PDB_ID PUBMED_CID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS CITATION TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 1TQL 15306852 POLIOVIRUS POLYMERASE G1A MUTANT 2004-06-17 2004-08-17 Thompson, A.A.,Peersen, O.B. Structural basis for proteolysis-dependent activation of the poliovirus RNA-dependent RNA polymerase Embo J. 2004 23 3462 3471 1XAU 18178834 STRUCTURE OF THE BTLA ECTODOMAIN 2004-08-26 2004-10-05 Nelson, C.A.,Fremont, M.D.,Sedy, J.R.,Norris, P.S.,Ware, C.F.,Murphy, K.M.,Fremont, D.H. Structural determinants of herpesvirus entry mediator recognition by murine B and T lymphocyte attenuator. J.Immunol. 2008 180 940 947 2A3U 16055923 Crystal structure of sulbactam bound to E166A variant of SHV-1 beta-lactamase 2005-06-27 2005-08-02 Padayatti, P.S.,Helfand, M.S.,Totir, M.A.,Carey, M.P.,Carey, P.R.,Bonomo, R.A.,van den Akker, F. High Resolution Crystal Structures of the trans-Enamine Intermediates Formed by Sulbactam and Clavulanic Acid and E166A SHV-1 {beta}-Lactamase. 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Structure of peptide sex pheromone receptor PrgX and PrgX/pheromone complexes and regulation of conjugation in Enterococcus faecalis. Proc.Natl.Acad.Sci.Usa 2005 102 18596 18601 2FNP 16455801 Crystal structure of SarA 2006-01-11 2006-01-31 Liu, Y.,Manna, A.C.,Pan, C.H.,Kriksunov, I.A.,Thiel, D.J.,Cheung, A.L.,Zhang, G. Structural and function analyses of the global regulatory protein SarA from Staphylococcus aureus. Proc.Natl.Acad.Sci.Usa 2006 103 2392 2397 2F5C 16533030 Bacillus subtilis Manganese transport regulator (MNTR) bound to manganese, hexagonal crystal form 2005-11-25 2006-03-07 Kliegman, J.I.,Griner, S.L.,Helmann, J.D.,Brennan, R.G.,Glasfeld, A. Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis. Biochemistry 2006 45 3493 3505 2FCT 16541079 SyrB2 with Fe(II), chloride, and alpha-ketoglutarate 2005-12-12 2006-03-21 Blasiak, L.C.,Vaillancourt, F.H.,Walsh, C.T.,Drennan, C.L. Crystal structure of the non-haem iron halogenase SyrB2 in syringomycin biosynthesis. Nature 2006 440 368 371 2FKM 16595672 PMM/PGM S108D mutant with alpha-d-glucose 1,6-bisphosphate bound 2006-01-04 2006-04-04 Regni, C.,Schramm, A.M.,Beamer, L.J. The reaction of phosphohexomutase from Pseudomonas aeruginosa: structural insights into a simple processive enzyme. J.Biol.Chem. 2006 281 15564 15571 2F42 16605243 dimerization and U-box domains of Zebrafish C-terminal of HSP70 interacting protein 2005-11-22 2006-05-02 Xu, Z.,Devlin, K.I.,Ford, M.G.,Nix, J.C.,Qin, J.,Misra, S. Structure and Interactions of the Helical and U-Box Domains of CHIP, the C Terminus of HSP70 Interacting Protein. Biochemistry 2006 45 4749 4759 2GQ1 16670087 Crystal Structure of Recombinant Type I Fructose-1,6-bisphosphatase from Escherichia coli Complexed with Sulfate Ions 2006-04-19 2006-05-02 Hines, J.K.,Fromm, H.J.,Honzatko, R.B. Novel Allosteric Activation Site in Escherichia coli Fructose-1,6-bisphosphatase. J.Biol.Chem. 2006 281 18386 18393 2GBJ 16647719 Crystal Structure of the 9-10 8 Glycine Insertion Mutant of Ubiquitin. 2006-03-10 2006-05-16 Ferraro, D.M.,Ferraro, D.J.,Ramaswamy, S.,Robertson, A.D. Structures of Ubiquitin Insertion Mutants Support Site-specific Reflex Response to Insertions Hypothesis. J.Mol.Biol. 2006 359 390 402 2GQR 16687397 SAICAR Synthetase Complexed with ADP-Mg2+ 2006-04-21 2006-05-16 Ginder, N.D.,Binkowski, D.J.,Fromm, H.J.,Honzatko, R.B. Nucleotide Complexes of Escherichia coli Phosphoribosylaminoimidazole Succinocarboxamide Synthetase. J.Biol.Chem. 2006 281 20680 20688 2G5B 16946732 Crystal Structure of the anti-Bax monoclonal antibody 6A7 and a Bax peptide. 2006-02-22 2006-07-25 Peyerl, F.W.,Dai, S.,Murphy, G.A.,Crawford, F.,White, J.,Marrack, P.,Kappler, J.W. Elucidation of some Bax conformational changes through crystallization of an antibody-peptide complex. Cell Death Differ. 2007 14 447 452 2AY0 17001030 Structure of the Lys9Met mutant of the E. coli Proline Utilization A (PutA) DNA-binding domain. 2005-09-06 2006-08-15 Larson, J.D.,Jenkins, J.L.,Schuermann, J.P.,Zhou, Y.,Becker, D.F.,Tanner, J.J. Crystal structures of the DNA-binding domain of Escherichia coli proline utilization A flavoprotein and analysis of the role of Lys9 in DNA recognition. Protein Sci. 2006 15 2630 2641 2FLU 16888629 Crystal Structure of the Kelch-Neh2 Complex 2006-01-06 2006-08-15 Lo, S.C.,Li, X.,Henzl, M.T.,Beamer, L.J.,Hannink, M. Structure of the Keap1:Nrf2 interface provides mechanistic insight into Nrf2 signaling. Embo J. 2006 25 3605 3617 2H12 17087502 Structure of Acetobacter aceti citrate synthase complexed with oxaloacetate and carboxymethyldethia coenzyme A (CMX) 2006-05-15 2006-09-26 Francois, J.A.,Starks, C.M.,Sivanuntakorn, S.,Jiang, H.,Ransome, A.E.,Nam, J.W.,Constantine, C.Z.,Kappock, T.J. Structure of a NADH-insensitive hexameric citrate synthase that resists acid inactivation. Biochemistry 2006 45 13487 13499 2HMJ 16980501 Crystal Structure of the Naphthalene 1,2-Dioxygenase Phe-352-Val Mutant. 2006-07-11 2006-10-10 Ferraro, D.J.,Okerlund, A.L.,Mowers, J.C.,Ramaswamy, S. Structural basis for regioselectivity and stereoselectivity of product formation by naphthalene 1,2-dioxygenase. J.Bacteriol. 2006 188 6986 6994 2HML 16980501 Crystal Structure of the Naphthalene 1,2-Dioxygenase F352V Mutant Bound to Phenanthrene. 2006-07-11 2006-10-10 Ferraro, D.J.,Okerlund, A.L.,Mowers, J.C.,Ramaswamy, S. Structural basis for regioselectivity and stereoselectivity of product formation by naphthalene 1,2-dioxygenase. J.Bacteriol. 2006 188 6986 6994 2HMM 16980501 Crystal Structure of Naphthalene 1,2-Dioxygenase Bound to Anthracene 2006-07-11 2006-10-10 Ferraro, D.J.,Okerlund, A.L.,Mowers, J.C.,Ramaswamy, S. Structural basis for regioselectivity and stereoselectivity of product formation by naphthalene 1,2-dioxygenase. J.Bacteriol. 2006 188 6986 6994 2HMN 16980501 Crystal Structure of the Naphthalene 1,2-Dioxygenase F352V Mutant Bound to Anthracene. 2006-07-11 2006-10-10 Ferraro, D.J.,Okerlund, A.L.,Mowers, J.C.,Ramaswamy, S. Structural basis for regioselectivity and stereoselectivity of product formation by naphthalene 1,2-dioxygenase. J.Bacteriol. 2006 188 6986 6994 2HMO 16980501 Crystal Structure of Naphthalene 1,2-Dioxygenase Bound to 3-Nitrotoluene. 2006-07-11 2006-10-10 Ferraro, D.J.,Okerlund, A.L.,Mowers, J.C.,Ramaswamy, S. Structural basis for regioselectivity and stereoselectivity of product formation by naphthalene 1,2-dioxygenase. J.Bacteriol. 2006 188 6986 6994 2HUE 17081973 Structure of the H3-H4 chaperone Asf1 bound to histones H3 and H4 2006-07-26 2006-11-21 English, C.M.,Adkins, M.W.,Carson, J.J.,Churchill, M.E.,Tyler, J.K. Structural basis for the histone chaperone activity of asf1. Cell(Cambridge,Mass.) 2006 127 495 508 2IM0 17223130 Crystal structure of poliovirus polymerase complexed with CTP and Mg2+ 2006-10-03 2006-12-12 Thompson, A.A.,Albertini, R.A.,Peersen, O.B. Stabilization of Poliovirus Polymerase by NTP Binding and Fingers-Thumb Interactions. J.Mol.Biol. 2007 366 1459 1474 2NP8 17157005 Structural Basis for the Inhibition of Aurora A Kinase by a Novel Class of High Affinity Disubstituted Pyrimidine Inhibitors 2006-10-26 2006-12-26 Tari, L.W.,Hoffman, I.D.,Bensen, D.C.,Hunter, M.J.,Nix, J.,Nelson, K.J.,McRee, D.E.,Swanson, R.V. Structural basis for the inhibition of Aurora A kinase by a novel class of high affinity disubstituted pyrimidine inhibitors. Bioorg.Med.Chem.Lett. 2007 17 688 691 2I4A 17192591 Crystal structure of thioredoxin from the acidophile Acetobacter aceti 2006-08-21 2007-01-09 Starks, C.M.,Francois, J.A.,Macarthur, K.M.,Heard, B.Z.,Kappock, T.J. Atomic-resolution crystal structure of thioredoxin from the acidophilic bacterium Acetobacter aceti. Protein Sci. 2007 16 92 98 2H0T 17002290 Crystal structure of the M69V E166A double mutant of SHV-1 b-lactamase complexed to clavulanic acid 2006-05-15 2007-01-30 Totir, M.A.,Padayatti, P.S.,Helfand, M.S.,Carey, M.P.,Bonomo, R.A.,Carey, P.R.,van den Akker, F. Effect of the inhibitor-resistant M69V substitution on the structures and populations of trans-enamine beta-lactamase intermediates. Biochemistry 2006 45 11895 11904 2H0Y 17002290 Crystal structure of the M69V E166A double mutant of SHV-1 b-lactamase complexed to sulbactam 2006-05-15 2007-01-30 Totir, M.A.,Padayatti, P.S.,Helfand, M.S.,Carey, M.P.,Bonomo, R.A.,Carey, P.R.,van den Akker, F. Effect of the inhibitor-resistant M69V substitution on the structures and populations of trans-enamine beta-lactamase intermediates. Biochemistry 2006 45 11895 11904 2H10 17002290 Crystal structure of the M69V E166A double mutant of SHV-1 b-lactamase complexed to tazobactam 2006-05-15 2007-01-30 Totir, M.A.,Padayatti, P.S.,Helfand, M.S.,Carey, M.P.,Bonomo, R.A.,Carey, P.R.,van den Akker, F. Effect of the inhibitor-resistant M69V substitution on the structures and populations of trans-enamine beta-lactamase intermediates. Biochemistry 2006 45 11895 11904 2GPE 17001030 Structure of the DNA-binding domain of E. Coli Proline Utilization A (PUTA) 2006-04-17 2007-02-20 Larson, J.D.,Jenkins, J.L.,Schuermann, J.P.,Zhou, Y.,Becker, D.F.,Tanner, J.J. Crystal structures of the DNA-binding domain of Escherichia coli proline utilization A flavoprotein and analysis of the role of Lys9 in DNA recognition. Protein Sci. 2006 15 2630 2641 2IKF 17189640 Terminal uridylyl transferase 4 from Trypanosoma brucei with bound UTP 2006-10-02 2007-02-20 Stagno, J.,Aphasizheva, I.,Rosengarth, A.,Luecke, H.,Aphasizhev, R. UTP-bound and Apo Structures of a Minimal RNA Uridylyltransferase. J.Mol.Biol. 2007 366 882 899 2G37 17344208 Structure of Thermus thermophilus L-proline dehydrogenase 2006-02-17 2007-02-27 White, T.A.,Krishnan, N.,Becker, D.F.,Tanner, J.J. Structure and Kinetics of Monofunctional Proline Dehydrogenase from Thermus thermophilus. J.Biol.Chem. 2007 282 14316 14327 2ONM 17327228 Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, ALDH2*2, complexed with NAD+ 2007-01-24 2007-03-06 Larson, H.N.,Zhou, J.,Chen, Z.,Stamler, J.S.,Weiner, H.,Hurley, T.D. Structural and functional consequences of coenzyme binding to the inactive asian variant of mitochondrial aldehyde dehydrogenase: roles of residues 475 and 487. J.Biol.Chem. 2007 282 12940 12950 2II8 17289074 Anabaena sensory rhodopsin transducer 2006-09-27 2007-03-20 Vogeley, L.,Trivedi, V.D.,Sineshchekov, O.A.,Spudich, E.N.,Spudich, J.L.,Luecke, H. Crystal structure of the anabaena sensory rhodopsin transducer. J.Mol.Biol. 2007 367 741 751 2IIA 17289074 Anabaena sensory rhodopsin transducer 2006-09-27 2007-03-20 Vogeley, L.,Trivedi, V.D.,Sineshchekov, O.A.,Spudich, E.N.,Spudich, J.L.,Luecke, H. Crystal structure of the anabaena sensory rhodopsin transducer. J.Mol.Biol. 2007 367 741 751 2IG9 17446402 Structure of a full-length Homoprotocatechuate 2,3-Dioxygenase from B. fuscum in a new spacegroup. 2006-09-22 2007-04-24 Kovaleva, E.G.,Lipscomb, J.D. Crystal structures of Fe2+ dioxygenase superoxo, alkylperoxo, and bound product intermediates Science 2007 316 453 457 2IGA 17446402 Structure of Homoprotocatechuate 2,3-Dioxygenase from B. fuscum in complex with reactive intermediates formed via in crystallo reaction with 4-nitrocatechol at low oxygen concentrations. 2006-09-22 2007-04-24 Kovaleva, E.G.,Lipscomb, J.D. Crystal structures of Fe2+ dioxygenase superoxo, alkylperoxo, and bound product intermediates Science 2007 316 453 457 2GTE 18585358 Drosophila OBP LUSH bound to attractant pheromone 11-cis-vaccenyl acetate 2006-04-27 2007-06-12 Laughlin, J.D.,Ha, T.S.,Jones, D.N.,Smith, D.P. Activation of pheromone-sensitive neurons is mediated by conformational activation of pheromone-binding protein Cell(Cambridge,Mass.) 2008 133 1255 1265 2Q8M 17567577 T-like Fructose-1,6-bisphosphatase from Escherichia coli with AMP, Glucose 6-phosphate, and Fructose 1,6-bisphosphate bound 2007-06-11 2007-06-19 Hines, J.K.,Kruesel, C.E.,Fromm, H.J.,Honzatko, R.B. Structure of Inhibited Fructose-1,6-bisphosphatase from Escherichia coli: DISTINCT ALLOSTERIC INHIBITION SITES FOR AMP AND GLUCOSE 6-PHOSPHATE AND THE CHARACTERIZATION OF A GLUCONEOGENIC SWITCH. J.Biol.Chem. 2007 282 24697 24706 2I33 The structure of the Class C acid phosphatase from Bacillus anthracis 2006-08-17 2007-07-31 Felts, R.L.,Tanner, J.J. The crystal structure of the Class C acid phosphatase from Bacillus anthracis To be Published 0 0 0 0 2I34 The crystal structure of Class C acid phosphatase from Bacillus anthracis with tungstate bound 2006-08-17 2007-07-31 Felts, R.L.,Tanner, J.J. The crystal structure of the class C acid phosphatase from Bacillus anthracis To be Published 0 0 0 0 2Q0O 17921255 Crystal structure of an anti-activation complex in bacterial quorum sensing 2007-05-22 2007-09-25 Chen, G.,Jeffrey, P.D.,Fuqua, C.,Shi, Y.,Chen, L. Structural basis for antiactivation in bacterial quorum sensing. Proc.Natl.Acad.Sci.Usa 2007 104 16474 16479 2IFC The Structure of the Binary Complex of Oxalateacetate with Citrate Synthase from the Thermophilic Archaeon Thermolasma acidophilum 2006-09-20 2007-10-02 Lehmann, C.,Kurz, C.,Ellenberger, E. To be anounced To be Published 0 0 0 0 2PV3 17825319 Crystallographic Structure of SurA fragment lacking the second peptidyl-prolyl isomerase domain complexed with peptide NFTLKFWDIFRK 2007-05-09 2007-10-02 Xu, X.,Wang, S.,Hu, Y.X.,McKay, D.B. The Periplasmic Bacterial Molecular Chaperone SurA Adapts its Structure to Bind Peptides in Different Conformations to Assert a Sequence Preference for Aromatic Residues. J.Mol.Biol. 2007 373 367 381 2QVU 17933867 Porcine Liver Fructose-1,6-bisphosphatase cocrystallized with Fru-2,6-P2 and Mg2+, I(T)-state 2007-08-08 2007-10-23 Hines, J.K.,Chen, X.,Nix, J.C.,Fromm, H.J.,Honzatko, R.B. Structures of mammalian and bacterial fructose-1,6-bisphosphatase reveal the basis for synergism in AMP/fructose 2,6-bisphosphate inhibition J.Biol.Chem. 2007 282 36121 36131 2QVV 17933867 Porcine Liver Fructose-1,6-bisphosphatase cocrystallized with Fru-2,6-P2 and Zn2+, I(T)-state 2007-08-08 2007-10-23 Hines, J.K.,Chen, X.,Nix, J.C.,Fromm, H.J.,Honzatko, R.B. Structures of mammalian and bacterial fructose-1,6-bisphosphatase reveal the basis for synergism in AMP/fructose 2,6-bisphosphate inhibition J.Biol.Chem. 2007 282 36121 36131 2NO2 17257618 Crystal structure of the DLLRKN-containing coiled-coil domain of Huntingtin-interacting protein 1 2006-10-24 2007-10-30 Ybe, J.A.,Mishra, S.,Helms, S.,Nix, J. Crystal structure at 2.8 A of the DLLRKN-containing coiled-coil domain of huntingtin-interacting protein 1 (HIP1) reveals a surface suitable for clathrin light chain binding J.Mol.Biol. 2007 367 8 15 2P08 18006497 Structure of the N-terminally truncated PAS domain of signal transduction histidine kinase from Nostoc punctiforme PCC 73102 with homology to the H-NOXA/H-NOBA domain of the soluble guanylyl cyclase 2007-02-28 2007-11-13 Ma, X.,Sayed, N.,Baskaran, P.,Beuve, A.,van den Akker, F. PAS-mediated dimerization of soluble guanylyl cyclase revealed by signal transduction histidine kinase domain crystal structure. J.Biol.Chem. 2008 283 1167 1178 2O3C 18579163 Crystal structure of zebrafish Ape 2006-12-01 2007-12-11 Georgiadis, M.M.,Luo, M.,Gaur, R.K.,Delaplane, S.,Li, X.,Kelley, M.R. Evolution of the redox function in mammalian apurinic/apyrimidinic endonuclease Mutat.Res. 2008 643 54 63 3B7A 18234222 Complex of S52A Substituted Droposphila LUSH protein with Ethanol 2007-10-30 2008-02-05 Thode, A.B.,Kruse, S.W.,Nix, J.C.,Jones, D.N. The role of multiple hydrogen-bonding groups in specific alcohol binding sites in proteins: insights from structural studies of LUSH. J.Mol.Biol. 2008 376 1360 1376 3B86 18234222 Crystal structure of T57S substituted LUSH protein complexed with ethanol 2007-10-31 2008-02-05 Thode, A.B.,Kruse, S.W.,Nix, J.C.,Jones, D.N. The role of multiple hydrogen-bonding groups in specific alcohol binding sites in proteins: insights from structural studies of LUSH. J.Mol.Biol. 2008 376 1360 1376 3B87 18234222 Complex of T57A Substituted Droposphila LUSH protein with Butanol 2007-10-31 2008-02-05 Thode, A.B.,Kruse, S.W.,Nix, J.C.,Jones, D.N. The role of multiple hydrogen-bonding groups in specific alcohol binding sites in proteins: insights from structural studies of LUSH. J.Mol.Biol. 2008 376 1360 1376 3B88 18234222 Complex of T57A Substituted Drosophila LUSH Protein with Ethanol 2007-10-31 2008-02-05 Thode, A.B.,Kruse, S.W.,Nix, J.C.,Jones, D.N. The role of multiple hydrogen-bonding groups in specific alcohol binding sites in proteins: insights from structural studies of LUSH. J.Mol.Biol. 2008 376 1360 1376 3BBE 18208838 M. jannaschii Nep1 2007-11-09 2008-02-05 Taylor, A.B.,Meyer, B.,Leal, B.Z.,Kotter, P.,Schirf, V.,Demeler, B.,Hart, P.J.,Entian, K.D.,Wohnert, J. The crystal structure of Nep1 reveals an extended SPOUT-class methyltransferase fold and a pre-organized SAM-binding site. Nucleic Acids Res. 2008 36 1542 1554 3BBH 18208838 M. jannaschii Nep1 complexed with Sinefungin 2007-11-09 2008-02-05 Taylor, A.B.,Meyer, B.,Leal, B.Z.,Kotter, P.,Schirf, V.,Demeler, B.,Hart, P.J.,Entian, K.D.,Wohnert, J. The crystal structure of Nep1 reveals an extended SPOUT-class methyltransferase fold and a pre-organized SAM-binding site. Nucleic Acids Res. 2008 36 1542 1554 2OXQ 18485199 Structure of the UbcH5 :CHIP U-box complex 2007-02-20 2008-02-19 Xu, Z.,Kohli, E.,Devlin, K.I.,Bold, M.,Nix, J.C.,Misra, S. Interactions between the quality control ubiquitin ligase CHIP and ubiquitin conjugating enzymes. Bmc Struct.Biol. 2008 8 26 26 3CLE HIV neutralizing monoclonal antibody YZ23 2008-03-18 2008-03-25 Nishiama, Y.,Planque, S.,Mitsuda, Y.,Taguchi, H.,Jin, L.,Symersky, J.,Boivin, S.,Salas, M.,Hanson, C.,Paul, S. HIV neutralizing monoclonal antibody YZ23 To be Published 0 0 0 0 2EKG 18426222 Structure of Thermus thermophilus Proline Dehydrogenase inactivated by N-propargylglycine 2007-03-23 2008-04-01 White, T.A.,Johnson, W.H.,Whitman, C.P.,Tanner, J.J. Structural basis for the inactivation of Thermus thermophilus proline dehydrogenase by N-propargylglycine Biochemistry 2008 47 5573 5580 2G0E Structure of QacR Multidrug Transcriptional Regulator Bound to Trivalent and Bivalent Diamidine Drugs 2006-02-12 2008-04-08 Schuman, J.T.,Hardie, K.M.,Brown, M.H.,Skurray, R.A.,Brennan, R.G. Structure of QacR Multidrug Transcriptional Regulator Bound to Trivalent and Bivalent Diamidine Drugs To be Published 0 0 0 0 2GBY Structure of QacR Multidrug Transcriptional Regulator Bound to Bivalent Diamidine Berenil 2006-03-12 2008-04-08 Brennan, R.G.,Schuman, J.T. Structure of QacR Multidrug Transcriptional Regulator Bound to Trivalent and Bivalent Diamidine Drugs To be Published 0 0 0 0 2PNX 19187765 The PHD finger of ING4 in complex with an H3K4Me3 histone peptide 2007-04-25 2008-04-15 Hung, T.,Binda, O.,Champagne, K.S.,Kuo, A.J.,Johnson, K.,Chang, H.Y.,Simon, M.D.,Kutateladze, T.G.,Gozani, O. ING4 mediates crosstalk between histone H3 K4 trimethylation and H3 acetylation to attenuate cellular transformation Mol.Cell 2009 33 248 256 2ZEG 18072935 Crystal structure of the human glutaminyl cyclase mutant E201L at 2.08 angstrom resolution 2007-12-12 2008-04-22 Huang, K.F.,Wang, Y.R.,Chang, E.C.,Chou, T.L.,Wang, A.H. A conserved hydrogen-bond network in the catalytic centre of animal glutaminyl cyclases is critical for catalysis. Biochem.J. 2008 411 181 190 2ZEL 18072935 Crystal structure of the human glutaminyl cyclase mutant D248A at 1.97 angstrom resolution 2007-12-13 2008-04-22 Huang, K.F.,Wang, Y.R.,Chang, E.C.,Chou, T.L.,Wang, A.H. A conserved hydrogen-bond network in the catalytic centre of animal glutaminyl cyclases is critical for catalysis. Biochem.J. 2008 411 181 190 2ZEM 18072935 Crystal structure of the human glutaminyl cyclase mutant D248Q at 2.18 angstrom resolution 2007-12-13 2008-04-22 Huang, K.F.,Wang, Y.R.,Chang, E.C.,Chou, T.L.,Wang, A.H. A conserved hydrogen-bond network in the catalytic centre of animal glutaminyl cyclases is critical for catalysis. Biochem.J. 2008 411 181 190 2R5I 17804402 Pentamer Structure of Major Capsid Protein L1 of Human Papilloma Virus type 18 2007-09-03 2008-05-06 Bishop, B.,Dasgupta, J.,Klein, M.,Garcea, R.L.,Christensen, N.D.,Zhao, R.,Chen, X.S. Crystal structures of four types of human papillomavirus L1 capsid proteins: understanding the specificity of neutralizing monoclonal antibodies. J.Biol.Chem. 2007 282 31803 31811 2R5J 17804402 Pentamer Structure of Major Capsid protein L1 of Human Papilloma Virus Type 35 2007-09-03 2008-05-06 Bishop, B.,Dasgupta, J.,Klein, M.,Garcea, R.L.,Christensen, N.D.,Zhao, R.,Chen, X.S. Crystal structures of four types of human papillomavirus L1 capsid proteins: understanding the specificity of neutralizing monoclonal antibodies. J.Biol.Chem. 2007 282 31803 31811 2R5K 17804402 Pentamer Structure of Major Capsid protein L1 of Human Papilloma Virus type 11 2007-09-03 2008-05-06 Bishop, B.,Dasgupta, J.,Klein, M.,Garcea, R.L.,Christensen, N.D.,Zhao, R.,Chen, X.S. Crystal structures of four types of human papillomavirus L1 capsid proteins: understanding the specificity of neutralizing monoclonal antibodies. J.Biol.Chem. 2007 282 31803 31811 2QIC 18533182 Crystal Structure of the ING1 PHD Finger in complex with a Histone H3K4ME3 peptide 2007-07-03 2008-05-13 Pena, P.V.,Hom, R.A.,Hung, T.,Lin, H.,Kuo, A.J.,Wong, R.P.,Subach, O.M.,Champagne, K.S.,Zhao, R.,Verkhusha, V.V.,Li, G.,Gozani, O.,Kutateladze, T.G. Histone H3K4me3 binding is required for the DNA repair and apoptotic activities of ING1 tumor suppressor. J.Mol.Biol. 2008 380 303 312 3CGY 18440021 Crystal Structure of Salmonella Sensor Kinase PhoQ catalytic domain in complex with radicicol 2008-03-06 2008-05-13 Guarnieri, M.T.,Zhang, L.,Shen, J.,Zhao, R. The Hsp90 inhibitor radicicol interacts with the ATP-binding pocket of bacterial sensor kinase PhoQ. J.Mol.Biol. 2008 379 82 93 3CGZ 18440021 Crystal Structure of Salmonella Sensor Kinase PhoQ catalytic domain 2008-03-06 2008-05-13 Guarnieri, M.T.,Zhang, L.,Shen, J.,Zhao, R. The Hsp90 inhibitor radicicol interacts with the ATP-binding pocket of bacterial sensor kinase PhoQ. J.Mol.Biol. 2008 379 82 93 3BXQ 18492668 The structure of a mutant insulin uncouples receptor binding from protein allostery. An electrostatic block to the TR transition 2008-01-14 2008-05-20 Wan, Z.L.,Huang, K.,Hu, S.Q.,Whittaker, J.,Weiss, M.A. The structure of a mutant insulin uncouples receptor binding from protein allostery. An electrostatic block to the TR transition. J.Biol.Chem. 2008 283 21198 21210 3C7N 18550409 Structure of the Hsp110:Hsc70 Nucleotide Exchange Complex 2008-02-07 2008-05-27 Schuermann, J.P.,Jiang, J.,Cuellar, J.,Llorca, O.,Wang, L.,Gimenez, L.E.,Jin, S.,Taylor, A.B.,Demeler, B.,Morano, K.A.,Hart, P.J.,Valpuesta, J.M.,Lafer, E.M.,Sousa, R. Structure of the Hsp110:Hsc70 nucleotide exchange machine Mol.Cell 2008 31 232 243 2QDI 18585358 Drosophila OBP LUSH D118A mutation 2007-06-20 2008-06-03 Laughlin, J.D.,Ha, T.S.,Jones, D.N.,Smith, D.P. Activation of pheromone-sensitive neurons is mediated by conformational activation of pheromone-binding protein. Cell(Cambridge,Mass.) 2008 133 1255 1265 3C6W 18623064 Crystal structure of the ING5 PHD finger in complex with H3K4me3 peptide 2008-02-05 2008-06-03 Champagne, K.S.,Saksouk, N.,Pena, P.V.,Johnson, K.,Ullah, M.,Yang, X.J.,Cote, J.,Kutateladze, T.G. The crystal structure of the ING5 PHD finger in complex with an H3K4me3 histone peptide. Proteins 2008 72 1371 1376 2QA7 18155047 Crystal structure of Huntingtin-interacting protein 1 (HIP1) coiled-coil domain with a basic surface suitable for HIP-protein interactor (HIPPI) 2007-06-14 2008-07-08 Ybe, J.A.,Niu, Q. Crystal structure at 2.8 A of Huntingtin-interacting protein 1 (HIP1) coiled-coil domain reveals a charged surface suitable for HIP1 protein interactor (HIPPI) J.Mol.Biol. 2007 375 1197 1205 2RBF 18586269 Structure of the ribbon-helix-helix domain of Escherichia coli PutA (PutA52) complexed with operator DNA (O2) 2007-09-18 2008-07-29 Zhou, Y.,Larson, J.D.,Bottoms, C.A.,Arturo, E.C.,Henzl, M.T.,Jenkins, J.L.,Nix, J.C.,Becker, D.F.,Tanner, J.J. Structural basis of the transcriptional regulation of the proline utilization regulon by multifunctional PutA. J.Mol.Biol. 2008 381 174 188 3CMO HIV neutralizing monoclonal antibody YZ18 2008-03-24 2008-08-05 Jin, L.,Prasad, V.,Paul, S. HIV neutralizing monoclonal antibody YZ18 TO BE PUBLISHED 0 0 0 0 2R26 The Structure of the Ternary Complex of Carboxymethyl Coenzyme A and Oxalateacetate with Citrate Synthase from the Thermophilic Archaeonthermoplasma Acidophilum 2007-08-24 2008-08-12 Lehmann, C.,Ellenberger, T.E.,Kurz, L.C. The Structure of the Ternary Complex of Carboxymethyl Coenzyme A and Oxalateacetate with Citrate Synthase from the Thermophilic Archaeonthermoplasma Acidophilum To be Published 2007 0 0 0 2ZD7 19172749 The structure of VPS75 (Vacuolar protein sorting-associated protein 75) 2007-11-20 2008-08-12 Park, Y.J.,Sudhoff, K.B.,Andrews, A.J.,Stargell, L.A.,Luger, K. Histone chaperone specificity in Rtt109 activation. Nat.Struct.Mol.Biol. 2008 15 957 964 3BT9 18616285 crystal structure of QacR(E57Q) bound to Dequalinium 2007-12-28 2008-08-12 Peters, K.M.,Schuman, J.T.,Skurray, R.A.,Brown, M.H.,Brennan, R.G.,Schumacher, M.A. QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization Biochemistry 2008 47 8122 8129 3BTC 18616285 crystal structure of QacR(E57Q) bound to malachite green 2007-12-28 2008-08-12 Peters, K.M.,Schuman, J.T.,Skurray, R.A.,Brown, M.H.,Brennan, R.G.,Schumacher, M.A. QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization Biochemistry 2008 47 8122 8129 3BTI 18616285 crystal structure of QacR(E58Q) bound to berberine 2007-12-28 2008-08-12 Peters, K.M.,Schuman, J.T.,Skurray, R.A.,Brown, M.H.,Brennan, R.G.,Schumacher, M.A. QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization Biochemistry 2008 47 8122 8129 3BTJ 18616285 crystal structure of QacR(E58Q) bound to dequalinium 2007-12-28 2008-08-12 Peters, K.M.,Schuman, J.T.,Skurray, R.A.,Brown, M.H.,Brennan, R.G.,Schumacher, M.A. QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization Biochemistry 2008 47 8122 8129 3BTL 18616285 crystal structure of QacR(E58Q) bound to malachite green 2007-12-28 2008-08-12 Peters, K.M.,Schuman, J.T.,Skurray, R.A.,Brown, M.H.,Brennan, R.G.,Schumacher, M.A. QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization Biochemistry 2008 47 8122 8129 3BKQ 18690721 Structure of the P368G mutant of PMM/PGM in complex with its substrate 2007-12-07 2008-09-09 Schramm, A.M.,Mehra-Chaudhary, R.,Furdui, C.M.,Beamer, L.J. Backbone flexibility, conformational change, and catalysis in a phosphohexomutase from Pseudomonas aeruginosa. Biochemistry 2008 47 9154 9162 3DDK 18632862 Coxsackievirus B3 3Dpol RNA Dependent RNA Polymerase 2008-06-05 2008-09-23 Campagnola, G.,Weygandt, M.H.,Scoggin, K.E.,Peersen, O.B. Crystal Structure of Coxsackievirus B3 3Dpol Highlights Functional Importance of Residue 5 in Picornaviral Polymerases J.Virol. 2008 82 9458 9464 3DWJ 18815130 Heme-proximal W188H mutant of inducible nitric oxide synthase 2008-07-22 2008-09-30 Tejero, J.,Biswas, A.,Wang, Z.Q.,Page, R.C.,Haque, M.M.,Hemann, C.,Zweier, J.L.,Misra, S.,Stuehr, D.J. Stabilization and Characterization of a Heme-Oxy Reaction Intermediate in Inducible Nitric-oxide Synthase J.Biol.Chem. 2008 283 33498 33507 3C1B 18794842 The effect of H3 K79 dimethylation and H4 K20 trimethylation on nucleosome and chromatin structure 2008-01-22 2008-10-07 Lu, X.,Simon, M.D.,Chodaparambil, J.V.,Hansen, J.C.,Shokat, K.M.,Luger, K. The effect of H3K79 dimethylation and H4K20 trimethylation on nucleosome and chromatin structure. Nat.Struct.Mol.Biol. 2008 15 1122 1124 3C1C 18794842 The effect of H3 K79 dimethylation and H4 K20 trimethylation on nucleosome and chromatin structure 2008-01-22 2008-10-07 Lu, X.,Simon, M.D.,Chodaparambil, J.V.,Hansen, J.C.,Shokat, K.M.,Luger, K. The effect of H3K79 dimethylation and H4K20 trimethylation on nucleosome and chromatin structure. Nat.Struct.Mol.Biol. 2008 15 1122 1124 3ET4 17824671 Structure of Recombinant Haemophilus Influenzae E(P4) Acid Phosphatase 2008-10-06 2008-10-14 Felts, R.L.,Ou, Z.,Reilly, T.J.,Tanner, J.J. Structure of Recombinant Haemophilus Influenzae E (P4) Acid Phosphatase Reveals a New Member of the Haloacid Dehalogenase Superfamily. Biochemistry 2007 46 11110 0 3ET5 17824671 Structure of Recombinant Haemophilus Influenzae E(P4) Acid Phosphatase Complexed with tungstate 2008-10-06 2008-10-14 Felts, R.L.,Ou, Z.,Reilly, T.J.,Tanner, J.J. Structure of Recombinant Haemophilus Influenzae E (P4) Acid Phosphatase Reveals a New Member of the Haloacid Dehalogenase Superfamily. Biochemistry 2007 46 11110 0 3CQX 19029896 Chaperone Complex 2008-04-03 2008-11-25 Xu, Z.,Page, R.C.,Gomes, M.M.,Kohli, E.,Nix, J.C.,Herr, A.B.,Patterson, C.,Misra, S. Structural basis of nucleotide exchange and client binding by the Hsp70 cochaperone Bag2 Nat.Struct.Mol.Biol. 2008 15 1309 1317 3D0T 19029896 Structure of the BNB domain of the Hsp70 cochaperone Bag2 2008-05-02 2008-11-25 Xu, Z.,Page, R.C.,Gomes, M.M.,Kohli, E.,Nix, J.C.,Herr, A.B.,Patterson, C.,Misra, S. Structural basis of nucleotide exchange and client binding by the Hsp70 cochaperone Bag2. Nat.Struct.Mol.Biol. 2008 15 1309 1317 3ETW 18996848 Crystal Structure of bacterial adhesin FadA 2008-10-08 2008-12-02 Nithianantham, S.,Xu, M.,Yamada, M.,Ikegami, A.,Shoham, M.,Han, Y.W. Crystal Structure of FadA Adhesin from Fusobacterium nucleatum Reveals a Novel Oligomerization Motif, the Leucine Chain. J.Biol.Chem. 2009 284 3865 3872 3BR2 Crystal Structure of the Complex of Dequalinium Bound to QacR(E120Q), a Mutant of a Multidrug Binding Transcriptional Repressor 2007-12-20 2008-12-23 Brooks, B.E.,Hardie, K.M.,Brown, M.H.,Skurray, R.A.,Brennan, R.G. Formal electrostatic interactions do not govern QacR-cation affinity To be Published 0 0 0 0 3BR3 Crystal Structure of the Complex of Ethidium Bound to QacR(E90Q), a Mutant of a Multidrug Binding Transcriptional Repressor 2007-12-20 2008-12-23 Brooks, B.E.,Hardie, K.M.,Brown, M.H.,Skurray, R.A.,Brennan, R.G. Formal electrostatic interactions do not govern QacR-cation affinity To be Published 0 0 0 0 3BR5 Crystal Structure of the Complex of Rhodamine 6G Bound to QacR(E90Q), a Mutant of a Multidrug Binding Transcriptional Repressor 2007-12-20 2008-12-23 Brooks, B.E.,Hardie, K.M.,Brown, M.H.,Skurray, R.A.,Brennan, R.G. Formal electrostatic interactions do not govern QacR-cation affinity To be Published 0 0 0 0 3BR6 Crystal Structure of the Complex of Rhodamine 6G Bound to QacR(E120Q), a Mutant of a Multidrug Binding Transcriptional Repressor 2007-12-20 2008-12-23 Brooks, B.E.,Hardie, K.M.,Brown, M.H.,Skurray, R.A.,Brennan, R.G. Formal electrostatic interactions do not govern QacR-cation affinity To be Published 0 0 0 0 3F1W 19053247 Crystal structure of a mutant proliferating cell nuclear antigen that blocks translesion synthesis 2008-10-28 2008-12-23 Freudenthal, B.D.,Ramaswamy, S.,Hingorani, M.M.,Washington, M.T. Structure of a Mutant Form of Proliferating Cell Nuclear Antigen That Blocks Translesion DNA Synthesis. Biochemistry 2008 47 13354 13361 3EVA 19101564 Crystal structure of yellow fever virus methyltransferase complexed with S-adenosyl-L-homocysteine 2008-10-13 2009-01-06 Geiss, B.J.,Thompson, A.A.,Andrews, A.J.,Sons, R.L.,Gari, H.H.,Keenan, S.M.,Peersen, O.B. 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Proc.Natl.Acad.Sci.USA 2009 106 411 416 3FQ3 Crystal structure of inorganic phosphatase from brucella melitensis 2009-01-06 2009-01-20 Seattle Structural Genomics Center for Infectious Disease (SSGCID) Crystal structure of inorganic phosphatase from brucella melitensis To be Published 0 0 0 0 3FS2 Crystal structure of 2-Dehydro-3-Deoxyphosphooctonate aldolase from Bruciella melitensis at 1.85A resolution 2009-01-09 2009-01-20 SSGCID Crystal structure of 2-Dehydro-3-Deoxyphosphooctonate aldolase from Bruciella melitensis at 1.85A resolution To be Published 0 0 0 0 3E9U 19361442 Crystal structure of Calx CBD2 domain 2008-08-23 2009-01-27 Wu, M.,Wang, M.,Nix, J.,Hryshko, L.V.,Zheng, L. Crystal structure of CBD2 from the Drosophila Na(+)/Ca(2+) exchanger: diversity of Ca(2+) regulation and its alternative splicing modification. J.Mol.Biol. 2009 387 104 112 3E2S 19140736 Crystal Structure Reduced PutA86-630 Mutant Y540S Complexed with L-proline 2008-08-06 2009-02-03 Ostrander, E.L.,Larson, J.D.,Schuermann, J.P.,Tanner, J.J. A conserved active site tyrosine residue of proline dehydrogenase helps enforce the preference for proline over hydroxyproline as the substrate. Biochemistry 2009 48 951 959 3FGH 19304746 Human mitochondrial transcription factor A box B 2008-12-06 2009-04-07 Gangelhoff, T.A.,Mungalachetty, P.S.,Nix, J.C.,Churchill, M.E. Structural analysis and DNA binding of the HMG domains of the human mitochondrial transcription factor A Nucleic Acids Res. 2009 37 3153 3164 3F6S 19465766 Desulfovibrio desulfuricans (ATCC 29577) oxidized flavodoxin alternate conformers 2008-11-06 2009-06-09 Guelker, M.,Stagg, L.,Wittung-Stafshede, P.,Shamoo, Y. Pseudosymmetry, high copy number and twinning complicate the structure determination of Desulfovibrio desulfuricans (ATCC 29577) flavodoxin. Acta Crystallogr.,Sect.D 2009 65 523 534 2ZYR 19447113 A. Fulgidus lipase with fatty acid fragment and magnesium 2009-01-28 2009-06-16 Chen, C.K.,Lee, G.C.,Ko, T.P.,Guo, R.T.,Huang, L.M.,Liu, H.J.,Ho, Y.F.,Shaw, J.F.,Wang, A.H. Structure of the alkalohyperthermophilic Archaeoglobus fulgidus lipase contains a unique C-terminal domain essential for long-chain substrate binding. J.Mol.Biol. 2009 390 672 685 3GPM 19465770 Structure of the trimeric form of the E113G PCNA mutant protein 2009-03-23 2009-06-16 Freudenthal, B.D.,Gakhar, L.,Ramaswamy, S.,Washington, M.T. A charged residue at the subunit interface of PCNA promotes trimer formation by destabilizing alternate subunit interactions. Acta Crystallogr.,Sect.D 2009 65 560 566 3GPN 19465770 Structure of the non-trimeric form of the E113G PCNA mutant protein 2009-03-23 2009-06-16 Freudenthal, B.D.,Gakhar, L.,Ramaswamy, S.,Washington, M.T. A charged residue at the subunit interface of PCNA promotes trimer formation by destabilizing alternate subunit interactions. Acta Crystallogr.,Sect.D 2009 65 560 566 3HIB 19525970 Crystal structure of the second Sec63 domain of yeast Brr2 2009-05-19 2009-06-16 Zhang, L.,Xu, T.,Maeder, C.,Bud, L.O.,Shanks, J.,Nix, J.,Guthrie, C.,Pleiss, J.A.,Zhao, R. Structural evidence for consecutive Hel308-like modules in the spliceosomal ATPase Brr2. Nat.Struct.Mol.Biol. 2009 16 731 739 3HRU 19795834 Crystal Structure of ScaR with bound Zn2+ 2009-06-09 2009-06-23 Stoll, K.E.,Draper, W.E.,Kliegman, J.I.,Golynskiy, M.V.,Brew-Appiah, R.A.,Phillips, R.K.,Brown, H.K.,Breyer, W.A.,Jakubovics, N.S.,Jenkinson, H.F.,Brennan, R.G.,Cohen, S.M.,Glasfeld, A. Characterization and structure of the manganese-responsive transcriptional regulator ScaR. Biochemistry 2009 48 10308 10320 2WLF 19525232 Crystallographic analysis of the polysialic acid O-acetyltransferase OatWY 2009-06-23 2009-06-30 Lee, H.J.,Rakic, B.,Gilbert, M.,Wakarchuk, W.W.,Withers, S.G.,Strynadka, N.C.J. Structural and Kinetic Characterizations of the Polysialic Acid O-Acetyltransferase Oatwy from Neisseria Meningitidis. J.Biol.Chem. 2009 284 24501 0 3HON 19631658 Crystal Structure of Human Collagen XVIII Trimerization Domain (cubic form) 2009-06-02 2009-08-11 Boudko, S.P.,Sasaki, T.,Engel, J.,Lerch, T.F.,Nix, J.,Chapman, M.S.,Bachinger, H.P. Crystal structure of human collagen XVIII trimerization domain: A novel collagen trimerization Fold. J.Mol.Biol. 2009 392 787 802 3HSH 19631658 Crystal structure of human collagen XVIII trimerization domain (Tetragonal crystal form) 2009-06-10 2009-08-11 Boudko, S.P.,Sasaki, T.,Engel, J.,Lerch, T.F.,Nix, J.,Chapman, M.S.,Bachinger, H.P. Crystal structure of human collagen XVIII trimerization domain: A novel collagen trimerization Fold. J.Mol.Biol. 2009 392 787 802 3FST 19610625 Crystal Structure of Escherichia coli Methylenetetrahydrofolate Reductase Mutant Phe223Leu at pH 7.4 2009-01-12 2009-08-25 Lee, M.N.,Takawira, D.,Nikolova, A.P.,Ballou, D.P.,Furtado, V.C.,Phung, N.L.,Still, B.R.,Thorstad, M.K.,Tanner, J.J.,Trimmer, E.E. Functional role for the conformationally mobile phenylalanine 223 in the reaction of methylenetetrahydrofolate reductase from Escherichia coli. Biochemistry 2009 48 7673 7685 3FSU 19610625 Crystal Structure of Escherichia coli Methylenetetrahydrofolate Reductase Double Mutant Phe223LeuGlu28Gln complexed with methyltetrahydrofolate 2009-01-12 2009-08-25 Lee, M.N.,Takawira, D.,Nikolova, A.P.,Ballou, D.P.,Furtado, V.C.,Phung, N.L.,Still, B.R.,Thorstad, M.K.,Tanner, J.J.,Trimmer, E.E. Functional role for the conformationally mobile phenylalanine 223 in the reaction of methylenetetrahydrofolate reductase from Escherichia coli. Biochemistry 2009 48 7673 7685 3HXG 19710013 Crystal structure of Schistsome eIF4E complexed with m7GpppA and 4E-BP 2009-06-20 2009-08-25 Liu, W.,Zhao, R.,McFarland, C.,Kieft, J.,Niedzwiecka, A.,Jankowska-Anyszka, M.,Stepinski, J.,Darzynkiewicz, E.,Jones, D.N.,Davis, R.E. Structural insights into parasite EIF4E binding specificity for m7G and m2,2,7G mRNA cap. J.Biol.Chem. 2009 284 31336 31349 3HXI 19710013 Crystal structure of Schistosome eIF4E complexed with m7GpppG and 4E-BP 2009-06-20 2009-08-25 Liu, W.,Zhao, R.,McFarland, C.,Kieft, J.,Niedzwiecka, A.,Jankowska-Anyszka, M.,Stepinski, J.,Darzynkiewicz, E.,Jones, D.N.,Davis, R.E. Structural insights into parasite EIF4E binding specificity for m7G and m2,2,7G mRNA cap. J.Biol.Chem. 2009 284 31336 31349 3E9T 19815561 Crystal structure of Apo-form Calx CBD1 domain 2008-08-23 2009-09-01 Wu, M.,Le, H.D.,Wang, M.,Yurkov, V.,Omelchenko, A.,Hnatowich, M.,Nix, J.,Hryshko, L.V.,Zheng, L. Crystal structures of progressive Ca2+ binding states of the Ca2+ sensor Ca2+ binding domain 1 (CBD1) from the CALX Na+/Ca2+ exchanger reveal incremental conformational transitions. J.Biol.Chem. 2010 285 2554 2561 2WQP 19719325 Crystal structure of sialic acid synthase NeuB-inhibitor complex 2009-08-25 2009-09-15 Liu, F.,Lee, H.J.,Strynadka, N.C.J.,Tanner, M.E. The Inhibition of Neisseria Meningitidis Sialic Acid Synthase by a Tetrahedral Intermediate Analog. Biochemistry 2009 48 9194 0 3IRC Crystal structure analysis of dengue-1 envelope protein domain III 2009-08-21 2009-09-29 Nelson, C.A.,Kim, T.,Warren, J.T.,Fremont, D.H. 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Embo J. 2009 28 3269 3276 3IT0 19836403 Crystal Structure Francisella tularensis histidine acid phosphatase complexed with phosphate 2009-08-27 2009-11-10 Singh, H.,Felts, R.L.,Schuermann, J.P.,Reilly, T.J.,Tanner, J.J. Crystal Structures of the histidine acid phosphatase from Francisella tularensis provide insight into substrate recognition. J.Mol.Biol. 2009 394 893 904 3IT1 19836403 Crystal Structure Francisella tularensis histidine acid phosphatase complexed with L(+)-tartrate 2009-08-27 2009-11-10 Singh, H.,Felts, R.L.,Schuermann, J.P.,Reilly, T.J.,Tanner, J.J. Crystal Structures of the histidine acid phosphatase from Francisella tularensis provide insight into substrate recognition. J.Mol.Biol. 2009 394 893 904 3IT2 19836403 Crystal structure of ligand-free Francisella tularensis histidine acid phosphatase 2009-08-27 2009-11-10 Singh, H.,Felts, R.L.,Schuermann, J.P.,Reilly, T.J.,Tanner, J.J. 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J.Mol.Biol. 2013 425 3888 3906 4EWC 24068932 Crystal Structure of the Infectious Salmon Anemia Virus Nucleoprotein 2012-04-26 2013-05-08 Zheng, W.,Olson, J.,Vakharia, V.,Tao, Y.J. The crystal structure and RNA-binding of an orthomyxovirus nucleoprotein. Plos Pathog. 2013 9 0 0 4K4S 23667424 Poliovirus polymerase elongation complex (r3_form) 2013-04-12 2013-05-22 Gong, P.,Kortus, M.G.,Nix, J.C.,Davis, R.E.,Peersen, O.B. Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One 2013 8 0 0 4K4T 23667424 Poliovirus polymerase elongation complex (r4_form) 2013-04-12 2013-05-22 Gong, P.,Kortus, M.G.,Nix, J.C.,Davis, R.E.,Peersen, O.B. Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One 2013 8 0 0 4K4U 23667424 Poliovirus polymerase elongation complex (r5_form) 2013-04-12 2013-05-22 Gong, P.,Kortus, M.G.,Nix, J.C.,Davis, R.E.,Peersen, O.B. Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One 2013 8 0 0 4K4V 23667424 Poliovirus polymerase elongation complex (r5+1_form) 2013-04-12 2013-05-22 Gong, P.,Kortus, M.G.,Nix, J.C.,Davis, R.E.,Peersen, O.B. Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One 2013 8 0 0 4K4W 23667424 Poliovirus polymerase elongation complex (r5+2_form) 2013-04-12 2013-05-22 Gong, P.,Kortus, M.G.,Nix, J.C.,Davis, R.E.,Peersen, O.B. Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One 2013 8 0 0 4K4X 23667424 Coxsackievirus B3 polymerase elongation complex (r2_form), rna 2013-04-12 2013-05-22 Gong, P.,Kortus, M.G.,Nix, J.C.,Davis, R.E.,Peersen, O.B. Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One 2013 8 0 0 4K4Z 23667424 Coxsackievirus B3 polymerase elongation complex (r2_Mg_form) 2013-04-12 2013-05-22 Gong, P.,Kortus, M.G.,Nix, J.C.,Davis, R.E.,Peersen, O.B. Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One 2013 8 0 0 4K50 23667424 Rhinovirus 16 polymerase elongation complex (r1_form) 2013-04-12 2013-05-22 Gong, P.,Kortus, M.G.,Nix, J.C.,Davis, R.E.,Peersen, O.B. Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One 2013 8 0 0 4JYZ 23727144 Crystal structure of E. coli glutaminyl-tRNA synthetase bound to ATP and native tRNA(Gln) containing the cmnm5s2U34 anticodon wobble base 2013-04-01 2013-05-29 Rodriguez-Hernandez, A.,Spears, J.L.,Gaston, K.W.,Limbach, P.A.,Gamper, H.,Hou, Y.M.,Kaiser, R.,Agris, P.F.,Perona, J.J. Structural and Mechanistic Basis for Enhanced Translational Efficiency by 2-Thiouridine at the tRNA Anticodon Wobble Position. J.Mol.Biol. 2013 425 3888 3906 4K4Y 23667424 Coxsackievirus B3 polymerase elongation complex (r2+1_form) 2013-04-12 2013-05-29 Gong, P.,Kortus, M.G.,Nix, J.C.,Davis, R.E.,Peersen, O.B. Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One 2013 8 0 0 4GKX 23709226 Crystal structure of a carbohydrate-binding domain 2012-08-13 2013-06-05 Zheng, C.,Page, R.C.,Das, V.,Nix, J.C.,Wigren, E.,Misra, S.,Zhang, B. Structural Characterization of Carbohydrate Binding by LMAN1 Protein Provides New Insight into the Endoplasmic Reticulum Export of Factors V (FV) and VIII (FVIII). J.Biol.Chem. 2013 288 20499 20509 4F9O Crystal Structure of recombinant human Hexokinase type I with 2-deoxy-Glucose 6-Phosphate 2012-05-19 2013-06-12 Shen, L.,Gao, Y.,Honzatko, R.B. Inhibitor Sites of Unequal Affinity Linked by Binding Synergism in Mutant Forms of Recombinant Human Hexokinase Type-I to be published 0 0 0 0 4JIO 23726974 Bro1 V domain and ubiquitin 2013-03-06 2013-06-19 Pashkova, N.,Gakhar, L.,Winistorfer, S.C.,Sunshine, A.B.,Rich, M.,Dunham, M.J.,Yu, L.,Piper, R.C. The yeast alix homolog bro1 functions as a ubiquitin receptor for protein sorting into multivesicular endosomes. Dev.Cell 2013 25 520 533 4JJY 23726974 Alix V domain 2013-03-08 2013-06-19 Pashkova, N.,Gakhar, L.,Winistorfer, S.C.,Sunshine, A.B.,Rich, M.,Dunham, M.J.,Yu, L.,Piper, R.C. 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Identification of an essential active-site residue in the alpha-D-phosphohexomutase enzyme superfamily. Febs J. 2013 280 2622 2632 4HEH 23982072 Crystal structure of AppA SCHIC domain from Rb. sphaeroides 2012-10-03 2013-09-18 Yin, L.,Dragnea, V.,Feldman, G.,Hammad, L.A.,Karty, J.A.,Dann III, C.E.,Bauer, C.E. Redox and light control the heme-sensing activity of AppA. MBio 2013 4 0 0 4L60 23869605 Structure of C81R Mutant PCNA Protein Defective in Mismatch Repair 2013-06-11 2013-10-02 Dieckman, L.M.,Boehm, E.M.,Hingorani, M.M.,Washington, M.T. Distinct structural alterations in proliferating cell nuclear antigen block DNA mismatch repair. Biochemistry 2013 52 5611 5619 4HM1 Naphthalene 1,2-Dioxygenase bound to 1-indanone 2012-10-17 2013-10-30 Ferraro, D.J.,Ramaswamy, S. Naphthalene 1,2-Dioxygenase bound to 1-indanone To be Published 0 0 0 0 4HM2 Naphthalene 1,2-Dioxygenase bound to ethylphenylsulfide 2012-10-17 2013-10-30 Ferraro, D.J.,Ramaswamy, S. 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Crystal Structure of DENV1-E106 Fab bound to DENV-1 Envelope protein DIII To be Published 0 0 0 0 4MSP 24272907 Crystal structure of human peptidyl-prolyl cis-trans isomerase FKBP22 (aka FKBP14) containing two EF-hand motifs 2013-09-18 2013-12-25 Boudko, S.P.,Ishikawa, Y.,Nix, J.,Chapman, M.S.,Bachinger, H.P. Structure of human peptidyl-prolyl cis-trans isomerase FKBP22 containing two EF-hand motifs. Protein Sci. 2014 23 67 75 4LV4 24325645 A noncompetitive inhibitor for M. tuberculosis's class IIa fructose 1,6-bisphosphate aldolase 2013-07-25 2014-01-08 Capodagli, G.C.,Sedhom, W.G.,Jackson, M.,Ahrendt, K.A.,Pegan, S.D. A Noncompetitive Inhibitor for Mycobacterium tuberculosis's Class IIa Fructose 1,6-Bisphosphate Aldolase. Biochemistry 2014 53 202 213 4K4O The DNA Gyrase B ATP binding domain of Enterococcus faecalis in complex with a small molecule inhibitor 2013-04-12 2014-01-15 Tari, L.W.,Bensen, D.C.,Finn, J. 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Structure 2015 23 472 482 4X0T 25554827 Structure ALDH7A1 inactivated by 4-diethylaminobenzaldehyde and complexed with NAD+ 2014-11-23 2015-01-14 Luo, M.,Gates, K.S.,Henzl, M.T.,Tanner, J.J. Diethylaminobenzaldehyde Is a Covalent, Irreversible Inactivator of ALDH7A1. Acs Chem.Biol. 2015 10 693 697 4X0U 25554827 Structure ALDH7A1 inactivated by 4-diethylaminobenzaldehyde 2014-11-23 2015-01-14 Luo, M.,Gates, K.S.,Henzl, M.T.,Tanner, J.J. Diethylaminobenzaldehyde Is a Covalent, Irreversible Inactivator of ALDH7A1. Acs Chem.Biol. 2015 10 693 697 4W1W 25556942 Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis, complexed with 7-(diethylamino)-3-(thiophene-2-carbonyl)-2H-chromen-2-one 2014-08-13 2015-02-04 Park, S.W.,Casalena, D.E.,Wilson, D.J.,Dai, R.,Nag, P.P.,Liu, F.,Boyce, J.P.,Bittker, J.A.,Schreiber, S.L.,Finzel, B.C.,Schnappinger, D.,Aldrich, C.C. 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The crystal structure of phosphorylated MAPK13 reveals common structural features and differences in p38 MAPK family activation. Acta Crystallogr.,Sect.D 2015 71 790 799 4NXQ 27998539 Crystal Structure of T-cell Lymphoma Invasion and Metastasis-1 PDZ Domain Quadruple Mutant (QM) in Complex With Caspr4 Peptide 2013-12-09 2015-05-13 Liu, X.,Speckhard, D.C.,Shepherd, T.R.,Sun, Y.J.,Hengel, S.R.,Yu, L.,Fowler, C.A.,Gakhar, L.,Fuentes, E.J. Distinct Roles for Conformational Dynamics in Protein-Ligand Interactions. Structure 2016 24 2053 2066 4NXR 27998539 Crystal Structure of T-cell Lymphoma Invasion and Metastasis-1 PDZ Domain Quadruple Mutant (QM) in Complex With Neurexin-1 Peptide 2013-12-09 2015-05-13 Liu, X.,Speckhard, D.C.,Shepherd, T.R.,Sun, Y.J.,Hengel, S.R.,Yu, L.,Fowler, C.A.,Gakhar, L.,Fuentes, E.J. Distinct Roles for Conformational Dynamics in Protein-Ligand Interactions. Structure 2016 24 2053 2066 4XFY 26044298 Structure of the native full-length dehydrated HIV-1 capsid protein 2014-12-29 2015-06-10 Gres, A.T.,Kirby, K.A.,KewalRamani, V.N.,Tanner, J.J.,Pornillos, O.,Sarafianos, S.G. STRUCTURAL VIROLOGY. X-ray crystal structures of native HIV-1 capsid protein reveal conformational variability. Science 2015 349 99 103 4XFZ 26044298 Structure of the native full-length HIV-1 capsid protein in complex with PF-3450074 (PF74) 2014-12-29 2015-06-10 Gres, A.T.,Kirby, K.A.,KewalRamani, V.N.,Tanner, J.J.,Pornillos, O.,Sarafianos, S.G. STRUCTURAL VIROLOGY. X-ray crystal structures of native HIV-1 capsid protein reveal conformational variability. Science 2015 349 99 103 4QSZ Crystal structure of mouse JMJd7 fused with maltose-binding protein 2014-07-06 2015-07-08 Liu, H.,Zhang, G. 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SloR structure and DNA binding studies inform the SloR-SRE interaction in Streptococcus mutans to be published 0 0 0 0 4RJD 25694384 TFP bound in alternate orientations to calcium-saturated Calmodulin C-Domains 2014-10-08 2015-08-26 Feldkamp, M.D.,Gakhar, L.,Pandey, N.,Shea, M.A. Opposing orientations of the anti-psychotic drug trifluoperazine selected by alternate conformations of M144 in calmodulin. Proteins 2015 83 989 996 4ZUK 26260980 Structure ALDH7A1 complexed with NAD+ 2015-05-16 2015-08-26 Luo, M.,Tanner, J.J. Structural Basis of Substrate Recognition by Aldehyde Dehydrogenase 7A1. Biochemistry 2015 54 5513 5522 4ZVY 26260980 Structure of human ALDH7A1 complexed with NAD+ in space group P4212 2015-05-18 2015-08-26 Luo, M.,Tanner, J.J. Structural Basis of Substrate Recognition by Aldehyde Dehydrogenase 7A1. Biochemistry 2015 54 5513 5522 4XU3 26299766 Mycobacterium tuberculosis biotin ligase complexed with bisubstrate inhibitor 90 that has an acyclic ether in place of the ribose 2015-01-24 2015-09-02 Bockman, M.R.,Kalinda, A.S.,Petrelli, R.,De la Mora-Rey, T.,Tiwari, D.,Liu, F.,Dawadi, S.,Nandakumar, M.,Rhee, K.Y.,Schnappinger, D.,Finzel, B.C.,Aldrich, C.C. Targeting Mycobacterium tuberculosis Biotin Protein Ligase (MtBPL) with Nucleoside-Based Bisubstrate Adenylation Inhibitors. J.Med.Chem. 2015 58 7349 7369 4ZEV 26327372 Crystal structure of PfHAD1 in complex with mannose-6-phosphate 2015-04-20 2015-09-09 Park, J.,Guggisberg, A.M.,Odom, A.R.,Tolia, N.H. Cap-domain closure enables diverse substrate recognition by the C2-type haloacid dehalogenase-like sugar phosphatase Plasmodium falciparum HAD1. Acta Crystallogr. D Biol. 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Crys 2015 71 1824 1834 5D7E 26341557 Crystal structure of Taf14 YEATS domain in complex with H3K9ac 2015-08-13 2015-09-23 Shanle, E.K.,Andrews, F.H.,Meriesh, H.,McDaniel, S.L.,Dronamraju, R.,DiFiore, J.V.,Jha, D.,Wozniak, G.G.,Bridgers, J.B.,Kerschner, J.L.,Krajewski, K.,Martin, G.M.,Morrison, A.J.,Kutateladze, T.G.,Strahl, B.D. Association of Taf14 with acetylated histone H3 directs gene transcription and the DNA damage response. Genes Dev. 2015 29 1795 1800 4XZQ 26416878 Nucleosome disassembly by RSC and SWI/SNF is enhanced by H3 acetylation near the nucleosome dyad axis 2015-02-04 2015-10-14 Chatterjee, N.,North, J.A.,Dechassa, M.L.,Manohar, M.,Prasad, R.,Luger, K.,Ottesen, J.J.,Poirier, M.G.,Bartholomew, B. Histone Acetylation near the Nucleosome Dyad Axis Enhances Nucleosome Disassembly by RSC and SWI/SNF. Mol.Cell.Biol. 2015 35 4083 4092 4YS3 26416878 Nucleosome disassembly by RSC and SWI/SNF is enhanced by H3 acetylation near the nucleosome dyad axis 2015-03-16 2015-10-14 Chatterjee, N.,North, J.A.,Dechassa, M.L.,Manohar, M.,Prasad, R.,Luger, K.,Ottesen, J.J.,Poirier, M.G.,Bartholomew, B. Histone Acetylation near the Nucleosome Dyad Axis Enhances Nucleosome Disassembly by RSC and SWI/SNF. Mol.Cell.Biol. 2015 35 4083 4092 4Z66 26416878 Nucleosome disassembly by RSC and SWI/SNF is enhanced by H3 acetylation near the nucleosome dyad axis 2015-04-03 2015-10-14 Chatterjee, N.,North, J.A.,Dechassa, M.L.,Manohar, M.,Prasad, R.,Luger, K.,Ottesen, J.J.,Poirier, M.G.,Bartholomew, B. Histone Acetylation near the Nucleosome Dyad Axis Enhances Nucleosome Disassembly by RSC and SWI/SNF. Mol.Cell.Biol. 2015 35 4083 4092 5AWN 26404402 Crystal structure of Human anti-HIV-1 broadly neutralizing antibody 3BC176 Fab 2015-07-06 2015-11-11 Lee, J.H.,Leaman, D.P.,Kim, A.S.,Torrents de la Pena, A.,Sliepen, K.,Yasmeen, A.,Derking, R.,Ramos, A.,de Taeye, S.W.,Ozorowski, G.,Klein, F.,Burton, D.R.,Nussenzweig, M.C.,Poignard, P.,Moore, J.P.,Klasse, P.J.,Sanders, R.W.,Zwick, M.B.,Wilson, I.A.,Ward, A.B. Antibodies to a conformational epitope on gp41 neutralize HIV-1 by destabilizing the Env spike. Nat Commun 2015 6 8167 8167 5BXF Apo FcRn Structure at pH 4.5 2015-06-08 2015-11-11 Nam, H.-J.,Taha, M. Human Fc-Receptor Neonatal at low pH gives insights into different states of FcRn To Be Published 0 0 0 0 4ZLT 26671708 Crystal structure of viral chemokine binding protein R17 in complex with CCL3 2015-05-01 2015-11-18 Lubman, O.Y.,Fremont, D.H. Parallel Evolution of Chemokine Binding by Structurally Related Herpesvirus Decoy Receptors. Structure 2016 24 57 69 4ZZ1 26317331 HUMAN GAR TRANSFORMYLASE IN COMPLEX WITH GAR AND (S)-2-({4-[3-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-6-YL)-PROPYL]-THIOPHENE-2-CARBONYL}-AMINO)-PENTANEDIOIC ACID 2015-05-22 2015-12-16 Wang, L.,Wallace, A.,Raghavan, S.,Deis, S.M.,Wilson, M.R.,Yang, S.,Polin, L.,White, K.,Kushner, J.,Orr, S.,George, C.,O'Connor, C.,Hou, Z.,Mitchell-Ryan, S.,Dann, C.E.,Matherly, L.H.,Gangjee, A. 6-Substituted Pyrrolo[2,3-d]pyrimidine Thienoyl Regioisomers as Targeted Antifolates for Folate Receptor alpha and the Proton-Coupled Folate Transporter in Human Tumors. J.Med.Chem. 2015 58 6938 6959 4ZZ2 26317331 HUMAN GAR TRANSFORMYLASE IN COMPLEX WITH GAR AND (S)-2-({5-[3-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-6-YL)-PROPYL]-THIOPHENE-3-CARBONYL}-AMINO)-PENTANEDIOIC ACID 2015-05-22 2015-12-16 Wang, L.,Wallace, A.,Raghavan, S.,Deis, S.M.,Wilson, M.R.,Yang, S.,Polin, L.,White, K.,Kushner, J.,Orr, S.,George, C.,O'Connor, C.,Hou, Z.,Mitchell-Ryan, S.,Dann, C.E.,Matherly, L.H.,Gangjee, A. 6-Substituted Pyrrolo[2,3-d]pyrimidine Thienoyl Regioisomers as Targeted Antifolates for Folate Receptor alpha and the Proton-Coupled Folate Transporter in Human Tumors. J.Med.Chem. 2015 58 6938 6959 4ZZ3 26317331 Human GAR transformylase in complex with GAR and pemetrexed 2015-05-22 2015-12-16 Wang, L.,Wallace, A.,Raghavan, S.,Deis, S.M.,Wilson, M.R.,Yang, S.,Polin, L.,White, K.,Kushner, J.,Orr, S.,George, C.,O'Connor, C.,Hou, Z.,Mitchell-Ryan, S.,Dann, C.E.,Matherly, L.H.,Gangjee, A. 6-Substituted Pyrrolo[2,3-d]pyrimidine Thienoyl Regioisomers as Targeted Antifolates for Folate Receptor alpha and the Proton-Coupled Folate Transporter in Human Tumors. J.Med.Chem. 2015 58 6938 6959 5ERC 26626149 X-ray crystal structure of BRPF1 PZP domain 2015-11-13 2015-12-30 Klein, B.J.,Muthurajan, U.M.,Lalonde, M.E.,Gibson, M.D.,Andrews, F.H.,Hepler, M.,Machida, S.,Yan, K.,Kurumizaka, H.,Poirier, M.G.,Cote, J.,Luger, K.,Kutateladze, T.G. Bivalent interaction of the PZP domain of BRPF1 with the nucleosome impacts chromatin dynamics and acetylation. Nucleic Acids Res. 2016 44 472 484 5HHF 26836146 Crystal structure of Aspergillus fumigatus UDP-Galactopyranose mutase mutant H63A with covalent FAD-Galactopyranose and bound UDP 2016-01-10 2016-02-17 Mehra-Chaudhary, R.,Dai, Y.,Sobrado, P.,Tanner, J.J. In Crystallo Capture of a Covalent Intermediate in the UDP-Galactopyranose Mutase Reaction. Biochemistry 2016 55 833 836 5F14 26866284 Structure of native hen egg-white lysozyme 2015-11-30 2016-02-24 Lucius, M.,Falatach, R.,McGlone, C.,Makaroff, K.,Danielson, A.,Williams, C.,Nix, J.C.,Konkolewicz, D.,Page, R.C.,Berberich, J.A. Investigating the Impact of Polymer Functional Groups on the Stability and Activity of Lysozyme-Polymer Conjugates. Biomacromolecules 2016 17 1123 1134 5F16 26866284 CTA-modified hen egg-white lysozyme 2015-11-30 2016-02-24 Lucius, M.,Falatach, R.,McGlone, C.,Makaroff, K.,Danielson, A.,Williams, C.,Nix, J.C.,Konkolewicz, D.,Page, R.C.,Berberich, J.A. Investigating the Impact of Polymer Functional Groups on the Stability and Activity of Lysozyme-Polymer Conjugates. Biomacromolecules 2016 17 1123 1134 5HBM Crystal Structure of a Dihydroxycoumarin RNase H Active-Site Inhibitor in Complex with HIV-1 Reverse Transcriptase 2015-12-31 2016-02-24 Kirby, K.A.,Sarafianos, S.G. Crystal Structure of a Dihydroxycoumarin RNase H Active-Site Inhibitor in Complex with HIV-1 Reverse Transcriptase To Be Published 0 0 0 0 5I61 27078841 Crystal structure of the RNA-dependent RNA polymerase of a human picorbirnavirus 2016-02-15 2016-03-16 Collier, A.M.,Lyytinen, O.L.,Guo, Y.R.,Toh, Y.,Poranen, M.M.,Tao, Y.J. Initiation of RNA Polymerization and Polymerase Encapsidation by a Small dsRNA Virus. Plos Pathog. 2016 12 0 0 5I1U 26998816 Crystal structure of germacradien-4-ol synthase from Streptomyces citricolor 2016-02-06 2016-03-30 Grundy, D.J.,Chen, M.,Gonzalez, V.,Leoni, S.,Miller, D.J.,Christianson, D.W.,Allemann, R.K. Mechanism of Germacradien-4-ol Synthase-Controlled Water Capture. Biochemistry 2016 55 2112 2121 4ZYT 27439469 Human GAR transformylase in complex with GAR and N-{4-[4-(2-Amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-6-yl)benzyl]benzoyl}-L-glutamic acid (AGF23) 2015-05-22 2016-04-20 Deis, S.M.,Doshi, A.,Hou, Z.,Matherly, L.H.,Gangjee, A.,Dann, C.E. Structural and Enzymatic Analysis of Tumor-Targeted Antifolates That Inhibit Glycinamide Ribonucleotide Formyltransferase. Biochemistry 2016 55 4574 4582 4ZYU 27439469 Human GAR transformylase in complex with GAR and N-{4-[4-(2-Amino-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidin-6-yl)-butyl]benzoyl}-L-glutamic acid (AGF50) 2015-05-22 2016-04-20 Deis, S.M.,Doshi, A.,Hou, Z.,Matherly, L.H.,Gangjee, A.,Dann, C.E. Structural and Enzymatic Analysis of Tumor-Targeted Antifolates That Inhibit Glycinamide Ribonucleotide Formyltransferase. Biochemistry 2016 55 4574 4582 4ZYV 27439469 Human GAR transformylase in complex with GAR and N-({5-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-6-yl)butyl]thiophen-2-yl}carbonyl)-L-glutamic acid (AGF71) 2015-05-22 2016-04-20 Deis, S.M.,Doshi, A.,Hou, Z.,Matherly, L.H.,Gangjee, A.,Dann, C.E. Structural and Enzymatic Analysis of Tumor-Targeted Antifolates That Inhibit Glycinamide Ribonucleotide Formyltransferase. Biochemistry 2016 55 4574 4582 4ZYW 27439469 Human GAR transformylase in complex with GAR and N-({5-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-6-yl)propyl]thiophen-2-yl}carbonyl)-L-glutamic acid (AGF94) 2015-05-22 2016-04-20 Deis, S.M.,Doshi, A.,Hou, Z.,Matherly, L.H.,Gangjee, A.,Dann, C.E. Structural and Enzymatic Analysis of Tumor-Targeted Antifolates That Inhibit Glycinamide Ribonucleotide Formyltransferase. Biochemistry 2016 55 4574 4582 4ZYX 27439469 Human GAR transformylase in complex with GAR and (S)-2-({4-[4-(2-Amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]-pyrimidin-6-yl)butyl]thiophene-2-carbonyl}amino)pentanedioic acid (AGF117) 2015-05-22 2016-04-20 Deis, S.M.,Doshi, A.,Hou, Z.,Matherly, L.H.,Gangjee, A.,Dann, C.E. Structural and Enzymatic Analysis of Tumor-Targeted Antifolates That Inhibit Glycinamide Ribonucleotide Formyltransferase. Biochemistry 2016 55 4574 4582 4ZYY 27439469 Human GAR transformylase in complex with GAR and (S)-2-({5-[4-(2-Amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]-pyrimidin-6-yl)butyl]thiophene-3-carbonyl}amino)pentanedioic acid (AGF118) 2015-05-22 2016-04-20 Deis, S.M.,Doshi, A.,Hou, Z.,Matherly, L.H.,Gangjee, A.,Dann, C.E. Structural and Enzymatic Analysis of Tumor-Targeted Antifolates That Inhibit Glycinamide Ribonucleotide Formyltransferase. Biochemistry 2016 55 4574 4582 4ZYZ 27439469 Human GAR transformylase in complex with GAR and (S)-2-(7-(2-Amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-6-yl)heptanamido)pentanedioic acid (AGF145) 2015-05-22 2016-04-20 Deis, S.M.,Doshi, A.,Hou, Z.,Matherly, L.H.,Gangjee, A.,Dann, C.E. Structural and Enzymatic Analysis of Tumor-Targeted Antifolates That Inhibit Glycinamide Ribonucleotide Formyltransferase. Biochemistry 2016 55 4574 4582 4ZZ0 27439469 Human GAR transformylase in complex with GAR and (S)-2-(8-(2-Amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-6-yl)octanamido)pentanedioic acid (AGF147) 2015-05-22 2016-04-20 Deis, S.M.,Doshi, A.,Hou, Z.,Matherly, L.H.,Gangjee, A.,Dann, C.E. Structural and Enzymatic Analysis of Tumor-Targeted Antifolates That Inhibit Glycinamide Ribonucleotide Formyltransferase. Biochemistry 2016 55 4574 4582 5EBL 27150040 KcsA T75G in the Conductive State 2015-10-19 2016-04-20 Matulef, K.,Annen, A.W.,Nix, J.C.,Valiyaveetil, F.I. Individual Ion Binding Sites in the K(+) Channel Play Distinct Roles in C-type Inactivation and in Recovery from Inactivation. Structure 2016 24 750 761 5EBM 27150040 KcsA T75G mutant in the nonconductive state 2015-10-19 2016-04-20 Matulef, K.,Annen, A.W.,Nix, J.C.,Valiyaveetil, F.I. Individual Ion Binding Sites in the K(+) Channel Play Distinct Roles in C-type Inactivation and in Recovery from Inactivation. Structure 2016 24 750 761 5EBW 27150040 KcsA with G77ester mutation 2015-10-19 2016-04-20 Matulef, K.,Annen, A.W.,Nix, J.C.,Valiyaveetil, F.I. Individual Ion Binding Sites in the K(+) Channel Play Distinct Roles in C-type Inactivation and in Recovery from Inactivation. Structure 2016 24 750 761 5EC1 27150040 KcsA with V76ester mutation 2015-10-20 2016-04-20 Matulef, K.,Annen, A.W.,Nix, J.C.,Valiyaveetil, F.I. Individual Ion Binding Sites in the K(+) Channel Play Distinct Roles in C-type Inactivation and in Recovery from Inactivation. Structure 2016 24 750 761 5EC2 27150040 KcsA with V76ester+G77dA mutations 2015-10-20 2016-04-20 Matulef, K.,Annen, A.W.,Nix, J.C.,Valiyaveetil, F.I. Individual Ion Binding Sites in the K(+) Channel Play Distinct Roles in C-type Inactivation and in Recovery from Inactivation. Structure 2016 24 750 761 5EPC 26972339 Crystal structure of wild-type human phosphoglucomutase 1 2015-11-11 2016-04-27 Stiers, K.M.,Kain, B.N.,Graham, A.C.,Beamer, L.J. Induced Structural Disorder as a Molecular Mechanism for Enzyme Dysfunction in Phosphoglucomutase 1 Deficiency. J.Mol.Biol. 2016 428 1493 1505 5F9C 26972339 Crystal structure of the G121R mutant of human phosphoglucomutase 1 2015-12-09 2016-04-27 Stiers, K.M.,Kain, B.N.,Graham, A.C.,Beamer, L.J. Induced Structural Disorder as a Molecular Mechanism for Enzyme Dysfunction in Phosphoglucomutase 1 Deficiency. 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Structural analysis of cofactor binding for a prolyl 4-hydroxylase from the pathogenic bacterium Bacillus anthracis. Acta Crystallogr D Struct Biol 2016 72 675 681 4ZP6 27137934 Coxsackievirus B3 Polymerase - F364A mutant 2015-05-07 2016-05-11 McDonald, S.,Block, A.,Beaucourt, S.,Moratorio, G.,Vignuzzi, M.,Peersen, O.B. Design of a Genetically Stable High Fidelity Coxsackievirus B3 Polymerase That Attenuates Virus Growth in Vivo. J.Biol.Chem. 2016 291 13999 14011 4ZP7 27137934 Coxsackievirus B3 Polymerase - F364V mutant 2015-05-07 2016-05-11 McDonald, S.,Block, A.,Beaucourt, S.,Moratorio, G.,Vignuzzi, M.,Peersen, O.B. Design of a Genetically Stable High Fidelity Coxsackievirus B3 Polymerase That Attenuates Virus Growth in Vivo. J.Biol.Chem. 2016 291 13999 14011 4ZP8 27137934 Coxsackievirus B3 Polymerase - F364L mutant 2015-05-07 2016-05-11 McDonald, S.,Block, A.,Beaucourt, S.,Moratorio, G.,Vignuzzi, M.,Peersen, O.B. 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Broadly neutralizing epitopes in the Plasmodium vivax vaccine candidate Duffy Binding Protein. Proc.Natl.Acad.Sci.USA 2016 113 6277 6282 5J1E 27094954 Crystal Structure of a Hydroxypyridone Carboxylic Acid Active-Site RNase H Inhibitor in Complex with HIV Reverse Transcriptase 2016-03-29 2016-06-15 Kankanala, J.,Kirby, K.A.,Liu, F.,Miller, L.,Nagy, E.,Wilson, D.J.,Parniak, M.A.,Sarafianos, S.G.,Wang, Z. Design, Synthesis, and Biological Evaluations of Hydroxypyridonecarboxylic Acids as Inhibitors of HIV Reverse Transcriptase Associated RNase H. J.Med.Chem. 2016 59 5051 5062 5BZC Crystal structure of the murine CD44 hyaluronan binding domain complex with a small molecule 2015-06-11 2016-06-29 Liu, L.K.,Finzel, B.C. Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule To Be Published 0 0 0 0 5BZG Crystal structure of the murine CD44 hyaluronan binding domain complex with a small molecule 2015-06-11 2016-06-29 Liu, L.K.,Finzel, B.C. 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Crystal structure of DNA dodecamer D(CGCGAATTCGCG) To Be Published 0 0 0 0 6CQK 29931186 Crystal Structure of mitochondrial single-stranded DNA binding proteins from S. cerevisiae, Rim1 (Form1) 2018-03-15 2018-05-30 Singh, S.P.,Kukshal, V.,De Bona, P.,Antony, E.,Galletto, R. The mitochondrial single-stranded DNA binding protein from S. cerevisiae, Rim1, does not form stable homo-tetramers and binds DNA as a dimer of dimers. Nucleic Acids Res. 2018 46 7193 7205 6CQM 29931186 Crystal Structure of mitochondrial single-stranded DNA binding proteins from S. cerevisiae, Rim1 (Form2) 2018-03-15 2018-05-30 Singh, S.P.,Kukshal, V.,De Bona, P.,Antony, E.,Galletto, R. The mitochondrial single-stranded DNA binding protein from S. cerevisiae, Rim1, does not form stable homo-tetramers and binds DNA as a dimer of dimers. 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Structure and Functional Characterization of Human Histidine Triad Nucleotide-Binding Protein 1 Mutations Associated with Inherited Axonal Neuropathy with Neuromyotonia. J. Mol. Biol. 2018 430 2709 2721 5V7D 29921126 T4 lysozyme Y18Ymbr 2017-03-20 2018-06-20 Carlsson, A.C.,Scholfield, M.R.,Rowe, R.K.,Ford, M.C.,Alexander, A.T.,Mehl, R.A.,Ho, P.S. Increasing Enzyme Stability and Activity through Hydrogen Bond-Enhanced Halogen Bonds. Biochemistry 2018 57 4135 4147 5V7E 29921126 T4 lysozyme Y18Ymcl 2017-03-20 2018-06-20 Carlsson, A.C.,Scholfield, M.R.,Rowe, R.K.,Ford, M.C.,Alexander, A.T.,Mehl, R.A.,Ho, P.S. Increasing Enzyme Stability and Activity through Hydrogen Bond-Enhanced Halogen Bonds. Biochemistry 2018 57 4135 4147 5V7F 29921126 T4 lysozyme Y18Ymi 2017-03-20 2018-06-20 Carlsson, A.C.,Scholfield, M.R.,Rowe, R.K.,Ford, M.C.,Alexander, A.T.,Mehl, R.A.,Ho, P.S. Increasing Enzyme Stability and Activity through Hydrogen Bond-Enhanced Halogen Bonds. Biochemistry 2018 57 4135 4147 5VBI 30122451 Crystal Structure of the R515W missense variant of human PGM1 2017-03-29 2018-06-20 Stiers, K.M.,Beamer, L.J. A Hotspot for Disease-Associated Variants of Human PGM1 Is Associated with Impaired Ligand Binding and Loop Dynamics. Structure 2018 26 1337 0 5VG7 30122451 Crystal Structure of the R503Q missense variant of human PGM1 2017-04-10 2018-06-20 Stiers, K.M.,Beamer, L.J. A Hotspot for Disease-Associated Variants of Human PGM1 Is Associated with Impaired Ligand Binding and Loop Dynamics. Structure 2018 26 1337 0 6D3P 29866852 Crystal structure of an exoribonuclease-resistant RNA from Sweet clover necrotic mosaic virus (SCNMV) 2018-04-16 2018-06-20 Steckelberg, A.L.,Akiyama, B.M.,Costantino, D.A.,Sit, T.L.,Nix, J.C.,Kieft, J.S. A folded viral noncoding RNA blocks host cell exoribonucleases through a conformationally dynamic RNA structure. Proc. Natl. Acad. Sci. U.S.A. 2018 115 6404 6409 5VEC 30122451 Crystal Structure of the R515L missense variant of human PGM1 2017-04-04 2018-06-27 Stiers, K.M.,Beamer, L.J. A Hotspot for Disease-Associated Variants of Human PGM1 Is Associated with Impaired Ligand Binding and Loop Dynamics. Structure 2018 26 1337 0 5VIN 30122451 Crystal Structure of the R515Q missense variant of human PGM1 2017-04-17 2018-06-27 Stiers, K.M.,Beamer, L.J. A Hotspot for Disease-Associated Variants of Human PGM1 Is Associated with Impaired Ligand Binding and Loop Dynamics. Structure 2018 26 1337 0 6CDA 29953213 Crystal structure of L34A CzrA in the Zn(II)bound state 2018-02-08 2018-07-11 Capdevila, D.A.,Edmonds, K.A.,Campanello, G.C.,Wu, H.,Gonzalez-Gutierrez, G.,Giedroc, D.P. Functional Role of Solvent Entropy and Conformational Entropy of Metal Binding in a Dynamically Driven Allosteric System. J. Am. Chem. Soc. 2018 140 9108 9119 6CDB 29953213 Crystal Structure of V66L CzrA in the Zn(II)bound state 2018-02-08 2018-07-11 Capdevila, D.A.,Edmonds, K.A.,Campanello, G.C.,Wu, H.,Gonzalez-Gutierrez, G.,Giedroc, D.P. Functional Role of Solvent Entropy and Conformational Entropy of Metal Binding in a Dynamically Driven Allosteric System. J. Am. Chem. Soc. 2018 140 9108 9119 6E68 NAMPT co-crystal with inhibitor compound 2 2018-07-24 2018-08-08 Neumann, C.S.,Olivas, K.C.,Anderson, M.E.,Cochran, J.H.,Jin, S.,Li, F.,Loftus, L.V.,Meyer, D.W.,Neale, J.,Nix, J.C.,Pittman, P.G.,Simmons, J.K.,Ulrich, M.L.,Waight, A.B.,Wong, A.,Zaval, M.C.,Zeng, W.,Lyon, R.P.,Senter, P.D. NAMPT co-crystal with inhibitor compound 2 to be published 0 0 0 0 6CQS 30106565 Sediminispirochaeta smaragdinae SPS-1 metallo-beta-lactamase 2018-03-16 2018-08-29 Cheng, Z.,VanPelt, J.,Bergstrom, A.,Bethel, C.,Katko, A.,Miller, C.,Mason, K.,Cumming, E.,Zhang, H.,Kimble, R.L.,Fullington, S.,Bretz, S.L.,Nix, J.C.,Bonomo, R.A.,Tierney, D.L.,Page, R.C.,Crowder, M.W. A Noncanonical Metal Center Drives the Activity of the Sediminispirochaeta smaragdinae Metallo-beta-lactamase SPS-1. Biochemistry 2018 57 5218 5229 6DS6 30150647 Crystal structure of p300 ZZ domain in complex with histone H3 peptide 2018-06-13 2018-08-29 Zhang, Y.,Xue, Y.,Shi, J.,Ahn, J.,Mi, W.,Ali, M.,Wang, X.,Klein, B.J.,Wen, H.,Li, W.,Shi, X.,Kutateladze, T.G. The ZZ domain of p300 mediates specificity of the adjacent HAT domain for histone H3. Nat. Struct. Mol. Biol. 2018 25 841 849 6AXS Structure of the V11I/T58A/P122A mutant of the HIV-1 capsid protein 2017-09-07 2018-09-12 Novikova, M.,Gres, A.T.,Kirby, K.A.,Sarafianos, S.G.,Freed, E.O. Identification of a novel element in HIV-1 capsid critical for assembly and maturation To be published 0 0 0 0 6AXV Structure of the T58S/T107I/P122A mutant of the HIV-1 capsid protein in complex with PF-3450074 (PF74) 2017-09-07 2018-09-12 Novikova, M.,Gres, A.T.,Kirby, K.A.,Sarafianos, S.G.,Freed, E.O. Identification of a novel element in HIV-1 capsid critical for assembly and maturation To be published 0 0 0 0 6AXW 30327442 Structure of the I124A mutant of the HIV-1 capsid protein 2017-09-07 2018-09-12 Novikova, M.,Adams, L.J.,Fontana, J.,Gres, A.T.,Balasubramaniam, M.,Winkler, D.C.,Kudchodkar, S.B.,Soheilian, F.,Sarafianos, S.G.,Steven, A.C.,Freed, E.O. Identification of a Structural Element in HIV-1 Gag Required for Virus Particle Assembly and Maturation. 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Nat Commun 2023 14 5614 5614 6C6Q 30194229 Crystal Structure of the Murine Norovirus VP1 P Domain in complex with the CD300lf Receptor 2018-01-19 2018-09-12 Nelson, C.A.,Wilen, C.B.,Dai, Y.N.,Orchard, R.C.,Kim, A.S.,Stegeman, R.A.,Hsieh, L.L.,Smith, T.J.,Virgin, H.W.,Fremont, D.H. Structural basis for murine norovirus engagement of bile acids and the CD300lf receptor. Proc. Natl. Acad. Sci. U.S.A. 2018 115 0 0 6C74 30194229 Crystal Structure of Murine CD300lf in complex with phosphocholine 2018-01-19 2018-09-12 Nelson, C.A.,Wilen, C.B.,Dai, Y.N.,Orchard, R.C.,Kim, A.S.,Stegeman, R.A.,Hsieh, L.L.,Smith, T.J.,Virgin, H.W.,Fremont, D.H. Structural basis for murine norovirus engagement of bile acids and the CD300lf receptor. Proc. Natl. Acad. Sci. 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U.S.A. 2018 115 0 0 5YYB 30315109 Crystal structure of Sialic acid Binding protein from Haemophilus ducreyi with Neu5Gc 2017-12-08 2018-10-24 Gangi Setty, T.,Mowers, J.C.,Hobbs, A.G.,Maiya, S.P.,Syed, S.,Munson Jr., R.S.,Apicella, M.A.,Subramanian, R. Molecular characterization of the interaction of sialic acid with the periplasmic binding protein fromHaemophilus ducreyi. J. Biol. Chem. 2018 293 20073 20084 6BA8 30355735 YbtT - Type II thioesterase from Yersiniabactin NRPS/PKS biosynthetic pathway 2017-10-12 2018-10-31 Ohlemacher, S.I.,Xu, Y.,Kober, D.L.,Malik, M.,Nix, J.C.,Brett, T.J.,Henderson, J.P. YbtT is a low-specificity type II thioesterase that maintains production of the metallophore yersiniabactin in pathogenic enterobacteria. J. Biol. Chem. 2018 293 19572 19585 6BA9 30355735 YbtT - Type II thioesterase from Yersiniabactin NRPS/PKS biosynthetic pathway- S89A mutant 2017-10-12 2018-10-31 Ohlemacher, S.I.,Xu, Y.,Kober, D.L.,Malik, M.,Nix, J.C.,Brett, T.J.,Henderson, J.P. 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Nat Commun 2018 9 4574 4574 6BQU Human GR (418-507) in complex with monomeric DNA binding site 2017-11-28 2018-12-05 Pufall, M.A. General and sequence-specific roles for DNA in glucocorticoid receptor DNA-binding stoichiometry To Be Published 0 0 0 0 6BSF Human GR (418-507) in complex with monomeric DNA binding site 2017-12-02 2018-12-05 Pufall, M.A. General and sequence-specific roles for DNA in glucocorticoid receptor DNA-binding stoichiometry To Be Published 0 0 0 0 6E5X 30550789 Crystal structure of Ebola virus VP30 C-terminus/RBBP6 peptide complex 2018-07-23 2018-12-12 Batra, J.,Hultquist, J.F.,Liu, D.,Shtanko, O.,Von Dollen, J.,Satkamp, L.,Jang, G.M.,Luthra, P.,Schwarz, T.M.,Small, G.I.,Arnett, E.,Anantpadma, M.,Reyes, A.,Leung, D.W.,Kaake, R.,Haas, P.,Schmidt, C.B.,Schlesinger, L.S.,LaCount, D.J.,Davey, R.A.,Amarasinghe, G.K.,Basler, C.F.,Krogan, N.J. Protein Interaction Mapping Identifies RBBP6 as a Negative Regulator of Ebola Virus Replication. Cell 2018 175 1917 0 6MVR 30529746 Structure of a bacterial ALDH16 2018-10-28 2018-12-26 Liu, L.K.,Tanner, J.J. Crystal Structure of Aldehyde Dehydrogenase 16 Reveals Trans-Hierarchical Structural Similarity and a New Dimer. J. Mol. Biol. 2019 431 524 541 6MVT 30529746 Structure of a bacterial ALDH16 complexed with NADH 2018-10-28 2018-12-26 Liu, L.K.,Tanner, J.J. Crystal Structure of Aldehyde Dehydrogenase 16 Reveals Trans-Hierarchical Structural Similarity and a New Dimer. J. Mol. Biol. 2019 431 524 541 6D97 30580036 Structure of aldehyde dehydrogenase 12 (ALDH12) from Zea mays 2018-04-27 2019-01-09 Korasick, D.A.,Koncitikova, R.,Kopecna, M.,Hajkova, E.,Vigouroux, A.,Morera, S.,Becker, D.F.,Sebela, M.,Tanner, J.J.,Kopecny, D. Structural and Biochemical Characterization of Aldehyde Dehydrogenase 12, the Last Enzyme of Proline Catabolism in Plants. J. Mol. 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Nat Commun 2018 9 5074 5074 6O1E 30850548 The crystal structure of human MORC3 ATPase-CW in complex with AMPPNP 2019-02-19 2019-03-20 Zhang, Y.,Klein, B.J.,Cox, K.L.,Bertulat, B.,Tencer, A.H.,Holden, M.R.,Wright, G.M.,Black, J.,Cardoso, M.C.,Poirier, M.G.,Kutateladze, T.G. Mechanism for autoinhibition and activation of the MORC3 ATPase. Proc. Natl. Acad. Sci. U.S.A. 2019 116 6111 6119 6MYE 31248911 Crystal structure of human Scribble PDZ1 domain in complex with internal PDZ binding motif of Src homology 3 domain-containing guanine nucleotide exchange factor (SGEF) 2018-11-01 2019-04-10 Awadia, S.,Huq, F.,Arnold, T.R.,Goicoechea, S.M.,Sun, Y.J.,Hou, T.,Kreider-Letterman, G.,Massimi, P.,Banks, L.,Fuentes, E.J.,Miller, A.L.,Garcia-Mata, R. SGEF forms a complex with Scribble and Dlg1 and regulates epithelial junctions and contractility. 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Substitutions of Amino Acid Residues in the Substrate Binding Site of Horse Liver Alcohol Dehydrogenase Have Small Effects on the Structures but Significantly Affect Catalysis of Hydrogen Transfer. Biochemistry 2020 59 862 879 6DLI Crystal structure of glutamate racemase from Thermus thermophilus in complex with Beta-chloro-D-alanine 2018-06-01 2019-06-05 Cooling, G.T.,Vance, N.R.,Spies, M.A. Crystal structure of glutamate racemase from Thermus Thermophilus in complex with Beta-chloro-D-alanine To be Published 0 0 0 0 6OAN 31133752 Structure of DBP in complex with human neutralizing antibody 053054 2019-03-18 2019-06-12 Urusova, D.,Carias, L.,Huang, Y.,Nicolete, V.C.,Popovici, J.,Roesch, C.,Salinas, N.D.,Witkowski, B.,Ferreira, M.U.,Adams, J.H.,Gross, M.L.,King, C.L.,Tolia, N.H. Structural basis for neutralization of Plasmodium vivax by naturally acquired human antibodies that target DBP. 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Sci Rep 2020 10 3300 3300 6CDX 31611594 High-resolution crystal structure of fluoropropylated cystine knot, binding to alpha-5 beta-6 integrin 2018-02-09 2019-08-14 Kimura, R.H.,Wang, L.,Shen, B.,Huo, L.,Tummers, W.,Filipp, F.V.,Guo, H.H.,Haywood, T.,Abou-Elkacem, L.,Baratto, L.,Habte, F.,Devulapally, R.,Witney, T.H.,Cheng, Y.,Tikole, S.,Chakraborti, S.,Nix, J.,Bonagura, C.A.,Hatami, N.,Mooney, J.J.,Desai, T.,Turner, S.,Gaster, R.S.,Otte, A.,Visser, B.C.,Poultsides, G.A.,Norton, J.,Park, W.,Stolowitz, M.,Lau, K.,Yang, E.,Natarajan, A.,Ilovich, O.,Srinivas, S.,Srinivasan, A.,Paulmurugan, R.,Willmann, J.,Chin, F.T.,Cheng, Z.,Iagaru, A.,Li, F.,Gambhir, S.S. Evaluation of integrin alpha v beta6cystine knot PET tracers to detect cancer and idiopathic pulmonary fibrosis. Nat Commun 2019 10 4673 4673 6ECL Crystal Structure of a 1,2,4-Triazole Allosteric RNase H Inhibitor in Complex with HIV Reverse Transcriptase 2018-08-08 2019-08-21 Kirby, K.A.,Sarafianos, S.G. 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Biphenyl Gal and GalNAc FmlH Lectin Antagonists of Uropathogenic E. coli (UPEC): Optimization through Iterative Rational Drug Design. J.Med.Chem. 2019 62 467 479 6MAQ 30540910 F9 Pilus Adhesin FmlH Lectin Domain from E. coli UTI89 in Complex with Galactoside 2'-{[(2S,3R,4R,5R,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-5-nitro-[1,1'-biphenyl]-3-carboxylic acid 2018-08-28 2019-09-04 Maddirala, A.R.,Klein, R.,Pinkner, J.S.,Kalas, V.,Hultgren, S.J.,Janetka, J.W. Biphenyl Gal and GalNAc FmlH Lectin Antagonists of Uropathogenic E. coli (UPEC): Optimization through Iterative Rational Drug Design. J.Med.Chem. 2019 62 467 479 6MAW 30540910 F9 Pilus Adhesin FmlH Lectin Domain from E. coli UTI89 in Complex with Galactoside N-[(2S,3R,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-{[S-methyl-6-(trifluoromethyl)-[1,1'-biphenyl]-3'-yl]oxy}oxan-3-yl]acetamide 2018-08-28 2019-09-04 Maddirala, A.R.,Klein, R.,Pinkner, J.S.,Kalas, V.,Hultgren, S.J.,Janetka, J.W. 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Cell Host Microbe 2020 27 428 0 6P0I 32179690 Crystal structure of GDP-bound human RalA in a covalent complex with aryl sulfonyl fluoride compounds. 2019-05-17 2020-03-04 Bum-Erdene, K.,Liu, D.,Gonzalez-Gutierrez, G.,Ghozayel, M.K.,Xu, D.,Meroueh, S.O. Small-molecule covalent bond formation at tyrosine creates a binding site and inhibits activation of Ral GTPases. Proc.Natl.Acad.Sci.USA 2020 117 7131 7139 6P0J 32179690 Crystal structure of GDP-bound human RalA 2019-05-17 2020-03-04 Bum-Erdene, K.,Liu, D.,Gonzalez-Gutierrez, G.,Ghozayel, M.K.,Xu, D.,Meroueh, S.O. Small-molecule covalent bond formation at tyrosine creates a binding site and inhibits activation of Ral GTPases. Proc.Natl.Acad.Sci.USA 2020 117 7131 7139 6P0K 32179690 Crystal structure of GDP-bound human RalA in a covalent complex with aryl sulfonyl fluoride compounds. 2019-05-17 2020-03-04 Bum-Erdene, K.,Liu, D.,Gonzalez-Gutierrez, G.,Ghozayel, M.K.,Xu, D.,Meroueh, S.O. 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A missense variant remote from the active site impairs stability of human phosphoglucomutase 1. J. Inherit. Metab. Dis. 2020 43 861 870 6V74 32144209 Crystal Structure of Human PKM2 in Complex with L-asparagine 2019-12-07 2020-03-18 Nandi, S.,Dey, M. Biochemical and structural insights into how amino acids regulate pyruvate kinase muscle isoform 2. J.Biol.Chem. 2020 295 5390 5403 6V75 32144209 Crystal Structure of Human PKM2 in Complex with L-aspartate 2019-12-07 2020-03-18 Nandi, S.,Dey, M. Biochemical and structural insights into how amino acids regulate pyruvate kinase muscle isoform 2. J.Biol.Chem. 2020 295 5390 5403 6V76 32144209 Crystal Structure of Human PKM2 in Complex with L-valine 2019-12-07 2020-03-18 Nandi, S.,Dey, M. Biochemical and structural insights into how amino acids regulate pyruvate kinase muscle isoform 2. J.Biol.Chem. 2020 295 5390 5403 6VZ9 32159324 Structure of proline utilization A with the FAD covalently modified by L-thiazolidine-2-carboxylate 2020-02-28 2020-03-18 Campbell, A.C.,Becker, D.F.,Gates, K.S.,Tanner, J.J. Covalent Modification of the Flavin in Proline Dehydrogenase by Thiazolidine-2-Carboxylate. Acs Chem.Biol. 2020 15 936 944 6O8K 33106663 Crystal Structure of apo and reduced Sulfide-responsive transcriptional repressor (SqrR) from Rhodobacter capsulatus. 2019-03-11 2020-04-01 Capdevila, D.A.,Walsh, B.J.C.,Zhang, Y.,Dietrich, C.,Gonzalez-Gutierrez, G.,Giedroc, D.P. Structural basis for persulfide-sensing specificity in a transcriptional regulator. Nat.Chem.Biol. 2021 17 65 70 6O8L 33106663 Crystal Structure of C9S apo and reduced Sulfide-responsive transcriptional repressor (SqrR) from Rhodobacter capsulatus. 2019-03-11 2020-04-01 Capdevila, D.A.,Walsh, B.J.C.,Zhang, Y.,Dietrich, C.,Gonzalez-Gutierrez, G.,Giedroc, D.P. Structural basis for persulfide-sensing specificity in a transcriptional regulator. Nat.Chem.Biol. 2021 17 65 70 6O8M 33106663 Crystal Structure of C9S apo Sulfide-responsive transcriptional repressor (SqrR) from Rhodobacter capsulated bound to diamide (tetramethylazodicarboxamide). 2019-03-11 2020-04-01 Capdevila, D.A.,Walsh, B.J.C.,Zhang, Y.,Dietrich, C.,Gonzalez-Gutierrez, G.,Giedroc, D.P. Structural basis for persulfide-sensing specificity in a transcriptional regulator. Nat.Chem.Biol. 2021 17 65 70 6O8N 33106663 Crystal Structure of C9S tetrasulfide state of Sulfide-responsive transcriptional repressor (SqrR) from Rhodobacter capsulatus. 2019-03-11 2020-04-01 Capdevila, D.A.,Walsh, B.J.C.,Zhang, Y.,Dietrich, C.,Gonzalez-Gutierrez, G.,Giedroc, D.P. Structural basis for persulfide-sensing specificity in a transcriptional regulator. Nat.Chem.Biol. 2021 17 65 70 6O8O 33106663 Crystal Structure of C9S disulfide state of Sulfide-responsive transcriptional repressor (SqrR) from Rhodobacter capsulatus. 2019-03-11 2020-04-01 Capdevila, D.A.,Walsh, B.J.C.,Zhang, Y.,Dietrich, C.,Gonzalez-Gutierrez, G.,Giedroc, D.P. Structural basis for persulfide-sensing specificity in a transcriptional regulator. Nat.Chem.Biol. 2021 17 65 70 6VRT LT1009 humanized antibody Fab fragment in complex with calcium 2020-02-09 2020-04-29 Farokhi, E.,Fleming, J.K.,Erasmus, M.F.,Ward, A.D.,Wu, Y.,Gutierrez, M.G.,Wojciak, J.M.,Huxford, T. Ion binding properties of a naturally occurring metalloantibody Antibodies 2020 9 10 0 6VWU 32317293 X-ray structure of ALKS 4230, a fusion of circularly permuted human Interleukin-2 and Interleukin-2 Receptor alpha 2020-02-20 2020-04-29 Lopes, J.E.,Fisher, J.L.,Flick, H.L.,Wang, C.,Sun, L.,Ernstoff, M.S.,Alvarez, J.C.,Losey, H.C. ALKS 4230: a novel engineered IL-2 fusion protein with an improved cellular selectivity profile for cancer immunotherapy. J Immunother Cancer 2020 8 0 0 6W3Q 32454397 APE1 exonuclease substrate complex L104R 2020-03-09 2020-06-10 Whitaker, A.M.,Stark, W.J.,Flynn, T.S.,Freudenthal, B.D. Molecular and structural characterization of disease-associated APE1 polymorphisms. DNA Repair (Amst.) 2020 0 102867 102867 6W3U 32454397 APE1 exonuclease substrate complex R237C 2020-03-09 2020-06-10 Whitaker, A.M.,Stark, W.J.,Flynn, T.S.,Freudenthal, B.D. Molecular and structural characterization of disease-associated APE1 polymorphisms. DNA Repair (Amst.) 2020 0 102867 102867 6USO 32501800 Telomerase Reverse Transcriptase prenucleotide binary complex, TERT:DNA 2019-10-28 2020-06-17 Schaich, M.A.,Sanford, S.L.,Welfer, G.A.,Johnson, S.A.,Khoang, T.H.,Opresko, P.L.,Freudenthal, B.D. Mechanisms of nucleotide selection by telomerase. Elife 2020 9 0 0 6USP 32501800 Telomerase Reverse Transcriptase product complex, TERT:DNA 2019-10-28 2020-06-17 Schaich, M.A.,Sanford, S.L.,Welfer, G.A.,Johnson, S.A.,Khoang, T.H.,Opresko, P.L.,Freudenthal, B.D. Mechanisms of nucleotide selection by telomerase. Elife 2020 9 0 0 6USQ 32501800 Telomerase Reverse Transcriptase binary complex with Y256A mutation, TERT:DNA 2019-10-28 2020-06-17 Schaich, M.A.,Sanford, S.L.,Welfer, G.A.,Johnson, S.A.,Khoang, T.H.,Opresko, P.L.,Freudenthal, B.D. Mechanisms of nucleotide selection by telomerase. Elife 2020 9 0 0 6USR 32501800 Telomerase Reverse Transcriptase ternary complex, TERT:DNA:dGpCpp 2019-10-28 2020-06-17 Schaich, M.A.,Sanford, S.L.,Welfer, G.A.,Johnson, S.A.,Khoang, T.H.,Opresko, P.L.,Freudenthal, B.D. Mechanisms of nucleotide selection by telomerase. Elife 2020 9 0 0 6V9K 32504625 CRYSTAL STRUCTURE OF THE HYBRID C-TERMINAL DOMAIN OF ENZYME I OF THE BACTERIAL PHOSPHOTRANSFERASE SYSTEM FORMED BY HYBRIDIZING THE SCAFFOLD OF THE ESCHERICHIA COLI ENZYME WITH THE ACTIVE SITE LOOPS FROM THE THERMOANAEROBACTER TENGCONGENSIS ENZYME 2019-12-13 2020-06-17 Dotas, R.R.,Nguyen, T.T.,Stewart Jr., C.E.,Ghirlando, R.,Potoyan, D.A.,Venditti, V. Hybrid Thermophilic/Mesophilic Enzymes Reveal a Role for Conformational Disorder in Regulation of Bacterial Enzyme I. J.Mol.Biol. 2020 432 4481 4498 6VBJ 32504625 CRYSTAL STRUCTURE OF THE HYBRID C-TERMINAL DOMAIN OF ENZYME I OF THE BACTERIAL PHOSPHOTRANSFERASE SYSTEM FORMED BY HYBRIDIZING THE SCAFFOLD OF THE THERMOANAEROBACTER TENGCONGENSIS ENZYME WITH THE ACTIVE SITE LOOPS FROM THE ESCHERICHIA COLI ENZYME 2019-12-19 2020-06-17 Dotas, R.R.,Nguyen, T.T.,Stewart Jr., C.E.,Ghirlando, R.,Potoyan, D.A.,Venditti, V. Hybrid Thermophilic/Mesophilic Enzymes Reveal a Role for Conformational Disorder in Regulation of Bacterial Enzyme I. J.Mol.Biol. 2020 432 4481 4498 6W4T 32542366 APE1 Y269A phosphorothioate substrate complex with abasic DNA 2020-03-11 2020-06-17 Hoitsma, N.M.,Whitaker, A.M.,Beckwitt, E.C.,Jang, S.,Agarwal, P.K.,Van Houten, B.,Freudenthal, B.D. AP-endonuclease 1 sculpts DNA through an anchoring tyrosine residue on the DNA intercalating loop. Nucleic Acids Res. 2020 48 7345 7355 6WAE 34023896 Crystal Structure of 6X-His tagged SmcR 2020-03-25 2020-06-17 Newman, J.D.,Russell, M.M.,Fan, L.,Wang, Y.X.,Gonzalez-Gutierrez, G.,van Kessel, J.C. The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences. Nucleic Acids Res. 2021 49 5967 5984 6WAF 34023896 Crystal Structure of SmcR N55I from Vibrio vulnificus 2020-03-25 2020-06-17 Newman, J.D.,Russell, M.M.,Fan, L.,Wang, Y.X.,Gonzalez-Gutierrez, G.,van Kessel, J.C. The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences. Nucleic Acids Res. 2021 49 5967 5984 6WAG 34023896 Crystal Structure of SmcR S76A from Vibrio Vulnificus 2020-03-25 2020-06-17 Newman, J.D.,Russell, M.M.,Fan, L.,Wang, Y.X.,Gonzalez-Gutierrez, G.,van Kessel, J.C. The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences. Nucleic Acids Res. 2021 49 5967 5984 6WAH 34023896 Crystal Structure of SmcR L139R from Vibrio vulnificus 2020-03-25 2020-06-17 Newman, J.D.,Russell, M.M.,Fan, L.,Wang, Y.X.,Gonzalez-Gutierrez, G.,van Kessel, J.C. The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences. Nucleic Acids Res. 2021 49 5967 5984 6WAI 34023896 Crystal Structure of SmcR N142D from Vibrio vulnificus 2020-03-25 2020-06-17 Newman, J.D.,Russell, M.M.,Fan, L.,Wang, Y.X.,Gonzalez-Gutierrez, G.,van Kessel, J.C. The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences. Nucleic Acids Res. 2021 49 5967 5984 6P6P Crystal structure of hemagglutinin from influenza virus A/Sichuan/2/1987 (H3N2) 2019-06-04 2020-07-01 Dai, Y.N.,Fremont, D.H.,Center for Structural Genomics of Infectious Diseases (CSGID) Crystal structure of hemagglutinin from influenza virus A/Sichuan/2/1987 (H3N2) To Be Published 0 0 0 0 6PHI Crystal structure of native glucagon in space group I41 at 1.1 A resolution 2019-06-25 2020-07-01 Mroz, P.A.,Gonzalez-Gutierrez, G.,DiMarchi, R.D. High resolution X-ray structure of glucagon and selected stereo-inversed analogs in novel crystallographic packing arrangement. To Be Published 0 0 0 0 6PHJ Crystal structure of native glucagon in space group P213 at 1.99 A resolution 2019-06-25 2020-07-01 Mroz, P.A.,Gonzalez-Gutierrez, G.,DiMarchi, R.D. High resolution X-ray structure of glucagon and selected stereo-inversed analogs in novel crystallographic packing arrangement. To Be Published 0 0 0 0 6PHK Crystal structure of glucagon analog with mono-stereoinversion at position 21 (D-Asp21) in space group I41 at 1.18 A resolution 2019-06-25 2020-07-01 Mroz, P.A.,Gonzalez-Gutierrez, G.,DiMarchi, R.D. High resolution X-ray structure of glucagon and selected stereo-inversed analogs in novel crystallographic packing arrangement. To Be Published 0 0 0 0 6PHL Crystal structure of glucagon analog with mono-stereoinversion at position 23 (D-Val23) in space group I41 at 1.44 A resolution 2019-06-25 2020-07-01 Mroz, P.A.,Gonzalez-Gutierrez, G.,DiMarchi, R.D. High resolution X-ray structure of glucagon and selected stereo-inversed analogs in novel crystallographic packing arrangement. To Be Published 0 0 0 0 6PHM Crystal structure of glucagon analog fully composed of D-amino acids in space group I41 at 1.1 A resolution 2019-06-25 2020-07-01 Mroz, P.A.,Gonzalez-Gutierrez, G.,DiMarchi, R.D. High resolution X-ray structure of glucagon and selected stereo-inversed analogs in novel crystallographic packing arrangement. To Be Published 0 0 0 0 6PHN Crystal structure of glucagon analog composed of D-amino acids with mono-stereoinversion at position 23 (L-Val23) in space group I41 at 1.33 A resolution 2019-06-25 2020-07-01 Mroz, P.A.,Gonzalez-Gutierrez, G.,DiMarchi, R.D. High resolution X-ray structure of glucagon and selected stereo-inversed analogs in novel crystallographic packing arrangement. To Be Published 0 0 0 0 6PHO Crystal structure of glucagon analog with selenomethionine substitutions at position 1 and 27 in space group I41 at 1.42 A resolution 2019-06-25 2020-07-01 Mroz, P.A.,Gonzalez-Gutierrez, G.,DiMarchi, R.D. High resolution X-ray structure of glucagon and selected stereo-inversed analogs in novel crystallographic packing arrangement. To Be Published 0 0 0 0 6PHP Crystal structure of glucagon analog with 4-bromo-phenylalanine substitutions at position 6 and 22 in space group I41 at 1.65 A resolution 2019-06-25 2020-07-01 Mroz, P.A.,Gonzalez-Gutierrez, G.,DiMarchi, R.D. High resolution X-ray structure of glucagon and selected stereo-inversed analogs in novel crystallographic packing arrangement. To Be Published 0 0 0 0 6PHQ Crystal structure of glucagon analog fully composed of D-amino acids with 4-bromo-D-phenylalanine substitutions at position 6 and 22 in space group I41 at 1.1 A resolution 2019-06-25 2020-07-01 Mroz, P.A.,Gonzalez-Gutierrez, G.,DiMarchi, R.D. High resolution X-ray structure of glucagon and selected stereo-inversed analogs in novel crystallographic packing arrangement. To Be Published 0 0 0 0 6PMT Structure of Mortalin-NBD with adenosine-5'-monophosphate and thiodiphosphate 2019-07-02 2020-07-08 Moseng, M.A.,Nix, J.C.,Page, R.C. Structure of the mortalin nucleotide binding domain in complex with adenosine monophosphate to be published 0 0 0 0 6VWF 32717224 Structure of ALDH9A1 complexed with NAD+ in space group C222 2020-02-19 2020-08-05 Wyatt, J.W.,Korasick, D.A.,Qureshi, I.A.,Campbell, A.C.,Gates, K.S.,Tanner, J.J. Inhibition, crystal structures, and in-solution oligomeric structure of aldehyde dehydrogenase 9A1. Arch.Biochem.Biophys. 2020 691 108477 108477 6WW4 32726574 Crystal structure of HERC2 ZZ domain in complex with histone H3 tail 2020-05-07 2020-08-05 Liu, J.,Xue, Z.,Zhang, Y.,Vann, K.R.,Shi, X.,Kutateladze, T.G. Structural Insight into Binding of the ZZ Domain of HERC2 to Histone H3 and SUMO1. Structure 2020 28 1225 0 6X0I 32723870 Structure of oxidized SidA ornithine hydroxylase with the FAD ""in"" and complexed with NADP 2020-05-15 2020-08-05 Campbell, A.C.,Stiers, K.M.,Martin Del Campo, J.S.,Mehra-Chaudhary, R.,Sobrado, P.,Tanner, J.J. Trapping conformational states of a flavin-dependent N -monooxygenase in crystallo reveals protein and flavin dynamics. J.Biol.Chem. 2020 295 13239 13249 6UIQ 30122451 Crystal structure of wild-type human phosphoglucomutase 1 in complex with Glucose-6-Phosphate 2019-10-01 2020-08-12 Stiers, K.M.,Beamer, L.J. A Hotspot for Disease-Associated Variants of Human PGM1 Is Associated with Impaired Ligand Binding and Loop Dynamics. Structure 2018 26 1337 0 6VAT 33082366 Structure of the periplasmic domain of YejM from Salmonella typhimurium 2019-12-17 2020-08-26 Gabale, U.,Pena Palomino, P.A.,Kim, H.,Chen, W.,Ressl, S. The essential inner membrane protein YejM is a metalloenzyme. 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Rna 2020 26 1767 1776 7JFR 33288628 Auristatin bound to tubulin 2020-07-17 2020-09-16 Moquist, P.N.,Bovee, T.D.,Waight, A.B.,Mitchell, J.A.,Miyamoto, J.B.,Mason, M.L.,Emmerton, K.K.,Stevens, N.,Balasubramanian, C.,Simmons, J.K.,Lyon, R.P.,Senter, P.D.,Doronina, S.O. Novel Auristatins with High Bystander and Cytotoxic Activities in Drug Efflux-positive Tumor Models. Mol.Cancer Ther. 2021 20 320 328 6W9W R80A PCNA mutant defective in BIR 2020-03-23 2020-09-23 Ripley, B.M.,Washington, M.T. Structural analysis of PCNA mutant proteins defective in BIR, FF248-249AA and R80A To be Published 0 0 0 0 7JX6 STRUCTURE OF THE SARS-CoV-2 ORF8 ENCODED ACCESSORY PROTEIN 2020-08-26 2020-09-23 Nelson, C.A.,Hall, P.D.,Fremont, D.H. Crystal Structure of the SARS-CoV-2 ORF8 Protein To Be Published 0 0 0 0 6WAC FF248-249AA PCNA mutant defective in BIR 2020-03-25 2020-09-30 Ripley, B.M.,Washington, M.T. 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Acta Crystallogr D Struct Biol 2022 78 792 802 7SPD 35647925 Crystal Structure of The Tetramerization Domain (29-147) From Human Voltage-gated Potassium Channel Kv2.1 in C 2 2 21 Space Group 2021-11-02 2022-06-08 Xu, Z.,Khan, S.,Schnicker, N.J.,Baker, S. Pentameric assembly of the Kv2.1 tetramerization domain. Acta Crystallogr D Struct Biol 2022 78 792 802 8D3F 35831295 Crystal structure of human STAT1 in complex with the repeat region from Toxoplasma protein TgIST 2022-06-01 2022-07-06 Huang, Z.,Liu, H.,Nix, J.,Xu, R.,Knoverek, C.R.,Bowman, G.R.,Amarasinghe, G.K.,Sibley, L.D. The intrinsically disordered protein TgIST from Toxoplasma gondii inhibits STAT1 signaling by blocking cofactor recruitment. Nat Commun 2022 13 4047 4047 7RHM 36190128 Structure of Q67H/N74D mutant of disulfide stabilized HIV-1 CA hexamer 2021-07-17 2022-07-27 Bester, S.M.,Adu-Ampratwum, D.,Annamalai, A.S.,Wei, G.,Briganti, L.,Murphy, B.C.,Haney, R.,Fuchs, J.R.,Kvaratskhelia, M. Structural and Mechanistic Bases of Viral Resistance to HIV-1 Capsid Inhibitor Lenacapavir. Mbio 2022 13 0 0 7RHN 36190128 Co-crystal structure of Q67H mutant of disulfide stabilized HIV-1 CA hexamer and lenacapavir 2021-07-17 2022-07-27 Bester, S.M.,Adu-Ampratwum, D.,Annamalai, A.S.,Wei, G.,Briganti, L.,Murphy, B.C.,Haney, R.,Fuchs, J.R.,Kvaratskhelia, M. Structural and Mechanistic Bases of Viral Resistance to HIV-1 Capsid Inhibitor Lenacapavir. Mbio 2022 13 0 0 7RJ2 36190128 Co-crystal structure of lenacapavir bound to Q67H/N74D mutant of disulfide stabilized HIV-1 CA hexamer 2021-07-20 2022-07-27 Bester, S.M.,Adu-Ampratwum, D.,Annamalai, A.S.,Wei, G.,Briganti, L.,Murphy, B.C.,Haney, R.,Fuchs, J.R.,Kvaratskhelia, M. Structural and Mechanistic Bases of Viral Resistance to HIV-1 Capsid Inhibitor Lenacapavir. Mbio 2022 13 0 0 7RJ4 36190128 Co-crystal structure of lenacapavir bound to N74D mutant of disulfide stabilized HIV-1 CA hexamer 2021-07-20 2022-07-27 Bester, S.M.,Adu-Ampratwum, D.,Annamalai, A.S.,Wei, G.,Briganti, L.,Murphy, B.C.,Haney, R.,Fuchs, J.R.,Kvaratskhelia, M. Structural and Mechanistic Bases of Viral Resistance to HIV-1 Capsid Inhibitor Lenacapavir. Mbio 2022 13 0 0 7RMJ 36190128 Disulfide stabilized HIV-1 CA hexamer in complex with capsid inhibitor (S)-N-(1-(3-(4-chloro-3-(methylsulfonamido)-1-(2,2,2-trifluoroethyl)-1H-indazol-7-yl)-6-(3-methyl-3-(methylsulfonyl)but-1-yn-1-yl)pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl)-2-(3-(trifluoromethyl)-4,5,6,7-tetrahydro-1H-indazol-1-yl)acetamide 2021-07-27 2022-08-03 Bester, S.M.,Adu-Ampratwum, D.,Annamalai, A.S.,Wei, G.,Briganti, L.,Murphy, B.C.,Haney, R.,Fuchs, J.R.,Kvaratskhelia, M. Structural and Mechanistic Bases of Viral Resistance to HIV-1 Capsid Inhibitor Lenacapavir. Mbio 2022 13 0 0 7RMM 36190128 Structure of N74D mutant of disulfide stabilized HIV-1 CA hexamer 2021-07-27 2022-08-03 Bester, S.M.,Adu-Ampratwum, D.,Annamalai, A.S.,Wei, G.,Briganti, L.,Murphy, B.C.,Haney, R.,Fuchs, J.R.,Kvaratskhelia, M. Structural and Mechanistic Bases of Viral Resistance to HIV-1 Capsid Inhibitor Lenacapavir. Mbio 2022 13 0 0 7S9N 35499923 Binary complex of DNA Polymerase Beta with Fapy-dG in the template position 2021-09-21 2022-08-03 Ryan, B.J.,Yang, H.,Bacurio, J.H.T.,Smith, M.R.,Basu, A.K.,Greenberg, M.M.,Freudenthal, B.D. Structural Dynamics of a Common Mutagenic Oxidative DNA Lesion in Duplex DNA and during DNA Replication. J.Am.Chem.Soc. 2022 144 8054 8065 7UHE 35676274 Taf14 ET domain in complex with C-terminal tail of Taf2 2022-03-26 2022-08-17 Klein, B.J.,Feigerle, J.T.,Zhang, J.,Ebmeier, C.C.,Fan, L.,Singh, R.K.,Wang, W.W.,Schmitt, L.R.,Lee, T.,Hansen, K.C.,Liu, W.R.,Wang, Y.X.,Strahl, B.D.,Anthony Weil, P.,Kutateladze, T.G. Taf2 mediates DNA binding of Taf14. Nat Commun 2022 13 3177 3177 7SJ5 35820453 Bacteriophage lambda major capsid protein mutant - W308A 2021-10-15 2022-08-24 Davis, C.R.,Backos, D.,Morais, M.C.,Churchill, M.E.A.,Catalano, C.E. Characterization of a Primordial Major Capsid-Scaffolding Protein Complex in Icosahedral Virus Shell Assembly. J.Mol.Biol. 2022 434 167719 167719 7TE2 35630357 Crystal Structure of AerR from Rhodobacter capsulatus at 2.25 A. 2022-01-04 2022-08-31 Dragnea, V.,Gonzalez-Gutierrez, G.,Bauer, C.E. Structural Analyses of CrtJ and Its B 12 -Binding Co-Regulators SAerR and LAerR from the Purple Photosynthetic Bacterium Rhodobacter capsulatus. Microorganisms 2022 10 0 0 7UOF 35978488 Dihydroorotase from M. jannaschii 2022-04-12 2022-08-31 Vitali, J.,Nix, J.C.,Newman, H.E.,Colaneri, M.J. Crystal structure of Methanococcus jannaschii dihydroorotase. Proteins 2023 91 91 98 7SNQ 36202818 Hexamer HIV-1 CA in complex with CPSF6 peptide and IP6 ligand 2021-10-28 2022-09-07 Wei, G.,Iqbal, N.,Courouble, V.V.,Francis, A.C.,Singh, P.K.,Hudait, A.,Annamalai, A.S.,Bester, S.,Huang, S.W.,Shkriabai, N.,Briganti, L.,Haney, R.,KewalRamani, V.N.,Voth, G.A.,Engelman, A.N.,Melikyan, G.B.,Griffin, P.R.,Asturias, F.,Kvaratskhelia, M. Prion-like low complexity regions enable avid virus-host interactions during HIV-1 infection. Nat Commun 2022 13 5879 5879 7RAR 36190128 Structure of Q67H mutant of disulfide stabilized HIV-1 CA hexamer 2021-07-02 2022-09-28 Bester, S.M.,Adu-Ampratwum, D.,Annamalai, A.S.,Wei, G.,Briganti, L.,Murphy, B.C.,Haney, R.,Fuchs, J.R.,Kvaratskhelia, M. Structural and Mechanistic Bases of Viral Resistance to HIV-1 Capsid Inhibitor Lenacapavir. Mbio 2022 13 0 0 7SNL Disulfide stabilized HIV-1 CA hexamer in complex with capsid inhibitor N-(1-(3-(4-chloro-1-methyl-3-(methylsulfonamido)-1H-indazol-7-yl)-4-oxo-3,4-dihydropyrido[2,3-d]pyrimidin-2-yl)-2-(3,5-difluorophenyl)ethyl)-2-(3-(trifluoromethyl)-4,5,6,7-tetrahydro-1H-indazol-1-yl)acetamide 2021-10-28 2022-10-05 Adu-Ampratwum, D.,Haney, R.,Bester, S.M.,Annamalai, A.S.,Wei, G.,Fuchs, J.R.,Kvaratskhelia, M. Disulfide stabilized HIV-1 CA hexamer in complex with capsid inhibitor N-(1-(3-(4-chloro-1-methyl-3-(methylsulfonamido)-1H-indazol-7-yl)-4-oxo-3,4-dihydropyrido[2,3-d]pyrimidin-2-yl)-2-(3,5-difluorophenyl)ethyl)-2-(3-(trifluoromethyl)-4,5,6,7-tetrahydro-1H-indazol-1-yl)acetamide To Be Published 0 0 0 0 7SNN Disulfide stabilized HIV-1 CA hexamer in complex with capsid inhibitor N-(1-(3-(4-chloro-1-methyl-3-(methylsulfonamido)-1H-indazol-7-yl)-4-oxo-3,4-dihydropyrido[2,3-d]pyrimidin-2-yl)-2-(3,5-difluorophenyl)ethyl)-2-(3-(difluoromethyl)-5,6-dihydrocyclopenta[c]pyrazol-1(4H)-yl)acetamide 2021-10-28 2022-10-05 Adu-Ampratwum, D.,Haney, R.,Bester, S.M.,Annamalai, A.S.,Wei, G.,Fuchs, J.R.,Kvaratskhelia, M. Disulfide stabilized HIV-1 CA hexamer in complex with capsid inhibitor N-(1-(3-(4-chloro-1-methyl-3-(methylsulfonamido)-1H-indazol-7-yl)-4-oxo-3,4-dihydropyrido[2,3-d]pyrimidin-2-yl)-2-(3,5-difluorophenyl)ethyl)-2-(3-(difluoromethyl)-5,6-dihydrocyclopenta[c]pyrazol-1(4H)-yl)acetamide To Be Published 0 0 0 0 7RAO Structure of M66I mutant of disulfide stabilized HIV-1 CA hexamer 2021-07-02 2022-11-02 Bester, S.M.,Annamalai, A.S.,Adu-Ampratwum, D.,Haney, R.,Fuchs, J.R.,Kvaratskhelia, M. Structural and mechanistic bases of viral resistance to long-acting HIV-1 capsid inhibitor, Lenacapavir To Be Published 0 0 0 0 7VXO Structure of the C-terminal head domain of the Fowl Adenovirus serotype 4 (FAdV-4) fibre-2 protein 2021-11-13 2022-11-16 Song, Y.P.,Wei, Q. Structure of the C-terminal head domain of the Fowl Adenovirus serotype 4 (FAdV-4) fibre-2 protein To Be Published 0 0 0 0 7V0F 36442121 Structure of 6-carboxy-5,6,7,8-tetrahydropterin synthase paralog QueD2 from Acinetobacter baumannii 2022-05-10 2022-12-07 Jordan, M.R.,Gonzalez-Gutierrez, G.,Trinidad, J.C.,Giedroc, D.P. Metal retention and replacement in QueD2 protect queuosine-tRNA biosynthesis in metal-starved Acinetobacter baumannii. Proc.Natl.Acad.Sci.USA 2022 119 0 0 7TXK 36481738 Crystal structure of EgtU solute binding domain from Streptococcus pneumoniae D39 in complex with L-ergothioneine 2022-02-09 2022-12-21 Zhang, Y.,Gonzalez-Gutierrez, G.,Legg, K.A.,Walsh, B.J.C.,Pis Diez, C.M.,Edmonds, K.A.,Giedroc, D.P. Discovery and structure of a widespread bacterial ABC transporter specific for ergothioneine. Nat Commun 2022 13 7586 7586 7TXL 36481738 Crystal structure of EgtU solute binding domain from Streptococcus pneumoniae D39 in complex with L-ergothioneine 2022-02-09 2022-12-21 Zhang, Y.,Gonzalez-Gutierrez, G.,Legg, K.A.,Walsh, B.J.C.,Pis Diez, C.M.,Edmonds, K.A.,Giedroc, D.P. Discovery and structure of a widespread bacterial ABC transporter specific for ergothioneine. Nat Commun 2022 13 7586 7586 8DKD Sliding clamp from M. thermoresistibile 2022-07-05 2023-01-18 Kapur, M.K.,Gray, O.J.,Honzatko, R.H.,Nelson, S.N. Interaction of sliding clamp with mycobacterial polymerases To Be Published 0 0 0 0 8DEZ 36652481 Abp2D Receptor Binding Domain ACICU 2022-06-21 2023-03-01 Tamadonfar, K.O.,Di Venanzio, G.,Pinkner, J.S.,Dodson, K.W.,Kalas, V.,Zimmerman, M.I.,Bazan Villicana, J.,Bowman, G.R.,Feldman, M.F.,Hultgren, S.J. Structure-function correlates of fibrinogen binding by Acinetobacter adhesins critical in catheter-associated urinary tract infections. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8DF0 36652481 Abp1D receptor binding domain 2022-06-21 2023-03-01 Tamadonfar, K.O.,Di Venanzio, G.,Pinkner, J.S.,Dodson, K.W.,Kalas, V.,Zimmerman, M.I.,Bazan Villicana, J.,Bowman, G.R.,Feldman, M.F.,Hultgren, S.J. Structure-function correlates of fibrinogen binding by Acinetobacter adhesins critical in catheter-associated urinary tract infections. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8DKA 36652481 Abp2D receptor binding domain R86E 2022-07-05 2023-03-01 Tamadonfar, K.O.,Di Venanzio, G.,Pinkner, J.S.,Dodson, K.W.,Kalas, V.,Zimmerman, M.I.,Bazan Villicana, J.,Bowman, G.R.,Feldman, M.F.,Hultgren, S.J. Structure-function correlates of fibrinogen binding by Acinetobacter adhesins critical in catheter-associated urinary tract infections. Proc.Natl.Acad.Sci.USA 2023 120 0 0 7U6K 37407546 Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence. 2022-03-04 2023-03-29 Orun, A.R.,Shields, E.T.,Dmytriw, S.,Vajapayajula, A.,Slaughter, C.K.,Snow, C.D. Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds. Acs Nano 2023 17 13110 13120 7U7O 37407546 Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional T-A rich sequence. 2022-03-07 2023-03-29 Orun, A.R.,Shields, E.T.,Dmytriw, S.,Vajapayajula, A.,Slaughter, C.K.,Snow, C.D. Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds. Acs Nano 2023 17 13110 13120 7UFX 37407546 Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and scaffold-insert duplexes (21mer and 10mer) containing the cognate REPE54 sequence and an additional G-C rich sequence, respectively. 2022-03-23 2023-03-29 Orun, A.R.,Shields, E.T.,Dmytriw, S.,Vajapayajula, A.,Slaughter, C.K.,Snow, C.D. Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds. Acs Nano 2023 17 13110 13120 7UJ5 Crystal structure of glutamate racemase from Helicobacter pylori in complex with D-glutamate 2022-03-30 2023-04-05 Cooling, G.T.,Spies, M.A. Crystal structure of glutamate racemase from Helicobacter pylori in complex with D-glutamate To Be Published 0 0 0 0 7UJI 37811683 Structure of the P130R single variant of serine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP 2022-03-30 2023-04-12 Korasick, D.A.,Owuocha, L.F.,Kandoth, P.K.,Tanner, J.J.,Mitchum, M.G.,Beamer, L.J. Structural and functional analysis of two SHMT8 variants associated with soybean cyst nematode resistance. Febs J. 2024 291 323 337 7UOG 37407546 Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and asymmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence. 2022-04-12 2023-04-19 Orun, A.R.,Shields, E.T.,Dmytriw, S.,Vajapayajula, A.,Slaughter, C.K.,Snow, C.D. Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds. Acs Nano 2023 17 13110 13120 7UR0 37407546 Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and scaffold-insert duplexes (21mer and 10mer) containing the cognate REPE54 sequence and an additional T-A rich sequence, respectively. 2022-04-20 2023-04-26 Orun, A.R.,Shields, E.T.,Dmytriw, S.,Vajapayajula, A.,Slaughter, C.K.,Snow, C.D. Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds. Acs Nano 2023 17 13110 13120 7URL The crystal structure of anti-HIV_scFv 2022-04-22 2023-04-26 Zhao, N.,Stasevich, T.,Chen, S.H.,Snow, C.D. anti-HIV protease intracellular antibody scFv To Be Published 0 0 0 0 7UV6 Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and scaffold duplex (21mer) containing the cognate REPE54 sequence and an insert duplex (10mer) with guest TAMRA-labelled thymine and G-C rich sequence. 2022-04-29 2023-05-03 Orun, A.R.,Shields, E.T.,Dmytriw, S.,Vajapayajula, A.,Slaughter, C.K.,Snow, C.D. Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds Acs Nano 2023 17 13110 13120 8FDX 37200803 AGF271 and GAR in complex with human recombinant GARFTase, ligase, purine biosynthesis, transfers formyl group from 10-formyl tetrahydrofolate to glycinamide ribonucleotide (GAR) to form tetrahydrofolate and formyl GAR 2022-12-05 2023-05-10 Tong, N.,Wong-Roushar, J.,Wallace-Povirk, A.,Shah, Y.,Nyman, M.C.,Katinas, J.M.,Schneider, M.,O'Connor, C.,Bao, X.,Kim, S.,Li, J.,Hou, Z.,Matherly, L.H.,Dann 3rd, C.E.,Gangjee, A. Multitargeted 6-Substituted Thieno[2,3- d ]pyrimidines as Folate Receptor-Selective Anticancer Agents that Inhibit Cytosolic and Mitochondrial One-Carbon Metabolism. Acs Pharmacol Transl Sci 2023 6 748 770 8FDY 37200803 Human GAR transformylase in complex with GAR substrate and AGF132 inhibitor 2022-12-05 2023-05-10 Tong, N.,Wong-Roushar, J.,Wallace-Povirk, A.,Shah, Y.,Nyman, M.C.,Katinas, J.M.,Schneider, M.,O'Connor, C.,Bao, X.,Kim, S.,Li, J.,Hou, Z.,Matherly, L.H.,Dann 3rd, C.E.,Gangjee, A. Multitargeted 6-Substituted Thieno[2,3- d ]pyrimidines as Folate Receptor-Selective Anticancer Agents that Inhibit Cytosolic and Mitochondrial One-Carbon Metabolism. Acs Pharmacol Transl Sci 2023 6 748 770 8FDZ 37200803 Human GAR transformylase in complex with GAR substrate and AGF302 inhibitor 2022-12-05 2023-05-10 Tong, N.,Wong-Roushar, J.,Wallace-Povirk, A.,Shah, Y.,Nyman, M.C.,Katinas, J.M.,Schneider, M.,O'Connor, C.,Bao, X.,Kim, S.,Li, J.,Hou, Z.,Matherly, L.H.,Dann 3rd, C.E.,Gangjee, A. Multitargeted 6-Substituted Thieno[2,3- d ]pyrimidines as Folate Receptor-Selective Anticancer Agents that Inhibit Cytosolic and Mitochondrial One-Carbon Metabolism. Acs Pharmacol Transl Sci 2023 6 748 770 8FE0 37200803 Human GAR transformylase in complex with GAR substrate and AGF305 inhibitor 2022-12-05 2023-05-10 Tong, N.,Wong-Roushar, J.,Wallace-Povirk, A.,Shah, Y.,Nyman, M.C.,Katinas, J.M.,Schneider, M.,O'Connor, C.,Bao, X.,Kim, S.,Li, J.,Hou, Z.,Matherly, L.H.,Dann 3rd, C.E.,Gangjee, A. Multitargeted 6-Substituted Thieno[2,3- d ]pyrimidines as Folate Receptor-Selective Anticancer Agents that Inhibit Cytosolic and Mitochondrial One-Carbon Metabolism. Acs Pharmacol Transl Sci 2023 6 748 770 7UV7 Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and scaffold duplex (21mer) containing the cognate REPE54 sequence and an insert duplex (10mer) with guest TAMRA-labelled thymine and T-A rich sequence. 2022-04-29 2023-05-17 Orun, A.R.,Shields, E.T.,Dmytriw, S.,Vajapayajula, A.,Slaughter, C.K.,Snow, C.D. Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds Acs Nano 2023 17 13110 13120 7UXY 37407546 Isoreticular, interpenetrating co-crystal of protein variant Replication Initiator Protein REPE54 (L53G,Q54G,E55G) and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence. 2022-05-06 2023-05-17 Orun, A.R.,Shields, E.T.,Dmytriw, S.,Vajapayajula, A.,Slaughter, C.K.,Snow, C.D. Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds. Acs Nano 2023 17 13110 13120 7T2J 36562717 Crystal Structure of TEAD2 in a covalent complex with TED-642 2021-12-05 2023-06-14 Bum-Erdene, K.,Yeh, I.J.,Gonzalez-Gutierrez, G.,Ghozayel, M.K.,Pollok, K.,Meroueh, S.O. Small-Molecule Cyanamide Pan-TEAD·YAP1 Covalent Antagonists. J.Med.Chem. 2023 66 266 284 7T2K 36562717 Crystal Structure of TEAD2 in a covalent complex with TED-661 2021-12-05 2023-06-14 Bum-Erdene, K.,Yeh, I.J.,Gonzalez-Gutierrez, G.,Ghozayel, M.K.,Pollok, K.,Meroueh, S.O. Small-Molecule Cyanamide Pan-TEAD·YAP1 Covalent Antagonists. J.Med.Chem. 2023 66 266 284 7T2L 36562717 Crystal Structure of TEAD2 in a covalent complex with TED-662 2021-12-05 2023-06-14 Bum-Erdene, K.,Yeh, I.J.,Gonzalez-Gutierrez, G.,Ghozayel, M.K.,Pollok, K.,Meroueh, S.O. Small-Molecule Cyanamide Pan-TEAD·YAP1 Covalent Antagonists. J.Med.Chem. 2023 66 266 284 7T2M 36562717 Crystal Structure of TEAD2 in a covalent complex with TED-664 2021-12-05 2023-06-14 Bum-Erdene, K.,Yeh, I.J.,Gonzalez-Gutierrez, G.,Ghozayel, M.K.,Pollok, K.,Meroueh, S.O. Small-Molecule Cyanamide Pan-TEAD·YAP1 Covalent Antagonists. J.Med.Chem. 2023 66 266 284 8D86 37407546 Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence co-crystallized with a guest small molecule, netropsin. 2022-06-07 2023-06-28 Orun, A.R.,Shields, E.T.,Dmytriw, S.,Vajapayajula, A.,Slaughter, C.K.,Snow, C.D. Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds. Acs Nano 2023 17 13110 13120 8D8M Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence grown in a calcium chloride crystallization solution. 2022-06-08 2023-06-28 Orun, A.R.,Shields, E.T.,Dmytriw, S.,Vajapayajula, A.,Snow, C.D. Designed crystalline assemblies of protein and DNA enable site-specific installation of a guest protein, DNA, and small molecule. To Be Published 0 0 0 0 8DJ3 37005499 Caspase-7 bound to novel allosteric inhibitor 2022-06-29 2023-07-05 Hobbs, K.F.,Propp, J.,Vance, N.R.,Kalenkiewicz, A.,Witkin, K.R.,Ashley Spies, M. Allosteric Tuning of Caspase-7: Establishing the Nexus of Structure and Catalytic Power. Chemistry 2023 29 0 0 8F7N 37213073 Crystal structure of chemoreceptor McpZ ligand sensing domain 2022-11-19 2023-07-05 Salar, S.,Ball, N.E.,Baaziz, H.,Nix, J.C.,Sobe, R.C.,Compton, K.K.,Zhulin, I.B.,Brown, A.M.,Scharf, B.E.,Schubot, F.D. The structural analysis of the periplasmic domain of Sinorhizobium meliloti chemoreceptor McpZ reveals a novel fold and suggests a complex mechanism of transmembrane signaling. Proteins 2023 91 1394 1406 7UMO 37453421 Structure of Unc119-inhibitor complex. 2022-04-07 2023-07-26 Yin, T.C.,Van Vranken, J.G.,Srivastava, D.,Mittal, A.,Buscaglia, P.,Moore, A.E.,Verdinez, J.A.,Graham, A.E.,Walsh, S.A.,Acevedo, M.A.,Kerns, R.J.,Artemyev, N.O.,Gygi, S.P.,Sebag, J.A. Insulin sensitization by small molecules enhancing GLUT4 translocation. Cell Chem Biol 2023 30 933 0 8TIP Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with blunt ends and 5' terminal phosphates. 2023-07-20 2023-08-02 Orun, A.R.,Vajapayajula, A.,Dmytriw, S.,Shields, E.T.,Slaughter, C.K.,Shrestha, R.,Snow, C.D. Tuning chemical DNA ligation within DNA crystals and co-crystals. To Be Published 0 0 0 0 8TIQ Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with blunt ends and 3' terminal phosphates. 2023-07-20 2023-08-02 Orun, A.R.,Vajapayajula, A.,Dmytriw, S.,Shields, E.T.,Shrestha, R.,Snow, C.D. Tuning chemical DNA ligation within DNA crystals and protein-DNA co-crystals To Be Published 0 0 0 0 8TIR Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with 1 sticky bases and 5' terminal phosphates. 2023-07-20 2023-08-02 Orun, A.R.,Vajapayajula, A.,Dmytriw, S.,Shields, E.T.,Slaughter, C.K.,Shrestha, R.,Snow, C.D. Tuning chemical DNA ligation within DNA crystals and co-crystals. To Be Published 0 0 0 0 8TIS Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with 1 sticky bases and 3' terminal phosphates. 2023-07-20 2023-08-02 Orun, A.R.,Vajapayajula, A.,Dmytriw, S.,Shields, E.T.,Slaughter, C.K.,Shrestha, R.,Snow, C.D. Tuning chemical DNA ligation within DNA crystals and co-crystals. To Be Published 0 0 0 0 8TIT Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with 2 sticky base overhangs and no terminal phosphates. 2023-07-20 2023-08-02 Orun, A.R.,Vajapayajula, A.,Dmytriw, S.,Shields, E.T.,Slaughter, C.K.,Shrestha, R.,Snow, C.D. Tuning chemical DNA ligation within DNA crystals and co-crystals. To Be Published 0 0 0 0 8TIU Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with 2 sticky base overhangs and 3' terminal phosphates. 2023-07-20 2023-08-02 Orun, A.R.,Vajapayajula, A.,Dmytriw, S.,Shields, E.T.,Slaughter, C.K.,Shrestha, R.,Snow, C.D. Tuning chemical DNA ligation within DNA crystals and co-crystals. To Be Published 0 0 0 0 8TIV Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with blunt ends and 5' terminal phosphates and crosslinked with EDC. 2023-07-20 2023-08-02 Orun, A.R.,Vajapayajula, A.,Dmytriw, S.,Shields, E.T.,Slaughter, C.K.,Shrestha, R.,Snow, C.D. Tuning chemical DNA ligation within DNA crystals and co-crystals. To Be Published 0 0 0 0 8TIW Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with blunt ends and 3' terminal phosphates and crosslinked with EDC. 2023-07-20 2023-08-02 Orun, A.R.,Vajapayajula, A.,Dmytriw, S.,Shields, E.T.,Slaughter, C.K.,Shrestha, R.,Snow, C.D. Tuning chemical DNA ligation within DNA crystals and co-crystals. To Be Published 0 0 0 0 8TIX Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with 1 sticky bases and 5' terminal phosphates and crosslinked with EDC. 2023-07-20 2023-08-02 Orun, A.R.,Vajapayajula, A.,Dmytriw, S.,Shields, E.T.,Slaughter, C.K.,Shrestha, R.,Snow, C.D. Tuning chemical DNA ligation within DNA crystals and co-crystals. To Be Published 0 0 0 0 8TIY Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with 1 sticky bases and 3' terminal phosphates and crosslinked with EDC. 2023-07-20 2023-08-02 Orun, A.R.,Vajapayajula, A.,Dmytriw, S.,Shields, E.T.,Slaughter, C.K.,Shrestha, R.,Snow, C.D. Tuning chemical DNA ligation within DNA crystals and co-crystals. To Be Published 0 0 0 0 8TIZ Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with 2 sticky base overhangs and no terminal phosphates and crosslinked with EDC. 2023-07-20 2023-08-02 Orun, A.R.,Vajapayajula, A.,Dmytriw, S.,Shields, E.T.,Slaughter, C.K.,Shrestha, R.,Snow, C.D. Tuning chemical DNA ligation within DNA crystals and co-crystals. To Be Published 0 0 0 0 8TJ0 Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with 2 sticky base overhangs and 5' terminal phosphates and crosslinked with EDC. 2023-07-20 2023-08-02 Orun, A.R.,Vajapayajula, A.,Dmytriw, S.,Shields, E.T.,Slaughter, C.K.,Shrestha, R.,Snow, C.D. Tuning chemical DNA ligation within DNA crystals and co-crystals. To Be Published 0 0 0 0 8TJ1 Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with 2 sticky base overhangs and 3' terminal phosphates and crosslinked with EDC. 2023-07-20 2023-08-02 Orun, A.R.,Vajapayajula, A.,Dmytriw, S.,Shields, E.T.,Slaughter, C.K.,Shrestha, R.,Snow, C.D. Tuning chemical DNA ligation within DNA crystals and co-crystals. To Be Published 0 0 0 0 8F0V 37384723 Lipocalin-like Milk protein-2 - E38A mutant 2022-11-04 2023-08-23 Santhakumari, P.R.,Dhanabalan, K.,Virani, S.,Hopf-Jannasch, A.S.,Benoit, J.B.,Chopra, G.,Subramanian, R. Variability in phenylalanine side chain conformations facilitates broad substrate tolerance of fatty acid binding in cockroach milk proteins. Plos One 2023 18 0 0 8T8K 37596303 Structure of Domain of Unknown Function 507 (DUF507) in Space Group C222(1) 2023-06-22 2023-08-30 McKay, C.E.,Cheng, J.,Tanner, J.J. Crystal structure of domain of unknown function 507 (DUF507) reveals a new protein fold. Sci Rep 2023 13 13496 13496 8T8L 37596303 Structure of Domain of Unknown Function 507 (DUF507) in Space Group P3(2)21 2023-06-22 2023-08-30 McKay, C.E.,Cheng, J.,Tanner, J.J. Crystal structure of domain of unknown function 507 (DUF507) reveals a new protein fold. Sci Rep 2023 13 13496 13496 8T8L 37596303 Structure of Domain of Unknown Function 507 (DUF507) in Space Group P3(2)21 2023-06-22 2023-08-30 McKay, C.E.,Cheng, J.,Tanner, J.J. Crystal structure of domain of unknown function 507 (DUF507) reveals a new protein fold. Sci Rep 2023 13 13496 13496 8FJT 37582241 Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF362 inhibitor 2022-12-20 2023-09-06 Nayeen, M.J.,Katinas, J.M.,Magdum, T.,Shah, K.,Wong, J.E.,O'Connor, C.E.,Fifer, A.N.,Wallace-Povirk, A.,Hou, Z.,Matherly, L.H.,Dann 3rd, C.E.,Gangjee, A. Structure-Based Design of Transport-Specific Multitargeted One-Carbon Metabolism Inhibitors in Cytosol and Mitochondria. J.Med.Chem. 2023 66 11294 11323 8FJU 37582241 Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF347 inhibitor 2022-12-20 2023-09-06 Nayeen, M.J.,Katinas, J.M.,Magdum, T.,Shah, K.,Wong, J.E.,O'Connor, C.E.,Fifer, A.N.,Wallace-Povirk, A.,Hou, Z.,Matherly, L.H.,Dann 3rd, C.E.,Gangjee, A. Structure-Based Design of Transport-Specific Multitargeted One-Carbon Metabolism Inhibitors in Cytosol and Mitochondria. J.Med.Chem. 2023 66 11294 11323 8FJV 37582241 Human GAR transformylase in complex with GAR substrate and AGF362 inhibitor 2022-12-20 2023-09-06 Nayeen, M.J.,Katinas, J.M.,Magdum, T.,Shah, K.,Wong, J.E.,O'Connor, C.E.,Fifer, A.N.,Wallace-Povirk, A.,Hou, Z.,Matherly, L.H.,Dann 3rd, C.E.,Gangjee, A. Structure-Based Design of Transport-Specific Multitargeted One-Carbon Metabolism Inhibitors in Cytosol and Mitochondria. J.Med.Chem. 2023 66 11294 11323 8FJW 37582241 Human GAR transformylase in complex with GAR substrate and AGF347 inhibitor 2022-12-20 2023-09-06 Nayeen, M.J.,Katinas, J.M.,Magdum, T.,Shah, K.,Wong, J.E.,O'Connor, C.E.,Fifer, A.N.,Wallace-Povirk, A.,Hou, Z.,Matherly, L.H.,Dann 3rd, C.E.,Gangjee, A. Structure-Based Design of Transport-Specific Multitargeted One-Carbon Metabolism Inhibitors in Cytosol and Mitochondria. J.Med.Chem. 2023 66 11294 11323 8FJX 37582241 Human GAR transformylase in complex with GAR substrate and AGF320 inhibitor 2022-12-20 2023-09-06 Nayeen, M.J.,Katinas, J.M.,Magdum, T.,Shah, K.,Wong, J.E.,O'Connor, C.E.,Fifer, A.N.,Wallace-Povirk, A.,Hou, Z.,Matherly, L.H.,Dann 3rd, C.E.,Gangjee, A. Structure-Based Design of Transport-Specific Multitargeted One-Carbon Metabolism Inhibitors in Cytosol and Mitochondria. J.Med.Chem. 2023 66 11294 11323 8FJY 37582241 Human GAR transformylase in complex with GAR substrate and AGF291 inhibitor 2022-12-20 2023-09-06 Nayeen, M.J.,Katinas, J.M.,Magdum, T.,Shah, K.,Wong, J.E.,O'Connor, C.E.,Fifer, A.N.,Wallace-Povirk, A.,Hou, Z.,Matherly, L.H.,Dann 3rd, C.E.,Gangjee, A. Structure-Based Design of Transport-Specific Multitargeted One-Carbon Metabolism Inhibitors in Cytosol and Mitochondria. J.Med.Chem. 2023 66 11294 11323 8EB3 Crystal structure of glutamate racemase from Helicobacter pylori in complex with a fragment 2022-08-30 2023-09-13 Cooling, G.T.,Propp, J.,Spies, M.A. Crystal structure of glutamate racemase from Helicobacter pylori in complex with a fragment To Be Published 0 0 0 0 8F5Q 36990095 Crystal structure of human PCNA in complex with the PIP box of FBH1 2022-11-15 2023-09-27 Liu, J.,Chaves-Arquero, B.,Wei, P.,Tencer, A.H.,Ruiz-Albor, A.,Zhang, G.,Blanco, F.J.,Kutateladze, T.G. Molecular insight into the PCNA-binding mode of FBH1. Structure 2023 31 511 0 8FSD 37811683 P130R mutant of soybean SHMT8 in complex with PLP-glycine and formylTHF 2023-01-09 2023-10-18 Korasick, D.A.,Owuocha, L.F.,Kandoth, P.K.,Tanner, J.J.,Mitchum, M.G.,Beamer, L.J. Structural and functional analysis of two SHMT8 variants associated with soybean cyst nematode resistance. Febs J. 2024 291 323 337 8FMK 37938120 Crystal structure of human KRAS with extended switch I loop 2022-12-23 2023-11-22 Brenner, R.J.,Landgraf, A.D.,Bum-Erdene, K.,Gonzalez-Gutierrez, G.,Meroueh, S.O. Crystal Packing Reveals a Potential Autoinhibited KRAS Dimer Interface and a Strategy for Small-Molecule Inhibition of RAS Signaling. Biochemistry 2023 62 3206 3213 8FMI 37938120 Crystal structure of human KRAS at 1.12 A 2022-12-23 2023-11-29 Brenner, R.J.,Landgraf, A.D.,Bum-Erdene, K.,Gonzalez-Gutierrez, G.,Meroueh, S.O. Crystal Packing Reveals a Potential Autoinhibited KRAS Dimer Interface and a Strategy for Small-Molecule Inhibition of RAS Signaling. Biochemistry 2023 62 3206 3213 8FJH 37269475 Crystal structure of RalA in a covalent complex with SOF-531 2022-12-19 2023-12-06 Landgraf, A.D.,Yeh, I.J.,Ghozayel, M.K.,Bum-Erdene, K.,Gonzalez-Gutierrez, G.,Meroueh, S.O. Exploring Covalent Bond Formation at Tyr-82 for Inhibition of Ral GTPase Activation. Chemmedchem 2023 18 0 0 8FJI 37269475 Crystal structure of RalA in a covalent complex with SOF-367 2022-12-19 2023-12-06 Landgraf, A.D.,Yeh, I.J.,Ghozayel, M.K.,Bum-Erdene, K.,Gonzalez-Gutierrez, G.,Meroueh, S.O. Exploring Covalent Bond Formation at Tyr-82 for Inhibition of Ral GTPase Activation. Chemmedchem 2023 18 0 0 8DHR 38042487 An ester mutant of SfGFP 2022-06-28 2024-01-17 Reddi, R.,Chatterjee, S.,Matulef, K.,Gustafson, A.,Gao, L.,Valiyaveetil, F.I. A facile approach for incorporating tyrosine esters to probe ion-binding sites and backbone hydrogen bonds. J.Biol.Chem. 2023 300 105517 105517 8THN 38042487 KcsA M96V mutant with Y78ester in High K+ 2023-07-17 2024-01-17 Reddi, R.,Chatterjee, S.,Matulef, K.,Gustafson, A.,Gao, L.,Valiyaveetil, F.I. A facile approach for incorporating tyrosine esters to probe ion-binding sites and backbone hydrogen bonds. J.Biol.Chem. 2023 300 105517 105517 8USM 38308631 FmlH Lectin Domain UTI89 - AM4085 2023-10-27 2024-02-14 Maddirala, A.R.,Tamadonfar, K.,Pinkner, J.S.,Sanick, D.,Hultgren, S.J.,Janetka, J.W. Discovery of Orally Bioavailable FmlH Lectin Antagonists as Treatment for Urinary Tract Infections. J.Med.Chem. 2024 67 3668 3678 8T4O 38324671 Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF347 inhibitor with no glutamate 2023-06-09 2024-02-21 Katinas, J.M.,Nayeen, M.J.,Schneider, M.,Shah, K.,Fifer, A.N.,Klapper, L.M.,Sharma, A.,Thalluri, K.,Van Nieuwenhze, M.S.,Hou, Z.,Gangjee, A.,Matherly, L.H.,Dann 3rd, C.E. Structural Characterization of 5-Substituted Pyrrolo[3,2- d ]pyrimidine Antifolate Inhibitors in Complex with Human Serine Hydroxymethyl Transferase 2. Biochemistry 2024 0 0 0 8T4P 38324671 Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and di-glutamate AGF347 inhibitor 2023-06-09 2024-02-21 Katinas, J.M.,Nayeen, M.J.,Schneider, M.,Shah, K.,Fifer, A.N.,Klapper, L.M.,Sharma, A.,Thalluri, K.,Van Nieuwenhze, M.S.,Hou, Z.,Gangjee, A.,Matherly, L.H.,Dann 3rd, C.E. Structural Characterization of 5-Substituted Pyrrolo[3,2- d ]pyrimidine Antifolate Inhibitors in Complex with Human Serine Hydroxymethyl Transferase 2. Biochemistry 2024 0 0 0 8TLC 38324671 Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and tri-glutamate AGF347 inhibitor 2023-07-26 2024-02-21 Katinas, J.M.,Nayeen, M.J.,Schneider, M.,Shah, K.,Fifer, A.N.,Klapper, L.M.,Sharma, A.,Thalluri, K.,Van Nieuwenhze, M.S.,Hou, Z.,Gangjee, A.,Matherly, L.H.,Dann 3rd, C.E. Structural Characterization of 5-Substituted Pyrrolo[3,2- d ]pyrimidine Antifolate Inhibitors in Complex with Human Serine Hydroxymethyl Transferase 2. Biochemistry 2024 0 0 0 8GDV Structure of M66I mutant of disulfide stabilized HIV-1 CA hexamer in complex with CPSF6 peptide and IP6 2023-03-06 2024-03-13 Huang, S.,Briganti, L.,Kvaratskhelia, M. Structure of M66I mutant of disulfide stabilized HIV-1 CA hexamer in complex with CPSF6 peptide and IP6 To Be Published 0 0 0 0 8GE0 38448574 Crystal structure of JADE1 PZP domain in complex with Histone H3 2023-03-06 2024-03-13 Gaurav, N.,Kanai, A.,Lachance, C.,Cox, K.L.,Liu, J.,Grzybowski, A.T.,Saksouk, N.,Klein, B.J.,Komata, Y.,Asada, S.,Ruthenburg, A.J.,Poirier, M.G.,Cote, J.,Yokoyama, A.,Kutateladze, T.G. Guiding the HBO1 complex function through the JADE subunit. Nat.Struct.Mol.Biol. 2024 0 0 0 8GKS 38324671 Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF291 inhibitor 2023-03-20 2024-03-20 Katinas, J.M.,Nayeen, M.J.,Schneider, M.,Shah, K.,Fifer, A.N.,Klapper, L.M.,Sharma, A.,Thalluri, K.,Van Nieuwenhze, M.S.,Hou, Z.,Gangjee, A.,Matherly, L.H.,Dann 3rd, C.E. Structural Characterization of 5-Substituted Pyrrolo[3,2- d ]pyrimidine Antifolate Inhibitors in Complex with Human Serine Hydroxymethyl Transferase 2. Biochemistry 2024 0 0 0 8GKT 38324671 Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF320 inhibitor 2023-03-20 2024-03-20 Katinas, J.M.,Nayeen, M.J.,Schneider, M.,Shah, K.,Fifer, A.N.,Klapper, L.M.,Sharma, A.,Thalluri, K.,Van Nieuwenhze, M.S.,Hou, Z.,Gangjee, A.,Matherly, L.H.,Dann 3rd, C.E. Structural Characterization of 5-Substituted Pyrrolo[3,2- d ]pyrimidine Antifolate Inhibitors in Complex with Human Serine Hydroxymethyl Transferase 2. Biochemistry 2024 0 0 0 8GKU 38324671 Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF355 inhibitor 2023-03-20 2024-03-20 Katinas, J.M.,Nayeen, M.J.,Schneider, M.,Shah, K.,Fifer, A.N.,Klapper, L.M.,Sharma, A.,Thalluri, K.,Van Nieuwenhze, M.S.,Hou, Z.,Gangjee, A.,Matherly, L.H.,Dann 3rd, C.E. Structural Characterization of 5-Substituted Pyrrolo[3,2- d ]pyrimidine Antifolate Inhibitors in Complex with Human Serine Hydroxymethyl Transferase 2. Biochemistry 2024 0 0 0 8GKW 38324671 Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF359 inhibitor 2023-03-20 2024-03-20 Katinas, J.M.,Nayeen, M.J.,Schneider, M.,Shah, K.,Fifer, A.N.,Klapper, L.M.,Sharma, A.,Thalluri, K.,Van Nieuwenhze, M.S.,Hou, Z.,Gangjee, A.,Matherly, L.H.,Dann 3rd, C.E. Structural Characterization of 5-Substituted Pyrrolo[3,2- d ]pyrimidine Antifolate Inhibitors in Complex with Human Serine Hydroxymethyl Transferase 2. Biochemistry 2024 0 0 0 8GKY 38324671 Human mitochondrial serine hydroxymethyltransferase (SHMT2) Y105F in complex with PLP, glycine and AGF359 inhibitor 2023-03-20 2024-03-20 Katinas, J.M.,Nayeen, M.J.,Schneider, M.,Shah, K.,Fifer, A.N.,Klapper, L.M.,Sharma, A.,Thalluri, K.,Van Nieuwenhze, M.S.,Hou, Z.,Gangjee, A.,Matherly, L.H.,Dann 3rd, C.E. Structural Characterization of 5-Substituted Pyrrolo[3,2- d ]pyrimidine Antifolate Inhibitors in Complex with Human Serine Hydroxymethyl Transferase 2. Biochemistry 2024 0 0 0 8GKZ 38324671 Human mitochondrial serine hydroxymethyltransferase (SHMT2) Y105F in complex with PLP, glycine and AGF362 inhibitor 2023-03-20 2024-03-20 Katinas, J.M.,Nayeen, M.J.,Schneider, M.,Shah, K.,Fifer, A.N.,Klapper, L.M.,Sharma, A.,Thalluri, K.,Van Nieuwenhze, M.S.,Hou, Z.,Gangjee, A.,Matherly, L.H.,Dann 3rd, C.E. Structural Characterization of 5-Substituted Pyrrolo[3,2- d ]pyrimidine Antifolate Inhibitors in Complex with Human Serine Hydroxymethyl Transferase 2. Biochemistry 2024 0 0 0 8SUV CHIP-TPR in complex with the C-terminus of CHIC2 2023-05-13 2024-03-20 Callahan, M.,Hodul, M.,Carroll, E.,Ravalin, M.,Nadel, C.,de Silva, A.,Cupo, A.,McDermott, L.,Nix, J.,Page, R.,Kao, A.,Gestwicki, J. Interaction with the membrane-anchored protein CHIC2 constrains the ubiquitin ligase activity of CHIP Biorxiv 2023 0 0 0