PDB_ID	PUBMED_CID	STRUCTURE TITLE	DEPOSITION DATE	RELEASE DATE	AUTHORS	CITATION TITLE	JOURNAL	YEAR	VOLUME	FIRST PAGE	LAST PAGE
7N2P	36477533	AS4.3-RNASEH2b-HLA*B27	2021-05-29	2022-12-07	Yang, X.,Garner, L.I.,Zvyagin, I.V.,Paley, M.A.,Komech, E.A.,Jude, K.M.,Zhao, X.,Fernandes, R.A.,Hassman, L.M.,Paley, G.L.,Savvides, C.S.,Brackenridge, S.,Quastel, M.N.,Chudakov, D.M.,Bowness, P.,Yokoyama, W.M.,McMichael, A.J.,Gillespie, G.M.,Garcia, K.C.	Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides.	Nature	2022	612	771	777	
8F93	37460812	WDR5 covalently modified at Y228 by (R)-2-SF	2022-11-23	2023-05-31	Chen, Y.,Craven, G.B.,Kamber, R.A.,Cuesta, A.,Zhersh, S.,Moroz, Y.S.,Bassik, M.C.,Taunton, J.	Direct mapping of ligandable tyrosines and lysines in cells with chiral sulfonyl fluoride probes.	Nat.Chem.	2023	15	1616	1625	
8SSN	37590418	Abl kinase in complex with SKI and asciminib	2023-05-08	2023-09-06	Kim, C.,Ludewig, H.,Hadzipasic, A.,Kutter, S.,Nguyen, V.,Kern, D.	A biophysical framework for double-drugging kinases.	Proc.Natl.Acad.Sci.USA	2023	120	0	0	
8G4Y	38056465	Structure of ZNRF3 ECD bound to peptide MK1-3.6.10	2023-02-10	2023-12-20	Kschonsak, Y.T.,Gao, X.,Miller, S.E.,Hwang, S.,Marei, H.,Wu, P.,Li, Y.,Ruiz, K.,Dorighi, K.,Holokai, L.,Perampalam, P.,Tsai, W.K.,Kee, Y.S.,Agard, N.J.,Harris, S.F.,Hannoush, R.N.,de Sousa E Melo, F.	Potent and selective binders of the E3 ubiquitin ligase ZNRF3 stimulate Wnt signaling and intestinal organoid growth.	Cell Chem Biol	2024	31	1176	0	
8FEQ	38293747	16mer self-complementary duplex RNA with two separated s(2)U:s(2)U pairs	2022-12-06	2024-01-24	Ding, D.,Fang, Z.,Kim, S.C.,O'Flaherty, D.K.,Jia, X.,Stone, T.B.,Zhou, L.,Szostak, J.W.	Unusual Base Pair between Two 2-Thiouridines and Its Implication for Nonenzymatic RNA Copying.	J.Am.Chem.Soc.	2024	146	3861	3871	
8FER	38293747	16mer self-complementary duplex RNA with two continuous s(2)U:s(2)U pairs	2022-12-06	2024-01-24	Ding, D.,Fang, Z.,Kim, S.C.,O'Flaherty, D.K.,Jia, X.,Stone, T.B.,Zhou, L.,Szostak, J.W.	Unusual Base Pair between Two 2-Thiouridines and Its Implication for Nonenzymatic RNA Copying.	J.Am.Chem.Soc.	2024	146	3861	3871	
8TWO	38354245	AvrB bound with UDP and RIN4_T166-Rha	2023-08-21	2024-02-28	Peng, W.,Garcia, N.,Servage, K.A.,Kohler, J.J.,Ready, J.M.,Tomchick, D.R.,Fernandez, J.,Orth, K.	Pseudomonas effector AvrB is a glycosyltransferase that rhamnosylates plant guardee protein RIN4.	Sci Adv	2024	10	0	0	
8TWS	38354245	AvrB bound with UDP-rhamnose and RIN4 C-NOI motif	2023-08-21	2024-02-28	Peng, W.,Garcia, N.,Servage, K.A.,Kohler, J.J.,Ready, J.M.,Tomchick, D.R.,Fernandez, J.,Orth, K.	Pseudomonas effector AvrB is a glycosyltransferase that rhamnosylates plant guardee protein RIN4.	Sci Adv	2024	10	0	0	
8VAX	38579124	Cadmium catalyzed primer extension product with 14mer primer and mixed phosphorothioate activated G monomer	2023-12-11	2024-04-17	Fang, Z.,Pazienza, L.T.,Zhang, J.,Tam, C.P.,Szostak, J.W.	Catalytic Metal Ion-Substrate Coordination during Nonenzymatic RNA Primer Extension.	J.Am.Chem.Soc.	2024	146	10632	10639	
8V10	38776904	Structure of a Saccharomyces cerevisiae Mps1 peptide bound to dwarf Ndc80 Complex	2023-11-19	2024-05-15	Zahm, J.A.,Harrison, S.C.	A communication hub for phosphoregulation of kinetochore-microtubule attachment.	Curr.Biol.	2024	34	2308	0	
8V11	38776904	Structure of a Saccharomyces cerevisiae Ipl1 peptide Bound to dwarf Ndc80 complex	2023-11-19	2024-05-15	Zahm, J.A.,Harrison, S.C.	A communication hub for phosphoregulation of kinetochore-microtubule attachment.	Curr.Biol.	2024	34	2308	0	
8TDY	38818863	16mer self-complementary duplex RNA with D:U pair sequence 1	2023-07-05	2024-06-12	Jia, X.,Fang, Z.,Kim, S.C.,Ding, D.,Zhou, L.,Szostak, J.W.	Diaminopurine in Nonenzymatic RNA Template Copying.	J.Am.Chem.Soc.	2024	146	15897	15907	
8TDZ	38818863	16mer self-complementary duplex RNA with D:U pair sequence 2	2023-07-05	2024-06-12	Jia, X.,Fang, Z.,Kim, S.C.,Ding, D.,Zhou, L.,Szostak, J.W.	Diaminopurine in Nonenzymatic RNA Template Copying.	J.Am.Chem.Soc.	2024	146	15897	15907	
8TE0	38818863	16mer self-complementary duplex RNA with D:C pair sequence 1	2023-07-05	2024-06-12	Jia, X.,Fang, Z.,Kim, S.C.,Ding, D.,Zhou, L.,Szostak, J.W.	Diaminopurine in Nonenzymatic RNA Template Copying.	J.Am.Chem.Soc.	2024	146	15897	15907	
8TE2	38818863	16mer self-complementary duplex RNA with D:C pair sequence 2	2023-07-05	2024-06-12	Jia, X.,Fang, Z.,Kim, S.C.,Ding, D.,Zhou, L.,Szostak, J.W.	Diaminopurine in Nonenzymatic RNA Template Copying.	J.Am.Chem.Soc.	2024	146	15897	15907	
8UVY	39506119	Structure of AKT1(E17K) with compound 3	2023-11-05	2024-09-04	Craven, G.B.,Chu, H.,Sun, J.D.,Carelli, J.D.,Coyne, B.,Chen, H.,Chen, Y.,Ma, X.,Das, S.,Kong, W.,Zajdlik, A.D.,Yang, K.S.,Reisberg, S.H.,Thompson, P.A.,Lipford, J.R.,Taunton, J.	Mutant-selective AKT inhibition through lysine targeting and neo-zinc chelation.	Nature	2025	637	205	214	
8UW2	39506119	Structure of AKT1(E17K) with compound 3 (zinc-free)	2023-11-05	2024-09-04	Craven, G.B.,Chu, H.,Sun, J.D.,Carelli, J.D.,Coyne, B.,Chen, H.,Chen, Y.,Ma, X.,Das, S.,Kong, W.,Zajdlik, A.D.,Yang, K.S.,Reisberg, S.H.,Thompson, P.A.,Lipford, J.R.,Taunton, J.	Mutant-selective AKT inhibition through lysine targeting and neo-zinc chelation.	Nature	2025	637	205	214	
8UW9	39506119	Structure of AKT1(E17K) with compound 4	2023-11-06	2024-09-04	Craven, G.B.,Chu, H.,Sun, J.D.,Carelli, J.D.,Coyne, B.,Chen, H.,Chen, Y.,Ma, X.,Das, S.,Kong, W.,Zajdlik, A.D.,Yang, K.S.,Reisberg, S.H.,Thompson, P.A.,Lipford, J.R.,Taunton, J.	Mutant-selective AKT inhibition through lysine targeting and neo-zinc chelation.	Nature	2025	637	205	214	
9C7W	39332817	human OC43 Main Protease (1-303) in complex with potent inhibitor	2024-06-11	2024-10-16	Barkan, D.T.,Garland, K.,Zhang, L.,Eastman, R.T.,Hesse, M.,Knapp, M.,Ornelas, E.,Tang, J.,Cortopassi, W.A.,Wang, Y.,King, F.,Jia, W.,Nguyen, Z.,Frank, A.O.,Chan, R.,Fang, E.,Fuller, D.,Busby, S.,Carias, H.,Donahue, K.,Tandeske, L.,Diagana, T.T.,Jarrousse, N.,Moser, H.,Sarko, C.,Dovala, D.,Moquin, S.,Marx, V.M.	Identification of Potent, Broad-Spectrum Coronavirus Main Protease Inhibitors for Pandemic Preparedness.	J.Med.Chem.	2024	67	17454	17471	
9CJ2	39149408	Dual phosphorylated human p38 alpha	2024-07-05	2024-11-13	Stadnicki, E.J.,Ludewig, H.,Kumar, R.P.,Wang, X.,Qiao, Y.,Kern, D.,Bradshaw, N.	Dual-Action Kinase Inhibitors Influence p38 alpha MAP Kinase Dephosphorylation.	Biorxiv	2024	0	0	0	
9CJ3	39149408	Dual phosphorylated human p38 alpha bound to pexmetinib	2024-07-05	2024-11-13	Stadnicki, E.J.,Ludewig, H.,Kumar, R.P.,Wang, X.,Qiao, Y.,Kern, D.,Bradshaw, N.	Dual-Action Kinase Inhibitors Influence p38 alpha MAP Kinase Dephosphorylation.	Biorxiv	2024	0	0	0	
9C76		LRRK2 Roc domain RP (Ras-pocket) complexed to Divarasib	2024-06-10	2024-12-11	Zhu, L.Y.,Shokat, K.M.	LRRK2 Roc domain RP (Ras-pocket) complexed to Divarasib	To Be Published	0	0	0	0	
9CG2	39712206	DUF512 protein from Pyrococcus furiosus	2024-06-28	2025-03-05	Wang, B.,Solinski, A.E.,Radle, M.I.,Peduzzi, O.M.,Knox, H.L.,Cui, J.,Maurya, R.K.,Yennawar, N.H.,Booker, S.J.	Structural Evidence for DUF512 as a Radical S -Adenosylmethionine Cobalamin-Binding Domain.	Acs Bio Med Chem Au	2024	4	319	330	
9DMM	40391409	Crystal structure of human KRAS G12C covalently bound to Divarasib (GDC6036)	2024-09-13	2025-05-21	Fernando, M.C.,Craven, G.B.,Shokat, K.M.	The structure of KRAS G12C bound to divarasib highlights features of potent switch-II pocket engagement.	Small Gtpases	2024	15	1	7	
9OJ3	40531663	Crystal structure of the SpyTag003-SpyCatcher003 complex	2025-05-06	2025-06-25	Ralston, C.Y.,Gupta, S.,Del Mundo, J.T.,Soe, A.C.,Russell, B.,Rad, B.,Tyler, J.,Paul, S.,Kahan, D.N.,Kristensen, L.G.,Subramanian, S.,Kidd, S.,Burnett, K.,Sankaran, B.,Classen, S.,Prigozhin, D.M.,Taylor, J.R.,Dickert, J.M.,Royal, K.B.,Rozales, A.,Ortega, S.L.,Allaire, M.,Nix, J.C.,Hura, G.L.,Holton, J.M.,Hammel, M.,Adams, P.D.	ALS-ENABLE: creating synergy and opportunity at the Advanced Light Source synchrotron structural biology beamlines.	J.Synchrotron Radiat.	2025	32	1059	1067	
9DNQ	40880185	Structure of UBR2-RYF complex	2024-09-17	2025-08-13	Huang, S.T.,Chen, D.H.,Ren, T.,Thomas, N.,Wu, J.,Sankaran, B.,Jones, R.,Taylor, S.,Chen, Y.	An alternative pocket for binding the N-degrons by the UBR1 and UBR2 ubiquitin E3 ligases.	Protein Sci.	2025	34	0	0	
9PXZ	41429045	PRMT5 Bound to Compound 6 and MTA	2025-08-06	2026-01-07	Debien, L.,Armstrong, M.K.,Farr, J.D.,Ferrao, R.D.,Gupta, P.L.,Niu, C.,Anderson, A.J.,Benner, P.,Bristol, A.N.,Chin, E.,Chou, C.,Deng, Y.,Fu, X.,Gheiratmand, M.,Hull, S.M.,Hung, J.C.,June, B.,Kirschman, J.H.,Le, H.,Malik, B.,Mitchell, M.L.,Mukherjee, P.K.,Nguyen, S.V.,Notte, G.T.,Orf, J.,Roa, D.E.,Santos, R.,Schrier, A.J.,Spence, K.A.,Sura, R.,Yang, Z.Y.,Zane, D.,Zahabian, A.N.,Zavorotinskaya, T.	Discovery of Bis-Acyl Hydrazides as Potent and Bioavailable MTA-Cooperative PRMT5 Inhibitors: A Case Study of Leveraging the Deuterium Kinetic Isotope Effect.	J.Med.Chem.	2026	69	289	304	
9PY1	41429045	PRMT5 Bound to Compound 8 and MTA	2025-08-06	2026-01-07	Debien, L.,Armstrong, M.K.,Farr, J.D.,Ferrao, R.D.,Gupta, P.L.,Niu, C.,Anderson, A.J.,Benner, P.,Bristol, A.N.,Chin, E.,Chou, C.,Deng, Y.,Fu, X.,Gheiratmand, M.,Hull, S.M.,Hung, J.C.,June, B.,Kirschman, J.H.,Le, H.,Malik, B.,Mitchell, M.L.,Mukherjee, P.K.,Nguyen, S.V.,Notte, G.T.,Orf, J.,Roa, D.E.,Santos, R.,Schrier, A.J.,Spence, K.A.,Sura, R.,Yang, Z.Y.,Zane, D.,Zahabian, A.N.,Zavorotinskaya, T.	Discovery of Bis-Acyl Hydrazides as Potent and Bioavailable MTA-Cooperative PRMT5 Inhibitors: A Case Study of Leveraging the Deuterium Kinetic Isotope Effect.	J.Med.Chem.	2026	69	289	304	
9MW1		Structure of SARM1 TIR domain bound to G8758	2025-01-16	2026-02-04	Wallweber, H.A.,Sudhamsu, J.	Structure of SARM1 TIR domain bound to G8758	To Be Published	0	0	0	0	
9NKQ	41678610	Coevolved affibody pair A6B6	2025-03-01	2026-02-04	Yang, A.,Jiang, H.,Jude, K.M.,Akpinaroglu, D.,Allenspach, S.,Li, A.J.,Bowden, J.,Perez, C.P.,Liu, L.,Huang, P.S.,Kortemme, T.,Listgarten, J.,Garcia, K.C.	Structural ontogeny of protein-protein interactions.	Science	2026	391	0	0	
9NMV	41855322	TCR156 S32Halpha bound to HLA A*02:01-PAP	2025-03-04	2026-03-18	Chen, X.,Mao, Z.,Kolawole, E.M.,Persechino, M.,Jude, K.M.,Ogishi, M.,Mo, K.C.,McLaughlin, J.,Cheng, D.,Xiang, X.,Yang, X.,Gee, C.,Liu, S.,Yang, A.,Obenaus, M.,Wang, N.,Noguchi, M.,Stoyanova, T.,Lee, J.K.,Good, Z.,Latorraca, N.R.,Evavold, B.D.,Witte, O.N.,Garcia, K.C.	Overcoming T cell tolerance to tumor self-antigens through catch-bond engineering.	Science	2026	391	0	0	
9DSG		Crystal structure of the SARS-CoV-2 RBD in complex with the cow antibody P2	2024-09-27	2026-04-08	Fan, C.,Bjorkman, P.J.	Crystal structure of the SARS-CoV-2 RBD in complex with the cow antibody P2	To Be Published	0	0	0	0	
9DSK		Crystal structure of the cow antibody 115	2024-09-27	2026-04-08	Fan, C.,Bjorkman, P.J.	Crystal structure of the cow antibody 115	To Be Published	0	0	0	0	
9ZDU		Crystal structure of SARS-CoV-2 RBD in complex with human Ab401 Fab	2025-11-26	2026-04-22	Skelly, A.N.,Fan, C.,Bjorkman, P.J.,Hahn, B.B.	mRNA delivery of a class 1/4 SARS-CoV-2 neutralizing antibody protects against diverse sarbecoviruses in a lethal mouse challenge model	To Be Published	0	0	0	0	
9Y5H		Crystal structure of rv-SNARE/sc-t-SNARE-diff-#3.3 complex	2025-09-04	2026-05-13	Somiya, M.,Bera, A.K.,King, N.	Computational design of two-component membrane fusion proteins	To Be Published	0	0	0	0