with benzo[d]thiazole-2-sulfonamide 2016-04-17 2017-01-11 Fox, J.M.,Kang, K.,Sastry, M.,Sherman, W.,Sankaran, B.,Zwart, P.H.,Whitesides, G.M. Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase. Angew. Chem. Int. Ed. Engl. 2017 56 3833 3837 5JE7 28252841 Human carbonic anhydrase II (F131Y) complexed with benzo[d]thiazole-2-sulfonamide 2016-04-17 2017-01-11 Fox, J.M.,Kang, K.,Sastry, M.,Sherman, W.,Sankaran, B.,Zwart, P.H.,Whitesides, G.M. Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase. Angew. Chem. Int. Ed. Engl. 2017 56 3833 3837 5JEH 28252841 Human carbonic anhydrase II (L198A) complexed with benzo[d]thiazole-2-sulfonamide 2016-04-18 2017-01-11 Fox, J.M.,Kang, K.,Sastry, M.,Sherman, W.,Sankaran, B.,Zwart, P.H.,Whitesides, G.M. Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase. Angew. Chem. Int. Ed. Engl. 2017 56 3833 3837 5JEP 28252841 Human carbonic anhydrase II (T199S) complexed with benzo[d]thiazole-2-sulfonamide 2016-04-18 2017-01-11 Fox, J.M.,Kang, K.,Sastry, M.,Sherman, W.,Sankaran, B.,Zwart, P.H.,Whitesides, G.M. Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase. Angew. Chem. Int. Ed. Engl. 2017 56 3833 3837 5JES 28252841 Human carbonic anhydrase II (V121T) complexed with benzo[d]thiazole-2-sulfonamide 2016-04-18 2017-01-11 Fox, J.M.,Kang, K.,Sastry, M.,Sherman, W.,Sankaran, B.,Zwart, P.H.,Whitesides, G.M. Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase. Angew. Chem. Int. Ed. Engl. 2017 56 3833 3837 5JG3 28252841 Human carbonic anhydrase II (121T/N67Q) complexed with benzo[d]thiazole-2-sulfonamide 2016-04-19 2017-01-11 Fox, J.M.,Kang, K.,Sastry, M.,Sherman, W.,Sankaran, B.,Zwart, P.H.,Whitesides, G.M. Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase. Angew. Chem. Int. Ed. Engl. 2017 56 3833 3837 5JG5 28252841 Human carbonic anhydrase II (V121T/F131Y) complexed with benzo[d]thiazole-2-sulfonamide 2016-04-19 2017-01-11 Fox, J.M.,Kang, K.,Sastry, M.,Sherman, W.,Sankaran, B.,Zwart, P.H.,Whitesides, G.M. Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase. Angew. Chem. Int. Ed. Engl. 2017 56 3833 3837 5JGS 28252841 Human carbonic anhydrase II (F131Y/L198A) complexed with benzo[d]thiazole-2-sulfonamide 2016-04-20 2017-01-11 Fox, J.M.,Kang, K.,Sastry, M.,Sherman, W.,Sankaran, B.,Zwart, P.H.,Whitesides, G.M. Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase. Angew. Chem. Int. Ed. Engl. 2017 56 3833 3837 5JGT 28252841 Human carbonic anhydrase II (F131Y/L198A) complexed with 1,3-thiazole-2-sulfonamide 2016-04-20 2017-01-11 Fox, J.M.,Kang, K.,Sastry, M.,Sherman, W.,Sankaran, B.,Zwart, P.H.,Whitesides, G.M. Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase. Angew. Chem. Int. Ed. Engl. 2017 56 3833 3837 5TDJ 28034958 RNA decamer duplex with four 2'-5'-linkages 2016-09-19 2017-01-11 Shen, F.,Luo, Z.,Liu, H.,Wang, R.,Zhang, S.,Gan, J.,Sheng, J. Structural insights into RNA duplexes with multiple 2 -5 -linkages. Nucleic Acids Res. 2017 45 3537 3546 5TDK 28034958 RNA decamer duplex with eight 2'-5'-linkages 2016-09-19 2017-01-11 Shen, F.,Luo, Z.,Liu, H.,Wang, R.,Zhang, S.,Gan, J.,Sheng, J. Structural insights into RNA duplexes with multiple 2 -5 -linkages. Nucleic Acids Res. 2017 45 3537 3546 5TGS 28045519 Crystal Structure of QueE from Bacillus subtilis with methionine bound 2016-09-28 2017-01-18 Bruender, N.A.,Grell, T.A.,Dowling, D.P.,McCarty, R.M.,Drennan, C.L.,Bandarian, V. 7-Carboxy-7-deazaguanine Synthase: A Radical S-Adenosyl-l-methionine Enzyme with Polar Tendencies. J. Am. Chem. Soc. 2017 139 1912 1920 5L33 28082595 Crystal structure of a de novo designed protein with curved beta-sheet 2016-08-03 2017-01-25 Marcos, E.,Basanta, B.,Chidyausiku, T.M.,Tang, Y.,Oberdorfer, G.,Liu, G.,Swapna, G.V.,Guan, R.,Silva, D.A.,Dou, J.,Pereira, J.H.,Xiao, R.,Sankaran, B.,Zwart, P.H.,Montelione, G.T.,Baker, D. Principles for designing proteins with cavities formed by curved beta sheets. Science 2017 355 201 206 5TPH 28082595 Crystal structure of a de novo designed protein homodimer with curved beta-sheet 2016-10-20 2017-01-25 Marcos, E.,Basanta, B.,Chidyausiku, T.M.,Tang, Y.,Oberdorfer, G.,Liu, G.,Swapna, G.V.,Guan, R.,Silva, D.A.,Dou, J.,Pereira, J.H.,Xiao, R.,Sankaran, B.,Zwart, P.H.,Montelione, G.T.,Baker, D. Principles for designing proteins with cavities formed by curved beta sheets. Science 2017 355 201 206 5TPJ 28082595 Crystal structure of a de novo designed protein with curved beta-sheet 2016-10-20 2017-01-25 Marcos, E.,Basanta, B.,Chidyausiku, T.M.,Tang, Y.,Oberdorfer, G.,Liu, G.,Swapna, G.V.,Guan, R.,Silva, D.A.,Dou, J.,Pereira, J.H.,Xiao, R.,Sankaran, B.,Zwart, P.H.,Montelione, G.T.,Baker, D. Principles for designing proteins with cavities formed by curved beta sheets. Science 2017 355 201 206 5TRV 28082595 Crystal structure of a de novo designed protein with curved beta-sheet 2016-10-27 2017-01-25 Marcos, E.,Basanta, B.,Chidyausiku, T.M.,Tang, Y.,Oberdorfer, G.,Liu, G.,Swapna, G.V.,Guan, R.,Silva, D.A.,Dou, J.,Pereira, J.H.,Xiao, R.,Sankaran, B.,Zwart, P.H.,Montelione, G.T.,Baker, D. Principles for designing proteins with cavities formed by curved beta sheets. Science 2017 355 201 206 5TS4 28082595 Crystal structure of a de novo designed protein with curved beta-sheet 2016-10-27 2017-01-25 Marcos, E.,Basanta, B.,Chidyausiku, T.M.,Tang, Y.,Oberdorfer, G.,Liu, G.,Swapna, G.V.,Guan, R.,Silva, D.A.,Dou, J.,Pereira, J.H.,Xiao, R.,Sankaran, B.,Zwart, P.H.,Montelione, G.T.,Baker, D. Principles for designing proteins with cavities formed by curved beta sheets. Science 2017 355 201 206 5TWT 27879392 Characterization of class III peroxidase from switchgrass (Panicum virgatum) 2016-11-14 2017-01-25 Moural, T.W.,Lewis, K.M.,Barnaba, C.,Zhu, F.,Palmer, N.A.,Sarath, G.,Scully, E.D.,Jones, J.P.,Sattler, S.E.,Kang, C. Characterization of Class III Peroxidases from Switchgrass. Plant Physiol. 2017 173 417 433 5U35 28082595 Crystal structure of a de novo designed protein with curved beta-sheet 2016-12-01 2017-01-25 Marcos, E.,Basanta, B.,Chidyausiku, T.M.,Tang, Y.,Oberdorfer, G.,Liu, G.,Swapna, G.V.,Guan, R.,Silva, D.A.,Dou, J.,Pereira, J.H.,Xiao, R.,Sankaran, B.,Zwart, P.H.,Montelione, G.T.,Baker, D. Principles for designing proteins with cavities formed by curved beta sheets. Science 2017 355 201 206 5UFL 28174209 Crystal structure of a CIP2A core domain 2017-01-04 2017-02-15 Wang, J.,Okkeri, J.,Pavic, K.,Wang, Z.,Kauko, O.,Halonen, T.,Sarek, G.,Ojala, P.M.,Rao, Z.,Xu, W.,Westermarck, J. Oncoprotein CIP2A is stabilized via interaction with tumor suppressor PP2A/B56. EMBO Rep. 2017 18 437 450 5IL3 Tobacco 5-epi-aristolochene synthase with MOPSO buffer molecule and Mg2+ ions 2016-03-04 2017-03-08 Koo, H.J.,Louie, G.V.,Xu, Y.,Bowman, M.,Noel, J.P. Small-molecule buffer components can directly affect terpene-synthase activity by interacting with the substrate-binding site of the enzyme To Be Published 0 0 0 0 5IL8 Tobacco 5-epi-aristolochene synthase with MOPSO buffer molecule and Ca2+ ions 2016-03-04 2017-03-08 Koo, H.J.,Louie, G.V.,Xu, Y.,Bowman, M.,Noel, J.P. Small-molecule buffer components can directly affect terpene-synthase activity by interacting with the substrate-binding site of the enzyme To Be Published 0 0 0 0 5ILH Tobacco 5-epi-aristolochene synthase with CAPSO buffer molecule and Ca2+ ions 2016-03-04 2017-03-08 Koo, H.J.,Louie, G.V.,Xu, Y.,Bowman, M.,Noel, J.P. Small-molecule buffer components can directly affect terpene-synthase activity by interacting with the substrate-binding site of the enzyme To Be Published 0 0 0 0 5ILI Tobacco 5-epi-aristolochene synthase with CAPSO buffer molecule and Mg2+ ions 2016-03-04 2017-03-08 Koo, H.J.,Louie, G.V.,Xu, Y.,Bowman, M.,Noel, J.P. Small-molecule buffer components can directly affect terpene-synthase activity by interacting with the substrate-binding site of the enzyme To Be Published 0 0 0 0 5ILZ Tobacco 5-epi-aristolochene synthase with BIS-TRIS propane (BTP) buffer molecule 2016-03-05 2017-03-08 Koo, H.J.,Louie, G.V.,Xu, Y.,Bowman, M.,Noel, J.P. Small-molecule buffer components can directly affect terpene-synthase activity by interacting with the substrate-binding site of the enzyme To Be Published 0 0 0 0 5IM1 Tobacco 5-epi-aristolochene synthase without buffer molecule in the active site 2016-03-05 2017-03-08 Koo, H.J.,Louie, G.V.,Xu, Y.,Bowman, M.,Noel, J.P. Small-molecule buffer components can directly affect terpene-synthase activity by interacting with the substrate-binding site of the enzyme To Be Published 0 0 0 0 5USE 5-Se-T4-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant 2017-02-13 2017-03-08 Fang, Z.,Dantsu, Y.,Chen, C.,Zhang, W.,Huang, Z. Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate Chemistryselect 2023 8 0 0 5V0H 29411978 RNA duplex with 2-MeImpG analogue bound-one binding site 2017-02-28 2017-03-08 Zhang, W.,Tam, C.P.,Zhou, L.,Oh, S.S.,Wang, J.,Szostak, J.W. Structural Rationale for the Enhanced Catalysis of Nonenzymatic RNA Primer Extension by a Downstream Oligonucleotide. J. Am. Chem. Soc. 2018 140 2829 2840 5V0K RNA duplex with 2-MeImpG analogue bound-3 binding sites 2017-02-28 2017-03-08 Zhang, W.,Tam, C.P.,Szostak, J.W. RNA duplex with 2-MeImpG analogue bound-3 binding sites To Be Published 0 0 0 0 5U3Q 28320959 Human PPARdelta ligand-binding domain in complexed with specific agonist 1 2016-12-03 2017-03-22 Wu, C.C.,Baiga, T.J.,Downes, M.,La Clair, J.J.,Atkins, A.R.,Richard, S.B.,Fan, W.,Stockley-Noel, T.A.,Bowman, M.E.,Noel, J.P.,Evans, R.M. Structural basis for specific ligation of the peroxisome proliferator-activated receptor delta. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5U3X 28320959 Human PPARdelta ligand-binding domain in complexed with specific agonist 8 2016-12-03 2017-03-22 Wu, C.C.,Baiga, T.J.,Downes, M.,La Clair, J.J.,Atkins, A.R.,Richard, S.B.,Fan, W.,Stockley-Noel, T.A.,Bowman, M.E.,Noel, J.P.,Evans, R.M. Structural basis for specific ligation of the peroxisome proliferator-activated receptor delta. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5U3Y 28320959 Human PPARdelta ligand-binding domain in complexed with specific agonist 9 2016-12-03 2017-03-22 Wu, C.C.,Baiga, T.J.,Downes, M.,La Clair, J.J.,Atkins, A.R.,Richard, S.B.,Fan, W.,Stockley-Noel, T.A.,Bowman, M.E.,Noel, J.P.,Evans, R.M. Structural basis for specific ligation of the peroxisome proliferator-activated receptor delta. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5U3Z 28320959 Human PPARdelta ligand-binding domain in complexed with specific agonist 10 2016-12-03 2017-03-22 Wu, C.C.,Baiga, T.J.,Downes, M.,La Clair, J.J.,Atkins, A.R.,Richard, S.B.,Fan, W.,Stockley-Noel, T.A.,Bowman, M.E.,Noel, J.P.,Evans, R.M. Structural basis for specific ligation of the peroxisome proliferator-activated receptor delta. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5U40 28320959 Human PPARdelta ligand-binding domain in complexed with specific agonist 15 2016-12-03 2017-03-22 Wu, C.C.,Baiga, T.J.,Downes, M.,La Clair, J.J.,Atkins, A.R.,Richard, S.B.,Fan, W.,Stockley-Noel, T.A.,Bowman, M.E.,Noel, J.P.,Evans, R.M. Structural basis for specific ligation of the peroxisome proliferator-activated receptor delta. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5U41 28320959 Human PPARdelta ligand-binding domain in complexed with specific agonist 16 2016-12-03 2017-03-22 Wu, C.C.,Baiga, T.J.,Downes, M.,La Clair, J.J.,Atkins, A.R.,Richard, S.B.,Fan, W.,Stockley-Noel, T.A.,Bowman, M.E.,Noel, J.P.,Evans, R.M. Structural basis for specific ligation of the peroxisome proliferator-activated receptor delta. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5U44 28320959 Human PPARdelta ligand-binding domain in complexed with specific agonist 13 2016-12-03 2017-03-22 Wu, C.C.,Baiga, T.J.,Downes, M.,La Clair, J.J.,Atkins, A.R.,Richard, S.B.,Fan, W.,Stockley-Noel, T.A.,Bowman, M.E.,Noel, J.P.,Evans, R.M. Structural basis for specific ligation of the peroxisome proliferator-activated receptor delta. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5U45 28320959 Human PPARdelta ligand-binding domain in complexed with specific agonist 14 2016-12-03 2017-03-22 Wu, C.C.,Baiga, T.J.,Downes, M.,La Clair, J.J.,Atkins, A.R.,Richard, S.B.,Fan, W.,Stockley-Noel, T.A.,Bowman, M.E.,Noel, J.P.,Evans, R.M. Structural basis for specific ligation of the peroxisome proliferator-activated receptor delta. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5T5W 28329704 Structure of an affinity matured lambda-IFN/IFN-lambdaR1/IL-10Rbeta receptor complex 2016-08-31 2017-03-29 Mendoza, J.L.,Schneider, W.M.,Hoffmann, H.H.,Vercauteren, K.,Jude, K.M.,Xiong, A.,Moraga, I.,Horton, T.M.,Glenn, J.S.,de Jong, Y.P.,Rice, C.M.,Garcia, K.C. The IFN-lambda-IFN-lambda R1-IL-10R beta Complex Reveals Structural Features Underlying Type III IFN Functional Plasticity. Immunity 2017 46 379 392 5VB2 28348242 Crystal structure of the NavAb voltage-gated sodium channel in a closed conformation 2017-03-28 2017-04-05 Lenaeus, M.J.,Gamal El-Din, T.M.,Ing, C.,Ramanadane, K.,Pomes, R.,Zheng, N.,Catterall, W.A. Structures of closed and open states of a voltage-gated sodium channel. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5VB8 28348242 Crystal structure of the NavAb voltage-gated sodium channel in an open state 2017-03-28 2017-04-05 Lenaeus, M.J.,Gamal El-Din, T.M.,Ing, C.,Ramanadane, K.,Pomes, R.,Zheng, N.,Catterall, W.A. Structures of closed and open states of a voltage-gated sodium channel. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5KWD 28338692 Computationally Designed Symmetric Homotetramer 2016-07-17 2017-04-12 Fallas, J.A.,Ueda, G.,Sheffler, W.,Nguyen, V.,McNamara, D.E.,Sankaran, B.,Pereira, J.H.,Parmeggiani, F.,Brunette, T.J.,Cascio, D.,Yeates, T.R.,Zwart, P.,Baker, D. Computational design of self-assembling cyclic protein homo-oligomers. Nat Chem 2017 9 353 360 5UEC 28368100 Crystal Structure of CYP2B6 (Y226H/K262R) in complex with myrtenyl bromide. 2016-12-30 2017-04-12 Shah, M.B.,Liu, J.,Zhang, Q.,Stout, C.D.,Halpert, J.R. Halogen-pi Interactions in the Cytochrome P450 Active Site: Structural Insights into Human CYP2B6 Substrate Selectivity. ACS Chem. Biol. 2017 12 1204 1210 5TNW 28376302 Phospholipase C gamma-1 C-terminal SH2 domain 2016-10-14 2017-04-19 McKercher, M.A.,Guan, X.,Tan, Z.,Wuttke, D.S. Multimodal Recognition of Diverse Peptides by the C-Terminal SH2 Domain of Phospholipase C-gamma 1 Protein. Biochemistry 2017 56 2225 2237 5TO4 28376302 Phospholipase C gamma-1 C-terminal SH2 domain, spacegroup P212121 2016-10-16 2017-04-19 McKercher, M.A.,Guan, X.,Tan, Z.,Wuttke, D.S. Multimodal Recognition of Diverse Peptides by the C-Terminal SH2 Domain of Phospholipase C-gamma 1 Protein. Biochemistry 2017 56 2225 2237 5TQS 28376302 Phospholipase C gamma-1 C-terminal SH2 domain bound to a phosphopeptide derived from the receptor tyrosine kinase ErbB2 2016-10-24 2017-04-19 McKercher, M.A.,Guan, X.,Tan, Z.,Wuttke, D.S. Multimodal Recognition of Diverse Peptides by the C-Terminal SH2 Domain of Phospholipase C-gamma 1 Protein. Biochemistry 2017 56 2225 2237 5TQM 27956488 Cinnamoyl-CoA Reductase 1 from Sorghum bicolor in complex with NADP+ 2016-10-24 2017-04-26 Sattler, S.A.,Walker, A.M.,Vermerris, W.,Sattler, S.E.,Kang, C. Structural and Biochemical Characterization of Cinnamoyl-CoA Reductases. Plant Physiol. 2017 173 1031 1044 5JO7 Henbane premnaspirodiene synthase (HPS), also known as Henbane vetispiradiene synthase (HVS) from Hyoscyamus muticus 2016-05-02 2017-05-03 Koo, H.J.,Xu, Y.,Louie, G.V.,Bowman, M.,Noel, J.P. Functional study of terpene synthase from 512 mutant library of henbane premnaspirodiene synthase reveals protein residue interactions To Be Published 0 0 0 0 5UO6 28422508 Structure of human neuronal nitric oxide synthase heme domain in complex with (R)-3-[(2-amino-4-methylquinolin-7-yl)methoxy]-5-(2-(methylamino)propyl)benzonitrile 2017-01-31 2017-05-03 Cinelli, M.A.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Nitrile in the Hole: Discovery of a Small Auxiliary Pocket in Neuronal Nitric Oxide Synthase Leading to the Development of Potent and Selective 2-Aminoquinoline Inhibitors. J. Med. Chem. 2017 60 3958 3978 5UO8 28422508 Structure of human endothelial nitric oxide synthase heme domain in complex with 3-[(2-aminoquinolin-7-yl)methoxy]-5-((methylamino)methyl)benzonitrile 2017-01-31 2017-05-03 Cinelli, M.A.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Nitrile in the Hole: Discovery of a Small Auxiliary Pocket in Neuronal Nitric Oxide Synthase Leading to the Development of Potent and Selective 2-Aminoquinoline Inhibitors. J. Med. Chem. 2017 60 3958 3978 5KBZ 28484029 Structure of the PksA Product Template domain in complex with a phosphopantetheine mimetic 2016-06-03 2017-05-10 Barajas, J.F.,Shakya, G.,Moreno, G.,Rivera, H.,Jackson, D.R.,Topper, C.L.,Vagstad, A.L.,La Clair, J.J.,Townsend, C.A.,Burkart, M.D.,Tsai, S.C. Polyketide mimetics yield structural and mechanistic insights into product template domain function in nonreducing polyketide synthases. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5VPR Crystal Structure of Cysteine desulfurase from Elizabethkingia anophelis with covalently bound pyridoxal phosphate 2017-05-05 2017-05-17 Dranow, D.M.,Horanyi, P.S.,Lorimer, D.D.,Edwards, T.E. Crystal Structure of Cysteine desulfurase from Elizabethkingia anophelis with covalently bound pyridoxal phosphate to be published 0 0 0 0 5VRB Crystal structure of a transketolase from Neisseria gonorrhoeae 2017-05-10 2017-05-17 Edwards, T.E.,Delker, S.L.,Lorimer, D.D.,Seattle Structural Genomics Center for Infectious Disease (SSGCID) Crystal structure of a transketolase from Neisseria gonorrhoeae To Be Published 0 0 0 0 5V83 28581483 Structure of DCN1 bound to NAcM-HIT 2017-03-21 2017-05-24 Scott, D.C.,Hammill, J.T.,Min, J.,Rhee, D.Y.,Connelly, M.,Sviderskiy, V.O.,Bhasin, D.,Chen, Y.,Ong, S.S.,Chai, S.C.,Goktug, A.N.,Huang, G.,Monda, J.K.,Low, J.,Kim, H.S.,Paulo, J.A.,Cannon, J.R.,Shelat, A.A.,Chen, T.,Kelsall, I.R.,Alpi, A.F.,Pagala, V.,Wang, X.,Peng, J.,Singh, B.,Harper, J.W.,Schulman, B.A.,Guy, R.K. Blocking an N-terminal acetylation-dependent protein interaction inhibits an E3 ligase. Nat. Chem. Biol. 2017 13 850 857 5V86 28581483 Structure of DCN1 bound to NAcM-OPT 2017-03-21 2017-05-24 Scott, D.C.,Hammill, J.T.,Min, J.,Rhee, D.Y.,Connelly, M.,Sviderskiy, V.O.,Bhasin, D.,Chen, Y.,Ong, S.S.,Chai, S.C.,Goktug, A.N.,Huang, G.,Monda, J.K.,Low, J.,Kim, H.S.,Paulo, J.A.,Cannon, J.R.,Shelat, A.A.,Chen, T.,Kelsall, I.R.,Alpi, A.F.,Pagala, V.,Wang, X.,Peng, J.,Singh, B.,Harper, J.W.,Schulman, B.A.,Guy, R.K. Blocking an N-terminal acetylation-dependent protein interaction inhibits an E3 ligase. Nat. Chem. Biol. 2017 13 850 857 5V88 28581483 Structure of DCN1 bound to NAcM-COV 2017-03-21 2017-05-24 Scott, D.C.,Hammill, J.T.,Min, J.,Rhee, D.Y.,Connelly, M.,Sviderskiy, V.O.,Bhasin, D.,Chen, Y.,Ong, S.S.,Chai, S.C.,Goktug, A.N.,Huang, G.,Monda, J.K.,Low, J.,Kim, H.S.,Paulo, J.A.,Cannon, J.R.,Shelat, A.A.,Chen, T.,Kelsall, I.R.,Alpi, A.F.,Pagala, V.,Wang, X.,Peng, J.,Singh, B.,Harper, J.W.,Schulman, B.A.,Guy, R.K. Blocking an N-terminal acetylation-dependent protein interaction inhibits an E3 ligase. Nat. Chem. Biol. 2017 13 850 857 5VPS 32841567 Crystal structure of an SDR from Burkholderia ambifaria in complex with NADPH with a TCEP adduct 2017-05-05 2017-05-24 Patel, S.M.,Smith, T.G.,Morton, M.,Stiers, K.M.,Seravalli, J.,Mayclin, S.J.,Edwards, T.E.,Tanner, J.J.,Becker, D.F. Cautionary Tale of Using Tris(alkyl)phosphine Reducing Agents with NAD+-Dependent Enzymes. Biochemistry 2020 0 0 0 5VT6 Crystal structure of Acetoacetyl-CoA Reductase from Burkholderia pseudomallei 1710b complexed with NADP 2017-05-15 2017-05-24 Dranow, D.M.,Davies, D.R.,Lorimer, D.D.,Edwards, T.E. Crystal structure of Acetoacetyl-CoA Reductase from Burkholderia pseudomallei 1710b complexed with NADP To be Published 0 0 0 0 5VCD 28590129 Crystal structure of the cysteine depleted CYP3A4 bound to glycerol 2017-03-31 2017-05-31 Sevrioukova, I.F. High-Level Production and Properties of the Cysteine-Depleted Cytochrome P450 3A4. Biochemistry 2017 56 3058 3067 5VCE 28590129 Crystal structure of the cysteine depleted CYP3A4 bound to ritonavir 2017-03-31 2017-05-31 Sevrioukova, I.F. High-Level Production and Properties of the Cysteine-Depleted Cytochrome P450 3A4. Biochemistry 2017 56 3058 3067 5UEG 28673998 RNA primer-template complex with guanosine dinucleotide G(5')pppp(5')G ligand 2017-01-02 2017-07-05 Zhang, W.,Tam, C.P.,Walton, T.,Fahrenbach, A.C.,Birrane, G.,Szostak, J.W. Insight into the mechanism of nonenzymatic RNA primer extension from the structure of an RNA-GpppG complex. Proc. Natl. Acad. Sci. U.S.A. 2017 114 7659 7664 5WDQ 28686159 H-Ras mutant L120A bound to GMP-PNP at 100K 2017-07-05 2017-07-19 Bandaru, P.,Shah, N.H.,Bhattacharyya, M.,Barton, J.P.,Kondo, Y.,Cofsky, J.C.,Gee, C.L.,Chakraborty, A.K.,Kortemme, T.,Ranganathan, R.,Kuriyan, J. Deconstruction of the Ras switching cycle through saturation mutagenesis. Elife 2017 6 0 0 5WDS 28686159 Choanoflagellate Salpingoeca rosetta Ras with GDP bound 2017-07-05 2017-07-19 Bandaru, P.,Shah, N.H.,Bhattacharyya, M.,Barton, J.P.,Kondo, Y.,Cofsky, J.C.,Gee, C.L.,Chakraborty, A.K.,Kortemme, T.,Ranganathan, R.,Kuriyan, J. Deconstruction of the Ras switching cycle through saturation mutagenesis. Elife 2017 6 0 0 5KZ9 29117524 Crystal structure of the Rous sarcoma virus matrix protein. 2016-07-24 2017-07-26 Doktorova, M.,Heberle, F.A.,Kingston, R.L.,Khelashvili, G.,Cuendet, M.A.,Wen, Y.,Katsaras, J.,Feigenson, G.W.,Vogt, V.M.,Dick, R.A. Cholesterol Promotes Protein Binding by Affecting Membrane Electrostatics and Solvation Properties. Biophys. J. 2017 113 2004 2015 5W7Z Crystal structure of DNA polymerase III subunit beta from Rickettsia conorii 2017-06-21 2017-07-26 Bowatte, K.,Conrady, D.G.,Abendroth, J.,Lorimer, D.D.,Edwards, T.E. Crystal structure of DNA polymerase III subunit beta from Rickettsia conorii to be published 0 0 0 0 5VKT 28606901 Cinnamyl alcohol dehydrogenases (SbCAD4) from Sorghum bicolor (L.) Moench 2017-04-22 2017-08-09 Jun, S.Y.,Walker, A.M.,Kim, H.,Ralph, J.,Vermerris, W.,Sattler, S.E.,Kang, C. The Enzyme Activity and Substrate Specificity of Two Major Cinnamyl Alcohol Dehydrogenases in Sorghum (Sorghum bicolor), SbCAD2 and SbCAD4. Plant Physiol. 2017 174 2128 2145 5WAU 28698372 Crystal Structure of CO-bound Cytochrome c Oxidase determined by Synchrotron X-Ray Crystallography at 100 K 2017-06-27 2017-08-09 Ishigami, I.,Zatsepin, N.A.,Hikita, M.,Conrad, C.E.,Nelson, G.,Coe, J.D.,Basu, S.,Grant, T.D.,Seaberg, M.H.,Sierra, R.G.,Hunter, M.S.,Fromme, P.,Fromme, R.,Yeh, S.R.,Rousseau, D.L. Crystal structure of CO-bound cytochrome c oxidase determined by serial femtosecond X-ray crystallography at room temperature. Proc. Natl. Acad. Sci. U.S.A. 2017 114 8011 8016 5VUI 28776992 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-(((3-Fluorophenyl)amino)methyl)quinolin-2-amine Dihydrochloride 2017-05-19 2017-08-16 Pensa, A.V.,Cinelli, M.A.,Li, H.,Chreifi, G.,Mukherjee, P.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Hydrophilic, Potent, and Selective 7-Substituted 2-Aminoquinolines as Improved Human Neuronal Nitric Oxide Synthase Inhibitors. J. Med. Chem. 2017 60 7146 7165 5VUJ 28776992 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-(((3-(Dimethylamino)benzyl)amino)methyl)quinolin-2-amine 2017-05-19 2017-08-16 Pensa, A.V.,Cinelli, M.A.,Li, H.,Chreifi, G.,Mukherjee, P.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Hydrophilic, Potent, and Selective 7-Substituted 2-Aminoquinolines as Improved Human Neuronal Nitric Oxide Synthase Inhibitors. J. Med. Chem. 2017 60 7146 7165 5VUL 28776992 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-(((4-(Dimethylamino)phenethyl)amino)methyl)quinolin-2-amine 2017-05-19 2017-08-16 Pensa, A.V.,Cinelli, M.A.,Li, H.,Chreifi, G.,Mukherjee, P.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Hydrophilic, Potent, and Selective 7-Substituted 2-Aminoquinolines as Improved Human Neuronal Nitric Oxide Synthase Inhibitors. J. Med. Chem. 2017 60 7146 7165 5VUM 28776992 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-(((3-(Pyridin-3-yl)propyl)amino)methyl)quinolin-2-amine 2017-05-19 2017-08-16 Pensa, A.V.,Cinelli, M.A.,Li, H.,Chreifi, G.,Mukherjee, P.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Hydrophilic, Potent, and Selective 7-Substituted 2-Aminoquinolines as Improved Human Neuronal Nitric Oxide Synthase Inhibitors. J. Med. Chem. 2017 60 7146 7165 5VUO 28776992 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-(((3-(4-Methoxypyridin-3-yl)propyl)amino)methyl)quinolin-2-amine 2017-05-19 2017-08-16 Pensa, A.V.,Cinelli, M.A.,Li, H.,Chreifi, G.,Mukherjee, P.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Hydrophilic, Potent, and Selective 7-Substituted 2-Aminoquinolines as Improved Human Neuronal Nitric Oxide Synthase Inhibitors. J. Med. Chem. 2017 60 7146 7165 5VV0 28776992 Structure of human neuronal nitric oxide synthase heme domain in complex with 7-(((3-(4-Methylpyridin-3-yl)propyl)amino)methyl)quinolin-2-amine 2017-05-19 2017-08-16 Pensa, A.V.,Cinelli, M.A.,Li, H.,Chreifi, G.,Mukherjee, P.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Hydrophilic, Potent, and Selective 7-Substituted 2-Aminoquinolines as Improved Human Neuronal Nitric Oxide Synthase Inhibitors. J. Med. Chem. 2017 60 7146 7165 5VVG 28776992 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 4-(2-(((2-Aminoquinolin-7-yl)methyl)amino)ethyl)-2-chlorobenzonitrile 2017-05-19 2017-08-16 Pensa, A.V.,Cinelli, M.A.,Li, H.,Chreifi, G.,Mukherjee, P.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Hydrophilic, Potent, and Selective 7-Substituted 2-Aminoquinolines as Improved Human Neuronal Nitric Oxide Synthase Inhibitors. J. Med. Chem. 2017 60 7146 7165 5WBC 27385206 Designed Artificial Cupredoxins - WT 2017-06-28 2017-08-16 Mann, S.I.,Heinisch, T.,Weitz, A.C.,Hendrich, M.P.,Ward, T.R.,Borovik, A.S. Modular Artificial Cupredoxins. J. Am. Chem. Soc. 2016 138 9073 9076 5VUX 28776992 Structure of human neuronal nitric oxide synthase heme domain in complex with 7-(((4-(Dimethylamino)benzyl)amino)methyl)quinolin-2-amine 2017-05-19 2017-08-23 Pensa, A.V.,Cinelli, M.A.,Li, H.,Chreifi, G.,Mukherjee, P.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Hydrophilic, Potent, and Selective 7-Substituted 2-Aminoquinolines as Improved Human Neuronal Nitric Oxide Synthase Inhibitors. J. Med. Chem. 2017 60 7146 7165 5VUZ 28776992 Structure of human neuronal nitric oxide synthase heme domain in complex with 7-(((3-(Pyridin-3-yl)propyl)amino)methyl)quinolin-2-amine 2017-05-19 2017-08-23 Pensa, A.V.,Cinelli, M.A.,Li, H.,Chreifi, G.,Mukherjee, P.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Hydrophilic, Potent, and Selective 7-Substituted 2-Aminoquinolines as Improved Human Neuronal Nitric Oxide Synthase Inhibitors. J. Med. Chem. 2017 60 7146 7165 5WIE 28846092 Crystal structure of a Kv1.2-2.1 chimera K+ channel V406W mutant in an inactivated state 2017-07-19 2017-08-30 Pau, V.,Zhou, Y.,Ramu, Y.,Xu, Y.,Lu, Z. Crystal structure of an inactivated mutant mammalian voltage-gated K(+) channel. Nat. Struct. Mol. Biol. 2017 24 857 865 5U73 28784760 Crystal structure of human Niemann-Pick C1 protein 2016-12-11 2017-09-27 Li, X.,Lu, F.,Trinh, M.N.,Schmiege, P.,Seemann, J.,Wang, J.,Blobel, G. 3.3 angstrom structure of Niemann-Pick C1 protein reveals insights into the function of the C-terminal luminal domain in cholesterol transport. Proc. Natl. Acad. Sci. U.S.A. 2017 114 9116 9121 5W0J 28876052 Antiparallel coiled coil hexamer formed by de novo peptides (ACC-Hex2). 2017-05-30 2017-10-04 Spencer, R.K.,Hochbaum, A.I. The Phe-Ile Zipper: A Specific Interaction Motif Drives Antiparallel Coiled-Coil Hexamer Formation. Biochemistry 2017 56 5300 5308 6AXF 28952923 Structure of RasGRP2 in complex with Rap1B 2017-09-06 2017-10-11 Vercoulen, Y.,Kondo, Y.,Iwig, J.S.,Janssen, A.,White, K.A.,Amini, M.,Barber, D.L.,Kuriyan, J.,Roose, J.P. A histidine pH sensor regulates activation of the Ras-specific guanine nucleotide exchange factor RasGRP1. Elife 2017 6 0 0 6AXG 28952923 Structure of RasGRP4 in complex with HRas 2017-09-06 2017-10-11 Vercoulen, Y.,Kondo, Y.,Iwig, J.S.,Janssen, A.,White, K.A.,Amini, M.,Barber, D.L.,Kuriyan, J.,Roose, J.P. A histidine pH sensor regulates activation of the Ras-specific guanine nucleotide exchange factor RasGRP1. Elife 2017 6 0 0 6B2A 28952925 Crystal structure of fluoride channel Fluc Ec2 F80M Mutant 2017-09-19 2017-10-11 Last, N.B.,Sun, S.,Pham, M.C.,Miller, C. Molecular determinants of permeation in a fluoride-specific ion channel. Elife 2017 6 0 0 6B2D 28952925 Crystal structure of fluoride channel Fluc Ec2 T114S Mutant 2017-09-19 2017-10-11 Last, N.B.,Sun, S.,Pham, M.C.,Miller, C. Molecular determinants of permeation in a fluoride-specific ion channel. Elife 2017 6 0 0 5TGP DNA 8mer containing two 2SeT modifications 2016-09-28 2017-10-18 Zhang, W.,Huang, Z. DNA 8mer containing two 2SeT modifications To Be Published 0 0 0 0 5W4H 29028351 X-ray crystallographic structure of a beta-hairpin peptide mimic derived from Abeta 16-36. Synchrotron data set. (ORN)KLV(MEA)FAE(ORN)AIIGLMV. 2017-06-11 2017-11-22 Kreutzer, A.G.,Spencer, R.K.,McKnelly, K.J.,Yoo, S.,Hamza, I.L.,Salveson, P.J.,Nowick, J.S. A Hexamer of a Peptide Derived from A beta 16-36. Biochemistry 2017 56 6061 6071 5WBA 29117678 Peroxide Activation Regulated by Hydrogen Bonds within Artificial Cu Proteins - WT 2017-06-28 2017-11-22 Mann, S.I.,Heinisch, T.,Ward, T.R.,Borovik, A.S. Peroxide Activation Regulated by Hydrogen Bonds within Artificial Cu Proteins. J. Am. Chem. Soc. 2017 139 17289 17292 5U0Q RNA-DNA heptamer duplex with one 2'-5'-linkage 2016-11-26 2017-11-29 Luo, Z.,Sheng, J.,Wang, R. RNA-DNA heptamer duplex with one 2'-5'-linkage To Be Published 0 0 0 0 6B3X 29186539 Crystal structure of CstF-50 in complex with CstF-77 2017-09-25 2017-11-29 Yang, W.,Hsu, P.L.,Yang, F.,Song, J.E.,Varani, G. Reconstitution of the CstF complex unveils a regulatory role for CstF-50 in recognition of 3'-end processing signals. Nucleic Acids Res. 2018 46 493 503 5VU5 29180809 TNA polymerase, apo 2017-05-18 2017-12-06 Chim, N.,Shi, C.,Sau, S.P.,Nikoomanzar, A.,Chaput, J.C. Structural basis for TNA synthesis by an engineered TNA polymerase. Nat Commun 2017 8 1810 1810 5VU8 29180809 TNA polymerase, closed ternary complex 2017-05-18 2017-12-06 Chim, N.,Shi, C.,Sau, S.P.,Nikoomanzar, A.,Chaput, J.C. Structural basis for TNA synthesis by an engineered TNA polymerase. Nat Commun 2017 8 1810 1810 5VU9 29180809 TNA polymerase, translocated product 2017-05-18 2017-12-06 Chim, N.,Shi, C.,Sau, S.P.,Nikoomanzar, A.,Chaput, J.C. Structural basis for TNA synthesis by an engineered TNA polymerase. Nat Commun 2017 8 1810 1810 5UC5 29199980 Chalcone synthase from Malus domestica 2016-12-21 2017-12-13 Stewart, C.,Woods, K.,Macias, G.,Allan, A.C.,Hellens, R.P.,Noel, J.P. Molecular architectures of benzoic acid-specific type III polyketide synthases. Acta Crystallogr D Struct Biol 2017 73 1007 1019 5UCO 29199980 Benzophenone synthase from Hypericum androsaemum 2016-12-22 2017-12-13 Stewart, C.,Woods, K.,Macias, G.,Allan, A.C.,Hellens, R.P.,Noel, J.P. Molecular architectures of benzoic acid-specific type III polyketide synthases. Acta Crystallogr D Struct Biol 2017 73 1007 1019 5W8Q 29199980 Crystal structure of biphenyl synthase from Malus domestica 2017-06-22 2017-12-13 Stewart, C.,Woods, K.,Macias, G.,Allan, A.C.,Hellens, R.P.,Noel, J.P. Molecular architectures of benzoic acid-specific type III polyketide synthases. Acta Crystallogr D Struct Biol 2017 73 1007 1019 5WC4 29199980 Crystal structure of biphenyl synthase from Malus domestic complexed with benzoyl-CoA 2017-06-29 2017-12-13 Stewart, C.,Woods, K.,Macias, G.,Allan, A.C.,Hellens, R.P.,Noel, J.P. Molecular architectures of benzoic acid-specific type III polyketide synthases. Acta Crystallogr D Struct Biol 2017 73 1007 1019 5WE0 29149597 Structural Basis for Shelterin Bridge Assembly 2017-07-06 2017-12-20 Kim, J.K.,Liu, J.,Hu, X.,Yu, C.,Roskamp, K.,Sankaran, B.,Huang, L.,Komives, E.A.,Qiao, F. Structural Basis for Shelterin Bridge Assembly. Mol. Cell 2017 68 698 0 5UAZ Crystal structure of the yeast nucleoporin 2016-12-20 2017-12-27 Blus, B.J.,Blobel, G. Crystal structure of the yeast nucleoporin To Be Published 0 0 0 0 6AVV 29259199 Crystal structure of Arabidopsis thaliana SOBER1 2017-09-04 2017-12-27 Burger, M.,Willige, B.C.,Chory, J. A hydrophobic anchor mechanism defines a deacetylase family that suppresses host response against YopJ effectors. Nat Commun 2017 8 2201 2201 6AVW 29259199 Crystal structure of Arabidopsis thaliana SOBER1 L63A 2017-09-04 2017-12-27 Burger, M.,Willige, B.C.,Chory, J. A hydrophobic anchor mechanism defines a deacetylase family that suppresses host response against YopJ effectors. Nat Commun 2017 8 2201 2201 6AVX 29259199 Crystal structure of Arabidopsis thaliana SOBER1 F65L 2017-09-04 2017-12-27 Burger, M.,Willige, B.C.,Chory, J. A hydrophobic anchor mechanism defines a deacetylase family that suppresses host response against YopJ effectors. Nat Commun 2017 8 2201 2201 6AVY 29259199 Crystal structure of Zea mays acyl-protein thioesterase 2 2017-09-04 2017-12-27 Burger, M.,Willige, B.C.,Chory, J. A hydrophobic anchor mechanism defines a deacetylase family that suppresses host response against YopJ effectors. Nat Commun 2017 8 2201 2201 5KOF 31209348 Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and Acyl Carrier Protein, AcpP 2016-06-30 2018-01-24 Milligan, J.C.,Lee, D.J.,Jackson, D.R.,Schaub, A.J.,Beld, J.,Barajas, J.F.,Hale, J.J.,Luo, R.,Burkart, M.D.,Tsai, S.C. Molecular basis for interactions between an acyl carrier protein and a ketosynthase. Nat.Chem.Biol. 2019 15 669 671 5UM4 Crystal structure of the F255A mutant Kir3.1 cytoplasmic pore domain 2017-01-26 2018-01-31 Meinke, G.,Bohm, A.,Noujaim, S. Crystal structure of the F255A mutant Kir3.1 cytoplasmic pore domain To Be Published 0 0 0 0 6ARK 29320178 Crystal Structure of compound 10 covalently bound to K-Ras G12C 2017-08-22 2018-01-31 Nnadi, C.I.,Jenkins, M.L.,Gentile, D.R.,Bateman, L.A.,Zaidman, D.,Balius, T.E.,Nomura, D.K.,Burke, J.E.,Shokat, K.M.,London, N. Novel K-Ras G12C Switch-II Covalent Binders Destabilize Ras and Accelerate Nucleotide Exchange. J Chem Inf Model 2018 58 464 471 6ARK 29320178 Crystal Structure of compound 10 covalently bound to K-Ras G12C 2017-08-22 2018-01-31 Nnadi, C.I.,Jenkins, M.L.,Gentile, D.R.,Bateman, L.A.,Zaidman, D.,Balius, T.E.,Nomura, D.K.,Burke, J.E.,Shokat, K.M.,London, N. Novel K-Ras G12C Switch-II Covalent Binders Destabilize Ras and Accelerate Nucleotide Exchange. J Chem Inf Model 2018 58 464 471 5UKG 29338710 Crystal Structure of the genetically encoded calcium indicator K-GECO 2017-01-22 2018-02-07 Shen, Y.,Dana, H.,Abdelfattah, A.S.,Patel, R.,Shea, J.,Molina, R.S.,Rawal, B.,Rancic, V.,Chang, Y.F.,Wu, L.,Chen, Y.,Qian, Y.,Wiens, M.D.,Hambleton, N.,Ballanyi, K.,Hughes, T.E.,Drobizhev, M.,Kim, D.S.,Koyama, M.,Schreiter, E.R.,Campbell, R.E. A genetically encoded Ca2+indicator based on circularly permutated sea anemone red fluorescent protein eqFP578. BMC Biol. 2018 16 9 9 6C9L 29944822 MEF2B Apo Protein Structure 2018-01-26 2018-02-07 Lei, X.,Shi, H.,Kou, Y.,Rajashekar, N.,Wu, F.,Sen, C.,Xu, J.,Chen, L. Crystal Structure of Apo MEF2B Reveals New Insights in DNA Binding and Cofactor Interaction. Biochemistry 2018 57 4047 4051 6BX4 29393634 The crystal structure of fluoride channel Fluc Ec2 with Monobody S9 2017-12-16 2018-02-14 Turman, D.L.,Cheloff, A.Z.,Corrado, A.D.,Nathanson, J.T.,Miller, C. Molecular Interactions between a Fluoride Ion Channel and Synthetic Protein Blockers. Biochemistry 2018 57 1212 1218 6AUC 29401385 Artificial metalloproteins containing a Co4O4 active site - 2xm-Sav 2017-08-31 2018-02-28 Olshansky, L.,Huerta-Lavorie, R.,Nguyen, A.I.,Vallapurackal, J.,Furst, A.,Tilley, T.D.,Borovik, A.S. Artificial Metalloproteins Containing Co J. Am. Chem. Soc. 2018 140 2739 2742 6BLO 29487211 Pol II elongation complex with an abasic lesion at i+1 position 2017-11-10 2018-02-28 Wang, W.,Walmacq, C.,Chong, J.,Kashlev, M.,Wang, D. Structural basis of transcriptional stalling and bypass of abasic DNA lesion by RNA polymerase II. Proc. Natl. Acad. Sci. U.S.A. 2018 115 0 0 6B87 29496880 Crystal structure of transmembrane protein TMHC2_E 2017-10-05 2018-03-14 Lu, P.,Min, D.,DiMaio, F.,Wei, K.Y.,Vahey, M.D.,Boyken, S.E.,Chen, Z.,Fallas, J.A.,Ueda, G.,Sheffler, W.,Mulligan, V.K.,Xu, W.,Bowie, J.U.,Baker, D. Accurate computational design of multipass transmembrane proteins. Science 2018 359 1042 1046 6BK5 29498112 Inactive choanoflagellate E3 ubiquitin ligase Cbl TKB 2017-11-07 2018-03-14 Amacher, J.F.,Hobbs, H.T.,Cantor, A.C.,Shah, L.,Rivero, M.J.,Mulchand, S.A.,Kuriyan, J. Phosphorylation control of the ubiquitin ligase Cbl is conserved in choanoflagellates. Protein Sci. 2018 27 923 932 5USN 29681468 Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssRNA/ssDNA chimera (rGrGrUTACGGT) 2017-02-13 2018-04-18 Lloyd, N.R.,Wuttke, D.S. Discrimination against RNA Backbones by a ssDNA Binding Protein. Structure 2018 26 722 0 5USO 29681468 Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssRNA/ssDNA chimera (GGTTACrGrGrU) 2017-02-13 2018-04-18 Lloyd, N.R.,Wuttke, D.S. Discrimination against RNA Backbones by a ssDNA Binding Protein. Structure 2018 26 722 0 5XJL 21816274 Crystal Structure of the Gemin2-binding domain of SMN, Gemin2 in Complex with SmD1/D2/F/E/G from Human 2017-05-02 2018-05-02 Zhang, R.,So, B.R.,Li, P.,Yong, J.,Glisovic, T.,Wan, L.,Dreyfuss, G. Structure of a key intermediate of the SMN complex reveals Gemin2's crucial function in snRNP assembly Cell 2011 146 384 395 5WKR 29686356 Crystal structure of chalcone isomerase engineered from ancestral inference complexed with naringenin (ancCC) 2017-07-25 2018-05-09 Kaltenbach, M.,Burke, J.R.,Dindo, M.,Pabis, A.,Munsberg, F.S.,Rabin, A.,Kamerlin, S.C.L.,Noel, J.P.,Tawfik, D.S. Evolution of chalcone isomerase from a noncatalytic ancestor. Nat. Chem. Biol. 2018 14 548 555 5WKS 29686356 Crystal structure of chalcone isomerase engineered from ancestral inference complexed with naringenin (ancR1) 2017-07-25 2018-05-09 Kaltenbach, M.,Burke, J.R.,Dindo, M.,Pabis, A.,Munsberg, F.S.,Rabin, A.,Kamerlin, S.C.L.,Noel, J.P.,Tawfik, D.S. Evolution of chalcone isomerase from a noncatalytic ancestor. Nat. Chem. Biol. 2018 14 548 555 5WL3 29686356 Crystal structure of chalcone isomerase engineered from ancestral inference (ancR2) 2017-07-25 2018-05-09 Kaltenbach, M.,Burke, J.R.,Dindo, M.,Pabis, A.,Munsberg, F.S.,Rabin, A.,Kamerlin, S.C.L.,Noel, J.P.,Tawfik, D.S. Evolution of chalcone isomerase from a noncatalytic ancestor. Nat. Chem. Biol. 2018 14 548 555 5WL4 29686356 Crystal structure of chalcone isomerase engineered from ancestral inference (ancR3) 2017-07-25 2018-05-09 Kaltenbach, M.,Burke, J.R.,Dindo, M.,Pabis, A.,Munsberg, F.S.,Rabin, A.,Kamerlin, S.C.L.,Noel, J.P.,Tawfik, D.S. Evolution of chalcone isomerase from a noncatalytic ancestor. Nat. Chem. Biol. 2018 14 548 555 5WL5 29686356 Crystal structure of chalcone isomerase engineered from ancestral inference (ancR5) 2017-07-25 2018-05-09 Kaltenbach, M.,Burke, J.R.,Dindo, M.,Pabis, A.,Munsberg, F.S.,Rabin, A.,Kamerlin, S.C.L.,Noel, J.P.,Tawfik, D.S. Evolution of chalcone isomerase from a noncatalytic ancestor. Nat. Chem. Biol. 2018 14 548 555 5WL6 29686356 Crystal structure of chalcone isomerase engineered from ancestral inference (AncR7) 2017-07-25 2018-05-09 Kaltenbach, M.,Burke, J.R.,Dindo, M.,Pabis, A.,Munsberg, F.S.,Rabin, A.,Kamerlin, S.C.L.,Noel, J.P.,Tawfik, D.S. Evolution of chalcone isomerase from a noncatalytic ancestor. Nat. Chem. Biol. 2018 14 548 555 5WL7 29686356 Crystal structure of chalcone isomerase engineered from ancestral inference (ancCHI*) 2017-07-25 2018-05-09 Kaltenbach, M.,Burke, J.R.,Dindo, M.,Pabis, A.,Munsberg, F.S.,Rabin, A.,Kamerlin, S.C.L.,Noel, J.P.,Tawfik, D.S. Evolution of chalcone isomerase from a noncatalytic ancestor. Nat. Chem. Biol. 2018 14 548 555 5WL8 29686356 Crystal structure of chalcone isomerase engineered from ancestral inference (epR4) 2017-07-25 2018-05-09 Kaltenbach, M.,Burke, J.R.,Dindo, M.,Pabis, A.,Munsberg, F.S.,Rabin, A.,Kamerlin, S.C.L.,Noel, J.P.,Tawfik, D.S. Evolution of chalcone isomerase from a noncatalytic ancestor. Nat. Chem. Biol. 2018 14 548 555 6CGN 29712847 X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit dAMP-bound (pH 7) 2018-02-20 2018-05-09 Parker, M.J.,Maggiolo, A.O.,Thomas, W.C.,Kim, A.,Meisburger, S.P.,Ando, N.,Boal, A.K.,Stubbe, J. An endogenous dAMP ligand inBacillus subtilisclass Ib RNR promotes assembly of a noncanonical dimer for regulation by dATP. Proc. Natl. Acad. Sci. U.S.A. 2018 115 0 0 6C1E 29769724 NavAb NormoPP mutant 2018-01-04 2018-05-16 Jiang, D.,Gamal El-Din, T.M.,Ing, C.,Lu, P.,Pomes, R.,Zheng, N.,Catterall, W.A. Structural basis for gating pore current in periodic paralysis. Nature 2018 557 590 594 6C1K 29769724 HypoPP mutant with ligand1 2018-01-04 2018-05-16 Jiang, D.,Gamal El-Din, T.M.,Ing, C.,Lu, P.,Pomes, R.,Zheng, N.,Catterall, W.A. Structural basis for gating pore current in periodic paralysis. Nature 2018 557 590 594 6C1M 29769724 NavAb NormoPP mutant 2018-01-04 2018-05-16 Jiang, D.,Gamal El-Din, T.M.,Ing, C.,Lu, P.,Pomes, R.,Zheng, N.,Catterall, W.A. Structural basis for gating pore current in periodic paralysis. Nature 2018 557 590 594 6C1P 29769724 HypoPP mutant 2018-01-05 2018-05-16 Jiang, D.,Gamal El-Din, T.M.,Ing, C.,Lu, P.,Pomes, R.,Zheng, N.,Catterall, W.A. Structural basis for gating pore current in periodic paralysis. Nature 2018 557 590 594 6C0T 29769318 Crystal structure of cGMP-dependent protein kinase Ialpha (PKG Ialpha) catalytic domain bound with N46 2018-01-02 2018-05-30 Qin, L.,Sankaran, B.,Aminzai, S.,Casteel, D.E.,Kim, C. Structural basis for selective inhibition of human PKG I alpha by the balanol-like compound N46. J. Biol. Chem. 2018 293 10985 10992 6C0U 29769318 Crystal structure of cAMP-dependent protein kinase Calpha subunit bound with N46 2018-01-02 2018-05-30 Qin, L.,Sankaran, B.,Aminzai, S.,Casteel, D.E.,Kim, C. Structural basis for selective inhibition of human PKG I alpha by the balanol-like compound N46. J. Biol. Chem. 2018 293 10985 10992 6C8D 29851379 RNA-dGMP complex with Mg ion 2018-01-24 2018-05-30 Zhang, W.,Walton, T.,Li, L.,Szostak, J.W. Crystallographic observation of nonenzymatic RNA primer extension. Elife 2018 7 0 0 6C8J 29851379 RNA-activated 2-AIpG monomer complex, 15 min soaking 2018-01-24 2018-05-30 Zhang, W.,Walton, T.,Li, L.,Szostak, J.W. Crystallographic observation of nonenzymatic RNA primer extension. Elife 2018 7 0 0 5W4U 28933854 Pol II elongation complex with an N6-methyladenine-containing template 2017-06-13 2018-06-20 Wang, W.,Xu, L.,Hu, L.,Chong, J.,He, C.,Wang, D. Epigenetic DNA Modification N6-Methyladenine Causes Site-Specific RNA Polymerase II Transcriptional Pausing. J.Am.Chem.Soc. 2017 139 14436 14442 6CPE 29901437 Structure of apo, dephosphorylated Aurora A (122-403) in an active conformation 2018-03-13 2018-06-27 Pitsawong, W.,Buosi, V.,Otten, R.,Agafonov, R.V.,Zorba, A.,Kern, N.,Kutter, S.,Kern, G.,Padua, R.A.,Meniche, X.,Kern, D. Dynamics of human protein kinase Aurora A linked to drug selectivity. Elife 2018 7 0 0 6CPG 29901437 Structure of dephosphorylated Aurora A (122-403) in complex with inhibiting monobody and AT9283 in an inactive conformation 2018-03-13 2018-06-27 Pitsawong, W.,Buosi, V.,Otten, R.,Agafonov, R.V.,Zorba, A.,Kern, N.,Kutter, S.,Kern, G.,Padua, R.A.,Meniche, X.,Kern, D. Dynamics of human protein kinase Aurora A linked to drug selectivity. Elife 2018 7 0 0 5UTZ 29942088 Human IL-2/Fab complex 2017-02-15 2018-07-11 Trotta, E.,Bessette, P.H.,Silveria, S.L.,Ely, L.K.,Jude, K.M.,Le, D.T.,Holst, C.R.,Coyle, A.,Potempa, M.,Lanier, L.L.,Garcia, K.C.,Crellin, N.K.,Rondon, I.J.,Bluestone, J.A. A human anti-IL-2 antibody that potentiates regulatory T cells by a structure-based mechanism. Nat. Med. 2018 24 1005 1014 6AUS 29091437 Structure of rat neuronal nitric oxide synthase heme domain in complex with 3-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)-5-(3-(methylamino)propyl)benzonitrile 2017-09-01 2018-07-11 Do, H.T.,Wang, H.Y.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Improvement of Cell Permeability of Human Neuronal Nitric Oxide Synthase Inhibitors Using Potent and Selective 2-Aminopyridine-Based Scaffolds with a Fluorobenzene Linker. J. Med. Chem. 2017 60 9360 9375 6AUX 29091437 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(2-(5-Fluoro-3'-((methylamino)methyl)-[1,1'-biphenyl]-3-yl)ethyl)-4-methylpyridin-2-amine 2017-09-01 2018-07-11 Do, H.T.,Wang, H.Y.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Improvement of Cell Permeability of Human Neuronal Nitric Oxide Synthase Inhibitors Using Potent and Selective 2-Aminopyridine-Based Scaffolds with a Fluorobenzene Linker. J. Med. Chem. 2017 60 9360 9375 6AV0 29091437 Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with 3-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)-5-(3-(methylamino)propyl)benzonitrile 2017-09-01 2018-07-11 Do, H.T.,Wang, H.Y.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Improvement of Cell Permeability of Human Neuronal Nitric Oxide Synthase Inhibitors Using Potent and Selective 2-Aminopyridine-Based Scaffolds with a Fluorobenzene Linker. J. Med. Chem. 2017 60 9360 9375 6AV2 29091437 Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with 6-(3-(3-(dimethylamino)propyl)-5-(trifluoromethyl)phenethyl)-4-methylpyridin-2-amine 2017-09-01 2018-07-11 Do, H.T.,Wang, H.Y.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Improvement of Cell Permeability of Human Neuronal Nitric Oxide Synthase Inhibitors Using Potent and Selective 2-Aminopyridine-Based Scaffolds with a Fluorobenzene Linker. J. Med. Chem. 2017 60 9360 9375 6DBY 30127411 Crystal structure of Nudix 1 from Arabidopsis thaliana 2018-05-03 2018-09-19 Henry, L.K.,Thomas, S.T.,Widhalm, J.R.,Lynch, J.H.,Davis, T.C.,Kessler, S.A.,Bohlmann, J.,Noel, J.P.,Dudareva, N. Contribution of isopentenyl phosphate to plant terpenoid metabolism. Nat Plants 2018 4 721 729 6DBZ 30127411 Crystal structure of Nudix 1 from Arabidopsis thaliana complexed with isopentenyl diphosphate 2018-05-03 2018-09-19 Henry, L.K.,Thomas, S.T.,Widhalm, J.R.,Lynch, J.H.,Davis, T.C.,Kessler, S.A.,Bohlmann, J.,Noel, J.P.,Dudareva, N. Contribution of isopentenyl phosphate to plant terpenoid metabolism. Nat Plants 2018 4 721 729 6DLK Crystal structure of DNA polymerase III subunit beta from Rickettsia rickettsii 2018-06-01 2018-10-03 Conrady, D.G.,Dranow, D.M.,Lorimer, D.D.,Edwards, T.E. Crystal structure of DNA polymerase III subunit beta from Rickettsia rickettsii to be published 0 0 0 0 6BUH 30283133 Crystal structure of a membrane protein, crystal form II 2017-12-10 2018-10-10 Ma, D.,Wang, Z.,Merrikh, C.N.,Lang, K.S.,Lu, P.,Li, X.,Merrikh, H.,Rao, Z.,Xu, W. Crystal structure of a membrane-bound O-acyltransferase. Nature 2018 562 286 290 6BUI 30283133 Crystal structure of a membrane protein, crystal form III 2017-12-10 2018-10-10 Ma, D.,Wang, Z.,Merrikh, C.N.,Lang, K.S.,Lu, P.,Li, X.,Merrikh, H.,Rao, Z.,Xu, W. Crystal structure of a membrane-bound O-acyltransferase. Nature 2018 562 286 290 6DXB 30291143 Crystal structure of chalcone synthase from Arabidopsis thaliana 2018-06-28 2018-10-17 Liou, G.,Chiang, Y.C.,Wang, Y.,Weng, J.K. Mechanistic basis for the evolution of chalcone synthase catalytic cysteine reactivity in land plants. J. Biol. Chem. 2018 293 18601 18612 6DXC 30291143 Crystal structure of chalcone synthase from Selaginella moellendorffii - S340C mutant 2018-06-28 2018-10-17 Liou, G.,Chiang, Y.C.,Wang, Y.,Weng, J.K. Mechanistic basis for the evolution of chalcone synthase catalytic cysteine reactivity in land plants. J. Biol. Chem. 2018 293 18601 18612 6DXD 30291143 Crystal structure of chalcone synthase from Arabidopsis thaliana - C347S mutant 2018-06-28 2018-10-17 Liou, G.,Chiang, Y.C.,Wang, Y.,Weng, J.K. Mechanistic basis for the evolution of chalcone synthase catalytic cysteine reactivity in land plants. J. Biol. Chem. 2018 293 18601 18612 6DSU 30338759 Bst DNA polymerase I pre-insertion complex structure 2018-06-14 2018-10-31 Chim, N.,Jackson, L.N.,Trinh, A.M.,Chaput, J.C. Crystal structures of DNA polymerase I capture novel intermediates in the DNA synthesis pathway. Elife 2018 7 0 0 6DSV 30338759 Bst DNA polymerase I post-chemistry (n+2) structure 2018-06-14 2018-10-31 Chim, N.,Jackson, L.N.,Trinh, A.M.,Chaput, J.C. Crystal structures of DNA polymerase I capture novel intermediates in the DNA synthesis pathway. Elife 2018 7 0 0 6DSX 30338759 Bst DNA polymerase I post-chemistry (n+1 with dATP soak) structure 2018-06-14 2018-10-31 Chim, N.,Jackson, L.N.,Trinh, A.M.,Chaput, J.C. Crystal structures of DNA polymerase I capture novel intermediates in the DNA synthesis pathway. Elife 2018 7 0 0 6CMP 30375376 Closed structure of inactive SHP2 mutant C459E 2018-03-06 2018-11-14 Padua, R.A.P.,Sun, Y.,Marko, I.,Pitsawong, W.,Stiller, J.B.,Otten, R.,Kern, D. Mechanism of activating mutations and allosteric drug inhibition of the phosphatase SHP2. Nat Commun 2018 9 4507 4507 6CMQ 30375376 Structure of human SHP2 without N-SH2 domain 2018-03-06 2018-11-14 Padua, R.A.P.,Sun, Y.,Marko, I.,Pitsawong, W.,Stiller, J.B.,Otten, R.,Kern, D. Mechanism of activating mutations and allosteric drug inhibition of the phosphatase SHP2. Nat Commun 2018 9 4507 4507 6BRO 30464344 Crystal structure of ASK1-D3 ubiquitin ligase form1 2017-11-30 2018-11-21 Shabek, N.,Ticchiarelli, F.,Mao, H.,Hinds, T.R.,Leyser, O.,Zheng, N. Structural plasticity of D3-D14 ubiquitin ligase in strigolactone signalling. Nature 2018 563 652 656 6BRP 30464344 F-box protein form 2 2017-11-30 2018-11-21 Shabek, N.,Ticchiarelli, F.,Mao, H.,Hinds, T.R.,Leyser, O.,Zheng, N. Structural plasticity of D3-D14 ubiquitin ligase in strigolactone signalling. Nature 2018 563 652 656 6BRQ 30464344 Crystal structure of rice ASK1-D3 ubiquitin ligase complex crystal form 3 2017-11-30 2018-11-21 Shabek, N.,Ticchiarelli, F.,Mao, H.,Hinds, T.R.,Leyser, O.,Zheng, N. Structural plasticity of D3-D14 ubiquitin ligase in strigolactone signalling. Nature 2018 563 652 656 6BRT 30464344 F-box protein CTH with hydrolase 2017-12-01 2018-11-21 Shabek, N.,Ticchiarelli, F.,Mao, H.,Hinds, T.R.,Leyser, O.,Zheng, N. Structural plasticity of D3-D14 ubiquitin ligase in strigolactone signalling. Nature 2018 563 652 656 6CY9 30509975 SA11 Rotavirus NSP2 with disulfide bridge 2018-04-05 2018-12-05 Criglar, J.M.,Anish, R.,Hu, L.,Crawford, S.E.,Sankaran, B.,Prasad, B.V.V.,Estes, M.K. Phosphorylation cascade regulates the formation and maturation of rotaviral replication factories. Proc. Natl. Acad. Sci. U.S.A. 2018 115 0 0 6CYA 30509975 Rotavirus SA11 NSP2 S313A mutant 2018-04-05 2018-12-05 Criglar, J.M.,Anish, R.,Hu, L.,Crawford, S.E.,Sankaran, B.,Prasad, B.V.V.,Estes, M.K. Phosphorylation cascade regulates the formation and maturation of rotaviral replication factories. Proc. Natl. Acad. Sci. U.S.A. 2018 115 0 0 6MVV 30518562 NavAb voltage-gated sodium channel, I217C/F203A 2018-10-28 2018-12-05 Gamal El-Din, T.M.,Lenaeus, M.J.,Zheng, N.,Catterall, W.A. Fenestrations control resting-state block of a voltage-gated sodium channel. Proc. Natl. Acad. Sci. U.S.A. 2018 115 13111 13116 6MVW 30518562 NavAb voltage-gated sodium channel, I217C/F203W 2018-10-28 2018-12-05 Gamal El-Din, T.M.,Lenaeus, M.J.,Zheng, N.,Catterall, W.A. Fenestrations control resting-state block of a voltage-gated sodium channel. Proc. Natl. Acad. Sci. U.S.A. 2018 115 13111 13116 6MVX 30518562 NavAb Voltage-gated Sodium Channel, I217C, in Complex with Class 1C Anti-arrhythmic Flecainide 2018-10-28 2018-12-05 Gamal El-Din, T.M.,Lenaeus, M.J.,Zheng, N.,Catterall, W.A. Fenestrations control resting-state block of a voltage-gated sodium channel. Proc. Natl. Acad. Sci. U.S.A. 2018 115 13111 13116 6MVY 30518562 NavAb voltage-gated sodium channel, residues 1-226, crystallized in the presence of Class 1B Anti-arrhythmic drug Lidocaine 2018-10-28 2018-12-05 Gamal El-Din, T.M.,Lenaeus, M.J.,Zheng, N.,Catterall, W.A. Fenestrations control resting-state block of a voltage-gated sodium channel. Proc. Natl. Acad. Sci. U.S.A. 2018 115 13111 13116 6C89 30375382 NDM-1 Beta-Lactamase Exhibits Differential Active Site Sequence Requirements for the Hydrolysis of Penicillin versus Carbapenem Antibiotics 2018-01-24 2018-12-12 Sun, Z.,Hu, L.,Sankaran, B.,Prasad, B.V.V.,Palzkill, T. Differential active site requirements for NDM-1 beta-lactamase hydrolysis of carbapenem versus penicillin and cephalosporin antibiotics. Nat Commun 2018 9 4524 4524 6DSZ 30564455 Crystal structure of DDB1 in complex with DET1- and DDB1-associated protein 1 (DDA1) 2018-06-14 2018-12-12 Shabek, N.,Ruble, J.,Waston, C.J.,Garbutt, K.C.,Hinds, T.R.,Li, T.,Zheng, N. Structural insights into DDA1 function as a core component of the CRL4-DDB1 ubiquitin ligase. Cell Discov 2018 4 67 67 6DM9 30568301 DHD15_extended 2018-06-04 2018-12-19 Chen, Z.,Boyken, S.E.,Jia, M.,Busch, F.,Flores-Solis, D.,Bick, M.J.,Lu, P.,VanAernum, Z.L.,Sahasrabuddhe, A.,Langan, R.A.,Bermeo, S.,Brunette, T.J.,Mulligan, V.K.,Carter, L.P.,DiMaio, F.,Sgourakis, N.G.,Wysocki, V.H.,Baker, D. Programmable design of orthogonal protein heterodimers. Nature 2019 565 106 111 6DMA 30568301 DHD15_closed 2018-06-04 2018-12-19 Chen, Z.,Boyken, S.E.,Jia, M.,Busch, F.,Flores-Solis, D.,Bick, M.J.,Lu, P.,VanAernum, Z.L.,Sahasrabuddhe, A.,Langan, R.A.,Bermeo, S.,Brunette, T.J.,Mulligan, V.K.,Carter, L.P.,DiMaio, F.,Sgourakis, N.G.,Wysocki, V.H.,Baker, D. Programmable design of orthogonal protein heterodimers. Nature 2019 565 106 111 6DO3 30526872 KLHDC2 ubiquitin ligase in complex with SelK C-end degron 2018-06-08 2018-12-19 Rusnac, D.V.,Lin, H.C.,Canzani, D.,Tien, K.X.,Hinds, T.R.,Tsue, A.F.,Bush, M.F.,Yen, H.S.,Zheng, N. Recognition of the Diglycine C-End Degron by CRL2KLHDC2Ubiquitin Ligase. Mol. Cell 2018 72 813 0 6DO4 30526872 KLHDC2 ubiquitin ligase in complex with SelS C-end degron 2018-06-08 2018-12-19 Rusnac, D.V.,Lin, H.C.,Canzani, D.,Tien, K.X.,Hinds, T.R.,Tsue, A.F.,Bush, M.F.,Yen, H.S.,Zheng, N. Recognition of the Diglycine C-End Degron by CRL2KLHDC2Ubiquitin Ligase. Mol. Cell 2018 72 813 0 6DO5 30526872 KLHDC2 ubiquitin ligase in complex with USP1 C-end degron 2018-06-08 2018-12-19 Rusnac, D.V.,Lin, H.C.,Canzani, D.,Tien, K.X.,Hinds, T.R.,Tsue, A.F.,Bush, M.F.,Yen, H.S.,Zheng, N. Recognition of the Diglycine C-End Degron by CRL2KLHDC2Ubiquitin Ligase. Mol. Cell 2018 72 813 0 6MWA 30510035 NavAb Voltage-gated Sodium Channel, residues 1-239 2018-10-29 2018-12-19 Gamal El-Din, T.M.,Lenaeus, M.J.,Ramanadane, K.,Zheng, N.,Catterall, W.A. Molecular dissection of multiphase inactivation of the bacterial sodium channel NaVAb. J. Gen. Physiol. 2019 151 174 185 6MWB 30510035 NavAb Voltage-gated Sodium Channel, residues 1-239 with mutation T206A 2018-10-29 2018-12-19 Gamal El-Din, T.M.,Lenaeus, M.J.,Ramanadane, K.,Zheng, N.,Catterall, W.A. Molecular dissection of multiphase inactivation of the bacterial sodium channel NaVAb. J. Gen. Physiol. 2019 151 174 185 6MWD 30510035 NavAb Voltage-gated Sodium Channel, residues 1-239 with mutation T206S 2018-10-29 2018-12-19 Gamal El-Din, T.M.,Lenaeus, M.J.,Ramanadane, K.,Zheng, N.,Catterall, W.A. Molecular dissection of multiphase inactivation of the bacterial sodium channel NaVAb. J. Gen. Physiol. 2019 151 174 185 6MWG 30510035 NavAb Voltage-gated Sodium Channel, residues 1-239, with mutation T206V 2018-10-29 2018-12-19 Gamal El-Din, T.M.,Lenaeus, M.J.,Ramanadane, K.,Zheng, N.,Catterall, W.A. Molecular dissection of multiphase inactivation of the bacterial sodium channel NaVAb. J. Gen. Physiol. 2019 151 174 185 6DLC 30568301 Designed protein DHD1:234_A, Designed protein DHD1:234_B 2018-05-31 2018-12-26 Chen, Z.,Boyken, S.E.,Jia, M.,Busch, F.,Flores-Solis, D.,Bick, M.J.,Lu, P.,VanAernum, Z.L.,Sahasrabuddhe, A.,Langan, R.A.,Bermeo, S.,Brunette, T.J.,Mulligan, V.K.,Carter, L.P.,DiMaio, F.,Sgourakis, N.G.,Wysocki, V.H.,Baker, D. Programmable design of orthogonal protein heterodimers. Nature 2019 565 106 111 6CXT 30620182 Crystal structure of FAD-dependent dehydrogenase 2018-04-04 2019-01-16 Thapa, H.R.,Robbins, J.M.,Moore, B.S.,Agarwal, V. Insights into Thiotemplated Pyrrole Biosynthesis Gained from the Crystal Structure of Flavin-Dependent Oxidase in Complex with Carrier Protein. Biochemistry 2019 58 918 929 6MA6 30676743 Human CYP3A4 bound to an inhibitor metyrapone 2018-08-26 2019-01-16 Sevrioukova, I. Interaction of Human Drug-Metabolizing CYP3A4 with Small Inhibitory Molecules. Biochemistry 2019 58 930 939 6EFR Crystal Structure of iNicSnFR 1.0 2018-08-17 2019-01-23 Shivange, A.V.,Borden, P.M.,Muthusamy, A.K.,Nichols, A.L.,Bera, K.,Bao, H.,Bishara, I.,Jeon, J.,Mulcahy, M.J.,Kim, C.H.,Dougherty, D.A.,Chapman, E.R.,Marvin, J.S.,Looger, L.L.,Lester, H.A. Nicotinic Drugs in the Endoplasmic Reticulum: Beginning the Inside-out Pathway of Addiction and Therapy J.Gen.Physiol. 2019 0 0 0 6ATX 30673608 Crystal structure of Physcomitrella patens KAI2-like C 2017-08-29 2019-02-06 Burger, M.,Mashiguchi, K.,Lee, H.J.,Nakano, M.,Takemoto, K.,Seto, Y.,Yamaguchi, S.,Chory, J. Structural Basis of Karrikin and Non-natural Strigolactone Perception in Physcomitrella patens. Cell Rep 2019 26 855 0 6AZB 30673608 Crystal structure of Physcomitrella patens KAI2-like E 2017-09-11 2019-02-06 Burger, M.,Mashiguchi, K.,Lee, H.J.,Nakano, M.,Takemoto, K.,Seto, Y.,Yamaguchi, S.,Chory, J. Structural Basis of Karrikin and Non-natural Strigolactone Perception in Physcomitrella patens. Cell Rep 2019 26 855 0 6AZC 30673608 Crystal structure of Physcomitrella patens KAI2-like E S166A 2017-09-11 2019-02-06 Burger, M.,Mashiguchi, K.,Lee, H.J.,Nakano, M.,Takemoto, K.,Seto, Y.,Yamaguchi, S.,Chory, J. Structural Basis of Karrikin and Non-natural Strigolactone Perception in Physcomitrella patens. Cell Rep 2019 26 855 0 6AZD 30673608 Crystal structure of Physcomitrella patens KAI2-like H 2017-09-11 2019-02-06 Burger, M.,Mashiguchi, K.,Lee, H.J.,Nakano, M.,Takemoto, K.,Seto, Y.,Yamaguchi, S.,Chory, J. Structural Basis of Karrikin and Non-natural Strigolactone Perception in Physcomitrella patens. Cell Rep 2019 26 855 0 6CJN Crystal Structure of Chalcone Isomerase from Medicago Sativa with the G95T mutation 2018-02-26 2019-03-13 Burke, J.R.,La Clair, J.J.,Philippe, R.N.,Pabis, A.,Jez, J.M.,Cortina, G.,Kaltenbach, M.,Bowman, M.E.,Woods, K.B.,Nelson, A.T.,Tawfik, D.S.,Kamerlin, S.C.L.,Noel, J.P. Bifunctional Substrate Activation via an Arginine Residue Drives Catalysis in Chalcone Isomerases Acs Catalysis 2019 0 0 0 6NCU 30819901 Interleukin-37 residues 53-206- dimer 2018-12-12 2019-03-13 Eisenmesser, E.Z.,Gottschlich, A.,Redzic, J.S.,Paukovich, N.,Nix, J.C.,Azam, T.,Zhang, L.,Zhao, R.,Kieft, J.S.,The, E.,Meng, X.,Dinarello, C.A. Interleukin-37 monomer is the active form for reducing innate immunity. Proc. Natl. Acad. Sci. U.S.A. 2019 116 5514 5522 6NG1 30802056 Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with 6-(3-fluoro-5-(3-(methylamino)prop-1-yn-1-yl)phenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NG6 30802056 Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with (S)-6-(3-fluoro-5-(2-(pyrrolidin-2-yl)ethyl)phenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NG7 30802056 Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with 6-(3-fluoro-5-(2-((2R,4S)-4-fluoro-1-methylpyrrolidin-2-yl)ethyl)phenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NGD 30802056 Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with 6-(5-(3-(dimethylamino)propyl)-2,3,4-trifluorophenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NGI 30802056 Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with (S)-6-(2,3-difluoro-5-(2-(4-methylmorpholin-3-yl)ethyl)phenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NGK 30802056 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(3-(3-(dimethylamino)prop-1-yn-1-yl)-5-fluorophenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NGQ 30802056 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(3-fluoro-5-(2-((2R,4S)-4-fluoropyrrolidin-2-yl)ethyl)phenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NGS 30802056 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(5-(3-(dimethylamino)propyl)-2,3-difluorophenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NGT 30802056 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(3-(3-(dimethylamino)propyl)-2,6-difluorophenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NGV 30802056 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(3-(3-(dimethylamino)propyl)-2,5,6-trifluorophenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NGZ 30802056 Structure of rat neuronal nitric oxide synthase heme domain in complex with (S)-6-(2,3-difluoro-5-(2-(1-methylpyrrolidin-2-yl)ethyl)phenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NH0 30802056 Structure of rat neuronal nitric oxide synthase heme domain in complex with (S)-6-(2,3-difluoro-5-(2-(4-methylmorpholin-3-yl)ethyl)phenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NH1 30802056 Structure of human endothelial nitric oxide synthase heme domain in complex with 6-(3-fluoro-5-(3-(methylamino)prop-1-yn-1-yl)phenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NHE 30802056 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(5-(2-((2S,4R)-4-ethoxy-1-methylpyrrolidin-2-yl)ethyl)-2,3-difluorophenethyl)-4-methylpyridin-2-amine 2018-12-21 2019-03-13 Do, H.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem. 2019 62 2690 2707 6NSD 30963655 Tar14, tryptophan C-6 flavin-dependent halogenase (chlorinase) from taromycin biosynthesis 2019-01-24 2019-04-24 Luhavaya, H.,Sigrist, R.,Chekan, J.R.,McKinnie, S.M.K.,Moore, B.S. Biosynthesis of l-4-Chlorokynurenine, an Antidepressant Prodrug and a Non-Proteinogenic Amino Acid Found in Lipopeptide Antibiotics. Angew.Chem.Int.Ed.Engl. 2019 58 8394 8399 6DAO 29856600 NahE WT selenomethionine 2018-05-01 2019-05-08 LeVieux, J.A.,Medellin, B.,Johnson Jr., W.H.,Erwin, K.,Li, W.,Johnson, I.A.,Zhang, Y.J.,Whitman, C.P. Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily. Biochemistry 2018 57 3524 3536 6ONP 31017712 Crystal structure of periplasmic binding protein XoxJ from Methylobacterium extorquens AM1 2019-04-22 2019-05-08 Featherston, E.R.,Rose, H.R.,McBride, M.J.,Taylor, E.M.,Boal, A.K.,Cotruvo Jr., J.A. Biochemical and Structural Characterization of XoxG and XoxJ and Their Roles in Lanthanide-Dependent Methanol Dehydrogenase Activity. Chembiochem 2019 20 2360 2372 6DTL 31235876 Mitogen-activated protein kinase 6 2018-06-17 2019-05-15 Putarjunan, A.,Ruble, J.,Srivastava, A.,Zhao, C.,Rychel, A.L.,Hofstetter, A.K.,Tang, X.,Zhu, J.K.,Tama, F.,Zheng, N.,Torii, K.U. Bipartite anchoring of SCREAM enforces stomatal initiation by coupling MAP kinases to SPEECHLESS. Nat.Plants 2019 5 742 754 6MAV 31040180 Complex of tissue inhibitor of metalloproteinase-1 (TIMP-1) mutant L34G with matrix metalloproteinase-3 catalytic domain (MMP-3cd) 2018-08-28 2019-05-15 Raeeszadeh-Sarmazdeh, M.,Greene, K.A.,Sankaran, B.,Downey, G.P.,Radisky, D.C.,Radisky, E.S. Directed evolution of the metalloproteinase inhibitor TIMP-1 reveals that its N- and C-terminal domains cooperate in matrix metalloproteinase recognition. J.Biol.Chem. 2019 294 9476 9488 6N9D 31040180 Complex of tissue inhibitor of metalloproteinases-1 (TIMP-1) mutant (L34G/L133P/L151C/G154A) with matrix metalloproteinase-3 catalytic domain (MMP-3cd) 2018-12-03 2019-05-15 Raeeszadeh-Sarmazdeh, M.,Greene, K.A.,Sankaran, B.,Downey, G.P.,Radisky, D.C.,Radisky, E.S. Directed evolution of the metalloproteinase inhibitor TIMP-1 reveals that its N- and C-terminal domains cooperate in matrix metalloproteinase recognition. J.Biol.Chem. 2019 294 9476 9488 6NDZ 31086346 Designed repeat protein in complex with Fz8 2018-12-14 2019-05-15 Dang, L.T.,Miao, Y.,Ha, A.,Yuki, K.,Park, K.,Janda, C.Y.,Jude, K.M.,Mohan, K.,Ha, N.,Vallon, M.,Yuan, J.,Vilches-Moure, J.G.,Kuo, C.J.,Garcia, K.C.,Baker, D. Receptor subtype discrimination using extensive shape complementary designed interfaces. Nat.Struct.Mol.Biol. 2019 26 407 414 6EGC 31050411 Single-chain version of 2L4HC2_23 (PDB 5J0K) 2018-08-19 2019-05-29 Chen, Z.,Johnson, M.C.,Chen, J.,Bick, M.J.,Boyken, S.E.,Lin, B.,De Yoreo, J.J.,Kollman, J.M.,Baker, D.,DiMaio, F. Self-Assembling 2D Arrays with de Novo Protein Building Blocks. J.Am.Chem.Soc. 2019 141 8891 8895 6MOK 31123111 Dimeric DARPin A_distance_R7 complex with EpoR 2018-10-04 2019-06-05 Mohan, K.,Ueda, G.,Kim, A.R.,Jude, K.M.,Fallas, J.A.,Guo, Y.,Hafer, M.,Miao, Y.,Saxton, R.A.,Piehler, J.,Sankaran, V.G.,Baker, D.,Garcia, K.C. Topological control of cytokine receptor signaling induces differential effects in hematopoiesis. Science 2019 364 0 0 6OBT 31115703 Structural insights into dehydratase substrate selection for the borrelidin and fluvirucin polyketide synthases 2019-03-21 2019-06-05 Barajas, J.F.,McAndrew, R.P.,Thompson, M.G.,Backman, T.W.H.,Pang, B.,de Rond, T.,Pereira, J.H.,Benites, V.T.,Martin, H.G.,Baidoo, E.E.K.,Hillson, N.J.,Adams, P.D.,Keasling, J.D. Structural insights into dehydratase substrate selection for the borrelidin and fluvirucin polyketide synthases. J Ind Microbiol Biotechnol. 2019 46 1225 1235 6EF4 31142515 Crystal structure of mouse PP2A Aalpha P179R mutant 2018-08-16 2019-06-26 Taylor, S.E.,O'Connor, C.M.,Wang, Z.,Shen, G.,Song, H.,Leonard, D.,Sangodkar, J.,LaVasseur, C.,Avril, S.,Waggoner, S.,Zanotti, K.,Armstrong, A.J.,Nagel, C.,Resnick, K.,Singh, S.,Jackson, M.W.,Xu, W.,Haider, S.,DiFeo, A.,Narla, G. The Highly Recurrent PP2A A alpha-Subunit Mutation P179R Alters Protein Structure and Impairs PP2A Enzyme Function to Promote Endometrial Tumorigenesis. Cancer Res. 2019 79 4242 4257 6NZJ 31289188 Structural Analysis of a Nitrogenase Iron Protein from Methanosarcina acetivorans: Implications for CO2 Capture by a Surface-Exposed [Fe4S4] Cluster 2019-02-13 2019-06-26 Rettberg, L.A.,Kang, W.,Stiebritz, M.T.,Hiller, C.J.,Lee, C.C.,Liedtke, J.,Ribbe, M.W.,Hu, Y. Structural Analysis of a Nitrogenase Iron Protein from Methanosarcina acetivorans: Implications for CO 2 Capture by a Surface-Exposed [Fe 4 S 4 ] Cluster. Mbio 2019 10 0 0 6O60 31209342 Crystal structure of GGTase3-FBXL2-SKP1 complex 2019-03-04 2019-06-26 Kuchay, S.,Wang, H.,Marzio, A.,Jain, K.,Homer, H.,Fehrenbacher, N.,Philips, M.R.,Zheng, N.,Pagano, M. GGTase3 is a newly identified geranylgeranyltransferase targeting a ubiquitin ligase. Nat.Struct.Mol.Biol. 2019 26 628 636 6N0X 31268677 Crystal structure of Anaerolinea thermophila mevalonate 5-phosphate decarboxylase complexed with (R)-MVAP 2018-11-07 2019-07-17 Thomas, S.T.,Louie, G.V.,Lubin, J.W.,Lundblad, V.,Noel, J.P. Substrate Specificity and Engineering of Mevalonate 5-Phosphate Decarboxylase. Acs Chem.Biol. 2019 14 1767 1779 6N0Y 31268677 Crystal structure of Anaerolinea thermophila mevalonate 5-phosphate decarboxylase complexed with (R)-MVAPP 2018-11-07 2019-07-17 Thomas, S.T.,Louie, G.V.,Lubin, J.W.,Lundblad, V.,Noel, J.P. Substrate Specificity and Engineering of Mevalonate 5-Phosphate Decarboxylase. Acs Chem.Biol. 2019 14 1767 1779 6N0Z 31268677 Crystal structure of Anaerolinea thermophila mevalonate 5-phosphate decarboxylase N20K H194M mutant complexed with (R)-MVAPP 2018-11-07 2019-07-17 Thomas, S.T.,Louie, G.V.,Lubin, J.W.,Lundblad, V.,Noel, J.P. Substrate Specificity and Engineering of Mevalonate 5-Phosphate Decarboxylase. Acs Chem.Biol. 2019 14 1767 1779 6N10 31268677 Crystal structure of Arabidopsis thaliana mevalonate 5-diphosphate decarboxylase 1 complexed with (R)-MVAPP 2018-11-07 2019-07-17 Thomas, S.T.,Louie, G.V.,Lubin, J.W.,Lundblad, V.,Noel, J.P. Substrate Specificity and Engineering of Mevalonate 5-Phosphate Decarboxylase. Acs Chem.Biol. 2019 14 1767 1779 6NRL 31375595 X-ray structure of H6N6-NS1 delta(80-84) R38A K41A E71G mutant 2019-01-23 2019-07-31 Mitra, S.,Kumar, D.,Hu, L.,Sankaran, B.,Moosa, M.M.,Rice, A.P.,Ferreon, J.C.,Ferreon, A.C.M.,Prasad, B.V.V. Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity. J.Virol. 2019 93 0 0 6O01 31375595 X-ray structure of H5N1-NS1 R38A K41A G71E mutant 2019-02-14 2019-07-31 Mitra, S.,Kumar, D.,Hu, L.,Sankaran, B.,Moosa, M.M.,Rice, A.P.,Ferreon, J.C.,Ferreon, A.C.M.,Prasad, B.V.V. Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity. J.Virol. 2019 93 0 0 6OQE 31375595 X-ray structure of H6N6-NS1 delta(80-84) R38A K41A mutant 2019-04-26 2019-07-31 Mitra, S.,Kumar, D.,Hu, L.,Sankaran, B.,Moosa, M.M.,Rice, A.P.,Ferreon, J.C.,Ferreon, A.C.M.,Prasad, B.V.V. Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity. J.Virol. 2019 93 0 0 6OEL 31387945 Engineered Fab bound to IL-4 receptor 2019-03-27 2019-08-07 Spangler, J.B.,Moraga, I.,Jude, K.M.,Savvides, C.S.,Garcia, K.C. A strategy for the selection of monovalent antibodies that span protein dimer interfaces. J.Biol.Chem. 2019 294 13876 13886 6IWV 30676665 Crystal structure of a single strand DNA binding protein 2018-12-07 2019-08-14 Wang, H.,Wang, Z.,Tang, Q.,Yan, X.X.,Xu, W. Crystal structure of the LUFS domain of human single-stranded DNA binding Protein 2 (SSBP2). Protein Sci. 2019 28 788 793 6P6Y 31353218 Crystal structure of voltage-gated sodium channel NavAb V100C/Q150C disulfide crosslinked mutant in the activated state 2019-06-04 2019-08-14 Wisedchaisri, G.,Tonggu, L.,McCord, E.,Gamal El-Din, T.M.,Wang, L.,Zheng, N.,Catterall, W.A. Resting-State Structure and Gating Mechanism of a Voltage-Gated Sodium Channel. Cell 2019 178 993 0 6MS8 Crystal Structure of Chalcone Isomerase from Medicago Truncatula Complexed with (2S) Naringenin 2018-10-16 2019-08-21 Burke, J.R.,La Clair, J.J.,Philippe, R.N.,Pabis, A.,Jez, J.M.,Cortina, G.,Kaltenbach, M.,Bowman, M.E.,Woods, K.B.,Nelson, A.T.,Tawfik, D.S.,Kamerlin, S.C.L.,Noel, J.P. Bifunctional Substrate Activation via an Arginine Residue Drives Catalysis in Chalcone Isomerases Acs Catalysis 2019 0 0 0 6PTZ 31484780 Crystal structure of pigeon Cryptochrome 4 mutant Y319D in complex with flavin adenine dinucleotide 2019-07-16 2019-09-04 Zoltowski, B.D.,Chelliah, Y.,Wickramaratne, A.,Jarocha, L.,Karki, N.,Xu, W.,Mouritsen, H.,Hore, P.J.,Hibbs, R.E.,Green, C.B.,Takahashi, J.S. Chemical and structural analysis of a photoactive vertebrate cryptochrome from pigeon. Proc.Natl.Acad.Sci.USA 2019 116 19449 19457 6MK2 31481469 Crystal structure of Coleus blumei rosmarinic acid synthase (RAS) in complex with 4-coumaroyl-(R)-3-(4-hydroxyphenyl)lactate 2018-09-24 2019-09-11 Levsh, O.,Pluskal, T.,Carballo, V.,Mitchell, A.J.,Weng, J.K. Independent evolution of rosmarinic acid biosynthesis in two sister families under the Lamiids clade of flowering plants. J.Biol.Chem. 2019 294 15193 15205 6N4N 31501561 Crystal structure of the designed protein DNCR2/danoprevir/NS3a complex 2018-11-19 2019-09-11 Foight, G.W.,Wang, Z.,Wei, C.T.,Jr Greisen, P.,Warner, K.M.,Cunningham-Bryant, D.,Park, K.,Brunette, T.J.,Sheffler, W.,Baker, D.,Maly, D.J. Multi-input chemical control of protein dimerization for programming graded cellular responses. Nat.Biotechnol. 2019 37 1209 1216 6P5W 31465221 Structure of DCN1 bound to 3-methyl-N-((4S,5S)-3-methyl-6-oxo-1-phenyl-4-(p-tolyl)-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-b]pyridin-5-yl)benzamide 2019-05-31 2019-09-11 Kim, H.S.,Hammill, J.T.,Scott, D.C.,Chen, Y.,Min, J.,Rector, J.,Singh, B.,Schulman, B.A.,Guy, R.K. Discovery of Novel Pyrazolo-pyridone DCN1 Inhibitors Controlling Cullin Neddylation. J.Med.Chem. 2019 62 8429 8442 6EEY 31575922 Crystal structure of human Scribble PDZ4 R1110G Mutant 2018-08-15 2019-10-02 Janezic, E.M.,Harris, D.A.,Dinh, D.,Lee, K.S.,Stewart, A.,Hinds, T.R.,Hsu, P.L.,Zheng, N.,Hague, C. Scribble co-operatively binds multiple alpha1D-adrenergic receptor C-terminal PDZ ligands. Sci Rep 2019 9 14073 14073 6MYV 31548686 Sialidase26 co-crystallized with DANA-Gc 2018-11-02 2019-10-02 Zaramela, L.S.,Martino, C.,Alisson-Silva, F.,Rees, S.D.,Diaz, S.L.,Chuzel, L.,Ganatra, M.B.,Taron, C.H.,Secrest, P.,Zuniga, C.,Huang, J.,Siegel, D.,Chang, G.,Varki, A.,Zengler, K. Gut bacteria responding to dietary change encode sialidases that exhibit preference for red meat-associated carbohydrates. Nat Microbiol 2019 4 2082 2089 6KE5 31391290 Structure of CavAb in complex with Diltiazem and Amlodipine 2019-07-03 2019-10-23 Tang, L.,Gamal El-Din, T.M.,Lenaeus, M.J.,Zheng, N.,Catterall, W.A. Structural Basis for Diltiazem Block of a Voltage-Gated Ca2+Channel. Mol.Pharmacol. 2019 96 485 492 6KE5 31391290 Structure of CavAb in complex with Diltiazem and Amlodipine 2019-07-03 2019-10-23 Tang, L.,Gamal El-Din, T.M.,Lenaeus, M.J.,Zheng, N.,Catterall, W.A. Structural Basis for Diltiazem Block of a Voltage-Gated Ca2+Channel. Mol.Pharmacol. 2019 96 485 492 6KEB 31391290 Structure basis for Diltiazem block of a voltage-gated calcium channel 2019-07-04 2019-10-23 Tang, L.,Gamal El-Din, T.M.,Lenaeus, M.J.,Zheng, N.,Catterall, W.A. Structural Basis for Diltiazem Block of a Voltage-Gated Ca2+Channel. Mol.Pharmacol. 2019 96 485 492 6KEB 31391290 Structure basis for Diltiazem block of a voltage-gated calcium channel 2019-07-04 2019-10-23 Tang, L.,Gamal El-Din, T.M.,Lenaeus, M.J.,Zheng, N.,Catterall, W.A. Structural Basis for Diltiazem Block of a Voltage-Gated Ca2+Channel. Mol.Pharmacol. 2019 96 485 492 6JUH 30981510 structure of CavAb in complex with efonidipine 2019-04-13 2019-11-06 Xu, F.,Xiong, W.,Huang, Y.,Shen, J.,Zhou, D.,Tang, L. Structural basis for efonidipine block of a voltage-gated Ca2+channel. Biochem.Biophys.Res.Commun. 2019 513 631 634 6PLE 31638374 Crystal structure of MhuD R26S mutant in complex with biliverdin 2019-06-30 2019-11-06 Chao, A.,Burley, K.H.,Sieminski, P.J.,de Miranda, R.,Chen, X.,Mobley, D.L.,Goulding, C.W. Structure of aMycobacterium tuberculosisHeme-Degrading Protein, MhuD, Variant in Complex with Its Product. Biochemistry 2019 58 4610 4620 6N54 32015544 Crystal structure of human uridine-cytidine kinase 2 complexed with 2'-azidocytidine monophosphate 2018-11-21 2019-11-27 Nainar, S.,Cuthbert, B.J.,Lim, N.M.,England, W.E.,Ke, K.,Sophal, K.,Quechol, R.,Mobley, D.L.,Goulding, C.W.,Spitale, R.C. An optimized chemical-genetic method for cell-specific metabolic labeling of RNA. Nat.Methods 2020 17 311 318 6N55 32015544 Crystal structure of human uridine-cytidine kinase 2 complexed with 2'-azidouridine 2018-11-21 2019-11-27 Nainar, S.,Cuthbert, B.J.,Lim, N.M.,England, W.E.,Ke, K.,Sophal, K.,Quechol, R.,Mobley, D.L.,Goulding, C.W.,Spitale, R.C. An optimized chemical-genetic method for cell-specific metabolic labeling of RNA. Nat.Methods 2020 17 311 318 6NAZ Crystal structure of DIRAS 2/3 chimera in complex with GDP 2018-12-06 2019-12-18 Gilbert, Y.H.,Reger, A.,Sharma, R.,Bast, C.R.,Kim, C. Crystal structure of DIRAS 2/3 chimera in complex with GDP To Be Published 0 0 0 0 6V0T 32627744 Crystal Structure of Catalytic Subunit of Bovine Pyruvate Dehydrogenase Phosphatase 1 - Catalytic Domain 2019-11-19 2019-12-18 Guo, Y.,Qiu, W.,Roche, T.E.,Hackert, M.L. Crystal structure of the catalytic subunit of bovine pyruvate dehydrogenase phosphatase. Acta Crystallogr.,Sect.F 2020 76 292 301 6TYD 31892537 Structure of human LDB1 in complex with SSBP2 2019-08-08 2020-01-01 Wang, H.,Kim, J.,Wang, Z.,Yan, X.X.,Dean, A.,Xu, W. Crystal structure of human LDB1 in complex with SSBP2. Proc.Natl.Acad.Sci.USA 2020 117 1042 1048 6O35 32848250 Crystal structure of a de novo designed octameric helical-bundle protein 2019-02-25 2020-03-18 Xu, C.,Lu, P.,Gamal El-Din, T.M.,Pei, X.Y.,Johnson, M.C.,Uyeda, A.,Bick, M.J.,Xu, Q.,Jiang, D.,Bai, H.,Reggiano, G.,Hsia, Y.,Brunette, T.J.,Dou, J.,Ma, D.,Lynch, E.M.,Boyken, S.E.,Huang, P.S.,Stewart, L.,DiMaio, F.,Kollman, J.M.,Luisi, B.F.,Matsuura, T.,Catterall, W.A.,Baker, D. Computational design of transmembrane pores. Nature 2020 585 129 134 6VYE 6-phosphogluconolactonase from Trypanosoma cruzi 2020-02-26 2020-03-18 Merritt, E.A.,Structural Genomics of Pathogenic Protozoa Consortium (SGPP),Hol, W.G.J.,Buckner, F.S.,Van Voorhis, W.C.,Neely, H.,Le Trong, I.,Caruthers, J.,Fan, E.,Verlinde, C.L.M.J. 6-phosphogluconolactonase from Trypanosoma cruzi To be published 0 0 0 0 6P7K 31469273 Structure of HMG-CoA reductase from Burkholderia cenocepacia 2019-06-05 2020-04-08 Peacock, R.B.,Hicks, C.W.,Walker, A.M.,Dewing, S.M.,Lewis, K.M.,Abboud, J.C.,Stewart, S.W.A.,Kang, C.,Watson, J.M. Structural and Functional Characterization of Dynamic Oligomerization in Burkholderia cenocepacia HMG-CoA Reductase. Biochemistry 2019 58 3960 3970 6VKZ 32457155 Crystal Structure of the N-prenyltransferase DabA in Complex with GSPP and Mg2+ 2020-01-22 2020-04-08 Chekan, J.R.,McKinnie, S.M.K.,Noel, J.P.,Moore, B.S. Algal neurotoxin biosynthesis repurposes the terpene cyclase structural fold into anN-prenyltransferase. Proc.Natl.Acad.Sci.USA 2020 117 12799 12805 6VL0 32457155 Crystal Structure of the N-prenyltransferase DabA in Complex with GSPP and Mn2+ 2020-01-22 2020-04-08 Chekan, J.R.,McKinnie, S.M.K.,Noel, J.P.,Moore, B.S. Algal neurotoxin biosynthesis repurposes the terpene cyclase structural fold into anN-prenyltransferase. Proc.Natl.Acad.Sci.USA 2020 117 12799 12805 6VL1 32457155 Crystal Structure of the N-prenyltransferase DabA in Complex with NGG and Mg2+ 2020-01-22 2020-04-08 Chekan, J.R.,McKinnie, S.M.K.,Noel, J.P.,Moore, B.S. Algal neurotoxin biosynthesis repurposes the terpene cyclase structural fold into anN-prenyltransferase. Proc.Natl.Acad.Sci.USA 2020 117 12799 12805 6W3W 32839327 An enumerative algorithm for de novo design of proteins with diverse pocket structures 2020-03-09 2020-04-08 Basanta, B.,Bick, M.J.,Bera, A.K.,Norn, C.,Chow, C.M.,Carter, L.P.,Goreshnik, I.,Dimaio, F.,Baker, D. An enumerative algorithm for de novo design of proteins with diverse pocket structures. Proc.Natl.Acad.Sci.USA 2020 117 22135 22145 6W40 32839327 An enumerative algorithm for de novo design of proteins with diverse pocket structures 2020-03-09 2020-04-08 Basanta, B.,Bick, M.J.,Bera, A.K.,Norn, C.,Chow, C.M.,Carter, L.P.,Goreshnik, I.,Dimaio, F.,Baker, D. An enumerative algorithm for de novo design of proteins with diverse pocket structures. Proc.Natl.Acad.Sci.USA 2020 117 22135 22145 6NX2 32188784 Crystal structure of computationally designed protein AAA 2019-02-07 2020-04-22 Wei, K.Y.,Moschidi, D.,Bick, M.J.,Nerli, S.,McShan, A.C.,Carter, L.P.,Huang, P.S.,Fletcher, D.A.,Sgourakis, N.G.,Boyken, S.E.,Baker, D. Computational design of closely related proteins that adopt two well-defined but structurally divergent folds. Proc.Natl.Acad.Sci.USA 2020 117 7208 7215 6V6P 32299911 Crystal structure of CTX-M-14 E166A/D240G beta-lactamase 2019-12-05 2020-04-22 Brown, C.A.,Hu, L.,Sun, Z.,Patel, M.P.,Singh, S.,Porter, J.R.,Sankaran, B.,Prasad, B.V.V.,Bowman, G.R.,Palzkill, T. Antagonism between substitutions in beta-lactamase explains a path not taken in the evolution of bacterial drug resistance. J.Biol.Chem. 2020 295 7376 7390 6V8V 32299911 Crystal structure of CTX-M-14 E166A/P167S/D240G beta-lactamase in complex with ceftazidime-2 2019-12-12 2020-04-22 Brown, C.A.,Hu, L.,Sun, Z.,Patel, M.P.,Singh, S.,Porter, J.R.,Sankaran, B.,Prasad, B.V.V.,Bowman, G.R.,Palzkill, T. Antagonism between substitutions in beta-lactamase explains a path not taken in the evolution of bacterial drug resistance. J.Biol.Chem. 2020 295 7376 7390 6WI5 32241946 De novo designed protein Foldit4 2020-04-08 2020-04-22 Chen, Z.,Kibler, R.D.,Hunt, A.,Busch, F.,Pearl, J.,Jia, M.,VanAernum, Z.L.,Wicky, B.I.M.,Dods, G.,Liao, H.,Wilken, M.S.,Ciarlo, C.,Green, S.,El-Samad, H.,Stamatoyannopoulos, J.,Wysocki, V.H.,Jewett, M.C.,Boyken, S.E.,Baker, D. De novo design of protein logic gates. Science 2020 368 78 84 6OPL Human biliverdin IX beta reductase Q14R mutant: NADP complex 2019-04-25 2020-04-29 Paukovich, N.A.,Eisenmesser, E.Z. Controlling biliverdin reductase B coenzyme binding through evolution To Be Published 0 0 0 0 6PMV 32302123 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-(4-(2-Aminoethyl)phenyl)-4-methylquinolin-2-amine 2019-07-02 2020-04-29 Cinelli, M.A.,Reidl, C.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. First Contact: 7-Phenyl-2-Aminoquinolines, Potent and Selective Neuronal Nitric Oxide Synthase Inhibitors That Target an Isoform-Specific Aspartate. J.Med.Chem. 2020 63 4528 4554 6PMX 32302123 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-(3-(2-Aminoethyl)phenyl)-4-methylquinolin-2-amine 2019-07-02 2020-04-29 Cinelli, M.A.,Reidl, C.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. First Contact: 7-Phenyl-2-Aminoquinolines, Potent and Selective Neuronal Nitric Oxide Synthase Inhibitors That Target an Isoform-Specific Aspartate. J.Med.Chem. 2020 63 4528 4554 6PN0 32302123 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-(3-(Aminomethyl)-4-ethoxyphenyl)-4-methylquinolin-2-amine 2019-07-02 2020-04-29 Cinelli, M.A.,Reidl, C.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. First Contact: 7-Phenyl-2-Aminoquinolines, Potent and Selective Neuronal Nitric Oxide Synthase Inhibitors That Target an Isoform-Specific Aspartate. J.Med.Chem. 2020 63 4528 4554 6PNC 32302123 Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with 7-(3-(2-Aminoethyl)phenyl)-4-methylquinolin-2-amine 2019-07-02 2020-04-29 Cinelli, M.A.,Reidl, C.T.,Li, H.,Chreifi, G.,Poulos, T.L.,Silverman, R.B. First Contact: 7-Phenyl-2-Aminoquinolines, Potent and Selective Neuronal Nitric Oxide Synthase Inhibitors That Target an Isoform-Specific Aspartate. J.Med.Chem. 2020 63 4528 4554 6UIY 32309932 Artificial Iron Proteins: Modelling the Active Sites in Non-Heme Dioxygenases 2019-10-01 2020-05-06 Miller, K.R.,Paretsky, J.D.,Follmer, A.H.,Heinisch, T.,Mittra, K.,Gul, S.,Kim, I.S.,Fuller, F.D.,Batyuk, A.,Sutherlin, K.D.,Brewster, A.S.,Bhowmick, A.,Sauter, N.K.,Kern, J.,Yano, J.,Green, M.T.,Ward, T.R.,Borovik, A.S. Artificial Iron Proteins: Modeling the Active Sites in Non-Heme Dioxygenases. Inorg.Chem. 2020 59 6000 6009 6U7N 32710982 Crystal structure of neurotrimin (NTM) 2019-09-03 2020-08-12 Venkannagari, H.,Kasper, J.M.,Misra, A.,Rush, S.A.,Fan, S.,Lee, H.,Sun, H.,Seshadrinathan, S.,Machius, M.,Hommel, J.D.,Rudenko, G. Highly Conserved Molecular Features in IgLONs Contrast Their Distinct Structural and Biological Outcomes. J.Mol.Biol. 2020 432 5287 5303 6V8E 32748788 Computationally designed C3-symmetric homotrimer from TPR repeat protein 2019-12-10 2020-08-12 Ueda, G.,Antanasijevic, A.,Fallas, J.A.,Sheffler, W.,Copps, J.,Ellis, D.,Hutchinson, G.B.,Moyer, A.,Yasmeen, A.,Tsybovsky, Y.,Park, Y.J.,Bick, M.J.,Sankaran, B.,Gillespie, R.A.,Brouwer, P.J.,Zwart, P.H.,Veesler, D.,Kanekiyo, M.,Graham, B.S.,Sanders, R.W.,Moore, J.P.,Klasse, P.J.,Ward, A.B.,King, N.P.,Baker, D. Tailored design of protein nanoparticle scaffolds for multivalent presentation of viral glycoprotein antigens. Elife 2020 9 0 0 6WPG 32788727 Structural Basis of Salicylic Acid Perception by Arabidopsis NPR Proteins 2020-04-27 2020-08-12 Wang, W.,Withers, J.,Li, H.,Zwack, P.J.,Rusnac, D.V.,Shi, H.,Liu, L.,Yan, S.,Hinds, T.R.,Guttman, M.,Dong, X.,Zheng, N. Structural basis of salicylic acid perception by Arabidopsis NPR proteins. Nature 2020 586 311 316 6U2M 33795886 Crystal structure of a HaloTag-based calcium indicator, HaloCaMP V2, bound to JF635 2019-08-20 2020-09-30 Deo, C.,Abdelfattah, A.S.,Bhargava, H.K.,Berro, A.J.,Falco, N.,Farrants, H.,Moeyaert, B.,Chupanova, M.,Lavis, L.D.,Schreiter, E.R. The HaloTag as a general scaffold for far-red tunable chemigenetic indicators. Nat.Chem.Biol. 2021 17 718 723 7JUT 32927473 Crystal Structure of KSR2:MEK1 in complex with ANP-PNP, and allosteric MEK inhibitor Selumetinib 2020-08-20 2020-09-30 Khan, Z.M.,Real, A.M.,Marsiglia, W.M.,Chow, A.,Duffy, M.E.,Yerabolu, J.R.,Scopton, A.P.,Dar, A.C. Structural basis for the action of the drug trametinib at KSR-bound MEK. Nature 2020 588 509 514 7JUZ 32927473 Crystal Structure of KSR1:MEK1 in complex with AMP-PNP, and allosteric MEK inhibitor Selumetinib 2020-08-20 2020-09-30 Khan, Z.M.,Real, A.M.,Marsiglia, W.M.,Chow, A.,Duffy, M.E.,Yerabolu, J.R.,Scopton, A.P.,Dar, A.C. Structural basis for the action of the drug trametinib at KSR-bound MEK. Nature 2020 588 509 514 6WGN 33145412 Crystal structure of K-Ras(G12D) GppNHp bound to cyclic peptide ligand KD2 2020-04-06 2020-10-14 Zhang, Z.,Gao, R.,Hu, Q.,Peacock, H.,Peacock, D.M.,Dai, S.,Shokat, K.M.,Suga, H. GTP-State-Selective Cyclic Peptide Ligands of K-Ras(G12D) Block Its Interaction with Raf. Acs Cent.Sci. 2020 6 1753 1761 6URF 33356117 Malic enzyme from Mycobacterium tuberculosis 2019-10-23 2020-10-28 Burley, K.H.,Cuthbert, B.J.,Basu, P.,Newcombe, J.,Irimpan, E.M.,Quechol, R.,Foik, I.P.,Mobley, D.L.,Beste, D.J.V.,Goulding, C.W. Structural and Molecular Dynamics of Mycobacterium tuberculosis Malic Enzyme, a Potential Anti-TB Drug Target. Acs Infect Dis. 2021 7 174 188 7K2W 33109613 Crystal structure of CTX-M-14 E166A/K234R Beta-lactamase in complex with hydrolyzed cefotaxime 2020-09-09 2020-11-04 Soeung, V.,Lu, S.,Hu, L.,Judge, A.,Sankaran, B.,Prasad, B.V.V.,Palzkill, T. A drug-resistant beta-lactamase variant changes the conformation of its active-site proton shuttle to alter substrate specificity and inhibitor potency. J.Biol.Chem. 2020 295 18239 18255 7K2X 33109613 Crystal structure of CTX-M-14 E166A/K234R Beta-lactamase 2020-09-09 2020-11-04 Soeung, V.,Lu, S.,Hu, L.,Judge, A.,Sankaran, B.,Prasad, B.V.V.,Palzkill, T. A drug-resistant beta-lactamase variant changes the conformation of its active-site proton shuttle to alter substrate specificity and inhibitor potency. J.Biol.Chem. 2020 295 18239 18255 7K2Y 33109613 Crystal structure of CTX-M-14 E166A/K234R Beta-lactamase in complex with hydrolyzed ampicillin 2020-09-09 2020-11-04 Soeung, V.,Lu, S.,Hu, L.,Judge, A.,Sankaran, B.,Prasad, B.V.V.,Palzkill, T. A drug-resistant beta-lactamase variant changes the conformation of its active-site proton shuttle to alter substrate specificity and inhibitor potency. J.Biol.Chem. 2020 295 18239 18255 6V8G 33185289 GltPh mutant - Y204L A345V V366A 2019-12-11 2020-11-18 Huysmans, G.H.M.,Ciftci, D.,Wang, X.,Blanchard, S.C.,Boudker, O. The high-energy transition state of the glutamate transporter homologue GltPh. Embo J. 2021 40 0 0 6WVS 33203677 Hyperstable de novo TIM barrel variant DeNovoTIM15 2020-05-06 2020-11-25 Caldwell, S.J.,Haydon, I.C.,Piperidou, N.,Huang, P.S.,Bick, M.J.,Sjostrom, H.S.,Hilvert, D.,Baker, D.,Zeymer, C. Tight and specific lanthanide binding in a de novo TIM barrel with a large internal cavity designed by symmetric domain fusion. Proc.Natl.Acad.Sci.USA 2020 117 30362 30369 6WXO 33203677 De novo TIM barrel-ferredoxin fold fusion homodimer with 2-histidine 2-glutamate centre TFD-HE 2020-05-11 2020-11-25 Caldwell, S.J.,Haydon, I.C.,Piperidou, N.,Huang, P.S.,Bick, M.J.,Sjostrom, H.S.,Hilvert, D.,Baker, D.,Zeymer, C. Tight and specific lanthanide binding in a de novo TIM barrel with a large internal cavity designed by symmetric domain fusion. Proc.Natl.Acad.Sci.USA 2020 117 30362 30369 7K4R 33214289 Crystal structure of Kemp Eliminase HG3 K50Q 2020-09-16 2020-12-02 Otten, R.,Padua, R.A.P.,Bunzel, H.A.,Nguyen, V.,Pitsawong, W.,Patterson, M.,Sui, S.,Perry, S.L.,Cohen, A.E.,Hilvert, D.,Kern, D. How directed evolution reshapes the energy landscape in an enzyme to boost catalysis. Science 2020 370 1442 1446 7K4S 33214289 Crystal structure of Kemp Eliminase HG3.7 2020-09-16 2020-12-02 Otten, R.,Padua, R.A.P.,Bunzel, H.A.,Nguyen, V.,Pitsawong, W.,Patterson, M.,Sui, S.,Perry, S.L.,Cohen, A.E.,Hilvert, D.,Kern, D. How directed evolution reshapes the energy landscape in an enzyme to boost catalysis. Science 2020 370 1442 1446 7K4T 33214289 Crystal structure of Kemp Eliminase HG3.17 2020-09-16 2020-12-02 Otten, R.,Padua, R.A.P.,Bunzel, H.A.,Nguyen, V.,Pitsawong, W.,Patterson, M.,Sui, S.,Perry, S.L.,Cohen, A.E.,Hilvert, D.,Kern, D. How directed evolution reshapes the energy landscape in an enzyme to boost catalysis. Science 2020 370 1442 1446 7K4U 33214289 Crystal structure of Kemp Eliminase HG3 K50Q in complex with the transition state analog 6-nitrobenzotriazole 2020-09-16 2020-12-02 Otten, R.,Padua, R.A.P.,Bunzel, H.A.,Nguyen, V.,Pitsawong, W.,Patterson, M.,Sui, S.,Perry, S.L.,Cohen, A.E.,Hilvert, D.,Kern, D. How directed evolution reshapes the energy landscape in an enzyme to boost catalysis. Science 2020 370 1442 1446 7K4V 33214289 Crystal structure of Kemp Eliminase HG3.17 2020-09-16 2020-12-02 Otten, R.,Padua, R.A.P.,Bunzel, H.A.,Nguyen, V.,Pitsawong, W.,Patterson, M.,Sui, S.,Perry, S.L.,Cohen, A.E.,Hilvert, D.,Kern, D. How directed evolution reshapes the energy landscape in an enzyme to boost catalysis. Science 2020 370 1442 1446 7K4X 33214289 Crystal structure of Kemp Eliminase HG3.7 in complex with the transition state analog 6-nitrobenzotriazole 2020-09-16 2020-12-02 Otten, R.,Padua, R.A.P.,Bunzel, H.A.,Nguyen, V.,Pitsawong, W.,Patterson, M.,Sui, S.,Perry, S.L.,Cohen, A.E.,Hilvert, D.,Kern, D. How directed evolution reshapes the energy landscape in an enzyme to boost catalysis. Science 2020 370 1442 1446 7K4Z 33214289 Crystal structure of Kemp Eliminase HG3.17 in complex with the transition state analog 6-nitrobenzotriazole 2020-09-16 2020-12-02 Otten, R.,Padua, R.A.P.,Bunzel, H.A.,Nguyen, V.,Pitsawong, W.,Patterson, M.,Sui, S.,Perry, S.L.,Cohen, A.E.,Hilvert, D.,Kern, D. How directed evolution reshapes the energy landscape in an enzyme to boost catalysis. Science 2020 370 1442 1446 6X24 33398020 Structural basis of plant blue light photoreceptor 2020-05-19 2020-12-16 Palayam, M.,Ganapathy, J.,Guercio, A.M.,Tal, L.,Deck, S.L.,Shabek, N. Structural insights into photoactivation of plant Cryptochrome-2. Commun Biol 2021 4 28 28 6XNS 33863889 C3_crown-05 2020-07-04 2020-12-23 Hsia, Y.,Mout, R.,Sheffler, W.,Edman, N.I.,Vulovic, I.,Park, Y.J.,Redler, R.L.,Bick, M.J.,Bera, A.K.,Courbet, A.,Kang, A.,Brunette, T.J.,Nattermann, U.,Tsai, E.,Saleem, A.,Chow, C.M.,Ekiert, D.,Bhabha, G.,Veesler, D.,Baker, D. Design of multi-scale protein complexes by hierarchical building block fusion. Nat Commun 2021 12 2294 2294 6VOB 33528256 Artificial Metalloproteins with Dinuclear Iron Centers 2020-01-30 2021-02-03 Miller, K.R.,Biswas, S.,Jasniewski, A.,Follmer, A.H.,Biswas, A.,Albert, T.,Sabuncu, S.,Bominaar, E.L.,Hendrich, M.P.,Moenne-Loccoz, P.,Borovik, A.S. Artificial Metalloproteins with Dinuclear Iron-Hydroxido Centers. J.Am.Chem.Soc. 2021 143 2384 2393 6VP2 33528256 Artificial Metalloproteins with Dinuclear Iron Centers 2020-02-01 2021-02-03 Miller, K.R.,Biswas, S.,Jasniewski, A.,Follmer, A.H.,Biswas, A.,Albert, T.,Sabuncu, S.,Bominaar, E.L.,Hendrich, M.P.,Moenne-Loccoz, P.,Borovik, A.S. Artificial Metalloproteins with Dinuclear Iron-Hydroxido Centers. J.Am.Chem.Soc. 2021 143 2384 2393 6VL3 36603507 The crystal structure of the 2009 H1N1 PA endonuclease mutant I38T in complex with SJ000986436 2020-01-22 2021-02-10 Slavish, P.J.,Cuypers, M.G.,Rimmer, M.A.,Abdolvahabi, A.,Jeevan, T.,Kumar, G.,Jarusiewicz, J.A.,Vaithiyalingam, S.,Jones, J.C.,Bowling, J.J.,Price, J.E.,DuBois, R.M.,Min, J.,Webby, R.J.,Rankovic, Z.,White, S.W. Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential. Eur.J.Med.Chem. 2023 247 115035 115035 7K5O 33976175 Bst DNA polymerase I time-resolved structure, 1 min post dATP addition 2020-09-17 2021-03-03 Chim, N.,Meza, R.A.,Trinh, A.M.,Yang, K.,Chaput, J.C. Following replicative DNA synthesis by time-resolved X-ray crystallography. Nat Commun 2021 12 2641 2641 7K5P 33976175 Bst DNA polymerase I time-resolved structure, 4 min post dATP addition 2020-09-17 2021-03-03 Chim, N.,Meza, R.A.,Trinh, A.M.,Yang, K.,Chaput, J.C. Following replicative DNA synthesis by time-resolved X-ray crystallography. Nat Commun 2021 12 2641 2641 7K5Q 33976175 Bst DNA polymerase I time-resolved structure, 8 min post dATP addition 2020-09-17 2021-03-03 Chim, N.,Meza, R.A.,Trinh, A.M.,Yang, K.,Chaput, J.C. Following replicative DNA synthesis by time-resolved X-ray crystallography. Nat Commun 2021 12 2641 2641 7K5R 33976175 Bst DNA polymerase I time-resolved structure, 120 min post dATP addition 2020-09-17 2021-03-03 Chim, N.,Meza, R.A.,Trinh, A.M.,Yang, K.,Chaput, J.C. Following replicative DNA synthesis by time-resolved X-ray crystallography. Nat Commun 2021 12 2641 2641 7BPH 36170854 Crystal structure of GppNHp-bound GNAS in complex with the cyclic peptide inhibitor GN13 2020-03-22 2021-03-31 Dai, S.A.,Hu, Q.,Gao, R.,Blythe, E.E.,Touhara, K.K.,Peacock, H.,Zhang, Z.,von Zastrow, M.,Suga, H.,Shokat, K.M. State-selective modulation of heterotrimeric G alpha s signaling with macrocyclic peptides. Cell 2022 0 0 0 6W30 33988973 Protein Tyrosine Phosphatase 1B Bound to Amorphadiene 2020-03-08 2021-05-26 Sarkar, A.,Kim, E.Y.,Jang, T.,Hongdusit, A.,Kim, H.,Choi, J.M.,Fox, J.M. Microbially Guided Discovery and Biosynthesis of Biologically Active Natural Products. Acs Synth Biol 2021 10 1505 1519 7LFO 33988973 Protein Tyrosine Phosphatase 1B 2021-01-18 2021-05-26 Sarkar, A.,Kim, E.Y.,Jang, T.,Hongdusit, A.,Kim, H.,Choi, J.M.,Fox, J.M. Microbially Guided Discovery and Biosynthesis of Biologically Active Natural Products. Acs Synth Biol 2021 10 1505 1519 7LK8 34022225 Crystal structure of KPC-2 T215P mutant 2021-02-01 2021-05-26 Furey, I.M.,Mehta, S.C.,Sankaran, B.,Hu, L.,Prasad, B.V.V.,Palzkill, T. Local interactions with the Glu166 base and the conformation of an active site loop play key roles in carbapenem hydrolysis by the KPC-2 beta-lactamase. J.Biol.Chem. 2021 296 100799 100799 7LNL 34022225 Crystal structure of KPC-2 S70G/T215P mutant with hydrolyzed imipenem 2021-02-07 2021-05-26 Furey, I.M.,Mehta, S.C.,Sankaran, B.,Hu, L.,Prasad, B.V.V.,Palzkill, T. Local interactions with the Glu166 base and the conformation of an active site loop play key roles in carbapenem hydrolysis by the KPC-2 beta-lactamase. J.Biol.Chem. 2021 296 100799 100799 7MY4 34256050 Crystal Structure of the SPA17 Docking and Dimerization Domain from Danio rerio 2021-05-20 2021-05-26 Dahlin, H.R.,Zheng, N.,Scott, J.D. Beyond PKA: Evolutionary and structural insights that define a docking and dimerization domain superfamily. J.Biol.Chem. 2021 297 100927 100927 6X5D Structure of Dickerson-Drew Dodecamer with 2'-MeSe-ara-T modification 2020-05-25 2021-06-02 Chen, C.,Fang, Z.,Huang, Z. 2'-Beta-Selenium Atom on Thymidine to Control Beta-Form DNA Conformation and Large Crystal Formation Cryst.Growth Des. 2022 22 3601 3604 6X7H 36472898 Cyanovirin-N Mutation I34Y with Dimannose bound 2020-05-30 2021-06-02 Kazan, I.C.,Sharma, P.,Rahman, M.I.,Bobkov, A.,Fromme, R.,Ghirlanda, G.,Ozkan, S.B. Design of novel cyanovirin-N variants by modulation of binding dynamics through distal mutations. Elife 2022 11 0 0 6XCX Nitric Oxide Synthase from Bacillus subtilis in complex with N2-((3-((2-aminoquinolin-7-yl)methoxy)phenoxy)methyl)pyridine-2,6-diamine 2020-06-09 2021-06-16 Lewis, M.C.,Poulos, T.L. Selective Anti-MRSA inhibitors targeting Nitric Oxide Synthase To Be Published 0 0 0 0 7KPT 34230497 Crystal structure of CtdE in complex with FAD and substrate 4 2020-11-12 2021-06-16 Liu, Z.,Zhao, F.,Zhao, B.,Yang, J.,Ferrara, J.,Sankaran, B.,Venkataram Prasad, B.V.,Kundu, B.B.,Phillips Jr., G.N.,Gao, Y.,Hu, L.,Zhu, T.,Gao, X. Structural basis of the stereoselective formation of the spirooxindole ring in the biosynthesis of citrinadins. Nat Commun 2021 12 4158 4158 7KEF 34140682 RNA polymerase II elongation complex with unnatural base dTPT3, rNaM in swing state 2020-10-10 2021-06-23 Oh, J.,Shin, J.,Unarta, I.C.,Wang, W.,Feldman, A.W.,Karadeema, R.J.,Xu, L.,Xu, J.,Chong, J.,Krishnamurthy, R.,Huang, X.,Romesberg, F.E.,Wang, D. Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II. Nat.Chem.Biol. 2021 17 906 914 6XK3 Nitric Oxide Synthase from Bacillus subtilis in complex with 7-((3-(((pyridin-2-ylmethyl)amino)methyl)phenoxy)methyl)quinolin-2-amine 2020-06-25 2021-06-30 Lewis, M.C.,Poulos, T.L. Selective Anti-MRSA inhibitors targeting Nitric Oxide Synthase To Be Published 0 0 0 0 6XK5 Nitric Oxide Synthase from Bacillus subtilis in complex with 7-((3-(((4-(6-aminopyridin-2-yl)butyl)amino)methyl)phenoxy)methyl)quinolin-2-amine 2020-06-25 2021-06-30 Lewis, M.C.,Poulos, T.L. Selective Anti-MRSA inhibitors targeting Nitric Oxide Synthase To Be Published 0 0 0 0 6XK6 Nitric Oxide Synthase from Bacillus subtilis in complex with 7-((3-(((2-(pyridin-2-yl)ethyl)amino)methyl)phenoxy)methyl)quinolin-2-amine 2020-06-25 2021-06-30 Lewis, M.C.,Poulos, T.L. Selective Anti-MRSA inhibitors targeting Nitric Oxide Synthase To Be Published 0 0 0 0 6XK8 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 7-((3-((((6-aminopyridin-2-yl)methyl)amino)methyl)phenoxy)methyl)quinolin-2-amine 2020-06-25 2021-06-30 Lewis, M.C.,Poulos, T.L. Selective Anti-MRSA inhibitors targeting Nitric Oxide Synthase To Be Published 0 0 0 0 7L99 33637650 Crystal structure of BRDT bromodomain 2 in complex with CDD-1302 2021-01-03 2021-06-30 Yu, Z.,Ku, A.F.,Anglin, J.L.,Sharma, R.,Ucisik, M.N.,Faver, J.C.,Li, F.,Nyshadham, P.,Simmons, N.,Sharma, K.L.,Nagarajan, S.,Riehle, K.,Kaur, G.,Sankaran, B.,Storl-Desmond, M.,Palmer, S.S.,Young, D.W.,Kim, C.,Matzuk, M.M. Discovery and characterization of bromodomain 2-specific inhibitors of BRDT. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7L9A 33637650 Crystal structure of BRDT bromodomain 2 in complex with CDD-1102 2021-01-03 2021-06-30 Yu, Z.,Ku, A.F.,Anglin, J.L.,Sharma, R.,Ucisik, M.N.,Faver, J.C.,Li, F.,Nyshadham, P.,Simmons, N.,Sharma, K.L.,Nagarajan, S.,Riehle, K.,Kaur, G.,Sankaran, B.,Storl-Desmond, M.,Palmer, S.S.,Young, D.W.,Kim, C.,Matzuk, M.M. Discovery and characterization of bromodomain 2-specific inhibitors of BRDT. Proc.Natl.Acad.Sci.USA 2021 118 0 0 6XER 34378386 Tubulin-RB3_SLD in complex with colchicine 2020-06-13 2021-08-25 Chen, H.,Deng, S.,Albadari, N.,Yun, M.K.,Zhang, S.,Li, Y.,Ma, D.,Parke, D.N.,Yang, L.,Seagroves, T.N.,White, S.W.,Miller, D.D.,Li, W. Design, Synthesis, and Biological Evaluation of Stable Colchicine-Binding Site Tubulin Inhibitors 6-Aryl-2-benzoyl-pyridines as Potential Anticancer Agents. J.Med.Chem. 2021 64 12049 12074 7KUL 34428345 DNA modification at 3' end of RNA primer complex with guanosine dinucleotide ligand G(5')ppp(5')G 2020-11-25 2021-09-08 Giurgiu, C.,Fang, Z.,Aitken, H.R.M.,Kim, S.C.,Pazienza, L.,Mittal, S.,Szostak, J.W. Structure-Activity Relationships in Nonenzymatic Template-Directed RNA Synthesis. Angew.Chem.Int.Ed.Engl. 2021 60 22925 22932 7L4L Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabF, and C8-crypto Acyl Carrier Protein, AcpP 2020-12-19 2021-09-22 Mindrebo, J.T.,Chen, A.,Kim, W.E.,Re, R.N.,Davis, T.D.,Noel, J.P.,Burkart, M.D. Structure and Mechanistic Analyses of the Gating Mechanism of Elongating Ketosynthases Acs Catalysis 2021 11 6787 6799 7K87 36603507 The crystal structure of the 2009 H1N1 PA endonuclease in complex with SJ000986436 2020-09-25 2021-09-29 Slavish, P.J.,Cuypers, M.G.,Rimmer, M.A.,Abdolvahabi, A.,Jeevan, T.,Kumar, G.,Jarusiewicz, J.A.,Vaithiyalingam, S.,Jones, J.C.,Bowling, J.J.,Price, J.E.,DuBois, R.M.,Min, J.,Webby, R.J.,Rankovic, Z.,White, S.W. Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential. Eur.J.Med.Chem. 2023 247 115035 115035 6WMK 35050655 Crystal structure of beta sheet heterodimer LHD29 2020-04-21 2021-11-10 Sahtoe, D.D.,Praetorius, F.,Courbet, A.,Hsia, Y.,Wicky, B.I.M.,Edman, N.I.,Miller, L.M.,Timmermans, B.J.R.,Decarreau, J.,Morris, H.M.,Kang, A.,Bera, A.K.,Baker, D. Reconfigurable asymmetric protein assemblies through implicit negative design. Science 2022 375 0 0 7KNR The crystal structure of the I38T mutant PA endonuclease (2009/H1N1/California) in complex with SJ000988558 2020-11-05 2021-11-10 Cuypers, M.G.,Slavish, P.J.,Jayaraman, S.,White, S.W. The crystal structure of the I38T mutant PA endonuclease (2009/H1N1/California) in complex with SJ000988558 To Be Published 0 0 0 0 7KNY The crystal structure of the I38T mutant PA endonuclease (2009/H1N1/California) in complex with SJ000988528 2020-11-06 2021-11-10 Cuypers, M.G.,Slavish, P.J.,Jayaraman, S.,White, S.W. The crystal structure of the I38T mutant PA endonuclease (2009/H1N1/California) in complex with SJ000988528 To Be Published 0 0 0 0 7KOP The crystal structure of the 2009/H1N1/California PA endonuclease I38T mutant in complex with SJ000988539 2020-11-09 2021-11-10 Cuypers, M.G.,Slavish, P.J.,Seetharaman, J.,White, S.W. The crystal structure of the 2009/H1N1/California PA endonuclease I38T mutant in complex with SJ000988539 To Be Published 0 0 0 0 7LTN 34426525 Crystal structure of Mpro in complex with inhibitor CDD-1713 2021-02-19 2021-11-10 Chamakuri, S.,Lu, S.,Ucisik, M.N.,Bohren, K.M.,Chen, Y.C.,Du, H.C.,Faver, J.C.,Jimmidi, R.,Li, F.,Li, J.Y.,Nyshadham, P.,Palmer, S.S.,Pollet, J.,Qin, X.,Ronca, S.E.,Sankaran, B.,Sharma, K.L.,Tan, Z.,Versteeg, L.,Yu, Z.,Matzuk, M.M.,Palzkill, T.,Young, D.W. DNA-encoded chemistry technology yields expedient access to SARS-CoV-2 M pro inhibitors. Proc.Natl.Acad.Sci.USA 2021 118 0 0 7JHQ 34817169 OXA-48 bound by Compound 2.3 2020-07-21 2021-12-01 Taylor, D.M.,Anglin, J.,Hu, L.,Wang, L.,Sankaran, B.,Wang, J.,Matzuk, M.M.,Prasad, B.V.V.,Palzkill, T. Unique Diacidic Fragments Inhibit the OXA-48 Carbapenemase and Enhance the Killing of Escherichia coli Producing OXA-48. Acs Infect Dis. 2021 7 3345 3354 7R6Z 34817169 OXA-48 bound by Compound 3.3 2021-06-24 2021-12-01 Taylor, D.M.,Anglin, J.,Hu, L.,Wang, L.,Sankaran, B.,Wang, J.,Matzuk, M.M.,Prasad, B.V.V.,Palzkill, T. Unique Diacidic Fragments Inhibit the OXA-48 Carbapenemase and Enhance the Killing of Escherichia coli Producing OXA-48. Acs Infect Dis. 2021 7 3345 3354 7KXS 36593311 Computational design of constitutively active cGAS 2020-12-04 2021-12-08 Dowling, Q.M.,Volkman, H.E.,Gray, E.E.,Ovchinnikov, S.,Cambier, S.,Bera, A.K.,Sankaran, B.,Johnson, M.R.,Bick, M.J.,Kang, A.,Stetson, D.B.,King, N.P. Computational design of constitutively active cGAS. Nat.Struct.Mol.Biol. 2023 30 72 80 7RIQ 35022237 RNA polymerase II elongation complex scaffold 1 without polyamide 2021-07-20 2022-01-12 Oh, J.,Jia, T.,Xu, J.,Chong, J.,Dervan, P.B.,Wang, D. RNA polymerase II trapped on a molecular treadmill: Structural basis of persistent transcriptional arrest by a minor groove DNA binder. Proc.Natl.Acad.Sci.USA 2022 119 0 0 7RIY 35022237 RNA polymerase II elongation complex with hairpin polyamide Py-Im 1, scaffold 2 soaked with UTP 2021-07-20 2022-01-12 Oh, J.,Jia, T.,Xu, J.,Chong, J.,Dervan, P.B.,Wang, D. RNA polymerase II trapped on a molecular treadmill: Structural basis of persistent transcriptional arrest by a minor groove DNA binder. Proc.Natl.Acad.Sci.USA 2022 119 0 0 7TE8 35145136 CA14-CBD-DB21 ternary complex 2022-01-04 2022-01-12 Cao, S.,Kang, S.,Mao, H.,Yao, J.,Gu, L.,Zheng, N. Defining molecular glues with a dual-nanobody cannabidiol sensor. Nat Commun 2022 13 815 815 7MWQ 35050655 Structure of De Novo designed beta sheet heterodimer LHD29A53/B53 2021-05-17 2022-01-19 Sahtoe, D.D.,Praetorius, F.,Courbet, A.,Hsia, Y.,Wicky, B.I.M.,Edman, N.I.,Miller, L.M.,Timmermans, B.J.R.,Decarreau, J.,Morris, H.M.,Kang, A.,Bera, A.K.,Baker, D. Reconfigurable asymmetric protein assemblies through implicit negative design. Science 2022 375 0 0 7MWR 35050655 Structure of De Novo designed beta sheet heterodimer LHD101A53/B4 2021-05-17 2022-01-19 Sahtoe, D.D.,Praetorius, F.,Courbet, A.,Hsia, Y.,Wicky, B.I.M.,Edman, N.I.,Miller, L.M.,Timmermans, B.J.R.,Decarreau, J.,Morris, H.M.,Kang, A.,Bera, A.K.,Baker, D. Reconfigurable asymmetric protein assemblies through implicit negative design. Science 2022 375 0 0 7LM4 36603507 The crystal structure of the I38T mutant PA Endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988503 2021-02-05 2022-02-09 Slavish, P.J.,Cuypers, M.G.,Rimmer, M.A.,Abdolvahabi, A.,Jeevan, T.,Kumar, G.,Jarusiewicz, J.A.,Vaithiyalingam, S.,Jones, J.C.,Bowling, J.J.,Price, J.E.,DuBois, R.M.,Min, J.,Webby, R.J.,Rankovic, Z.,White, S.W. Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential. Eur.J.Med.Chem. 2023 247 115035 115035 7E5E 36170854 Crystal structure of GDP-bound GNAS in complex with the cyclic peptide inhibitor GD20 2021-02-18 2022-03-02 Dai, S.A.,Hu, Q.,Gao, R.,Blythe, E.E.,Touhara, K.K.,Peacock, H.,Zhang, Z.,von Zastrow, M.,Suga, H.,Shokat, K.M. State-selective modulation of heterotrimeric G alpha s signaling with macrocyclic peptides. Cell 2022 185 3950 0 7LZ3 36593311 Computational design of constitutively active cGAS 2021-03-08 2022-03-16 Dowling, Q.M.,Volkman, H.E.,Gray, E.E.,Ovchinnikov, S.,Cambier, S.,Bera, A.K.,Sankaran, B.,Johnson, M.R.,Bick, M.J.,Kang, A.,Stetson, D.B.,King, N.P. Computational design of constitutively active cGAS. Nat.Struct.Mol.Biol. 2023 30 72 80 7S7L 35101440 Complex of tissue inhibitor of metalloproteinases-1 (TIMP-1) mutant (L34G/M66S/E67Y/L133N/S155L) with matrix metalloproteinase-3 catalytic domain (MMP-3cd) 2021-09-16 2022-03-16 Raeeszadeh-Sarmazdeh, M.,Coban, M.,Mahajan, S.,Hockla, A.,Sankaran, B.,Downey, G.P.,Radisky, D.C.,Radisky, E.S. Engineering of tissue inhibitor of metalloproteinases TIMP-1 for fine discrimination between closely related stromelysins MMP-3 and MMP-10. J.Biol.Chem. 2022 298 101654 101654 7S7M 35101440 Complex of tissue inhibitor of metalloproteinases-1 (TIMP-1) mutant (L34G/M66D/T98G/P131S/Q153N) with matrix metalloproteinase-3 catalytic domain (MMP-3cd) 2021-09-16 2022-03-16 Raeeszadeh-Sarmazdeh, M.,Coban, M.,Mahajan, S.,Hockla, A.,Sankaran, B.,Downey, G.P.,Radisky, D.C.,Radisky, E.S. Engineering of tissue inhibitor of metalloproteinases TIMP-1 for fine discrimination between closely related stromelysins MMP-3 and MMP-10. J.Biol.Chem. 2022 298 101654 101654 7SA1 35484202 LRR-F-Box plant ubiquitin ligase 2021-09-21 2022-04-20 Tal, L.,Palayam, M.,Ron, M.,Young, A.,Britt, A.,Shabek, N. A conformational switch in the SCF-D3/MAX2 ubiquitin ligase facilitates strigolactone signalling. Nat.Plants 2022 8 561 573 7RKC 35862457 Computationally designed tunable C2 symmetric tandem repeat homodimer, D_3_633 2021-07-22 2022-05-18 Hicks, D.R.,Kennedy, M.A.,Thompson, K.A.,DeWitt, M.,Coventry, B.,Kang, A.,Bera, A.K.,Brunette, T.J.,Sankaran, B.,Stoddard, B.,Baker, D. De novo design of protein homodimers containing tunable symmetric protein pockets. Proc.Natl.Acad.Sci.USA 2022 119 0 0 7TS8 35772285 Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with 4-chloro-6-((5-(2-(dimethylamino)ethyl)-2,3-difluorophenyl)ethynyl)pyridin-2-amine 2022-01-31 2022-07-13 Vasu, D.,Li, H.,Hardy, C.D.,Poulos, T.L.,Silverman, R.B. 2-Aminopyridines with a shortened amino sidechain as potent, selective, and highly permeable human neuronal nitric oxide synthase inhibitors. Bioorg.Med.Chem. 2022 69 116878 116878 7RDN 36271106 Crystal structure of S. cerevisiae pre-mRNA leakage protein 39 (Pml39) 2021-07-09 2022-07-27 Hashimoto, H.,Ramirez, D.H.,Lautier, O.,Pawlak, N.,Blobel, G.,Palancade, B.,Debler, E.W. Structure of the pre-mRNA leakage 39-kDa protein reveals a single domain of integrated zf-C3HC and Rsm1 modules. Sci Rep 2022 12 17691 17691 7UFA 35806297 CYP3A4 bound to an inhibitor 2022-03-22 2022-07-27 Samuels, E.R.,Sevrioukova, I.F. Interaction of CYP3A4 with Rationally Designed Ritonavir Analogues: Impact of Steric Constraints Imposed on the Heme-Ligating Group and the End-Pyridine Attachment. Int J Mol Sci 2022 23 0 0 7RMX 35862457 Structure of De Novo designed tunable symmetric protein pockets 2021-07-28 2022-08-03 Hicks, D.R.,Kennedy, M.A.,Thompson, K.A.,DeWitt, M.,Coventry, B.,Kang, A.,Bera, A.K.,Brunette, T.J.,Sankaran, B.,Stoddard, B.,Baker, D. De novo design of protein homodimers containing tunable symmetric protein pockets. Proc.Natl.Acad.Sci.USA 2022 119 0 0 7RMY 35862457 De Novo designed tunable protein pockets, D_3-337 2021-07-28 2022-08-03 Hicks, D.R.,Kennedy, M.A.,Thompson, K.A.,DeWitt, M.,Coventry, B.,Kang, A.,Bera, A.K.,Brunette, T.J.,Sankaran, B.,Stoddard, B.,Baker, D. De novo design of protein homodimers containing tunable symmetric protein pockets. Proc.Natl.Acad.Sci.USA 2022 119 0 0 7SQI 36048156 Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and C14-crypto Acyl Carrier Protein, AcpP 2021-11-05 2022-08-03 Chen, A.,Mindrebo, J.T.,Davis, T.D.,Kim, W.E.,Katsuyama, Y.,Jiang, Z.,Ohnishi, Y.,Noel, J.P.,Burkart, M.D. Mechanism-based cross-linking probes capture the Escherichia coli ketosynthase FabB in conformationally distinct catalytic states. Acta Crystallogr D Struct Biol 2022 78 1171 1179 7TLE 35864332 Crystal Structure of small molecule beta-lactone 1 covalently bound to K-Ras(G12S) 2022-01-18 2022-08-03 Zhang, Z.,Guiley, K.Z.,Shokat, K.M. Chemical acylation of an acquired serine suppresses oncogenic signaling of K-Ras(G12S). Nat.Chem.Biol. 2022 18 1177 1183 7TLG 35864332 Crystal Structure of small molecule beta-lactone 5 covalently bound to K-Ras(G12S) 2022-01-18 2022-08-03 Zhang, Z.,Guiley, K.Z.,Shokat, K.M. Chemical acylation of an acquired serine suppresses oncogenic signaling of K-Ras(G12S). Nat.Chem.Biol. 2022 18 1177 1183 7TLK 35864332 Crystal Structure of K-Ras(G12S) 2022-01-18 2022-08-03 Zhang, Z.,Guiley, K.Z.,Shokat, K.M. Chemical acylation of an acquired serine suppresses oncogenic signaling of K-Ras(G12S). Nat.Chem.Biol. 2022 18 1177 1183 7LR9 Crystal structure of KPC-2 S70G/T215P mutant with hydrolyzed imipenem 2021-02-16 2022-08-10 Furey, I.M.,Palzkill, T. Crystal structure of KPC-2 T215P mutant To Be Published 0 0 0 0 8DT0 35862514 Scaffolding protein functional sites using deep learning 2022-07-24 2022-08-10 Wang, J.,Lisanza, S.,Juergens, D.,Tischer, D.,Watson, J.L.,Castro, K.M.,Ragotte, R.,Saragovi, A.,Milles, L.F.,Baek, M.,Anishchenko, I.,Yang, W.,Hicks, D.R.,Exposit, M.,Schlichthaerle, T.,Chun, J.H.,Dauparas, J.,Bennett, N.,Wicky, B.I.M.,Muenks, A.,DiMaio, F.,Correia, B.,Ovchinnikov, S.,Baker, D. Scaffolding protein functional sites using deep learning. Science 2022 377 387 394 7RQT THE B-DNA DODECAMER With HIGH RESOLUTION 2021-08-08 2022-08-17 Chen, C.,Fang, Z.,Huang, Z. 2'-beta-Selenium Atom on Thymidine to Control beta-Form DNA Conformation and Large Crystal Formation Cryst.Growth Des. 2022 0 0 0 7LV3 35929723 Crystal structure of human protein kinase G (PKG) R-C complex in inhibited state 2021-02-23 2022-08-24 Sharma, R.,Kim, J.J.,Qin, L.,Henning, P.,Akimoto, M.,VanSchouwen, B.,Kaur, G.,Sankaran, B.,MacKenzie, K.R.,Melacini, G.,Casteel, D.E.,Herberg, F.W.,Kim, C.W. An auto-inhibited state of protein kinase G and implications for selective activation. Elife 2022 11 0 0 7RSR 36124684 Kod-RI incorporating PMT, n+2 2021-08-11 2022-08-24 Hajjar, M.,Chim, N.,Liu, C.,Herdewijn, P.,Chaput, J.C. Crystallographic analysis of engineered polymerases synthesizing phosphonomethylthreosyl nucleic acid. Nucleic Acids Res. 2022 50 9663 9674 8CX5 36001446 Crystal Structure of small molecule alpha,beta-ketoamide 4 covalently bound to K-Ras(G12R) 2022-05-19 2022-08-31 Zhang, Z.,Morstein, J.,Ecker, A.K.,Guiley, K.Z.,Shokat, K.M. Chemoselective Covalent Modification of K-Ras(G12R) with a Small Molecule Electrophile. J.Am.Chem.Soc. 2022 144 15916 15921 8CXL 35985031 Structure of NapH3, a vanadium-dependent haloperoxidase homolog catalyzing the stereospecific alpha-hydroxyketone rearrangement reaction in napyradiomycin biosynthesis 2022-05-21 2022-08-31 Chen, P.Y.,Adak, S.,Chekan, J.R.,Liscombe, D.K.,Miyanaga, A.,Bernhardt, P.,Diethelm, S.,Fielding, E.N.,George, J.H.,Miles, Z.D.,Murray, L.A.M.,Steele, T.S.,Winter, J.M.,Noel, J.P.,Moore, B.S. Structural Basis of Stereospecific Vanadium-Dependent Haloperoxidase Family Enzymes in Napyradiomycin Biosynthesis. Biochemistry 2022 61 1844 1852 7S3X Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-((3-(((pyridin-2-ylmethyl)amino)methyl)phenoxy)methyl)quinolin-2-amine 2021-09-08 2022-09-14 Lewis, M.C.,Weerawarna, P.M.,Li, H.,Murarka, V.,Silverman, R.B.,Poulos, T.L. Selective anti-MRSA inhibitors targetting bacterial nitric oxide synthase To be published 0 0 0 0 7S3Y Structure ofrat neuronal nitric oxide synthase heme domain in complex with 7-((3-(2-(6-aminopyridin-2-yl)ethyl)phenoxy)methyl)quinolin-2-amine 2021-09-08 2022-09-14 Lewis, M.C.,Weerawarna, P.M.,Li, H.,Murarka, V.,Silverman, R.B.,Poulos, T.L. Selective anti-MRSA inhibitors targeting bacterial nitric oxide synthase To be published 0 0 0 0 7TVW 36172078 Crystal structure of Arabidopsis thaliana DLK2 2022-02-06 2022-09-28 Burger, M.,Honda, K.,Kondoh, Y.,Hong, S.,Watanabe, N.,Osada, H.,Chory, J. Crystal structure of Arabidopsis DWARF14-LIKE2 (DLK2) reveals a distinct substrate binding pocket architecture. Plant Direct 2022 6 0 0 8CYK 36108050 Crystal structure of hallucinated protein HALC1_878 2022-05-23 2022-09-28 Dauparas, J.,Anishchenko, I.,Bennett, N.,Bai, H.,Ragotte, R.J.,Milles, L.F.,Wicky, B.I.M.,Courbet, A.,de Haas, R.J.,Bethel, N.,Leung, P.J.Y.,Huddy, T.F.,Pellock, S.,Tischer, D.,Chan, F.,Koepnick, B.,Nguyen, H.,Kang, A.,Sankaran, B.,Bera, A.K.,King, N.P.,Baker, D. Robust deep learning-based protein sequence design using ProteinMPNN. Science 2022 378 49 56 7UQ0 37747938 Putative periplasmic iron siderophore binding protein FecB (Rv3044) from Mycobacterium tuberculosis 2022-04-18 2022-10-05 de Miranda, R.,Cuthbert, B.J.,Klevorn, T.,Chao, A.,Mendoza, J.,Arbing, M.,Sieminski, P.J.,Papavinasasundaram, K.,Abdul-Hafiz, S.,Chan, S.,Sassetti, C.M.,Ehrt, S.,Goulding, C.W. Differentiating the roles of Mycobacterium tuberculosis substrate binding proteins, FecB and FecB2, in iron uptake. Plos Pathog. 2023 19 0 0 8DC4 36197521 Crystal structure of p53 Y220C covalently bound to carbazole KG3 2022-06-15 2022-10-12 Guiley, K.Z.,Shokat, K.M. A Small Molecule Reacts with the p53 Somatic Mutant Y220C to Rescue Wild-type Thermal Stability. Cancer Discov 2023 13 56 69 8DC6 36197521 Crystal structure of p53 Y220C covalently bound to indole KG6 2022-06-15 2022-10-12 Guiley, K.Z.,Shokat, K.M. A Small Molecule Reacts with the p53 Somatic Mutant Y220C to Rescue Wild-type Thermal Stability. Cancer Discov 2023 13 56 69 8DC7 36197521 Crystal structure of p53 Y220C covalently bound to indole KG10 2022-06-15 2022-10-12 Guiley, K.Z.,Shokat, K.M. A Small Molecule Reacts with the p53 Somatic Mutant Y220C to Rescue Wild-type Thermal Stability. Cancer Discov 2023 13 56 69 8DC8 36197521 Crystal structure of p53 Y220C covalently bound to azaindole KG13 2022-06-15 2022-10-12 Guiley, K.Z.,Shokat, K.M. A Small Molecule Reacts with the p53 Somatic Mutant Y220C to Rescue Wild-type Thermal Stability. Cancer Discov 2023 13 56 69 7ST4 Calcium-saturated jGCaMP8.410.80 2021-11-11 2022-11-16 Zhang, Y.,Rozsa, M.,Liang, Y.,Bushey, D.,Wei, Z.,Zheng, J.,Reep, D.,Broussard, G.J.,Tsang, A.,Tsegaye, G.,Narayan, S.,Obara, C.J.,Lim, J.X.,Patel, R.,Zhang, R.,Ahrens, M.B.,Turner, G.C.,Wang, S.S.H.,Korff, W.L.,Schreiter, E.R.,Svoboda, K.,Hasseman, J.P.,Kolb, I.,Looger, L.L. Fast and sensitive GCaMP calcium indicators for imaging neural populations Nature 2023 615 884 891 7SZ9 36048156 Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and C16:1-crypto Acyl Carrier Protein, AcpP 2021-11-26 2022-11-23 Chen, A.,Mindrebo, J.T.,Davis, T.D.,Kim, W.E.,Katsuyama, Y.,Jiang, Z.,Ohnishi, Y.,Noel, J.P.,Burkart, M.D. Mechanism-based cross-linking probes capture the Escherichia coli ketosynthase FabB in conformationally distinct catalytic states. Acta Crystallogr D Struct Biol 2022 78 1171 1179 7S5S 36344533 CTX-M-15 WT in complex with BLIP WT 2021-09-11 2022-11-30 Lu, S.,Hu, L.,Lin, H.,Judge, A.,Rivera, P.,Palaniappan, M.,Sankaran, B.,Wang, J.,Prasad, B.V.V.,Palzkill, T. An active site loop toggles between conformations to control antibiotic hydrolysis and inhibition potency for CTX-M beta-lactamase drug-resistance enzymes. Nat Commun 2022 13 6726 6726 8EDC Structure of C. elegans UNC-5 IG 1+2 Domains 2022-09-04 2023-01-11 Priest, J.M.,Ozkan, E. Structure of C. elegans UNC-5 IG 1+2 Domains To Be Published 0 0 0 0 7UON 36635385 CTX-M-14 Y105W mutant 2022-04-13 2023-01-25 Judge, A.,Hu, L.,Sankaran, B.,Van Riper, J.,Venkataram Prasad, B.V.,Palzkill, T. Mapping the determinants of catalysis and substrate specificity of the antibiotic resistance enzyme CTX-M beta-lactamase. Commun Biol 2023 6 35 35 8DH4 36635281 T7 RNA polymerase elongation complex with unnatural base dPa-DsTP pair 2022-06-24 2023-02-01 Oh, J.,Kimoto, M.,Xu, H.,Chong, J.,Hirao, I.,Wang, D. Structural basis of transcription recognition of a hydrophobic unnatural base pair by T7 RNA polymerase. Nat Commun 2023 14 195 195 8EUK 36779970 cytochrome P450terp (cyp108A1) bound to ethylene glycol 2022-10-18 2023-02-22 Gable, J.A.,Poulos, T.L.,Follmer, A.H. Cooperative Substrate Binding Controls Catalysis in Bacterial Cytochrome P450terp (CYP108A1). J.Am.Chem.Soc. 2023 0 0 0 8EUL 36779970 cytochrome P450terp (cyp108A1) mutant F188A bound to alpha-terpineol 2022-10-18 2023-02-22 Gable, J.A.,Poulos, T.L.,Follmer, A.H. Cooperative Substrate Binding Controls Catalysis in Bacterial Cytochrome P450terp (CYP108A1). J.Am.Chem.Soc. 2023 0 0 0 8EAW An asymmetric disk assembly formed by tandem dimers of the tobacco mosaic viral capsid protein (TMV) 2022-08-29 2023-03-01 Dai, J.,Wilhelm, K.B.,Bischoff, A.J.,Pereira, J.H.,Dedeo, M.T.,Garcia-Almedina, D.M.,Adams, P.D.,Groves, J.T.,Francis, M.B. A Membrane-Associated Light-Harvesting Model is Enabled by Functionalized Assemblies of Gene-Doubled TMV Proteins Small 2023 0 2207805 0 8DBB 36805127 Crystal structure of DDT with the selective inhibitor 2,5-Pyridinedicarboxylic Acid 2022-06-14 2023-03-08 Parkins, A.,Das, P.,Prahaladan, V.,Rangel, V.M.,Xue, L.,Sankaran, B.,Bhandari, V.,Pantouris, G. 2,5-Pyridinedicarboxylic acid is a bioactive and highly selective inhibitor of D-dopachrome tautomerase. Structure 2023 31 355 0 8DB3 36949197 Crystal structure of KaiC with truncated C-terminal coiled-coil domain 2022-06-14 2023-03-22 Pitsawong, W.,Padua, R.A.P.,Grant, T.,Hoemberger, M.,Otten, R.,Bradshaw, N.,Grigorieff, N.,Kern, D. From primordial clocks to circadian oscillators. Nature 2023 616 183 189 8DBA 36949197 Crystal structure of dodecameric KaiC 2022-06-14 2023-03-22 Pitsawong, W.,Padua, R.A.P.,Grant, T.,Hoemberger, M.,Otten, R.,Bradshaw, N.,Grigorieff, N.,Kern, D. From primordial clocks to circadian oscillators. Nature 2023 616 183 189 8FBK 36888664 Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains 2022-11-29 2023-03-22 Wang, J.Y.J.,Khmelinskaia, A.,Sheffler, W.,Miranda, M.C.,Antanasijevic, A.,Borst, A.J.,Torres, S.V.,Shu, C.,Hsia, Y.,Nattermann, U.,Ellis, D.,Walkey, C.,Ahlrichs, M.,Chan, S.,Kang, A.,Nguyen, H.,Sydeman, C.,Sankaran, B.,Wu, M.,Bera, A.K.,Carter, L.,Fiala, B.,Murphy, M.,Baker, D.,Ward, A.B.,King, N.P. Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8FBN 36888664 Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains 2022-11-29 2023-03-22 Wang, J.Y.J.,Khmelinskaia, A.,Sheffler, W.,Miranda, M.C.,Antanasijevic, A.,Borst, A.J.,Torres, S.V.,Shu, C.,Hsia, Y.,Nattermann, U.,Ellis, D.,Walkey, C.,Ahlrichs, M.,Chan, S.,Kang, A.,Nguyen, H.,Sydeman, C.,Sankaran, B.,Wu, M.,Bera, A.K.,Carter, L.,Fiala, B.,Murphy, M.,Baker, D.,Ward, A.B.,King, N.P. Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8FBO 36888664 Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains 2022-11-29 2023-03-22 Wang, J.Y.J.,Khmelinskaia, A.,Sheffler, W.,Miranda, M.C.,Antanasijevic, A.,Borst, A.J.,Torres, S.V.,Shu, C.,Hsia, Y.,Nattermann, U.,Ellis, D.,Walkey, C.,Ahlrichs, M.,Chan, S.,Kang, A.,Nguyen, H.,Sydeman, C.,Sankaran, B.,Wu, M.,Bera, A.K.,Carter, L.,Fiala, B.,Murphy, M.,Baker, D.,Ward, A.B.,King, N.P. Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8DOD 36963495 Beta-lactamase CTX-M-14 S130A 2022-07-12 2023-04-05 Lu, S.,Montoya, M.,Hu, L.,Neetu, N.,Sankaran, B.,Prasad, B.V.V.,Palzkill, T. Mutagenesis and structural analysis reveal the CTX-M beta-lactamase active site is optimized for cephalosporin catalysis and drug resistance. J.Biol.Chem. 2023 299 104630 104630 8DOE 36963495 Crystal Structure of CTX-M-14 N106A 2022-07-12 2023-04-05 Lu, S.,Montoya, M.,Hu, L.,Neetu, N.,Sankaran, B.,Prasad, B.V.V.,Palzkill, T. Mutagenesis and structural analysis reveal the CTX-M beta-lactamase active site is optimized for cephalosporin catalysis and drug resistance. J.Biol.Chem. 2023 299 104630 104630 8DON 36963495 Beta-lactamase CTX-M-14 T215A 2022-07-13 2023-04-05 Lu, S.,Montoya, M.,Hu, L.,Neetu, N.,Sankaran, B.,Prasad, B.V.V.,Palzkill, T. Mutagenesis and structural analysis reveal the CTX-M beta-lactamase active site is optimized for cephalosporin catalysis and drug resistance. J.Biol.Chem. 2023 299 104630 104630 8DP4 36963495 Beta-lactamase CTX-M-14 T235A 2022-07-14 2023-04-05 Lu, S.,Montoya, M.,Hu, L.,Neetu, N.,Sankaran, B.,Prasad, B.V.V.,Palzkill, T. Mutagenesis and structural analysis reveal the CTX-M beta-lactamase active site is optimized for cephalosporin catalysis and drug resistance. J.Biol.Chem. 2023 299 104630 104630 8DPQ 36963495 Beta-lactamase CTX-M-14 N170A 2022-07-15 2023-04-05 Lu, S.,Montoya, M.,Hu, L.,Neetu, N.,Sankaran, B.,Prasad, B.V.V.,Palzkill, T. Mutagenesis and structural analysis reveal the CTX-M beta-lactamase active site is optimized for cephalosporin catalysis and drug resistance. J.Biol.Chem. 2023 299 104630 104630 8ELA 36963495 CTX-M-14 beta-lactamase mutant - N132A w MES 2022-09-23 2023-04-05 Lu, S.,Montoya, M.,Hu, L.,Neetu, N.,Sankaran, B.,Prasad, B.V.V.,Palzkill, T. Mutagenesis and structural analysis reveal the CTX-M beta-lactamase active site is optimized for cephalosporin catalysis and drug resistance. J.Biol.Chem. 2023 299 104630 104630 8ELB 36963495 CTX-M-14 beta-lactamase mutant- N132A 2022-09-23 2023-04-05 Lu, S.,Montoya, M.,Hu, L.,Neetu, N.,Sankaran, B.,Prasad, B.V.V.,Palzkill, T. Mutagenesis and structural analysis reveal the CTX-M beta-lactamase active site is optimized for cephalosporin catalysis and drug resistance. J.Biol.Chem. 2023 299 104630 104630 8DJ1 36996107 Crystal structure of NavAb V126T as a basis for the human Nav1.7 Inherited Erythromelalgia S241T mutation 2022-06-29 2023-04-12 Wisedchaisri, G.,Gamal El-Din, T.M.,Zheng, N.,Catterall, W.A. Structural basis for severe pain caused by mutations in the S4-S5 linkers of voltage-gated sodium channel Na V 1.7. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8FFT 37497377 Structure of GntC, a PLP-dependent enzyme catalyzing L-enduracididine biosynthesis from (S)-4-hydroxy-L-arginine 2022-12-10 2023-04-12 Cordoza, J.L.,Chen, P.Y.,Blaustein, L.R.,Lima, S.T.,Fiore, M.F.,Chekan, J.R.,Moore, B.S.,McKinnie, S.M.K. Mechanistic and Structural Insights into a Divergent PLP-Dependent l-Enduracididine Cyclase from a Toxic Cyanobacterium. Acs Catalysis 2023 13 9817 9828 7UOC 37061839 Crystal structure of Orobanche minor KAI2d4 2022-04-12 2023-04-19 Takei, S.,Uchiyama, Y.,Burger, M.,Suzuki, T.,Okabe, S.,Chory, J.,Seto, Y. A Divergent Clade KAI2 Protein in the Root Parasitic Plant Orobanche minor Is a Highly Sensitive Strigolactone Receptor and Is Involved in the Perception of Sesquiterpene Lactones. Plant Cell.Physiol. 2023 64 996 1007 7ULG recombinant alpha cobra toxin 2022-04-04 2023-05-03 Xu, J.,Lei, X.,Chen, L. Structure of recombinant alpha cobra toxin at 1.57 Angstroms To Be Published 0 0 0 0 8DLC 37172720 Crystal structure of chalcone-isomerase like protein from Vitis vinifera (VvCHIL) 2022-07-07 2023-05-10 Wolf-Saxon, E.R.,Moorman, C.C.,Castro, A.,Ruiz-Rivera, A.,Mallari, J.P.,Burke, J.R. Regulatory ligand binding in plant chalcone isomerase-like (CHIL) proteins. J.Biol.Chem. 2023 299 104804 104804 8DLD 37172720 Crystal structure of chalcone-isomerase like protein from Physcomitrella patens (PpCHIL-A) 2022-07-07 2023-05-10 Wolf-Saxon, E.R.,Moorman, C.C.,Castro, A.,Ruiz-Rivera, A.,Mallari, J.P.,Burke, J.R. Regulatory ligand binding in plant chalcone isomerase-like (CHIL) proteins. J.Biol.Chem. 2023 299 104804 104804 8FBC 37138074 Crystal structure of P450T2 2022-11-29 2023-05-10 Huang, J.,Quest, A.,Cruz-Morales, P.,Deng, K.,Pereira, J.H.,Van Cura, D.,Kakumanu, R.,Baidoo, E.E.K.,Dan, Q.,Chen, Y.,Petzold, C.J.,Northen, T.R.,Adams, P.D.,Clark, D.S.,Balskus, E.P.,Hartwig, J.F.,Mukhopadhyay, A.,Keasling, J.D. Complete integration of carbene-transfer chemistry into biosynthesis. Nature 2023 617 403 408 8FBU Crystal structure of Cryptosporidium parvum N-myristoyltransferase with bound myristoyl-CoA and Compound-2 2022-11-30 2023-05-31 Staker, B.L.,Fenwick, M. Crystal structure of Cryptosporidium parvum N-myristoyltransferase with bound myristoyl-CoA To Be Published 0 0 0 0 8E4T 37310965 Crystal structure of the kinase domain of RTKC8 from the choanoflagellate Monosiga brevicollis 2022-08-18 2023-06-21 Bajaj, T.,Kuriyan, J.,Gee, C.L. Crystal structure of the kinase domain of a receptor tyrosine kinase from a choanoflagellate, Monosiga brevicollis. Plos One 2023 18 0 0 8F28 37243709 Lysozyme Structures from Single-Entity Crystallization Method NanoAC 2022-11-07 2023-07-05 Yang, R.,Kvetny, M.,Brown, W.,Ogbonna, E.N.,Wang, G. A Single-Entity Method for Actively Controlled Nucleation and High-Quality Protein Crystal Synthesis. Anal.Chem. 2023 95 9462 9470 8DLE Crosslinked Crystal Structure of the 8-amino-7-oxonanoate synthase, BioF, and Benzene Sulfonyl Fluoride-crypto Acyl Carrier Protein, BSF-ACP 2022-07-07 2023-07-12 Chen, A.,Davis, T.D.,Re, R.N.,Louie, G.V.,Bowman, M.E.,Tran, K.,Clarke, D.J.,MacKay, C.L.,Campopiano, D.J.,Noel, J.P.,Burkart, M.D. Crosslinked Crystal Structure of the 8-amino-7-oxonanoate synthase, BioF, and Benzene Sulfonyl Fluoride-crypto Acyl Carrier Protein, BSF-ACP. To Be Published 0 0 0 0 7UR9 37542196 SARS-Cov2 Main protease in complex with inhibitor CDD-1845 2022-04-21 2023-07-26 Jimmidi, R.,Chamakuri, S.,Lu, S.,Ucisik, M.N.,Chen, P.J.,Bohren, K.M.,Moghadasi, S.A.,Versteeg, L.,Nnabuife, C.,Li, J.Y.,Qin, X.,Chen, Y.C.,Faver, J.C.,Nyshadham, P.,Sharma, K.L.,Sankaran, B.,Judge, A.,Yu, Z.,Li, F.,Pollet, J.,Harris, R.S.,Matzuk, M.M.,Palzkill, T.,Young, D.W. DNA-encoded chemical libraries yield non-covalent and non-peptidic SARS-CoV-2 main protease inhibitors. Commun Chem 2023 6 164 164 7URB 37542196 Sars-Cov2 Main Protease in complex with CDD-1733 2022-04-21 2023-07-26 Jimmidi, R.,Chamakuri, S.,Lu, S.,Ucisik, M.N.,Chen, P.J.,Bohren, K.M.,Moghadasi, S.A.,Versteeg, L.,Nnabuife, C.,Li, J.Y.,Qin, X.,Chen, Y.C.,Faver, J.C.,Nyshadham, P.,Sharma, K.L.,Sankaran, B.,Judge, A.,Yu, Z.,Li, F.,Pollet, J.,Harris, R.S.,Matzuk, M.M.,Palzkill, T.,Young, D.W. DNA-encoded chemical libraries yield non-covalent and non-peptidic SARS-CoV-2 main protease inhibitors. Commun Chem 2023 6 164 164 7US4 37542196 Sars-Cov2 Main Protease in complex with CDD-1819 2022-04-22 2023-07-26 Jimmidi, R.,Chamakuri, S.,Lu, S.,Ucisik, M.N.,Chen, P.J.,Bohren, K.M.,Moghadasi, S.A.,Versteeg, L.,Nnabuife, C.,Li, J.Y.,Qin, X.,Chen, Y.C.,Faver, J.C.,Nyshadham, P.,Sharma, K.L.,Sankaran, B.,Judge, A.,Yu, Z.,Li, F.,Pollet, J.,Harris, R.S.,Matzuk, M.M.,Palzkill, T.,Young, D.W. DNA-encoded chemical libraries yield non-covalent and non-peptidic SARS-CoV-2 main protease inhibitors. Commun Chem 2023 6 164 164 8EOV 37667012 Precisely patterned nanofibers made from extendable protein multiplexes 2022-10-04 2023-08-16 Bethel, N.P.,Borst, A.J.,Parmeggiani, F.,Bick, M.J.,Brunette, T.J.,Nguyen, H.,Kang, A.,Bera, A.K.,Carter, L.,Miranda, M.C.,Kibler, R.D.,Lamb, M.,Li, X.,Sankaran, B.,Baker, D. Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem. 2023 15 1664 1671 8FIQ 37590357 Multi-state design of two-state switchable hinge proteins 2022-12-16 2023-08-16 Praetorius, F.,Leung, P.J.Y.,Tessmer, M.H.,Broerman, A.,Demakis, C.,Dishman, A.F.,Pillai, A.,Idris, A.,Juergens, D.,Dauparas, J.,Li, X.,Levine, P.M.,Lamb, M.,Ballard, R.K.,Gerben, S.R.,Nguyen, H.,Kang, A.,Sankaran, B.,Bera, A.K.,Volkman, B.F.,Nivala, J.,Stoll, S.,Baker, D. Design of stimulus-responsive two-state hinge proteins. Science 2023 381 754 760 8FIT 37590357 Multi-state design of two-state switchable hinge proteins 2022-12-16 2023-08-16 Praetorius, F.,Leung, P.J.Y.,Tessmer, M.H.,Broerman, A.,Demakis, C.,Dishman, A.F.,Pillai, A.,Idris, A.,Juergens, D.,Dauparas, J.,Li, X.,Levine, P.M.,Lamb, M.,Ballard, R.K.,Gerben, S.R.,Nguyen, H.,Kang, A.,Sankaran, B.,Bera, A.K.,Volkman, B.F.,Nivala, J.,Stoll, S.,Baker, D. Design of stimulus-responsive two-state hinge proteins. Science 2023 381 754 760 8FW7 37814071 Histone from Bdellovibrio bacteriovorus bound to dsDNA 2023-01-20 2023-08-30 Hocher, A.,Laursen, S.P.,Radford, P.,Tyson, J.,Lambert, C.,Stevens, K.M.,Montoya, A.,Shliaha, P.V.,Picardeau, M.,Sockett, R.E.,Luger, K.,Warnecke, T. Histones with an unconventional DNA-binding mode in vitro are major chromatin constituents in the bacterium Bdellovibrio bacteriovorus. Nat Microbiol 2023 8 2006 2019 8SSP 37590418 AurA bound to danusertib and activating monobody Mb1 2023-05-08 2023-09-06 Kim, C.,Ludewig, H.,Hadzipasic, A.,Kutter, S.,Nguyen, V.,Kern, D. A biophysical framework for double-drugging kinases. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8FGE 37433128 Structure of rat neuronal nitric oxide synthase R349A mutant heme domain in complex with 4-(difluoromethyl)-6-(5-(2-(dimethylamino)ethyl)-2,3-difluorophenethyl)pyridin-2-amine dihydrochloride 2022-12-12 2023-10-11 Vasu, D.,Do, H.T.,Li, H.,Hardy, C.D.,Awasthi, A.,Poulos, T.L.,Silverman, R.B. Potent, Selective, and Membrane Permeable 2-Amino-4-Substituted Pyridine-Based Neuronal Nitric Oxide Synthase Inhibitors. J.Med.Chem. 2023 66 9934 9953 8FGI 37433128 Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with 4-(5-(2-(dimethylamino)ethyl)-2,3-difluorophenethyl)-6-methylpyrimidin-2-amine 2022-12-12 2023-10-11 Vasu, D.,Do, H.T.,Li, H.,Hardy, C.D.,Awasthi, A.,Poulos, T.L.,Silverman, R.B. Potent, Selective, and Membrane Permeable 2-Amino-4-Substituted Pyridine-Based Neuronal Nitric Oxide Synthase Inhibitors. J.Med.Chem. 2023 66 9934 9953 8FGN 37433128 Structure of human endothelial nitric oxide synthase heme domain in complex with 6-(5-(2-(dimethylamino)ethyl)-2,3-difluorophenethyl)pyridin-2-amine 2022-12-12 2023-10-11 Vasu, D.,Do, H.T.,Li, H.,Hardy, C.D.,Awasthi, A.,Poulos, T.L.,Silverman, R.B. Potent, Selective, and Membrane Permeable 2-Amino-4-Substituted Pyridine-Based Neuronal Nitric Oxide Synthase Inhibitors. J.Med.Chem. 2023 66 9934 9953 8FGQ 37433128 Structure of human endothelial nitric oxide synthase heme domain in complex with 4-(5-(2-(dimethylamino)ethyl)-2,3-difluorophenethyl)-6-methylpyrimidin-2-amine 2022-12-12 2023-10-11 Vasu, D.,Do, H.T.,Li, H.,Hardy, C.D.,Awasthi, A.,Poulos, T.L.,Silverman, R.B. Potent, Selective, and Membrane Permeable 2-Amino-4-Substituted Pyridine-Based Neuronal Nitric Oxide Synthase Inhibitors. J.Med.Chem. 2023 66 9934 9953 8TKN 37759710 Murine NF-kappaB p50 Rel Homology Region homodimer in complex with 10-mer kappaB DNA from human Neutrophil Gelatinase-associated Lipocalin (NGAL) promoter 2023-07-25 2023-10-11 Zhu, N.,Mealka, M.,Mitchel, S.,Milani, C.,Acuna, L.M.,Rogers, E.,Lahana, A.N.,Huxford, T. X-ray Crystallographic Study of Preferred Spacing by the NF-kappa B p50 Homodimer on kappa B DNA. Biomolecules 2023 13 0 0 8DIV 37903281 Crystal structure of NavAb I22V as a basis for the human Nav1.7 Inherited Erythromelalgia I136V mutation 2022-06-29 2023-10-25 Wisedchaisri, G.,Gamal El-Din, T.M.,Powell, N.M.,Zheng, N.,Catterall, W.A. Structural basis for severe pain caused by mutations in the voltage sensors of sodium channel NaV1.7. J.Gen.Physiol. 2023 155 0 0 8DIW 37903281 Crystal structure of NavAb E96P as a basis for the human Nav1.7 Inherited Erythromelalgia S211P mutation 2022-06-29 2023-10-25 Wisedchaisri, G.,Gamal El-Din, T.M.,Powell, N.M.,Zheng, N.,Catterall, W.A. Structural basis for severe pain caused by mutations in the voltage sensors of sodium channel NaV1.7. J.Gen.Physiol. 2023 155 0 0 8DIY 37903281 Crystal structure of NavAb L101S as a basis for the human Nav1.7 Inherited Erythromelalgia F216S mutation 2022-06-29 2023-10-25 Wisedchaisri, G.,Gamal El-Din, T.M.,Powell, N.M.,Zheng, N.,Catterall, W.A. Structural basis for severe pain caused by mutations in the voltage sensors of sodium channel NaV1.7. J.Gen.Physiol. 2023 155 0 0 8CUX 37845322 Accurate computational design of genetically encoded 3D protein crystals 2022-05-17 2023-11-01 Li, Z.,Wang, S.,Nattermann, U.,Bera, A.K.,Borst, A.J.,Yaman, M.Y.,Bick, M.J.,Yang, E.C.,Sheffler, W.,Lee, B.,Seifert, S.,Hura, G.L.,Nguyen, H.,Kang, A.,Dalal, R.,Lubner, J.M.,Hsia, Y.,Haddox, H.,Courbet, A.,Dowling, Q.,Miranda, M.,Favor, A.,Etemadi, A.,Edman, N.I.,Yang, W.,Weidle, C.,Sankaran, B.,Negahdari, B.,Ross, M.B.,Ginger, D.S.,Baker, D. Accurate computational design of three-dimensional protein crystals. Nat Mater 2023 22 1556 1563 8CWS 37845322 Accurate computational design of genetically encoded 3D protein crystals 2022-05-19 2023-11-01 Li, Z.,Wang, S.,Nattermann, U.,Bera, A.K.,Borst, A.J.,Yaman, M.Y.,Bick, M.J.,Yang, E.C.,Sheffler, W.,Lee, B.,Seifert, S.,Hura, G.L.,Nguyen, H.,Kang, A.,Dalal, R.,Lubner, J.M.,Hsia, Y.,Haddox, H.,Courbet, A.,Dowling, Q.,Miranda, M.,Favor, A.,Etemadi, A.,Edman, N.I.,Yang, W.,Weidle, C.,Sankaran, B.,Negahdari, B.,Ross, M.B.,Ginger, D.S.,Baker, D. Accurate computational design of three-dimensional protein crystals. Nat Mater 2023 22 1556 1563 8SWA 37917677 Crystal structure of the human S-adenosylmethionine synthetase 1 in complex with SAM and PPNP 2023-05-18 2023-11-15 Pham, V.N.,Bruemmer, K.J.,Toh, J.D.W.,Ge, E.J.,Tenney, L.,Ward, C.C.,Dingler, F.A.,Millington, C.L.,Garcia-Prieto, C.A.,Pulos-Holmes, M.C.,Ingolia, N.T.,Pontel, L.B.,Esteller, M.,Patel, K.J.,Nomura, D.K.,Chang, C.J. Formaldehyde regulates S -adenosylmethionine biosynthesis and one-carbon metabolism. Science 2023 382 0 0 8TTO 37992756 Structure of Hachiman anti-defense 1 (Had1) 2023-08-14 2023-11-22 Yirmiya, E.,Leavitt, A.,Lu, A.,Ragucci, A.E.,Avraham, C.,Osterman, I.,Garb, J.,Antine, S.P.,Mooney, S.E.,Hobbs, S.J.,Kranzusch, P.J.,Amitai, G.,Sorek, R. Phages overcome bacterial immunity via diverse anti-defence proteins. Nature 2024 625 352 359 7XUZ Crystal structure of a HDAC4-MEF2A-DNA ternary complex 2022-05-20 2023-11-29 Dai, S.Y.,Guo, L.,Dey, R.,Guo, M.,Bates, D.,Cayford, J.,Jiang, L.Y.,Wei, H.D.,Chen, L.,Chen, Y.H. Structural insights into transcription regulation by the higher-order HDAC4-MEF2-DNA complex To Be Published 0 0 0 0 8TJM 38000656 Crystal structure of KPC-44 carbapenemase 2023-07-23 2023-12-06 Sun, Z.,Lin, H.,Hu, L.,Neetu, N.,Sankaran, B.,Wang, J.,Prasad, B.V.V.,Palzkill, T. Klebsiella pneumoniae carbapenemase variant 44 acquires ceftazidime-avibactam resistance by altering the conformation of active-site loops. J.Biol.Chem. 2023 300 105493 105493 8TMR 38000656 Crystal structure of KPC-44 carbapenemase complexed with avibactam 2023-07-30 2023-12-06 Sun, Z.,Lin, H.,Hu, L.,Neetu, N.,Sankaran, B.,Wang, J.,Prasad, B.V.V.,Palzkill, T. Klebsiella pneumoniae carbapenemase variant 44 acquires ceftazidime-avibactam resistance by altering the conformation of active-site loops. J.Biol.Chem. 2023 300 105493 105493 8TN0 38000656 Crystal structure of KPC-44 carbapenemase w/o cryoprotectant 2023-07-31 2023-12-06 Sun, Z.,Lin, H.,Hu, L.,Neetu, N.,Sankaran, B.,Wang, J.,Prasad, B.V.V.,Palzkill, T. Klebsiella pneumoniae carbapenemase variant 44 acquires ceftazidime-avibactam resistance by altering the conformation of active-site loops. J.Biol.Chem. 2023 300 105493 105493 8F48 Human CASQ1 mutant - S248E 2022-11-10 2023-12-13 Mayfield, J.E.,Dixon, J.E. Human CASQ1 mutant - S248E To Be Published 0 0 0 0 8VGZ 38190441 Influenza PA-N Endonuclease E23K Mutant (amino acids 52-74 truncation) 2023-12-30 2024-02-14 Kohlbrand, A.J.,Stokes, R.W.,Sankaran, B.,Cohen, S.M. Structural Studies of Inhibitors with Clinically Relevant Influenza Endonuclease Variants. Biochemistry 2024 63 264 272 8SJ3 Beta-lactamase CTX-M-14 E166Y/N170G 2023-04-17 2024-02-21 Judge, A.,Palkzill, T.,Sankaran, B.,Hu, L.,Prasad, B.V.V. Structure of CTX-M-14 E166Y/N170G at 1.5 Angstroms resolution To Be Published 0 0 0 0 8G9J 38480887 Geometrically programmable nanomaterial construction using regularized protein building blocks 2023-02-21 2024-03-13 Huddy, T.F.,Hsia, Y.,Kibler, R.D.,Xu, J.,Bethel, N.,Nagarajan, D.,Redler, R.,Leung, P.J.Y.,Weidle, C.,Courbet, A.,Yang, E.C.,Bera, A.K.,Coudray, N.,Calise, S.J.,Davila-Hernandez, F.A.,Han, H.L.,Carr, K.D.,Li, Z.,McHugh, R.,Reggiano, G.,Kang, A.,Sankaran, B.,Dickinson, M.S.,Coventry, B.,Brunette, T.J.,Liu, Y.,Dauparas, J.,Borst, A.J.,Ekiert, D.,Kollman, J.M.,Bhabha, G.,Baker, D. Blueprinting extendable nanomaterials with standardized protein blocks. Nature 2024 627 898 904 8GA7 38480887 Geometrically programmable nanomaterial construction using regularized protein building blocks 2023-02-22 2024-03-13 Huddy, T.F.,Hsia, Y.,Kibler, R.D.,Xu, J.,Bethel, N.,Nagarajan, D.,Redler, R.,Leung, P.J.Y.,Weidle, C.,Courbet, A.,Yang, E.C.,Bera, A.K.,Coudray, N.,Calise, S.J.,Davila-Hernandez, F.A.,Han, H.L.,Carr, K.D.,Li, Z.,McHugh, R.,Reggiano, G.,Kang, A.,Sankaran, B.,Dickinson, M.S.,Coventry, B.,Brunette, T.J.,Liu, Y.,Dauparas, J.,Borst, A.J.,Ekiert, D.,Kollman, J.M.,Bhabha, G.,Baker, D. Blueprinting extendable nanomaterials with standardized protein blocks. Nature 2024 627 898 904 8T4V 38443470 Crystal structure of compound 1 bound to K-Ras(G12D) 2023-06-10 2024-03-13 Zheng, Q.,Zhang, Z.,Guiley, K.Z.,Shokat, K.M. Strain-release alkylation of Asp12 enables mutant selective targeting of K-Ras-G12D. Nat.Chem.Biol. 2024 0 0 0 8T6C 38502697 Crystal structure of T33-18.2: Deep-learning sequence design of co-assembling tetrahedron protein nanoparticles 2023-06-15 2024-04-24 de Haas, R.J.,Brunette, N.,Goodson, A.,Dauparas, J.,Yi, S.Y.,Yang, E.C.,Dowling, Q.,Nguyen, H.,Kang, A.,Bera, A.K.,Sankaran, B.,de Vries, R.,Baker, D.,King, N.P. Rapid and automated design of two-component protein nanomaterials using ProteinMPNN. Proc.Natl.Acad.Sci.USA 2024 121 0 0 8T6N 38502697 Crystal structure of T33-27.1: Deep-learning sequence design of co-assembling tetrahedron protein nanoparticles 2023-06-16 2024-04-24 de Haas, R.J.,Brunette, N.,Goodson, A.,Dauparas, J.,Yi, S.Y.,Yang, E.C.,Dowling, Q.,Nguyen, H.,Kang, A.,Bera, A.K.,Sankaran, B.,de Vries, R.,Baker, D.,King, N.P. Rapid and automated design of two-component protein nanomaterials using ProteinMPNN. Proc.Natl.Acad.Sci.USA 2024 121 0 0