PDB_ID PUBMED_CID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS CITATION TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 1GCB GAL6, YEAST BLEOMYCIN HYDROLASE DNA-BINDING PROTEASE (THIOL) 1995-07-18 1995-10-15 Joshua-Tor, L.,Xu, H.E.,Johnston, S.A.,Rees, D.C. Crystal structure of a conserved protease that binds DNA: the bleomycin hydrolase, Gal6. Science 1995 269 945 950 1KAP THREE-DIMENSIONAL STRUCTURE OF THE ALKALINE PROTEASE OF PSEUDOMONAS AERUGINOSA: A TWO-DOMAIN PROTEIN WITH A CALCIUM BINDING PARALLEL BETA ROLL MOTIF 1995-06-08 1995-10-15 Baumann, U.,Wu, S.,Flaherty, K.M.,McKay, D.B. Three-dimensional structure of the alkaline protease of Pseudomonas aeruginosa: a two-domain protein with a calcium binding parallel beta roll motif. EMBO J. 1993 12 3357 3364 1GYP CRYSTAL STRUCTURE OF GLYCOSOMAL GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM LEISHMANIA MEXICANA: IMPLICATIONS FOR STRUCTURE-BASED DRUG DESIGN AND A NEW POSITION FOR THE INORGANIC PHOSPHATE BINDING SITE 1995-08-01 1995-12-07 Kim, H.,Feil, I.K.,Verlinde, C.L.,Petra, P.H.,Hol, W.G. Crystal structure of glycosomal glyceraldehyde-3-phosphate dehydrogenase from Leishmania mexicana: implications for structure-based drug design and a new position for the inorganic phosphate binding site. Biochemistry 1995 34 14975 14986 1HMH THREE-DIMENSIONAL STRUCTURE OF A HAMMERHEAD RIBOZYME 1995-06-06 1995-12-07 Pley, H.W.,Flaherty, K.M.,McKay, D.B. Three-dimensional structure of a hammerhead ribozyme. Nature 1994 372 68 74 1VAR MITOCHONDRIAL MANGANESE SUPEROXIDE DISMUTASE VARIANT WITH ILE 58 REPLACED BY THR 1996-01-04 1996-06-10 Borgstahl, G.E.,Parge, H.E.,Hickey, M.J.,Johnson, M.J.,Boissinot, M.,Hallewell, R.A.,Lepock, J.R.,Cabelli, D.E.,Tainer, J.A. Human mitochondrial manganese superoxide dismutase polymorphic variant Ile58Thr reduces activity by destabilizing the tetrameric interface. Biochemistry 1996 35 4287 4297 1GAF 48G7 HYBRIDOMA LINE FAB COMPLEXED WITH HAPTEN 5-(PARA-NITROPHENYL PHOSPHONATE)-PENTANOIC ACID 1996-02-06 1996-07-11 Patten, P.A.,Gray, N.S.,Yang, P.L.,Marks, C.B.,Wedemayer, G.J.,Boniface, J.J.,Stevens, R.C.,Schultz, P.G. The immunological evolution of catalysis. Science 1996 271 1086 1091 283D A CURVED RNA HELIX INCORPORATING AN INTERNAL LOOP WITH G-A AND A-A NON-WATSON-CRICK BASE PAIRING 1996-09-03 1996-09-30 Baeyens, K.J.,De Bondt, H.L.,Pardi, A.,Holbrook, S.R. A curved RNA helix incorporating an internal loop with G.A and A.A non-Watson-Crick base pairing. Proc.Natl.Acad.Sci.USA 1996 93 12851 12855 1THJ CARBONIC ANHYDRASE FROM METHANOSARCINA 1996-04-02 1996-10-14 Kisker, C.,Schindelin, H.,Alber, B.E.,Ferry, J.G.,Rees, D.C. A left-hand beta-helix revealed by the crystal structure of a carbonic anhydrase from the archaeon Methanosarcina thermophila. EMBO J. 1996 15 2323 2330 1LUC BACTERIAL LUCIFERASE 1996-05-10 1996-12-07 Fisher, A.J.,Thompson, T.B.,Thoden, J.B.,Baldwin, T.O.,Rayment, I. The 1.5-A resolution crystal structure of bacterial luciferase in low salt conditions. J.Biol.Chem. 1996 271 21956 21968 2MBW RECOMBINANT SPERM WHALE MYOGLOBIN (MET) 1996-06-20 1996-12-23 Brucker, E.A.,Olson, J.S.,Phillips Jr., G.N.,Dou, Y.,Ikeda-Saito, M. High resolution crystal structures of the deoxy, oxy, and aquomet forms of cobalt myoglobin. J.Biol.Chem. 1996 271 25419 25422 1DUT FIV DUTP PYROPHOSPHATASE 1996-09-15 1997-01-27 Prasad, G.S.,Stura, E.A.,McRee, D.E.,Laco, G.S.,Hasselkus-Light, C.,Elder, J.H.,Stout, C.D. Crystal structure of dUTP pyrophosphatase from feline immunodeficiency virus. Protein Sci. 1996 5 2429 2437 1GTO HIGH RESOLUTION STRUCTURE OF A HYPERSTABLE HELICAL BUNDLE PROTEIN MUTANT 1996-04-23 1997-01-27 Predki, P.F.,Agrawal, V.,Brunger, A.T.,Regan, L. Amino-acid substitutions in a surface turn modulate protein stability. Nat.Struct.Biol. 1996 3 54 58 1FAG STRUCTURE OF CYTOCHROME P450 1996-08-01 1997-02-12 Li, H.,Poulos, T.L. The structure of the cytochrome p450BM-3 haem domain complexed with the fatty acid substrate, palmitoleic acid. Nat.Struct.Biol. 1997 4 140 146 3KMB COMPLEX OF 3'-SULFO-LEWIS-X WITH A SELECTIN-LIKE MUTANT OF MANNOSE-BINDING PROTEIN A 1996-11-07 1997-02-12 Ng, K.K.,Weis, W.I. Structure of a selectin-like mutant of mannose-binding protein complexed with sialylated and sulfated Lewis(x) oligosaccharides. Biochemistry 1997 36 979 988 1LRV A LEUCINE-RICH REPEAT VARIANT WITH A NOVEL REPETITIVE PROTEIN STRUCTURAL MOTIF 1996-11-05 1997-03-12 Peters, J.W.,Stowell, M.H.,Rees, D.C. A leucine-rich repeat variant with a novel repetitive protein structural motif. Nat.Struct.Biol. 1996 3 991 994 1OIS YEAST DNA TOPOISOMERASE I, N-TERMINAL FRAGMENT 1996-09-14 1997-03-12 Lue, N.,Sharma, A.,Mondragon, A.,Wang, J.C. A 26 kDa yeast DNA topoisomerase I fragment: crystallographic structure and mechanistic implications. Structure 1995 3 1315 1322 1TAL ALPHA-LYTIC PROTEASE AT 120 K (SINGLE STRUCTURE MODEL) 1996-10-30 1997-04-01 Rader, S.D.,Agard, D.A. Conformational substates in enzyme mechanism: the 120 K structure of alpha-lytic protease at 1.5 A resolution. Protein Sci. 1997 6 1375 1386 2MIN NITROGENASE MOFE PROTEIN FROM AZOTOBACTER VINELANDII, OXIDIZED STATE 1996-12-20 1997-04-01 Peters, J.W.,Stowell, M.H.,Soltis, S.M.,Finnegan, M.G.,Johnson, M.K.,Rees, D.C. Redox-dependent structural changes in the nitrogenase P-cluster. Biochemistry 1997 36 1181 1187 3MIN NITROGENASE MOFE PROTEIN FROM AZOTOBACTER VINELANDII, OXIDIZED STATE 1996-12-20 1997-04-01 Peters, J.W.,Stowell, M.H.,Soltis, S.M.,Finnegan, M.G.,Johnson, M.K.,Rees, D.C. Redox-dependent structural changes in the nitrogenase P-cluster. Biochemistry 1997 36 1181 1187 1IVY PHYSIOLOGICAL DIMER HPP PRECURSOR 1996-06-12 1997-04-21 Rudenko, G.,Bonten, E.,d'Azzo, A.,Hol, W.G. Three-dimensional structure of the human 'protective protein': structure of the precursor form suggests a complex activation mechanism. Structure 1995 3 1249 1259 1SRR CRYSTAL STRUCTURE OF A PHOSPHATASE RESISTANT MUTANT OF SPORULATION RESPONSE REGULATOR SPO0F FROM BACILLUS SUBTILIS 1996-04-10 1997-04-21 Madhusudan,Zapf, J.,Whiteley, J.M.,Hoch, J.A.,Xuong, N.H.,Varughese, K.I. Crystal structure of a phosphatase-resistant mutant of sporulation response regulator Spo0F from Bacillus subtilis. Structure 1996 4 679 690 1BPX DNA POLYMERASE BETA/DNA COMPLEX 1997-04-11 1997-06-16 Sawaya, M.R.,Prasad, R.,Wilson, S.H.,Kraut, J.,Pelletier, H. Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism. Biochemistry 1997 36 11205 11215 1BPY HUMAN DNA POLYMERASE BETA COMPLEXED WITH GAPPED DNA AND DDCTP 1997-04-15 1997-06-16 Sawaya, M.R.,Prasad, R.,Wilson, S.H.,Kraut, J.,Pelletier, H. Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism. Biochemistry 1997 36 11205 11215 1BPZ HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA 1997-04-14 1997-06-16 Sawaya, M.R.,Prasad, R.,Wilson, S.H.,Kraut, J.,Pelletier, H. Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism. Biochemistry 1997 36 11205 11215 2ULL MULTIPLE CONFORMATION STRUCTURE OF ALPHA-LYTIC PROTEASE AT 120 K 1996-11-26 1997-07-07 Rader, S.D.,Agard, D.A. Conformational substates in enzyme mechanism: the 120 K structure of alpha-lytic protease at 1.5 A resolution. Protein Sci. 1997 6 1375 1386 1CA0 BOVINE CHYMOTRYPSIN COMPLEXED TO APPI 1997-01-23 1997-07-23 Scheidig, A.J.,Hynes, T.R.,Pelletier, L.A.,Wells, J.A.,Kossiakoff, A.A. Crystal structures of bovine chymotrypsin and trypsin complexed to the inhibitor domain of Alzheimer's amyloid beta-protein precursor (APPI) and basic pancreatic trypsin inhibitor (BPTI): engineering of inhibitors with altered specificities. Protein Sci. 1997 6 1806 1824 1AEI CRYSTAL STRUCTURE OF THE ANNEXIN XII HEXAMER 1995-09-23 1997-08-20 Luecke, H.,Chang, B.T.,Mailliard, W.S.,Schlaepfer, D.D.,Haigler, H.T. Crystal structure of the annexin XII hexamer and implications for bilayer insertion. Nature 1995 378 512 515 1AKZ HUMAN URACIL-DNA GLYCOSYLASE 1997-05-27 1997-08-20 Parikh, S.S.,Mol, C.D.,Slupphaug, G.,Bharati, S.,Krokan, H.E.,Tainer, J.A. Base excision repair initiation revealed by crystal structures and binding kinetics of human uracil-DNA glycosylase with DNA. Embo J. 1998 17 5214 5226 1AK5 INOSINE MONOPHOSPHATE DEHYDROGENASE (IMPDH) FROM TRITRICHOMONAS FOETUS 1997-05-28 1997-09-17 Whitby, F.G.,Luecke, H.,Kuhn, P.,Somoza, J.R.,Huete-Perez, J.A.,Phillips, J.D.,Hill, C.P.,Fletterick, R.J.,Wang, C.C. Crystal structure of Tritrichomonas foetus inosine-5'-monophosphate dehydrogenase and the enzyme-product complex. Biochemistry 1997 36 10666 10674 5EAS 5-EPI-ARISTOLOCHENE SYNTHASE FROM NICOTIANA TABACUM 1997-06-19 1997-10-15 Starks, C.M.,Back, K.,Chappell, J.,Noel, J.P. Structural basis for cyclic terpene biosynthesis by tobacco 5-epi-aristolochene synthase. Science 1997 277 1815 1820 1AIG PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES IN THE D+QB-CHARGE SEPARATED STATE 1997-04-17 1997-10-22 Stowell, M.H.,McPhillips, T.M.,Rees, D.C.,Soltis, S.M.,Abresch, E.,Feher, G. Light-induced structural changes in photosynthetic reaction center: implications for mechanism of electron-proton transfer. Science 1997 276 812 816 1AIJ PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES IN THE CHARGE-NEUTRAL DQAQB STATE 1997-04-18 1997-10-22 Stowell, M.H.,McPhillips, T.M.,Rees, D.C.,Soltis, S.M.,Abresch, E.,Feher, G. Light-induced structural changes in photosynthetic reaction center: implications for mechanism of electron-proton transfer. Science 1997 276 812 816 1AJ7 IMMUNOGLOBULIN 48G7 GERMLINE FAB ANTIBODY COMPLEXED WITH HAPTEN 5-(PARA-NITROPHENYL PHOSPHONATE)-PENTANOIC ACID. AFFINITY MATURATION OF AN ESTEROLYTIC ANTIBODY 1997-05-15 1997-11-12 Wedemayer, G.J.,Patten, P.A.,Wang, L.H.,Schultz, P.G.,Stevens, R.C. Structural insights into the evolution of an antibody combining site. Science 1997 276 1665 1669 1JCK T-CELL RECEPTOR BETA CHAIN COMPLEXED WITH SEC3 SUPERANTIGEN 1996-10-22 1997-11-12 Fields, B.A.,Malchiodi, E.L.,Li, H.,Ysern, X.,Stauffacher, C.V.,Schlievert, P.M.,Karjalainen, K.,Mariuzza, R.A. Crystal structure of a T-cell receptor beta-chain complexed with a superantigen. Nature 1996 384 188 192 2RCS IMMUNOGLOBULIN 48G7 GERMLINE FAB-AFFINITY MATURATION OF AN ESTEROLYTIC ANTIBODY 1997-05-14 1997-11-12 Wedemayer, G.J.,Patten, P.A.,Wang, L.H.,Schultz, P.G.,Stevens, R.C. Structural insights into the evolution of an antibody combining site. Science 1997 276 1665 1669 5EAT 5-EPI-ARISTOLOCHENE SYNTHASE FROM NICOTIANA TABACUM WITH SUBSTRATE ANALOG FARNESYL HYDROXYPHOSPHONATE 1997-07-24 1997-11-12 Starks, C.M.,Back, K.,Chappell, J.,Noel, J.P. Structural basis for cyclic terpene biosynthesis by tobacco 5-epi-aristolochene synthase. Science 1997 277 1815 1820 6FD1 7-FE FERREDOXIN FROM AZOTOBACTER VINELANDII LOW TEMPERATURE, 1.35 A 1997-09-17 1997-11-12 Stout, C.D.,Stura, E.A.,McRee, D.E. Structure of Azotobacter vinelandii 7Fe ferredoxin at 1.35 A resolution and determination of the [Fe-S] bonds with 0.01 A accuracy. J.Mol.Biol. 1998 278 629 639 1MMA X-RAY STRUCTURES OF THE MGADP, MGATPGAMMAS, AND MGAMPPNP COMPLEXES OF THE DICTYOSTELIUM DISCOIDEUM MYOSIN MOTOR DOMAIN 1997-07-18 1997-12-03 Gulick, A.M.,Bauer, C.B.,Thoden, J.B.,Rayment, I. X-ray structures of the MgADP, MgATPgammaS, and MgAMPPNP complexes of the Dictyostelium discoideum myosin motor domain. Biochemistry 1997 36 11619 11628 13PK TERNARY COMPLEX OF PHOSPHOGLYCERATE KINASE FROM TRYPANOSOMA BRUCEI 1996-11-23 1997-12-24 Bernstein, B.E.,Michels, P.A.,Hol, W.G. Synergistic effects of substrate-induced conformational changes in phosphoglycerate kinase activation. Nature 1997 385 275 278 1AOP SULFITE REDUCTASE STRUCTURE AT 1.6 ANGSTROM RESOLUTION 1997-07-08 1997-12-24 Crane, B.R.,Siegel, L.M.,Getzoff, E.D. Sulfite reductase structure at 1.6 A: evolution and catalysis for reduction of inorganic anions. Science 1995 270 59 67 1AUA PHOSPHATIDYLINOSITOL TRANSFER PROTEIN SEC14P FROM SACCHAROMYCES CEREVISIAE 1997-08-20 1997-12-24 Sha, B.,Phillips, S.E.,Bankaitis, V.A.,Luo, M. Crystal structure of the Saccharomyces cerevisiae phosphatidylinositol-transfer protein. Nature 1998 391 506 510 1KAW STRUCTURE OF SINGLE STRANDED DNA BINDING PROTEIN (SSB) 1996-12-06 1997-12-31 Raghunathan, S.,Ricard, C.S.,Lohman, T.M.,Waksman, G. Crystal structure of the homo-tetrameric DNA binding domain of Escherichia coli single-stranded DNA-binding protein determined by multiwavelength x-ray diffraction on the selenomethionyl protein at 2.9-A resolution. Proc.Natl.Acad.Sci.USA 1997 94 6652 6657 1CII COLICIN IA 1997-01-08 1998-01-14 Wiener, M.,Freymann, D.,Ghosh, P.,Stroud, R.M. Crystal structure of colicin Ia. Nature 1997 385 461 464 2AOP SULFITE REDUCTASE: REDUCED WITH CRII EDTA, SIROHEME FEII, [4FE-4S] +1, PHOSPHATE BOUND 1997-07-09 1998-01-14 Crane, B.R.,Siegel, L.M.,Getzoff, E.D. Structures of the siroheme- and Fe4S4-containing active center of sulfite reductase in different states of oxidation: heme activation via reduction-gated exogenous ligand exchange. Biochemistry 1997 36 12101 12119 2GEP SULFITE REDUCTASE HEMOPROTEIN, OXIDIZED, SIROHEME FEIII [4FE-4S] +2,SULFITE COMPLEX 1997-07-10 1998-01-14 Crane, B.R.,Siegel, L.M.,Getzoff, E.D. Probing the catalytic mechanism of sulfite reductase by X-ray crystallography: structures of the Escherichia coli hemoprotein in complex with substrates, inhibitors, intermediates, and products. Biochemistry 1997 36 12120 12137 3AOP SULFITE REDUCTASE HEMOPROTEIN PHOTOREDUCED WITH PROFLAVINE EDTA, SIROHEME FEII,[4FE-4S] +1, PHOSPHATE BOUND 1997-07-09 1998-01-14 Crane, B.R.,Siegel, L.M.,Getzoff, E.D. Structures of the siroheme- and Fe4S4-containing active center of sulfite reductase in different states of oxidation: heme activation via reduction-gated exogenous ligand exchange. Biochemistry 1997 36 12101 12119 3GEO SULFITE REDUCTASE HEMOPROTEIN NITRITE COMPLEX 1997-07-10 1998-01-14 Crane, B.R.,Siegel, L.M.,Getzoff, E.D. Probing the catalytic mechanism of sulfite reductase by X-ray crystallography: structures of the Escherichia coli hemoprotein in complex with substrates, inhibitors, intermediates, and products. Biochemistry 1997 36 12120 12137 4AOP SULFITE REDUCTASE HEMOPROTEIN PARTIALLY PHOTOREDUCED WITH PROFLAVINE EDTA, PHOSPHATE PARTIALLY BOUND 1997-07-09 1998-01-14 Crane, B.R.,Siegel, L.M.,Getzoff, E.D. Structures of the siroheme- and Fe4S4-containing active center of sulfite reductase in different states of oxidation: heme activation via reduction-gated exogenous ligand exchange. Biochemistry 1997 36 12101 12119 4GEP SULFITE REDUCTASE HEMOPROTEIN CYANIDE COMPLEX REDUCED WITH CRII EDTA 1997-07-10 1998-01-14 Crane, B.R.,Siegel, L.M.,Getzoff, E.D. Probing the catalytic mechanism of sulfite reductase by X-ray crystallography: structures of the Escherichia coli hemoprotein in complex with substrates, inhibitors, intermediates, and products. Biochemistry 1997 36 12120 12137 5AOP SULFITE REDUCTASE STRUCTURE REDUCED WITH CRII EDTA, 5-COORDINATE SIROHEME, SIROHEME FEII, [4FE-4S] +1 1997-07-10 1998-01-14 Crane, B.R.,Siegel, L.M.,Getzoff, E.D. Structures of the siroheme- and Fe4S4-containing active center of sulfite reductase in different states of oxidation: heme activation via reduction-gated exogenous ligand exchange. Biochemistry 1997 36 12101 12119 5GEP SULFITE REDUCTASE HEMOPROTEIN CARBON MONOXIDE COMPLEX REDUCED WITH CRII EDTA 1997-07-10 1998-01-14 Crane, B.R.,Siegel, L.M.,Getzoff, E.D. Probing the catalytic mechanism of sulfite reductase by X-ray crystallography: structures of the Escherichia coli hemoprotein in complex with substrates, inhibitors, intermediates, and products. Biochemistry 1997 36 12120 12137 6GEP SULFITE REDUCTASE HEMOPROTEIN NITRIC OXIDE COMPLEX REDUCED WITH PROFLAVINE EDTA 1997-07-10 1998-01-14 Crane, B.R.,Siegel, L.M.,Getzoff, E.D. Probing the catalytic mechanism of sulfite reductase by X-ray crystallography: structures of the Escherichia coli hemoprotein in complex with substrates, inhibitors, intermediates, and products. Biochemistry 1997 36 12120 12137 1AP5 TYR34->PHE MUTANT OF HUMAN MITOCHONDRIAL MANGANESE SUPEROXIDE DISMUTASE 1997-07-24 1998-01-28 Guan, Y.,Hickey, M.J.,Borgstahl, G.E.,Hallewell, R.A.,Lepock, J.R.,O'Connor, D.,Hsieh, Y.,Nick, H.S.,Silverman, D.N.,Tainer, J.A. Crystal structure of Y34F mutant human mitochondrial manganese superoxide dismutase and the functional role of tyrosine 34. Biochemistry 1998 37 4722 4730 1UCH DEUBIQUITINATING ENZYME UCH-L3 (HUMAN) AT 1.8 ANGSTROM RESOLUTION 1997-10-06 1998-01-28 Johnston, S.C.,Larsen, C.N.,Cook, W.J.,Wilkinson, K.D.,Hill, C.P. Crystal structure of a deubiquitinating enzyme (human UCH-L3) at 1.8 A resolution. EMBO J. 1997 16 3787 3796 1AXS MATURE OXY-COPE CATALYTIC ANTIBODY WITH HAPTEN 1997-10-20 1998-02-04 Ulrich, H.D.,Mundorff, E.,Santarsiero, B.D.,Driggers, E.M.,Stevens, R.C.,Schultz, P.G. The interplay between binding energy and catalysis in the evolution of a catalytic antibody. Nature 1997 389 271 275 1IXG PHOSPHATE-BINDING PROTEIN MUTANT WITH THR 141 REPLACED BY ASP (T141D), COMPLEXED WITH PHOSPATE 1996-08-01 1998-02-04 Wang, Z.,Luecke, H.,Yao, N.,Quiocho, F.A. A low energy short hydrogen bond in very high resolution structures of protein receptor--phosphate complexes. Nat.Struct.Biol. 1997 4 519 522 1IXH PHOSPHATE-BINDING PROTEIN (PBP) COMPLEXED WITH PHOSPHATE 1996-08-01 1998-02-04 Wang, Z.,Luecke, H.,Yao, N.,Quiocho, F.A. A low energy short hydrogen bond in very high resolution structures of protein receptor--phosphate complexes. Nat.Struct.Biol. 1997 4 519 522 365D STRUCTURAL BASIS FOR G C RECOGNITION IN THE DNA MINOR GROOVE 1997-12-17 1998-02-05 Kielkopf, C.L.,Baird, E.E.,Dervan, P.B.,Rees, D.C. Structural basis for G.C recognition in the DNA minor groove. Nat.Struct.Biol. 1998 5 104 109 1AWU CYPA COMPLEXED WITH HVGPIA (PSEUDO-SYMMETRIC MONOMER) 1997-10-05 1998-03-18 Vajdos, F.F.,Yoo, S.,Houseweart, M.,Sundquist, W.I.,Hill, C.P. Crystal structure of cyclophilin A complexed with a binding site peptide from the HIV-1 capsid protein. Protein Sci. 1997 6 2297 2307 1AWV CYPA COMPLEXED WITH HVGPIA 1997-10-05 1998-03-18 Vajdos, F.F.,Yoo, S.,Houseweart, M.,Sundquist, W.I.,Hill, C.P. Crystal structure of cyclophilin A complexed with a binding site peptide from the HIV-1 capsid protein. Protein Sci. 1997 6 2297 2307 5EAU 5-EPI-ARISTOLOCHENE SYNTHASE FROM NICOTIANA TABACUM 1997-12-11 1998-04-08 Starks, C.M.,Back, K.,Chappell, J.,Noel, J.P. Structural basis for cyclic terpene biosynthesis by tobacco 5-epi-aristolochene synthase. Science 1997 277 1815 1820 1AY2 STRUCTURE OF THE FIBER-FORMING PROTEIN PILIN AT 2.6 ANGSTROMS RESOLUTION 1997-11-13 1998-04-29 Parge, H.E.,Forest, K.T.,Hickey, M.J.,Christensen, D.A.,Getzoff, E.D.,Tainer, J.A. Structure of the fibre-forming protein pilin at 2.6 A resolution. Nature 1995 378 32 38 1SOX SULFITE OXIDASE FROM CHICKEN LIVER 1997-12-31 1998-04-29 Kisker, C.,Schindelin, H.,Pacheco, A.,Wehbi, W.A.,Garrett, R.M.,Rajagopalan, K.V.,Enemark, J.H.,Rees, D.C. Molecular basis of sulfite oxidase deficiency from the structure of sulfite oxidase. Cell(Cambridge,Mass.) 1997 91 973 983 2CKB STRUCTURE OF THE 2C/KB/DEV8 COMPLEX 1998-01-14 1998-04-29 Garcia, K.C.,Degano, M.,Pease, L.R.,Huang, M.,Peterson, P.A.,Teyton, L.,Wilson, I.A. Structural basis of plasticity in T cell receptor recognition of a self peptide-MHC antigen. Science 1998 279 1166 1172 1A4J DIELS ALDER CATALYTIC ANTIBODY GERMLINE PRECURSOR 1998-01-30 1998-05-13 Romesberg, F.E.,Spiller, B.,Schultz, P.G.,Stevens, R.C. Immunological origins of binding and catalysis in a Diels-Alderase antibody. Science 1998 279 1929 1933 1A4K DIELS ALDER CATALYTIC ANTIBODY WITH TRANSITION STATE ANALOGUE 1998-01-30 1998-05-13 Romesberg, F.E.,Spiller, B.,Schultz, P.G.,Stevens, R.C. Immunological origins of binding and catalysis in a Diels-Alderase antibody. Science 1998 279 1929 1933 2PIL 10048019 Crystallographic Structure of Phosphorylated Pilin from Neisseria: Phosphoserine Sites Modify Type IV Pilus Surface Chemistry 1998-03-02 1998-05-27 Forest, K.T.,Dunham, S.A.,Koomey, M.,Tainer, J.A. Crystallographic structure reveals phosphorylated pilin from Neisseria: phosphoserine sites modify type IV pilus surface chemistry and fibre morphology. Mol.Microbiol. 1999 31 743 752 1HKB CRYSTAL STRUCTURE OF RECOMBINANT HUMAN BRAIN HEXOKINASE TYPE I COMPLEXED WITH GLUCOSE AND GLUCOSE-6-PHOSPHATE 1997-12-01 1998-06-03 Aleshin, A.E.,Zeng, C.,Bourenkov, G.P.,Bartunik, H.D.,Fromm, H.J.,Honzatko, R.B. The mechanism of regulation of hexokinase: new insights from the crystal structure of recombinant human brain hexokinase complexed with glucose and glucose-6-phosphate. Structure 1998 6 39 50 1TOH TYROSINE HYDROXYLASE CATALYTIC AND TETRAMERIZATION DOMAINS FROM RAT 1997-06-04 1998-06-03 Goodwill, K.E.,Sabatier, C.,Marks, C.,Raag, R.,Fitzpatrick, P.F.,Stevens, R.C. Crystal structure of tyrosine hydroxylase at 2.3 A and its implications for inherited neurodegenerative diseases. Nat.Struct.Biol. 1997 4 578 585 1JDB 10089390 CARBAMOYL PHOSPHATE SYNTHETASE FROM ESCHERICHIA COLI 1997-03-25 1998-06-17 Thoden, J.B.,Raushel, F.M.,Benning, M.M.,Rayment, I.,Holden, H.M. The structure of carbamoyl phosphate synthetase determined to 2.1 A resolution. Acta Crystallogr.,Sect.D 1999 55 8 24 1SKN THE BINDING DOMAIN OF SKN-1 IN COMPLEX WITH DNA: A NEW DNA-BINDING MOTIF 1998-03-30 1998-06-24 Rupert, P.B.,Daughdrill, G.W.,Bowerman, B.,Matthews, B.W. A new DNA-binding motif in the Skn-1 binding domain-DNA complex. Nat.Struct.Biol. 1998 5 484 491 1UAA E. COLI REP HELICASE/DNA COMPLEX 1997-06-30 1998-07-09 Korolev, S.,Hsieh, J.,Gauss, G.H.,Lohman, T.M.,Waksman, G. Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep helicase bound to single-stranded DNA and ADP. Cell(Cambridge,Mass.) 1997 90 635 647 1BOQ PRO REGION C-TERMINUS: PROTEASE ACTIVE SITE INTERACTIONS ARE CRITICAL IN CATALYZING THE FOLDING OF ALPHA-LYTIC PROTEASE 1998-08-05 1998-08-12 Peters, R.J.,Shiau, A.K.,Sohl, J.L.,Anderson, D.E.,Tang, G.,Silen, J.L.,Agard, D.A. Pro region C-terminus:protease active site interactions are critical in catalyzing the folding of alpha-lytic protease. Biochemistry 1998 37 12058 12067 2GAR A PH-DEPENDENT STABLIZATION OF AN ACTIVE SITE LOOP OBSERVED FROM LOW AND HIGH PH CRYSTAL STRUCTURES OF MUTANT MONOMERIC GLYCINAMIDE RIBONUCLEOTIDE TRANSFORMYLASE 1998-05-13 1998-08-12 Su, Y.,Yamashita, M.M.,Greasley, S.E.,Mullen, C.A.,Shim, J.H.,Jennings, P.A.,Benkovic, S.J.,Wilson, I.A. A pH-dependent stabilization of an active site loop observed from low and high pH crystal structures of mutant monomeric glycinamide ribonucleotide transformylase at 1.8 to 1.9 A. J.Mol.Biol. 1998 281 485 499 3CHB CHOLERA TOXIN B-PENTAMER COMPLEXED WITH GM1 PENTASACCHARIDE 1998-03-24 1998-08-12 Merritt, E.A.,Kuhn, P.,Sarfaty, S.,Erbe, J.L.,Holmes, R.K.,Hol, W.G. The 1.25 A resolution refinement of the cholera toxin B-pentamer: evidence of peptide backbone strain at the receptor-binding site. J.Mol.Biol. 1998 282 1043 1059 3GAR A PH-DEPENDENT STABLIZATION OF AN ACTIVE SITE LOOP OBSERVED FROM LOW AND HIGH PH CRYSTAL STRUCTURES OF MUTANT MONOMERIC GLYCINAMIDE RIBONUCLEOTIDE TRANSFORMYLASE 1998-05-13 1998-08-12 Su, Y.,Yamashita, M.M.,Greasley, S.E.,Mullen, C.A.,Shim, J.H.,Jennings, P.A.,Benkovic, S.J.,Wilson, I.A. A pH-dependent stabilization of an active site loop observed from low and high pH crystal structures of mutant monomeric glycinamide ribonucleotide transformylase at 1.8 to 1.9 A. J.Mol.Biol. 1998 281 485 499 1BCC CYTOCHROME BC1 COMPLEX FROM CHICKEN 1998-03-23 1998-08-19 Zhang, Z.,Huang, L.,Shulmeister, V.M.,Chi, Y.I.,Kim, K.K.,Hung, L.W.,Crofts, A.R.,Berry, E.A.,Kim, S.H. Electron transfer by domain movement in cytochrome bc1. Nature 1998 392 677 684 1BP3 THE XRAY STRUCTURE OF A GROWTH HORMONE-PROLACTIN RECEPTOR COMPLEX 1998-08-12 1998-08-19 Somers, W.,Ultsch, M.,De Vos, A.M.,Kossiakoff, A.A. The X-ray structure of a growth hormone-prolactin receptor complex. Nature 1994 372 478 481 6CP4 P450CAM D251N MUTANT 1998-05-28 1998-09-16 Vidakovic, M.,Sligar, S.G.,Li, H.,Poulos, T.L. Understanding the role of the essential Asp251 in cytochrome p450cam using site-directed mutagenesis, crystallography, and kinetic solvent isotope effect. Biochemistry 1998 37 9211 9219 1BU7 10051560 CRYOGENIC STRUCTURE OF CYTOCHROME P450BM-3 HEME DOMAIN 1998-09-14 1998-09-23 Sevrioukova, I.F.,Li, H.,Zhang, H.,Peterson, J.A.,Poulos, T.L. Structure of a cytochrome P450-redox partner electron-transfer complex. Proc.Natl.Acad.Sci.USA 1999 96 1863 1868 1BG2 HUMAN UBIQUITOUS KINESIN MOTOR DOMAIN 1998-06-04 1998-10-14 Kull, F.J.,Sablin, E.P.,Lau, R.,Fletterick, R.J.,Vale, R.D. Crystal structure of the kinesin motor domain reveals a structural similarity to myosin. Nature 1996 380 550 555 1DDN DIPHTHERIA TOX REPRESSOR (C102D MUTANT)/TOX DNA OPERATOR COMPLEX 1998-06-23 1998-10-14 White, A.,Ding, X.,vanderSpek, J.C.,Murphy, J.R.,Ringe, D. Structure of the metal-ion-activated diphtheria toxin repressor/tox operator complex. Nature 1998 394 502 506 1PIN PIN1 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM HOMO SAPIENS 1998-06-21 1998-10-14 Ranganathan, R.,Lu, K.P.,Hunter, T.,Noel, J.P. Structural and functional analysis of the mitotic rotamase Pin1 suggests substrate recognition is phosphorylation dependent. Cell(Cambridge,Mass.) 1997 89 875 886 1A81 CRYSTAL STRUCTURE OF THE TANDEM SH2 DOMAIN OF THE SYK KINASE BOUND TO A DUALLY TYROSINE-PHOSPHORYLATED ITAM 1998-03-31 1998-10-21 Futterer, K.,Wong, J.,Grucza, R.A.,Chan, A.C.,Waksman, G. Structural basis for Syk tyrosine kinase ubiquity in signal transduction pathways revealed by the crystal structure of its regulatory SH2 domains bound to a dually phosphorylated ITAM peptide. J.Mol.Biol. 1998 281 523 537 1OAK CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR (VWF) A1 DOMAIN IN COMPLEX WITH THE FUNCTION BLOCKING NMC-4 FAB 1997-12-18 1998-10-21 Celikel, R.,Varughese, K.I.,Madhusudan,Yoshioka, A.,Ware, J.,Ruggeri, Z.M. Crystal structure of the von Willebrand factor A1 domain in complex with the function blocking NMC-4 Fab. Nat.Struct.Biol. 1998 5 189 194 1AV8 RIBONUCLEOTIDE REDUCTASE R2 SUBUNIT FROM E. COLI 1997-09-30 1998-10-28 Tong, W.,Burdi, D.,Riggs-Gelasco, P.,Chen, S.,Edmondson, D.,Huynh, B.H.,Stubbe, J.,Han, S.,Arvai, A.,Tainer, J.A. Characterization of Y122F R2 of Escherichia coli ribonucleotide reductase by time-resolved physical biochemical methods and X-ray crystallography. Biochemistry 1998 37 5840 5848 1AXT IMMUNE VERSUS NATURAL SELECTION: ANTIBODY ALDOLASES WITH THE RATES OF NATURAL ENZYMES 1997-10-20 1998-10-28 Barbas 3rd., C.F.,Heine, A.,Zhong, G.,Hoffmann, T.,Gramatikova, S.,Bjornestedt, R.,List, B.,Anderson, J.,Stura, E.A.,Wilson, I.A.,Lerner, R.A. Immune versus natural selection: antibody aldolases with enzymic rates but broader scope. Science 1997 278 2085 2092 2AV8 Y122F MUTANT OF RIBONUCLEOTIDE REDUCTASE FROM ESCHERICHIA COLI 1997-09-30 1998-10-28 Tong, W.,Burdi, D.,Riggs-Gelasco, P.,Chen, S.,Edmondson, D.,Huynh, B.H.,Stubbe, J.,Han, S.,Arvai, A.,Tainer, J.A. Characterization of Y122F R2 of Escherichia coli ribonucleotide reductase by time-resolved physical biochemical methods and X-ray crystallography. Biochemistry 1998 37 5840 5848 1IAO CLASS II MHC I-AD IN COMPLEX WITH OVALBUMIN PEPTIDE 323-339 1998-03-13 1998-11-04 Scott, C.A.,Peterson, P.A.,Teyton, L.,Wilson, I.A. Crystal structures of two I-Ad-peptide complexes reveal that high affinity can be achieved without large anchor residues. Immunity 1998 8 319 329 1HKC RECOMBINANT HUMAN HEXOKINASE TYPE I COMPLEXED WITH GLUCOSE AND PHOSPHATE 1998-07-01 1998-11-11 Aleshin, A.E.,Zeng, C.,Bartunik, H.D.,Fromm, H.J.,Honzatko, R.B. Regulation of hexokinase I: crystal structure of recombinant human brain hexokinase complexed with glucose and phosphate. J.Mol.Biol. 1998 282 345 357 2NIP NITROGENASE IRON PROTEIN FROM AZOTOBACTER VINELANDII 1998-05-11 1998-11-11 Schlessman, J.L.,Woo, D.,Joshua-Tor, L.,Howard, J.B.,Rees, D.C. Conformational variability in structures of the nitrogenase iron proteins from Azotobacter vinelandii and Clostridium pasteurianum. J.Mol.Biol. 1998 280 669 685 1B0M 10631981 ACONITASE R644Q:FLUOROCITRATE COMPLEX 1998-11-11 1998-11-18 Lloyd, S.J.,Lauble, H.,Prasad, G.S.,Stout, C.D. The mechanism of aconitase: 1.8 A resolution crystal structure of the S642a:citrate complex. Protein Sci. 1999 8 2655 2662 2IAD CLASS II MHC I-AD IN COMPLEX WITH AN INFLUENZA HEMAGGLUTININ PEPTIDE 126-138 1998-03-13 1998-11-18 Scott, C.A.,Peterson, P.A.,Teyton, L.,Wilson, I.A. Crystal structures of two I-Ad-peptide complexes reveal that high affinity can be achieved without large anchor residues. Immunity 1998 8 319 329 1E2O CATALYTIC DOMAIN FROM DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE 1998-05-26 1998-12-02 Knapp, J.E.,Mitchell, D.T.,Yazdi, M.A.,Ernst, S.R.,Reed, L.J.,Hackert, M.L. Crystal structure of the truncated cubic core component of the Escherichia coli 2-oxoglutarate dehydrogenase multienzyme complex. J.Mol.Biol. 1998 280 655 668 1QBL FAB E8 (FABE8A) X-RAY STRUCTURE AT 2.26 ANGSTROM RESOLUTION 1998-04-29 1998-12-02 Mylvaganam, S.E.,Paterson, Y.,Getzoff, E.D. Structural basis for the binding of an anti-cytochrome c antibody to its antigen: crystal structures of FabE8-cytochrome c complex to 1.8 A resolution and FabE8 to 2.26 A resolution. J.Mol.Biol. 1998 281 301 322 1WEJ IGG1 FAB FRAGMENT (OF E8 ANTIBODY) COMPLEXED WITH HORSE CYTOCHROME C AT 1.8 A RESOLUTION 1998-03-26 1998-12-09 Mylvaganam, S.E.,Paterson, Y.,Getzoff, E.D. Structural basis for the binding of an anti-cytochrome c antibody to its antigen: crystal structures of FabE8-cytochrome c complex to 1.8 A resolution and FabE8 to 2.26 A resolution. J.Mol.Biol. 1998 281 301 322 1B07 CRK SH3 DOMAIN COMPLEXED WITH PEPTOID INHIBITOR 1998-11-17 1999-01-06 Nguyen, J.T.,Turck, C.W.,Cohen, F.E.,Zuckermann, R.N.,Lim, W.A. Exploiting the basis of proline recognition by SH3 and WW domains: design of N-substituted inhibitors. Science 1998 282 2088 2092 1BV4 APO-MANNOSE-BINDING PROTEIN-C 1998-09-22 1999-01-13 Ng, K.K.,Park-Snyder, S.,Weis, W.I. Ca2+-dependent structural changes in C-type mannose-binding proteins. Biochemistry 1998 37 17965 17976 1T1D CRYSTAL STRUCTURE OF THE TETRAMERIZATION DOMAIN OF THE SHAKER POTASSIUM CHANNEL 1998-09-22 1999-01-13 Bixby, K.A.,Nanao, M.H.,Shen, N.V.,Kreusch, A.,Bellamy, H.,Pfaffinger, P.J.,Choe, S. Zn2+-binding and molecular determinants of tetramerization in voltage-gated K+ channels. Nat.Struct.Biol. 1999 6 38 43 3KVT TETRAMERIZATION DOMAIN FROM AKV3.1 (SHAW-SUBFAMILY) VOLTAGE-GATED POTASSIUM CHANNEL 1998-09-25 1999-01-13 Bixby, K.A.,Nanao, M.H.,Shen, N.V.,Kreusch, A.,Bellamy, H.,Pfaffinger, P.J.,Choe, S. Zn2+-binding and molecular determinants of tetramerization in voltage-gated K+ channels. Nat.Struct.Biol. 1999 6 38 43 4KTQ BINARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM T. AQUATICUS BOUND TO A PRIMER/TEMPLATE DNA 1998-09-09 1999-01-13 Li, Y.,Korolev, S.,Waksman, G. Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation. EMBO J. 1998 17 7514 7525 2BCE CHOLESTEROL ESTERASE FROM BOS TAURUS 1998-01-28 1999-02-02 Chen, J.C.,Miercke, L.J.,Krucinski, J.,Starr, J.R.,Saenz, G.,Wang, X.,Spilburg, C.A.,Lange, L.G.,Ellsworth, J.L.,Stroud, R.M. Structure of bovine pancreatic cholesterol esterase at 1.6 A: novel structural features involved in lipase activation. Biochemistry 1998 37 5107 5117 1A3L CATALYSIS OF A DISFAVORED REACTION: AN ANTIBODY EXO DIELS-ALDERASE-TSA-INHIBITOR COMPLEX AT 1.95 A RESOLUTION 1998-01-22 1999-02-16 Heine, A.,Stura, E.A.,Yli-Kauhaluoma, J.T.,Gao, C.,Deng, Q.,Beno, B.R.,Houk, K.N.,Janda, K.D.,Wilson, I.A. An antibody exo Diels-Alderase inhibitor complex at 1.95 angstrom resolution. Science 1998 279 1934 1940 1UGH CRYSTAL STRUCTURE OF HUMAN URACIL-DNA GLYCOSYLASE IN COMPLEX WITH A PROTEIN INHIBITOR: PROTEIN MIMICRY OF DNA 1999-02-05 1999-02-16 Mol, C.D.,Arvai, A.S.,Sanderson, R.J.,Slupphaug, G.,Kavli, B.,Krokan, H.E.,Mosbaugh, D.W.,Tainer, J.A. Crystal structure of human uracil-DNA glycosylase in complex with a protein inhibitor: protein mimicry of DNA. Cell(Cambridge,Mass.) 1995 82 701 708 1BVY 10051560 COMPLEX OF THE HEME AND FMN-BINDING DOMAINS OF THE CYTOCHROME P450(BM-3) 1998-09-21 1999-02-23 Sevrioukova, I.F.,Li, H.,Zhang, H.,Peterson, J.A.,Poulos, T.L. Structure of a cytochrome P450-redox partner electron-transfer complex. Proc.Natl.Acad.Sci.USA 1999 96 1863 1868 1VPP COMPLEX BETWEEN VEGF AND A RECEPTOR BLOCKING PEPTIDE 1998-10-09 1999-02-23 Wiesmann, C.,Christinger, H.W.,Cochran, A.G.,Cunningham, B.C.,Fairbrother, W.J.,Keenan, C.J.,Meng, G.,de Vos, A.M. Crystal structure of the complex between VEGF and a receptor-blocking peptide. Biochemistry 1998 37 17765 17772 2APS 10656823 CU/ZN SUPEROXIDE DISMUTASE FROM ACTINOBACILLUS PLEUROPNEUMONIAE 1999-02-11 1999-02-25 Forest, K.T.,Langford, P.R.,Kroll, J.S.,Getzoff, E.D. Cu,Zn superoxide dismutase structure from a microbial pathogen establishes a class with a conserved dimer interface. J.Mol.Biol. 2000 296 145 153 4SKN A NUCLEOTIDE-FLIPPING MECHANISM FROM THE STRUCTURE OF HUMAN URACIL-DNA GLYCOSYLASE BOUND TO DNA 1999-02-20 1999-02-26 Slupphaug, G.,Mol, C.D.,Kavli, B.,Arvai, A.S.,Krokan, H.E.,Tainer, J.A. A nucleotide-flipping mechanism from the structure of human uracil-DNA glycosylase bound to DNA. Nature 1996 384 87 92 429D 10074945 CRYSTAL STRUCTURE OF A LEADZYME; METAL BINDING AND IMPLICATIONS FOR CATALYSIS 1998-09-29 1999-03-01 Wedekind, J.E.,McKay, D.B. Crystal structure of a lead-dependent ribozyme revealing metal binding sites relevant to catalysis. Nat.Struct.Biol. 1999 6 261 268 1A5U PYRUVATE KINASE COMPLEX WITH BIS MG-ATP-NA-OXALATE 1998-02-18 1999-03-02 Larsen, T.M.,Benning, M.M.,Rayment, I.,Reed, G.H. Structure of the bis(Mg2+)-ATP-oxalate complex of the rabbit muscle pyruvate kinase at 2.1 A resolution: ATP binding over a barrel. Biochemistry 1998 37 6247 6255 1GYQ 10200252 CRYSTAL STRUCTURE OF GLYCOSOMAL GLYCERALDEHYDE FROM LEISHMANIA MEXICANA IN COMPLEX WITH N6-BENZYL-NAD 1999-03-05 1999-03-16 Aronov, A.M.,Suresh, S.,Buckner, F.S.,Van Voorhis, W.C.,Verlinde, C.L.,Opperdoes, F.R.,Hol, W.G.,Gelb, M.H. Structure-based design of submicromolar, biologically active inhibitors of trypanosomatid glyceraldehyde-3-phosphate dehydrogenase. Proc.Natl.Acad.Sci.USA 1999 96 4273 4278 25C8 10353817 CATALYTIC ANTIBODY 5C8, FAB-HAPTEN COMPLEX 1998-03-18 1999-03-23 Gruber, K.,Zhou, B.,Houk, K.N.,Lerner, R.A.,Shevlin, C.G.,Wilson, I.A. Structural basis for antibody catalysis of a disfavored ring closure reaction. Biochemistry 1999 38 7062 7074 3ERD HUMAN ESTROGEN RECEPTOR ALPHA LIGAND-BINDING DOMAIN IN COMPLEX WITH DIETHYLSTILBESTROL AND A GLUCOCORTICOID RECEPTOR INTERACTING PROTEIN 1 NR BOX II PEPTIDE 1999-03-31 1999-04-08 Shiau, A.K.,Barstad, D.,Loria, P.M.,Cheng, L.,Kushner, P.J.,Agard, D.A.,Greene, G.L. The structural basis of estrogen receptor/coactivator recognition and the antagonism of this interaction by tamoxifen. Cell(Cambridge,Mass.) 1998 95 927 937 1A49 BIS MG-ATP-K-OXALATE COMPLEX OF PYRUVATE KINASE 1998-02-12 1999-04-20 Larsen, T.M.,Benning, M.M.,Rayment, I.,Reed, G.H. Structure of the bis(Mg2+)-ATP-oxalate complex of the rabbit muscle pyruvate kinase at 2.1 A resolution: ATP binding over a barrel. Biochemistry 1998 37 6247 6255 1BXR 10029528 STRUCTURE OF CARBAMOYL PHOSPHATE SYNTHETASE COMPLEXED WITH THE ATP ANALOG AMPPNP 1998-10-08 1999-04-20 Thoden, J.B.,Wesenberg, G.,Raushel, F.M.,Holden, H.M. Carbamoyl phosphate synthetase: closure of the B-domain as a result of nucleotide binding. Biochemistry 1999 38 2347 2357 1QA7 10603326 CRYSTAL COMPLEX OF THE 3C PROTEINASE FROM HEPATITIS A VIRUS WITH ITS INHIBITOR AND IMPLICATIONS FOR THE POLYPROTEIN PROCESSING IN HAV 1999-04-15 1999-04-20 Bergmann, E.M.,Cherney, M.M.,Mckendrick, J.,Frormann, S.,Luo, C.,Malcolm, B.A.,Vederas, J.C.,James, M.N. Crystal structure of an inhibitor complex of the 3C proteinase from hepatitis A virus (HAV) and implications for the polyprotein processing in HAV. Virology 1999 265 153 163 3PAH HUMAN PHENYLALANINE HYDROXYLASE CATALYTIC DOMAIN DIMER WITH BOUND ADRENALINE INHIBITOR 1998-08-20 1999-04-27 Erlandsen, H.,Flatmark, T.,Stevens, R.C.,Hough, E. Crystallographic analysis of the human phenylalanine hydroxylase catalytic domain with bound catechol inhibitors at 2.0 A resolution. Biochemistry 1998 37 15638 15646 3PRO ALPHA-LYTIC PROTEASE COMPLEXED WITH C-TERMINAL TRUNCATED PRO REGION 1998-08-26 1999-04-27 Sauter, N.K.,Mau, T.,Rader, S.D.,Agard, D.A. Structure of alpha-lytic protease complexed with its pro region. Nat.Struct.Biol. 1998 5 945 950 4PAH HUMAN PHENYLALANINE HYDROXYLASE CATALYTIC DOMAIN DIMER WITH BOUND NOR-ADRENALINE INHIBITOR 1998-08-20 1999-04-27 Erlandsen, H.,Flatmark, T.,Stevens, R.C.,Hough, E. Crystallographic analysis of the human phenylalanine hydroxylase catalytic domain with bound catechol inhibitors at 2.0 A resolution. Biochemistry 1998 37 15638 15646 3HTS 10331875 HEAT SHOCK TRANSCRIPTION FACTOR/DNA COMPLEX 1998-11-16 1999-04-29 Littlefield, O.,Nelson, H.C. A new use for the 'wing' of the 'winged' helix-turn-helix motif in the HSF-DNA cocrystal. Nat.Struct.Biol. 1999 6 464 470 1QAU 10221915 UNEXPECTED MODES OF PDZ DOMAIN SCAFFOLDING REVEALED BY STRUCTURE OF NNOS-SYNTROPHIN COMPLEX 1999-03-29 1999-05-04 Hillier, B.J.,Christopherson, K.S.,Prehoda, K.E.,Bredt, D.S.,Lim, W.A. Unexpected modes of PDZ domain scaffolding revealed by structure of nNOS-syntrophin complex. Science 1999 284 812 815 1QAV 10221915 Unexpected Modes of PDZ Domain Scaffolding Revealed by Structure of NNOS-Syntrophin Complex 1999-03-30 1999-05-04 Hillier, B.J.,Christopherson, K.S.,Prehoda, K.E.,Bredt, D.S.,Lim, W.A. Unexpected modes of PDZ domain scaffolding revealed by structure of nNOS-syntrophin complex. Science 1999 284 812 815 1SSP WILD-TYPE URACIL-DNA GLYCOSYLASE BOUND TO URACIL-CONTAINING DNA 1999-04-28 1999-05-06 Parikh, S.S.,Mol, C.D.,Slupphaug, G.,Bharati, S.,Krokan, H.E.,Tainer, J.A. Base excision repair initiation revealed by crystal structures and binding kinetics of human uracil-DNA glycosylase with DNA. EMBO J. 1998 17 5214 5226 2SSP LEUCINE-272-ALANINE URACIL-DNA GLYCOSYLASE BOUND TO ABASIC SITE-CONTAINING DNA 1999-04-28 1999-05-06 Parikh, S.S.,Mol, C.D.,Slupphaug, G.,Bharati, S.,Krokan, H.E.,Tainer, J.A. Base excision repair initiation revealed by crystal structures and binding kinetics of human uracil-DNA glycosylase with DNA. EMBO J. 1998 17 5214 5226 1BVB HEME-PACKING MOTIFS REVEALED BY THE CRYSTAL STRUCTURE OF CYTOCHROME C554 FROM NITROSOMONAS EUROPAEA 1998-09-16 1999-05-18 Iverson, T.M.,Arciero, D.M.,Hsu, B.T.,Logan, M.S.,Hooper, A.B.,Rees, D.C. Heme packing motifs revealed by the crystal structure of the tetra-heme cytochrome c554 from Nitrosomonas europaea. Nat.Struct.Biol. 1998 5 1005 1012 3NSE BOVINE ENOS, H4B-FREE, SEITU COMPLEX 1998-09-23 1999-05-18 Raman, C.S.,Li, H.,Martasek, P.,Kral, V.,Masters, B.S.,Poulos, T.L. Crystal structure of constitutive endothelial nitric oxide synthase: a paradigm for pterin function involving a novel metal center. Cell(Cambridge,Mass.) 1998 95 939 950 1P35 10205157 CRYSTAL STRUCTURE OF BACULOVIRUS P35 1998-09-18 1999-06-01 Fisher, A.J.,Cruz, W.,Zoog, S.J.,Schneider, C.L.,Friesen, P.D. Crystal structure of baculovirus P35: role of a novel reactive site loop in apoptotic caspase inhibition. EMBO J. 1999 18 2031 2039 1NT3 HUMAN NEUROTROPHIN-3 1999-05-17 1999-06-06 Butte, M.J.,Hwang, P.K.,Mobley, W.C.,Fletterick, R.J. Crystal structure of neurotrophin-3 homodimer shows distinct regions are used to bind its receptors. Biochemistry 1998 37 16846 16852 1FZF 10074346 CRYSTAL STRUCTURE OF FRAGMENT DOUBLE-D FROM HUMAN FIBRIN WITH THE PEPTIDE LIGAND GLY-HIS-ARG-PRO-AMIDE 1998-12-28 1999-06-08 Everse, S.J.,Spraggon, G.,Veerapandian, L.,Doolittle, R.F. Conformational changes in fragments D and double-D from human fibrin(ogen) upon binding the peptide ligand Gly-His-Arg-Pro-amide. Biochemistry 1999 38 2941 2946 1QQ0 10924115 COBALT SUBSTITUTED CARBONIC ANHYDRASE FROM METHANOSARCINA THERMOPHILA 1999-06-10 1999-06-24 Iverson, T.M.,Alber, B.E.,Kisker, C.,Ferry, J.G.,Rees, D.C. A closer look at the active site of gamma-class carbonic anhydrases: high-resolution crystallographic studies of the carbonic anhydrase from Methanosarcina thermophila. Biochemistry 2000 39 9222 9231 1QRE 10924115 A CLOSER LOOK AT THE ACTIVE SITE OF GAMMA-CARBONIC ANHYDRASES: HIGH RESOLUTION CRYSTALLOGRAPHIC STUDIES OF THE CARBONIC ANHYDRASE FROM METHANOSARCINA THERMOPHILA 1999-06-13 1999-06-25 Iverson, T.M.,Alber, B.E.,Kisker, C.,Ferry, J.G.,Rees, D.C. A closer look at the active site of gamma-class carbonic anhydrases: high-resolution crystallographic studies of the carbonic anhydrase from Methanosarcina thermophila. Biochemistry 2000 39 9222 9231 1QRF 10924115 A CLOSER LOOK AT THE ACTIVE SITE OF GAMMA-CARBONIC ANHYDRASES: HIGH RESOLUTION CRYSTALLOGRAPHIC STUDIES OF THE CARBONIC ANHYDRASE FROM METHANOSARCINA THERMOPHILA 1999-06-13 1999-06-25 Iverson, T.M.,Alber, B.E.,Kisker, C.,Ferry, J.G.,Rees, D.C. A closer look at the active site of gamma-class carbonic anhydrases: high-resolution crystallographic studies of the carbonic anhydrase from Methanosarcina thermophila. Biochemistry 2000 39 9222 9231 1QRG 10924115 A CLOSER LOOK AND THE ACTIVE SITE OF GAMMA-CARBONIC ANHYDRASES: HIGH RESOLUTION CRYSTALLOGRAPHIC STUDIES OF THE CARBONIC ANHYDRASE FROM METHANOSARCINA THERMOPHILA 1999-06-13 1999-06-25 Iverson, T.M.,Alber, B.E.,Kisker, C.,Ferry, J.G.,Rees, D.C. A closer look at the active site of gamma-class carbonic anhydrases: high-resolution crystallographic studies of the carbonic anhydrase from Methanosarcina thermophila. Biochemistry 2000 39 9222 9231 1QRL 10924115 A CLOSER LOOK AT THE ACTIVE SITE OF GAMMA-CARBONIC ANHYDRASES: HIGH RESOLUTION CRYSTALLOGRAPHIC STUDIES OF THE CARBONIC ANHYDRASE FROM METHANOSARCINA THERMOPHILA 1999-06-15 1999-06-25 Iverson, T.M.,Alber, B.E.,Kisker, C.,Ferry, J.G.,Rees, D.C. A closer look at the active site of gamma-class carbonic anhydrases: high-resolution crystallographic studies of the carbonic anhydrase from Methanosarcina thermophila. Biochemistry 2000 39 9222 9231 1B9F 10413462 MOBILITY OF AN HIV-1 INTEGRASE ACTIVE SITE LOOP IS CORRELATED WITH CATALYTIC ACTIVITY 1999-02-11 1999-07-19 Greenwald, J.,Le, V.,Butler, S.L.,Bushman, F.D.,Choe, S. The mobility of an HIV-1 integrase active site loop is correlated with catalytic activity. Biochemistry 1999 38 8892 8898 1QB7 10393170 CRYSTAL STRUCTURES OF ADENINE PHOSPHORIBOSYLTRANSFERASE FROM LEISHMANIA DONOVANI. 1999-04-30 1999-07-21 Phillips, C.L.,Ullman, B.,Brennan, R.G.,Hill, C.P. Crystal structures of adenine phosphoribosyltransferase from Leishmania donovani. EMBO J. 1999 18 3533 3545 1QB8 10393170 CRYSTAL STRUCTURES OF ADENINE PHOSPHORIBOSYLTRANSFERASE FROM LEISHMANIA DONOVANI 1999-04-30 1999-07-21 Phillips, C.L.,Ullman, B.,Brennan, R.G.,Hill, C.P. Crystal structures of adenine phosphoribosyltransferase from Leishmania donovani. EMBO J. 1999 18 3533 3545 1FUN SUPEROXIDE DISMUTASE MUTANT WITH LYS 136 REPLACED BY GLU, CYS 6 REPLACED BY ALA AND CYS 111 REPLACED BY SER (K136E, C6A, C111S) 1998-07-23 1999-07-23 Fisher, C.L.,Cabelli, D.E.,Hallewell, R.A.,Beroza, P.,Lo, T.P.,Getzoff, E.D.,Tainer, J.A. Computational, pulse-radiolytic, and structural investigations of lysine-136 and its role in the electrostatic triad of human Cu,Zn superoxide dismutase. Proteins 1997 29 103 112 1CE8 10428826 CARBAMOYL PHOSPHATE SYNTHETASE FROM ESCHERICHIS COLI WITH COMPLEXED WITH THE ALLOSTERIC LIGAND IMP 1999-03-18 1999-07-26 Thoden, J.B.,Raushel, F.M.,Wesenberg, G.,Holden, H.M. The binding of inosine monophosphate to Escherichia coli carbamoyl phosphate synthetase. J.Biol.Chem. 1999 274 22502 22507 1CMX 10406793 STRUCTURAL BASIS FOR THE SPECIFICITY OF UBIQUITIN C-TERMINAL HYDROLASES 1999-05-12 1999-07-27 Johnston, S.C.,Riddle, S.M.,Cohen, R.E.,Hill, C.P. Structural basis for the specificity of ubiquitin C-terminal hydrolases. EMBO J. 1999 18 3877 3887 1NG1 10426959 N AND GTPASE DOMAINS OF THE SIGNAL SEQUENCE RECOGNITION PROTEIN FFH FROM THERMUS AQUATICUS 1998-04-30 1999-07-30 Freymann, D.M.,Keenan, R.J.,Stroud, R.M.,Walter, P. Functional changes in the structure of the SRP GTPase on binding GDP and Mg2+GDP. Nat.Struct.Biol. 1999 6 793 801 3NG1 10426959 N AND GTPASE DOMAINS OF THE SIGNAL SEQUENCE RECOGNITION PROTEIN FFH FROM THERMUS AQUATICUS 1998-09-13 1999-07-30 Freymann, D.M.,Keenan, R.J.,Stroud, R.M.,Walter, P. Functional changes in the structure of the SRP GTPase on binding GDP and Mg2+GDP. Nat.Struct.Biol. 1999 6 793 801 2BCC STIGMATELLIN-BOUND CYTOCHROME BC1 COMPLEX FROM CHICKEN 1998-09-18 1999-08-02 Zhang, Z.,Huang, L.,Shulmeister, V.M.,Chi, Y.I.,Kim, K.K.,Hung, L.W.,Crofts, A.R.,Berry, E.A.,Kim, S.H. Electron Transfer by Domain Movement in Cytochrome Bc1 Nature 1998 392 677 684 1BQ6 10426957 CHALCONE SYNTHASE FROM ALFALFA WITH COENZYME A 1998-08-21 1999-08-11 Ferrer, J.L.,Jez, J.M.,Bowman, M.E.,Dixon, R.A.,Noel, J.P. Structure of chalcone synthase and the molecular basis of plant polyketide biosynthesis. Nat.Struct.Biol. 1999 6 775 784 1C96 10631981 S642A:CITRATE COMPLEX OF ACONITASE 1999-07-31 1999-08-12 Lloyd, S.J.,Lauble, H.,Prasad, G.S.,Stout, C.D. The mechanism of aconitase: 1.8 A resolution crystal structure of the S642a:citrate complex. Protein Sci. 1999 8 2655 2662 1C97 10631981 S642A:ISOCITRATE COMPLEX OF ACONITASE 1999-07-31 1999-08-12 Lloyd, S.J.,Lauble, H.,Prasad, G.S.,Stout, C.D. The mechanism of aconitase: 1.8 A resolution crystal structure of the S642a:citrate complex. Protein Sci. 1999 8 2655 2662 43C9 10438624 CRYSTALLOGRAPHIC STRUCTURE OF THE ESTEROLYTIC AND AMIDOLYTIC 43C9 ANTIBODY 1999-03-10 1999-08-18 Thayer, M.M.,Olender, E.H.,Arvai, A.S.,Koike, C.K.,Canestrelli, I.L.,Stewart, J.D.,Benkovic, S.J.,Getzoff, E.D.,Roberts, V.A. Structural basis for amide hydrolysis catalyzed by the 43C9 antibody. J.Mol.Biol. 1999 291 329 345 43CA 10438624 CRYSTALLOGRAPHIC STRUCTURE OF THE ESTEROLYTIC AND AMIDOLYTIC 43C9 ANTIBODY WITH BOUND P-NITROPHENOL 1999-03-10 1999-08-18 Thayer, M.M.,Olender, E.H.,Arvai, A.S.,Koike, C.K.,Canestrelli, I.L.,Stewart, J.D.,Benkovic, S.J.,Getzoff, E.D.,Roberts, V.A. Structural basis for amide hydrolysis catalyzed by the 43C9 antibody. J.Mol.Biol. 1999 291 329 345 1MUY CATALYTIC DOMAIN OF MUTY FROM ESCHERICHIA COLI 1998-08-20 1999-08-20 Guan, Y.,Manuel, R.C.,Arvai, A.S.,Parikh, S.S.,Mol, C.D.,Miller, J.H.,Lloyd, S.,Tainer, J.A. MutY catalytic core, mutant and bound adenine structures define specificity for DNA repair enzyme superfamily. Nat.Struct.Biol. 1998 5 1058 1064 1MUN CATALYTIC DOMAIN OF MUTY FROM ESCHERICHIA COLI D138N MUTANT 1998-08-26 1999-08-26 Guan, Y.,Manuel, R.C.,Arvai, A.S.,Parikh, S.S.,Mol, C.D.,Miller, J.H.,Lloyd, S.,Tainer, J.A. MutY catalytic core, mutant and bound adenine structures define specificity for DNA repair enzyme superfamily. Nat.Struct.Biol. 1998 5 1058 1064 2TOH TYROSINE HYDROXYLASE CATALYTIC AND TETRAMERIZATION DOMAINS FROM RAT 1998-08-26 1999-08-26 Goodwill, K.E.,Sabatier, C.,Stevens, R.C. Crystal structure of tyrosine hydroxylase with bound cofactor analogue and iron at 2.3 A resolution: self-hydroxylation of Phe300 and the pterin-binding site. Biochemistry 1998 37 13437 13445 1CW1 10623532 CRYSTAL STRUCTURE OF ISOCITRATE DEHYDROGENASE MUTANT K230M BOUND TO ISOCITRATE AND MN2+ 1999-08-25 1999-09-01 Cherbavaz, D.B.,Lee, M.E.,Stroud, R.M.,Koshland Jr., D.E. Active site water molecules revealed in the 2.1 A resolution structure of a site-directed mutant of isocitrate dehydrogenase. J.Mol.Biol. 2000 295 377 385 1CW4 10623532 CRYSTAL STRUCTURE OF K230M ISOCITRATE DEHYDROGENASE IN COMPLEX WITH ALPHA-KETOGLUTARATE 1999-08-25 1999-09-01 Cherbavaz, D.B.,Lee, M.E.,Stroud, R.M.,Koshland Jr., D.E. Active site water molecules revealed in the 2.1 A resolution structure of a site-directed mutant of isocitrate dehydrogenase. J.Mol.Biol. 2000 295 377 385 3BTA CRYSTAL STRUCTURE OF BOTULINUM NEUROTOXIN SEROTYPE A 1998-08-12 1999-10-01 Lacy, D.B.,Tepp, W.,Cohen, A.C.,DasGupta, B.R.,Stevens, R.C. Crystal structure of botulinum neurotoxin type A and implications for toxicity. Nat.Struct.Biol. 1998 5 898 902 1QHU 10504726 MAMMALIAN BLOOD SERUM HAEMOPEXIN DEGLYCOSYLATED AND IN COMPLEX WITH ITS LIGAND HAEM 1999-05-27 1999-10-06 Paoli, M.,Anderson, B.F.,Baker, H.M.,Morgan, W.T.,Smith, A.,Baker, E.N. Crystal structure of hemopexin reveals a novel high-affinity heme site formed between two beta-propeller domains. Nat.Struct.Biol. 1999 6 926 931 2PAH TETRAMERIC HUMAN PHENYLALANINE HYDROXYLASE 1998-05-26 1999-10-06 Fusetti, F.,Erlandsen, H.,Flatmark, T.,Stevens, R.C. Structure of tetrameric human phenylalanine hydroxylase and its implications for phenylketonuria. J.Biol.Chem. 1998 273 16962 16967 1TC1 A 1.4 ANGSTROM CRYSTAL STRUCTURE FOR THE HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE OF TRYPANOSOMA CRUZI 1998-09-30 1999-10-07 Focia, P.J.,Craig III, S.P.,Nieves-Alicea, R.,Fletterick, R.J.,Eakin, A.E. A 1.4 A crystal structure for the hypoxanthine phosphoribosyltransferase of Trypanosoma cruzi. Biochemistry 1998 37 15066 15075 1QK4 10545170 TOXOPLASMA GONDII HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE IMP COMPLEX 1999-07-09 1999-10-17 Heroux, A.,White, E.L.,Ross, L.J.,Borhani, D.W. Crystal Structures of the Toxoplasma Gondii Hypoxanthine-Guanine Phosphoribosyltransferase Gmp and -Imp Complexes: Comparison of Purine Binding Interactions with the Xmp Complex Biochemistry 1999 38 14485 0 1D0G 10549288 CRYSTAL STRUCTURE OF DEATH RECEPTOR 5 (DR5) BOUND TO APO2L/TRAIL 1999-09-09 1999-10-22 Hymowitz, S.G.,Christinger, H.W.,Fuh, G.,Ultsch, M.,O'Connell, M.,Kelley, R.F.,Ashkenazi, A.,de Vos, A.M. Triggering cell death: the crystal structure of Apo2L/TRAIL in a complex with death receptor 5. Mol.Cell 1999 4 563 571 1BY7 10368272 HUMAN PLASMINOGEN ACTIVATOR INHIBITOR-2. LOOP (66-98) DELETION MUTANT 1998-10-27 1999-10-24 Harrop, S.J.,Jankova, L.,Coles, M.,Jardine, D.,Whittaker, J.S.,Gould, A.R.,Meister, A.,King, G.C.,Mabbutt, B.C.,Curmi, P.M. The crystal structure of plasminogen activator inhibitor 2 at 2.0 A resolution: implications for serpin function. Structure Fold.Des. 1999 7 43 54 1CJM 10543947 HUMAN SULT1A3 WITH SULFATE BOUND 1999-04-18 1999-11-10 Bidwell, L.M.,McManus, M.E.,Gaedigk, A.,Kakuta, Y.,Negishi, M.,Pedersen, L.,Martin, J.L. Crystal structure of human catecholamine sulfotransferase. J.Mol.Biol. 1999 293 521 530 1D9Y NEISSERIA GONORRHOEAE FERRIC BINDING PROTEIN 1999-10-30 1999-11-17 McRee, D.E.,Bruns, C.M.,Williams, P.A.,Mietzner, T.A.,Nunn, R. Structural Basis of Iron Uptake in the Pathogen Neisseria gonorrhoeae To be Published 0 0 0 0 1B1B IRON DEPENDENT REGULATOR 1998-11-19 1999-12-03 Pohl, E.,Holmes, R.K.,Hol, W.G. Crystal structure of the iron-dependent regulator (IdeR) from Mycobacterium tuberculosis shows both metal binding sites fully occupied. J.Mol.Biol. 1999 285 1145 1156 1DF1 10562539 MURINE INOSOXY DIMER WITH ISOTHIOUREA BOUND IN THE ACTIVE SITE 1999-11-16 1999-12-08 Crane, B.R.,Rosenfeld, R.J.,Arvai, A.S.,Ghosh, D.K.,Ghosh, S.,Tainer, J.A.,Stuehr, D.J.,Getzoff, E.D. N-terminal domain swapping and metal ion binding in nitric oxide synthase dimerization. EMBO J. 1999 18 6271 6281 1QOM 10562539 MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER (DELTA 65) WITH SWAPPED N-TERMINAL HOOK 1999-11-15 1999-12-15 Crane, B.R.,Rosenfeld, R.A.,Arvai, A.S.,Ghosh, D.K.,Ghosh, S.,Tainer, J.A.,Stuehr, D.J.,Getzoff, E.D. N-Terminal Domain Swapping and Metal Ion Binding in Nitric Oxide Synthase Dimerization Embo J. 1999 18 6271 0 1B4L 10026301 15 ATMOSPHERE OXYGEN YEAST CU/ZN SUPEROXIDE DISMUTASE ROOM TEMPERATURE (298K) STRUCTURE 1998-12-22 1999-12-23 Hart, P.J.,Balbirnie, M.M.,Ogihara, N.L.,Nersissian, A.M.,Weiss, M.S.,Valentine, J.S.,Eisenberg, D. A structure-based mechanism for copper-zinc superoxide dismutase. Biochemistry 1999 38 2167 2178 1ERN NATIVE STRUCTURE OF THE EXTRACELLULAR DOMAIN OF ERYTHROPOIETIN (EPO) RECEPTOR [EBP] 1999-01-11 2000-01-07 Livnah, O.,Stura, E.A.,Middleton, S.A.,Johnson, D.L.,Jolliffe, L.K.,Wilson, I.A. Crystallographic evidence for preformed dimers of erythropoietin receptor before ligand activation. Science 1999 283 987 990 2NSI 10409685 HUMAN INDUCIBLE NITRIC OXIDE SYNTHASE, ZN-FREE, SEITU COMPLEX 1999-01-11 2000-01-07 Li, H.,Raman, C.S.,Glaser, C.B.,Blasko, E.,Young, T.A.,Parkinson, J.F.,Whitlow, M.,Poulos, T.L. Crystal structures of zinc-free and -bound heme domain of human inducible nitric-oxide synthase. Implications for dimer stability and comparison with endothelial nitric-oxide synthase. J.Biol.Chem. 1999 274 21276 21284 1D0Z 10617631 DICTYOSTELIUM MYOSIN S1DC (MOTOR DOMAIN FRAGMENT) COMPLEXED WITH P-NITROPHENYL AMINOETHYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE. 1999-09-15 2000-01-12 Gulick, A.M.,Bauer, C.B.,Thoden, J.B.,Pate, E.,Yount, R.G.,Rayment, I. X-ray structures of the Dictyostelium discoideum myosin motor domain with six non-nucleotide analogs. J.Biol.Chem. 2000 275 398 408 1D1A 10617631 DICTYOSTELIUM MYOSIN S1DC (MOTOR DOMAIN FRAGMENT) COMPLEXED WITH O,P-DINITROPHENYL AMINOETHYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE. 1999-09-15 2000-01-12 Gulick, A.M.,Bauer, C.B.,Thoden, J.B.,Pate, E.,Yount, R.G.,Rayment, I. X-ray structures of the Dictyostelium discoideum myosin motor domain with six non-nucleotide analogs. J.Biol.Chem. 2000 275 398 408 1D1B 10617631 DICTYOSTELIUM MYOSIN S1DC (MOTOR DOMAIN FRAGMENT) COMPLEXED WITH O,P-DINITROPHENYL AMINOPROPYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE. 1999-09-15 2000-01-12 Gulick, A.M.,Bauer, C.B.,Thoden, J.B.,Pate, E.,Yount, R.G.,Rayment, I. X-ray structures of the Dictyostelium discoideum myosin motor domain with six non-nucleotide analogs. J.Biol.Chem. 2000 275 398 408 1D1C 10617631 DICTYOSTELIUM MYOSIN S1DC (MOTOR DOMAIN FRAGMENT) COMPLEXED WITH N-METHYL-O-NITROPHENYL AMINOETHYLDIPHOSPHATE BERYLLIUM TRIFLUORIDE. 1999-09-15 2000-01-12 Gulick, A.M.,Bauer, C.B.,Thoden, J.B.,Pate, E.,Yount, R.G.,Rayment, I. X-ray structures of the Dictyostelium discoideum myosin motor domain with six non-nucleotide analogs. J.Biol.Chem. 2000 275 398 408 1D4O 10581554 CRYSTAL STRUCTURE OF TRANSHYDROGENASE DOMAIN III AT 1.2 ANGSTROMS RESOLUTION 1999-10-04 2000-01-20 Prasad, G.S.,Sridhar, V.,Yamaguchi, M.,Hatefi, Y.,Stout, C.D. Crystal structure of transhydrogenase domain III at 1.2 A resolution. Nat.Struct.Biol. 1999 6 1126 1131 1D5B 10651626 UNLIGANDED MATURE OXY-COPE CATALYTIC ANTIBODY 1999-10-06 2000-02-09 Mundorff, E.C.,Hanson, M.A.,Varvak, A.,Ulrich, H.,Schultz, P.G.,Stevens, R.C. Conformational effects in biological catalysis: an antibody-catalyzed oxy-cope rearrangement. Biochemistry 2000 39 627 632 1DGF 10656833 HUMAN ERYTHROCYTE CATALASE 1999-11-24 2000-02-11 Putnam, C.D.,Arvai, A.S.,Bourne, Y.,Tainer, J.A. Active and inhibited human catalase structures: ligand and NADPH binding and catalytic mechanism. J.Mol.Biol. 2000 296 295 309 1DGG 10656833 HUMAN ERYTHROCYTE CATALSE CYANIDE COMPLEX 1999-11-24 2000-02-17 Putnam, C.D.,Arvai, A.S.,Bourne, Y.,Tainer, J.A. Active and inhibited human catalase structures: ligand and NADPH binding and catalytic mechanism. J.Mol.Biol. 2000 296 295 309 1DGH 10656833 HUMAN ERYTHROCYTE CATALASE 3-AMINO-1,2,4-TRIAZOLE COMPLEX 1999-11-24 2000-02-17 Putnam, C.D.,Arvai, A.S.,Bourne, Y.,Tainer, J.A. Active and inhibited human catalase structures: ligand and NADPH binding and catalytic mechanism. J.Mol.Biol. 2000 296 295 309 1DT1 11152119 THERMUS THERMOPHILUS CYTOCHROME C552 SYNTHESIZED BY ESCHERICHIA COLI 2000-01-10 2000-02-18 Fee, J.A.,Chen, Y.,Todaro, T.R.,Bren, K.L.,Patel, K.M.,Hill, M.G.,Gomez-Moran, E.,Loehr, T.M.,Ai, J.,Thony-Meyer, L.,Williams, P.A.,Stura, E.,Sridhar, V.,McRee, D.E. Integrity of thermus thermophilus cytochrome c552 synthesized by Escherichia coli cells expressing the host-specific cytochrome c maturation genes, ccmABCDEFGH: biochemical, spectral, and structural characterization of the recombinant protein. Protein Sci. 2000 9 2074 2084 1EFI 11173465 HEAT-LABILE ENTEROTOXIN B-PENTAMER COMPLEXED WITH PARA-AMINOPHENYL-ALPHA-D-GALACTOPYRANOSIDE 2000-02-08 2000-02-23 Fan, E.,Merritt, E.A.,Zhang, Z.,Pickens, J.C.,Roach, C.,Ahn, M.,Hol, W.G. Exploration of the GM1 receptor-binding site of heat-labile enterotoxin and cholera toxin by phenyl-ring-containing galactose derivatives. Acta Crystallogr.,Sect.D 2001 57 201 212 1C1E 10600746 CRYSTAL STRUCTURE OF A DIELS-ALDERASE CATALYTIC ANTIBODY 1E9 IN COMPLEX WITH ITS HAPTEN 1999-07-22 2000-03-01 Xu, J.,Deng, Q.,Chen, J.,Houk, K.N.,Bartek, J.,Hilvert, D.,Wilson, I.A. Evolution of shape complementarity and catalytic efficiency from a primordial antibody template. Science 1999 286 2345 2348 1D5N 10686094 CRYSTAL STRUCTURE OF E. COLI MNSOD AT 100K 1999-10-08 2000-03-02 Borgstahl, G.E.,Pokross, M.,Chehab, R.,Sekher, A.,Snell, E.H. Cryo-trapping the six-coordinate, distorted-octahedral active site of manganese superoxide dismutase. J.Mol.Biol. 2000 296 951 959 1CD5 10378272 GLUCOSAMINE-6-PHOSPHATE DEAMINASE FROM E.COLI, T CONFORMER 1999-03-05 2000-03-06 Horjales, E.,Altamirano, M.M.,Calcagno, M.L.,Garratt, R.C.,Oliva, G. The allosteric transition of glucosamine-6-phosphate deaminase: the structure of the T state at 2.3 A resolution. Structure Fold.Des. 1999 7 527 537 1DQA 10698924 COMPLEX OF THE CATALYTIC PORTION OF HUMAN HMG-COA REDUCTASE WITH HMG, COA, AND NADP+ 1999-12-30 2000-03-08 Istvan, E.S.,Palnitkar, M.,Buchanan, S.K.,Deisenhofer, J. Crystal structure of the catalytic portion of human HMG-CoA reductase: insights into regulation of activity and catalysis. EMBO J. 2000 19 819 830 1TC2 TERNARY SUBSTRATE COMPLEX OF THE HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE FROM TRYPANOSOMA CRUZI 1998-11-04 2000-03-08 Focia, P.J.,Craig III, S.P.,Eakin, A.E. Approaching the transition state in the crystal structure of a phosphoribosyltransferase. Biochemistry 1998 37 17120 17127 1DM5 10704197 ANNEXIN XII E105K HOMOHEXAMER CRYSTAL STRUCTURE 1999-12-13 2000-03-20 Cartailler, J.P.,Haigler, H.T.,Luecke, H. Annexin XII E105K crystal structure: identification of a pH-dependent switch for mutant hexamerization. Biochemistry 2000 39 2475 2483 1DMW 10694386 CRYSTAL STRUCTURE OF DOUBLE TRUNCATED HUMAN PHENYLALANINE HYDROXYLASE WITH BOUND 7,8-DIHYDRO-L-BIOPTERIN 1999-12-15 2000-03-24 Erlandsen, H.,Bjorgo, E.,Flatmark, T.,Stevens, R.C. Crystal structure and site-specific mutagenesis of pterin-bound human phenylalanine hydroxylase. Biochemistry 2000 39 2208 2217 1EM1 10852710 X-RAY CRYSTAL STRUCTURE FOR HUMAN MANGANESE SUPEROXIDE DISMUTASE, Q143A 2000-03-14 2000-03-24 Leveque, V.J.,Stroupe, M.E.,Lepock, J.R.,Cabelli, D.E.,Tainer, J.A.,Nick, H.S.,Silverman, D.N. Multiple replacements of glutamine 143 in human manganese superoxide dismutase: effects on structure, stability, and catalysis. Biochemistry 2000 39 7131 7137 1EO4 ECORV BOUND TO MN2+ AND COGNATE DNA CONTAINING A 3'S SUBSTITION AT THE CLEAVAGE SITE 2000-03-21 2000-04-04 Horton, N.C.,Connolly, B.A.,Perona, J.J. Inhibition of EcoRV Endonuclease by Deoxyribo-3'-S-phosphorothiolates: A High-Resolution X-ray Crystallographic Study J.Am.Chem.Soc. 2000 122 3314 3324 1EON ECORV BOUND TO 3'-S-PHOSPHOROTHIOLATE DNA AND CA2+ 2000-03-23 2000-04-04 Horton, N.C.,Connolly, B.A.,Perona, J.J. Inhibition of EcoRV Endonuclease by Deoxyribo-3'-S-phosphorothiolates: A High-Resolution X-ray Crystallographic Study J.Am.Chem.Soc. 2000 122 3314 3324 1CI7 10529228 TERNARY COMPLEX OF THYMIDYLATE SYNTHASE FROM PNEUMOCYSTIS CARINII 1999-04-08 2000-04-10 Anderson, A.C.,O'Neil, R.H.,DeLano, W.L.,Stroud, R.M. The structural mechanism for half-the-sites reactivity in an enzyme, thymidylate synthase, involves a relay of changes between subunits. Biochemistry 1999 38 13829 13836 1EH7 10747039 METHYLATED HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE 2000-02-18 2000-04-12 Daniels, D.S.,Mol, C.D.,Arvai, A.S.,Kanugula, S.,Pegg, A.E.,Tainer, J.A. Active and alkylated human AGT structures: a novel zinc site, inhibitor and extrahelical base binding. EMBO J. 2000 19 1719 1730 1EH8 10747039 BENZYLATED HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE 2000-02-18 2000-04-12 Daniels, D.S.,Mol, C.D.,Arvai, A.S.,Kanugula, S.,Pegg, A.E.,Tainer, J.A. Active and alkylated human AGT structures: a novel zinc site, inhibitor and extrahelical base binding. EMBO J. 2000 19 1719 1730 1EMJ 10805771 URACIL-DNA GLYCOSYLASE BOUND TO DNA CONTAINING A 4'-THIO-2'DEOXYURIDINE ANALOG PRODUCT 2000-03-16 2000-05-16 Parikh, S.S.,Walcher, G.,Jones, G.D.,Slupphaug, G.,Krokan, H.E.,Blackburn, G.M.,Tainer, J.A. Uracil-DNA glycosylase-DNA substrate and product structures: conformational strain promotes catalytic efficiency by coupled stereoelectronic effects. Proc.Natl.Acad.Sci.USA 2000 97 5083 5088 1DN2 10678837 FC FRAGMENT OF HUMAN IGG1 IN COMPLEX WITH AN ENGINEERED 13 RESIDUE PEPTIDE DCAWHLGELVWCT-NH2 1999-12-15 2000-05-17 DeLano, W.L.,Ultsch, M.H.,de Vos, A.M.,Wells, J.A. Convergent solutions to binding at a protein-protein interface. Science 2000 287 1279 1283 1DJ0 10625422 THE CRYSTAL STRUCTURE OF E. COLI PSEUDOURIDINE SYNTHASE I AT 1.5 ANGSTROM RESOLUTION 1999-11-30 2000-05-31 Foster, P.G.,Huang, L.,Santi, D.V.,Stroud, R.M. The structural basis for tRNA recognition and pseudouridine formation by pseudouridine synthase I. Nat.Struct.Biol. 2000 7 23 27 1F2Q CRYSTAL STRUCTURE OF THE HUMAN HIGH-AFFINITY IGE RECEPTOR 2000-05-28 2000-06-08 Garman, S.C.,Kinet, J.P.,Jardetzky, T.S. Crystal structure of the human high-affinity IgE receptor. Cell(Cambridge,Mass.) 1998 95 951 961 1EGK 10864501 CRYSTAL STRUCTURE OF A NUCLEIC ACID FOUR-WAY JUNCTION 2000-02-15 2000-06-26 Nowakowski, J.,Shim, P.J.,Stout, C.D.,Joyce, G.F. Alternative conformations of a nucleic acid four-way junction. J.Mol.Biol. 2000 300 93 102 1ES0 10775108 CRYSTAL STRUCTURE OF THE MURINE CLASS II ALLELE I-A(G7) COMPLEXED WITH THE GLUTAMIC ACID DECARBOXYLASE (GAD65) PEPTIDE 207-220 2000-04-07 2000-06-28 Corper, A.L.,Stratmann, T.,Apostolopoulos, V.,Scott, C.A.,Garcia, K.C.,Kang, A.S.,Wilson, I.A.,Teyton, L. A structural framework for deciphering the link between I-Ag7 and autoimmune diabetes. Science 2000 288 505 511 1QU7 10466731 FOUR HELICAL-BUNDLE STRUCTURE OF THE CYTOPLASMIC DOMAIN OF A SERINE CHEMOTAXIS RECEPTOR 1999-07-07 2000-07-12 Kim, K.K.,Yokota, H.,Kim, S.H. Four-helical-bundle structure of the cytoplasmic domain of a serine chemotaxis receptor. Nature 1999 400 787 792 1F9I 11063584 CRYSTAL STRUCTURE OF THE PHOTOACTIVE YELLOW PROTEIN MUTANT Y42F 2000-07-10 2000-07-21 Brudler, R.,Meyer, T.E.,Genick, U.K.,Devanathan, S.,Woo, T.T.,Millar, D.P.,Gerwert, K.,Cusanovich, M.A.,Tollin, G.,Getzoff, E.D. Coupling of hydrogen bonding to chromophore conformation and function in photoactive yellow protein. Biochemistry 2000 39 13478 13486 1F2U 10892749 Crystal Structure of RAD50 ABC-ATPase 2000-05-29 2000-08-02 Hopfner, K.P.,Karcher, A.,Shin, D.S.,Craig, L.,Arthur, L.M.,Carney, J.P.,Tainer, J.A. Structural biology of Rad50 ATPase: ATP-driven conformational control in DNA double-strand break repair and the ABC-ATPase superfamily. Cell(Cambridge,Mass.) 2000 101 789 800 1C3G 10997899 S. CEREVISIAE HEAT SHOCK PROTEIN 40 SIS1 1999-07-27 2000-08-03 Sha, B.,Lee, S.,Cyr, D.M. The crystal structure of the peptide-binding fragment from the yeast Hsp40 protein Sis1. Structure 2000 8 799 807 1F51 10997904 A TRANSIENT INTERACTION BETWEEN TWO PHOSPHORELAY PROTEINS TRAPPED IN A CRYSTAL LATTICE REVEALS THE MECHANISM OF MOLECULAR RECOGNITION AND PHOSPHOTRANSFER IN SINGAL TRANSDUCTION 2000-06-11 2000-08-23 Zapf, J.,Sen, U.,Madhusudan, M.,Hoch, J.A.,Varughese, K.I. A transient interaction between two phosphorelay proteins trapped in a crystal lattice reveals the mechanism of molecular recognition and phosphotransfer in signal transduction. Structure Fold.Des. 2000 8 851 862 1QB3 10997903 CRYSTAL STRUCTURE OF THE CELL CYCLE REGULATORY PROTEIN CKS1 1999-04-30 2000-08-31 Bourne, Y.,Watson, M.H.,Arvai, A.S.,Bernstein, S.L.,Reed, S.I.,Tainer, J.A. Crystal structure and mutational analysis of the Saccharomyces cerevisiae cell cycle regulatory protein Cks1: implications for domain swapping, anion binding and protein interactions. Structure Fold.Des. 2000 8 841 850 1EYP 10966651 CHALCONE ISOMERASE 2000-05-08 2000-09-06 Jez, J.M.,Bowman, M.E.,Dixon, R.A.,Noel, J.P. Structure and mechanism of the evolutionarily unique plant enzyme chalcone isomerase. Nat.Struct.Biol. 2000 7 786 791 1F7D 10957629 CRYSTAL STRUCTURES OF FELINE IMMUNODEFICIENCY VIRUS DUTP PYROPHOSPHATASE AND ITS NUCLEOTIDE COMPLEXES IN THREE CRYSTAL FORMS 2000-06-26 2000-09-06 Prasad, G.S.,Stura, E.A.,Elder, J.H.,Stout, C.D. Structures of feline immunodeficiency virus dUTP pyrophosphatase and its nucleotide complexes in three crystal forms. Acta Crystallogr.,Sect.D 2000 56 1100 1109 1FI8 10966646 RAT GRANZYME B [N66Q] COMPLEXED TO ECOTIN [81-84 IEPD] 2000-08-03 2000-09-13 Waugh, S.M.,Harris, J.L.,Fletterick, R.,Craik, C.S. The structure of the pro-apoptotic protease granzyme B reveals the molecular determinants of its specificity Nat.Struct.Biol. 2000 7 762 765 1FT5 11372197 CRYSTAL STRUCTURE OF THE OXIDIZED STATE OF CYTOCHROME C554 FROM NITROSOMONAS EUROPAEA 2000-09-11 2000-09-20 Iverson, T.M.,Arciero, D.M.,Hooper, A.B.,Rees, D.C. High-resolution structures of the oxidized and reduced states of cytochrome c554 from Nitrosomonas europaea. J.Biol.Inorg.Chem. 2001 6 390 397 1FT6 11372197 REDUCED STATE OF CYTOCHROME C554 FROM NITROSOMONAS EUROPAEA 2000-09-11 2000-09-20 Iverson, T.M.,Arciero, D.M.,Hooper, A.B.,Rees, D.C. High-resolution structures of the oxidized and reduced states of cytochrome c554 from Nitrosomonas europaea. J.Biol.Inorg.Chem. 2001 6 390 397 1D8W 10891278 L-RHAMNOSE ISOMERASE 1999-10-26 2000-09-27 Korndorfer, I.P.,Fessner, W.D.,Matthews, B.W. The structure of rhamnose isomerase from Escherichia coli and its relation with xylose isomerase illustrates a change between inter and intra-subunit complementation during evolution. J.Mol.Biol. 2000 300 917 933 1DT6 10678174 STRUCTURE OF MAMMALIAN CYTOCHROME P450 2C5 2000-01-11 2000-09-27 Williams, P.A.,Cosme, J.,Sridhar, V.,Johnson, E.F.,McRee, D.E. Mammalian microsomal cytochrome P450 monooxygenase: structural adaptations for membrane binding and functional diversity. Mol.Cell 2000 5 121 131 1QMQ 10557259 Optical detection of cytochrome P450 by sensitizer-linked substrates 1999-10-05 2000-10-06 Dmochowski, I.J.,Crane, B.R.,Wilker, J.J.,Winkler, J.R.,Gray, H.B. Optical Detection of Cytochrome P450 by Sensitizer-Linked Substrates Proc.Natl.Acad.Sci.USA 1999 96 12987 0 1FT9 11017196 STRUCTURE OF THE REDUCED (FEII) CO-SENSING PROTEIN FROM R. RUBRUM 2000-09-12 2000-10-09 Lanzilotta, W.N.,Schuller, D.J.,Thorsteinsson, M.V.,Kerby, R.L.,Roberts, G.P.,Poulos, T.L. Structure of the CO sensing transcription activator CooA. Nat.Struct.Biol. 2000 7 876 880 1FNS 11017197 CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR (VWF) A1 DOMAIN I546V MUTANT IN COMPLEX WITH THE FUNCTION BLOCKING FAB NMC4 2000-08-23 2000-10-18 Celikel, R.,Ruggeri, Z.M.,Varughese, K.I. von Willebrand factor conformation and adhesive function is modulated by an internalized water molecule. Nat.Struct.Biol. 2000 7 881 884 1F4T 10859321 THERMOPHILIC P450: CYP119 FROM SULFOLOBUS SOLFACTARICUS WITH 4-PHENYLIMIDAZOLE BOUND 2000-06-09 2000-10-23 Yano, J.K.,Koo, L.S.,Schuller, D.J.,Li, H.,Ortiz de Montellano, P.R.,Poulos, T.L. Crystal structure of a thermophilic cytochrome P450 from the archaeon Sulfolobus solfataricus. J.Biol.Chem. 2000 275 31086 31092 1D1W 11051558 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH 2-AMINOTHIAZOLINE (H4B BOUND) 1999-09-21 2000-10-25 Li, H.,Raman, C.S.,Martasek, P.,Kral, V.,Masters, B.S.,Poulos, T.L. Mapping the active site polarity in structures of endothelial nitric oxide synthase heme domain complexed with isothioureas. J.Inorg.Biochem. 2000 81 133 139 1D8T 10625477 CRYSTAL STRUCTURE OF ELONGATION FACTOR, TU (EF-TU-MGGDP) COMPLEXED WITH GE2270A, A THIAZOLYL PEPTIDE ANTIBIOTIC 1999-10-25 2000-10-25 Heffron, S.E.,Jurnak, F. Structure of an EF-TU Complex with a Thiazolyl Peptide Antibiotic Determined at 2.35 A Resolution: Atomic Basis for Ge2270A Inhibition of EF-TU. Biochemistry 2000 39 37 0 1ED4 11051558 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH IPITU (H4B FREE) 2000-01-26 2000-10-25 Li, H.,Raman, C.S.,Martasek, P.,Kral, V.,Masters, B.S.,Poulos, T.L. Mapping the active site polarity in structures of endothelial nitric oxide synthase heme domain complexed with isothioureas. J.Inorg.Biochem. 2000 81 133 139 1DDL 10966774 DESMODIUM YELLOW MOTTLE TYMOVIRUS 1999-11-10 2000-10-30 Larson, S.B.,Day, J.,Canady, M.A.,Greenwood, A.,McPherson, A. Refined structure of desmodium yellow mottle tymovirus at 2.7 A resolution. J.Mol.Biol. 2000 301 625 642 1EXQ 10890912 CRYSTAL STRUCTURE OF THE HIV-1 INTEGRASE CATALYTIC CORE DOMAIN 2000-05-03 2000-11-03 Chen, J.C.,Krucinski, J.,Miercke, L.J.,Finer-Moore, J.S.,Tang, A.H.,Leavitt, A.D.,Stroud, R.M. Crystal structure of the HIV-1 integrase catalytic core and C-terminal domains: a model for viral DNA binding. Proc.Natl.Acad.Sci.USA 2000 97 8233 8238 1F5J 11053833 CRYSTAL STRUCTURE OF XYNB, A HIGHLY THERMOSTABLE BETA-1,4-XYLANASE FROM DICTYOGLOMUS THERMOPHILUM RT46B.1, AT 1.8 A RESOLUTION 2000-07-26 2000-11-15 McCarthy, A.A.,Morris, D.D.,Bergquist, P.L.,Baker, E.N. Structure of XynB, a highly thermostable beta-1,4-xylanase from Dictyoglomus thermophilum Rt46B.1, at 1.8 A resolution. Acta Crystallogr.,Sect.D 2000 56 1367 1375 1FMV 10954715 CRYSTAL STRUCTURE OF THE APO MOTOR DOMAIN OF DICTYOSTELLIUM MYOSIN II 2000-08-18 2000-11-22 Bauer, C.B.,Holden, H.M.,Thoden, J.B.,Smith, R.,Rayment, I. X-ray structures of the apo and MgATP-bound states of Dictyostelium discoideum myosin motor domain. J.Biol.Chem. 2000 275 38494 38499 1FMW 10954715 CRYSTAL STRUCTURE OF THE MGATP COMPLEX FOR THE MOTOR DOMAIN OF DICTYOSTELIUM MYOSIN II 2000-08-18 2000-11-22 Bauer, C.B.,Holden, H.M.,Thoden, J.B.,Smith, R.,Rayment, I. X-ray structures of the apo and MgATP-bound states of Dictyostelium discoideum myosin motor domain. J.Biol.Chem. 2000 275 38494 38499 1DH3 10952992 CRYSTAL STRUCTURE OF A CREB BZIP-CRE COMPLEX REVEALS THE BASIS FOR CREB FAIMLY SELECTIVE DIMERIZATION AND DNA BINDING 1999-11-27 2000-11-27 Schumacher, M.A.,Goodman, R.H.,Brennan, R.G. The structure of a CREB bZIP.somatostatin CRE complex reveals the basis for selective dimerization and divalent cation-enhanced DNA binding J.Biol.Chem. 2000 275 35242 35247 1FPO 11124030 HSC20 (HSCB), A J-TYPE CO-CHAPERONE FROM E. COLI 2000-08-31 2000-12-08 Cupp-Vickery, J.R.,Vickery, L.E. Crystal structure of Hsc20, a J-type Co-chaperone from Escherichia coli. J.Mol.Biol. 2000 304 835 845 1DM6 11695891 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH N-(4-CHLOROPHENYL)-N'-HYDROXYGUANIDINE (H4B FREE) 1999-12-13 2000-12-13 Raman, C.S.,Li, H.,Martasek, P.,Southan, G.,Masters, B.S.,Poulos, T.L. Crystal structure of nitric oxide synthase bound to nitro indazole reveals a novel inactivation mechanism. Biochemistry 2001 40 13448 13455 1DM7 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH HOMOARGININE (H4B FREE) 1999-12-13 2000-12-13 Raman, C.S.,Li, H.,Martasek, P.,Southan, G.J.,Masters, B.S.S.,Poulos, T.L. Crystal Structures of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed With Various Inhibitors To be Published 0 0 0 0 1DM8 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH 1,2,4-TRIAZOLE-CARBOXAMIDINE (H4B BOUND) 1999-12-13 2000-12-13 Raman, C.S.,Li, H.,Martasek, P.,Southan, G.J.,Masters, B.S.S.,Poulos, T.L. Crystal Structures of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed With Various Inhibitors To be Published 0 0 0 0 1GAO 11704670 CRYSTAL STRUCTURE OF THE L44S MUTANT OF FERREDOXIN I 2000-11-30 2000-12-13 Chen, K.,Jung, Y.S.,Bonagura, C.A.,Tilley, G.J.,Prasad, G.S.,Sridhar, V.,Armstrong, F.A.,Stout, C.D.,Burgess, B.K. Azotobacter vinelandii ferredoxin I: a sequence and structure comparison approach to alteration of [4Fe-4S]2+/+ reduction potential. J.Biol.Chem. 2002 277 5603 5610 1DMJ 11590164 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH 5,6-CYCLIC-TETRAHYDROPTERIDINE 1999-12-14 2000-12-20 Kotsonis, P.,Frohlich, L.G.,Raman, C.S.,Li, H.,Berg, M.,Gerwig, R.,Groehn, V.,Kang, Y.,Al-Masoudi, N.,Taghavi-Moghadam, S.,Mohr, D.,Munch, U.,Schnabel, J.,Martasek, P.,Masters, B.S.,Strobel, H.,Poulos, T.,Matter, H.,Pfleiderer, W.,Schmidt, H.H. Structural basis for pterin antagonism in nitric-oxide synthase. Development of novel 4-oxo-pteridine antagonists of (6R)-5,6,7,8-tetrahydrobiopterin J.Biol.Chem. 2001 276 49133 49141 1FBU 11305238 HEAT SHOCK TRANSCRIPTION FACTOR DNA BINDING DOMAIN 2000-07-16 2001-01-10 Hardy, J.A.,Nelson, H.C. Proline in alpha-helical kink is required for folding kinetics but not for kinked structure, function, or stability of heat shock transcription factor. Protein Sci. 2000 9 2128 2141 1EFY 11063605 CRYSTAL STRUCTURE OF THE CATALYTIC FRAGMENT OF POLY (ADP-RIBOSE) POLYMERASE COMPLEXED WITH A BENZIMIDAZOLE INHIBITOR 2000-02-10 2001-01-17 White, A.W.,Almassy, R.,Calvert, A.H.,Curtin, N.J.,Griffin, R.J.,Hostomsky, Z.,Maegley, K.,Newell, D.R.,Srinivasan, S.,Golding, B.T. Resistance-modifying agents. 9. Synthesis and biological properties of benzimidazole inhibitors of the DNA repair enzyme poly(ADP-ribose) polymerase. J.Med.Chem. 2000 43 4084 4097 1FBS 11305238 HEAT SHOCK TRANSCRIPTION FACTOR DNA BINDING DOMAIN CONTAINING THE P237A MUTATION 2000-07-16 2001-01-17 Hardy, J.A.,Nelson, H.C. Proline in alpha-helical kink is required for folding kinetics but not for kinked structure, function, or stability of heat shock transcription factor. Protein Sci. 2000 9 2128 2141 1ED5 11695891 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH NNA(H4B FREE) 2000-01-26 2001-01-31 Raman, C.S.,Li, H.,Martasek, P.,Southan, G.,Masters, B.S.,Poulos, T.L. Crystal structure of nitric oxide synthase bound to nitro indazole reveals a novel inactivation mechanism. Biochemistry 2001 40 13448 13455 1ED6 11331003 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH L-NIO (H4B FREE) 2000-01-26 2001-01-31 Li, H.,Raman, C.S.,Martasek, P.,Masters, B.S.,Poulos, T.L. Crystallographic studies on endothelial nitric oxide synthase complexed with nitric oxide and mechanism-based inhibitors. Biochemistry 2001 40 5399 5406 1G1M 11170381 ALL-FERROUS NITROGENASE IRON PROTEIN FROM AZOTOBACTER VINELANDII 2000-10-12 2001-01-31 Strop, P.,Takahara, P.M.,Chiu, H.,Angove, H.C.,Burgess, B.K.,Rees, D.C. Crystal structure of the all-ferrous [4Fe-4S]0 form of the nitrogenase iron protein from Azotobacter vinelandii. Biochemistry 2001 40 651 656 1G20 11170380 MGATP-BOUND AND NUCLEOTIDE-FREE STRUCTURES OF A NITROGENASE PROTEIN COMPLEX BETWEEN LEU127DEL-FE PROTEIN AND THE MOFE PROTEIN 2000-10-16 2001-01-31 Chiu, H.,Peters, J.W.,Lanzilotta, W.N.,Ryle, M.J.,Seefeldt, L.C.,Howard, J.B.,Rees, D.C. MgATP-Bound and nucleotide-free structures of a nitrogenase protein complex between the Leu 127 Delta-Fe-protein and the MoFe-protein. Biochemistry 2001 40 641 650 1G21 11170380 MGATP-BOUND AND NUCLEOTIDE-FREE STRUCTURES OF A NITROGENASE PROTEIN COMPLEX BETWEEN LEU127DEL-FE PROTEIN AND THE MOFE PROTEIN 2000-10-16 2001-01-31 Chiu, H.,Peters, J.W.,Lanzilotta, W.N.,Ryle, M.J.,Seefeldt, L.C.,Howard, J.B.,Rees, D.C. MgATP-Bound and nucleotide-free structures of a nitrogenase protein complex between the Leu 127 Delta-Fe-protein and the MoFe-protein. Biochemistry 2001 40 641 650 1G5P 11170381 NITROGENASE IRON PROTEIN FROM AZOTOBACTER VINELANDII 2000-11-01 2001-01-31 Strop, P.,Takahara, P.M.,Chiu, H.,Angove, H.C.,Burgess, B.K.,Rees, D.C. Crystal structure of the all-ferrous [4Fe-4S]0 form of the nitrogenase iron protein from Azotobacter vinelandii. Biochemistry 2001 40 651 656 1F8W 10956025 CRYSTAL STRUCTURE OF NADH PEROXIDASE MUTANT: R303M 2000-07-05 2001-02-05 Crane III, E.J.,Yeh, J.I.,Luba, J.,Claiborne, A. Analysis of the kinetic and redox properties of the NADH peroxidase R303M mutant: correlation with the crystal structure. Biochemistry 2000 39 10353 10364 1F9J 11173499 STRUCTURE OF A NEW CRYSTAL FORM OF TETRAUBIQUITIN 2000-07-10 2001-02-07 Phillips, C.L.,Thrower, J.,Pickart, C.M.,Hill, C.P. Structure of a new crystal form of tetraubiquitin. Acta Crystallogr.,Sect.D 2001 57 341 344 1FZ0 11456616 METHANE MONOOXYGENASE HYDROXYLASE, FORM II MIXED-VALENT GROWN ANAEROBICALLY 2000-10-03 2001-02-21 Whittington, D.A.,Lippard, S.J. Crystal structures of the soluble methane monooxygenase hydroxylase from Methylococcus capsulatus (Bath) demonstrating geometrical variability at the dinuclear iron active site. J.Am.Chem.Soc. 2001 123 827 838 1EVY 10801498 CRYSTAL STRUCTURE OF LEISHMANIA MEXICANA GLYCEROL-3-PHOSPHATE DEHYDROGENASE 2000-04-20 2001-02-22 Suresh, S.,Turley, S.,Opperdoes, F.R.,Michels, P.A.,Hol, W.G. A potential target enzyme for trypanocidal drugs revealed by the crystal structure of NAD-dependent glycerol-3-phosphate dehydrogenase from Leishmania mexicana. Structure Fold.Des. 2000 8 541 552 1EVZ 10801498 CRYSTAL STRUCTURE OF LEISHMANIA MEXICANA GLYCEROL-3-PHOSPHATE DEHYDROGENASE IN COMPLEX WITH NAD 2000-04-21 2001-02-22 Suresh, S.,Turley, S.,Opperdoes, F.R.,Michels, P.A.,Hol, W.G. A potential target enzyme for trypanocidal drugs revealed by the crystal structure of NAD-dependent glycerol-3-phosphate dehydrogenase from Leishmania mexicana. Structure Fold.Des. 2000 8 541 552 1FZ4 11456616 METHANE MONOOXYGENASE HYDROXYLASE, FORM III SOAKED AT PH 8.5 (0.1 M TRIS) 2000-10-03 2001-02-28 Whittington, D.A.,Lippard, S.J. Crystal structures of the soluble methane monooxygenase hydroxylase from Methylococcus capsulatus (Bath) demonstrating geometrical variability at the dinuclear iron active site. J.Am.Chem.Soc. 2001 123 827 838 1CX4 11342137 CRYSTAL STRUCTURE OF A DELETION MUTANT OF THE TYPE II BETA REGULATORY SUBUNIT OF CAMP-DEPENDENT PROTEIN KINASE 1999-08-28 2001-03-07 Diller, T.C.,Madhusudan,Xuong, N.H.,Taylor, S.S. Molecular basis for regulatory subunit diversity in cAMP-dependent protein kinase: crystal structure of the type II beta regulatory subunit. Structure 2001 9 73 82 1DS4 11170452 CYTOCHROME C PEROXIDASE H175G MUTANT, IMIDAZOLE COMPLEX, PH 6, 100K 2000-01-07 2001-03-07 Hirst, J.,Wilcox, S.K.,Williams, P.A.,Blankenship, J.,McRee, D.E.,Goodin, D.B. Replacement of the axial histidine ligand with imidazole in cytochrome c peroxidase. 1. Effects on structure. Biochemistry 2001 40 1265 1273 1DSG 11170452 CYTOCHROME C PEROXIDASE H175G MUTANT, IMIDAZOLE COMPLEX AT PH 5, ROOM TEMPERATURE. 2000-01-07 2001-03-07 Hirst, J.,Wilcox, S.K.,Williams, P.A.,Blankenship, J.,McRee, D.E.,Goodin, D.B. Replacement of the axial histidine ligand with imidazole in cytochrome c peroxidase. 1. Effects on structure. Biochemistry 2001 40 1265 1273 1DSO 11170452 CYTOCHROME C PEROXIDASE H175G MUTANT, IMIDAZOLE COMPLEX AT PH 6, ROOM TEMPERATURE. 2000-01-07 2001-03-07 Hirst, J.,Wilcox, S.K.,Williams, P.A.,Blankenship, J.,McRee, D.E.,Goodin, D.B. Replacement of the axial histidine ligand with imidazole in cytochrome c peroxidase. 1. Effects on structure. Biochemistry 2001 40 1265 1273 1DSP 11170452 CYTOCHROME C PEROXIDASE H175G MUTANT, IMIDAZOLE COMPLEX AT PH 7, ROOM TEMPERATURE. 2000-01-07 2001-03-07 Hirst, J.,Wilcox, S.K.,Williams, P.A.,Blankenship, J.,McRee, D.E.,Goodin, D.B. Replacement of the axial histidine ligand with imidazole in cytochrome c peroxidase. 1. Effects on structure. Biochemistry 2001 40 1265 1273 1FP1 11224575 CRYSTAL STRUCTURE ANALYSIS OF CHALCONE O-METHYLTRANSFERASE 2000-08-29 2001-03-07 Zubieta, C.,He, X.Z.,Dixon, R.A.,Noel, J.P. Structures of two natural product methyltransferases reveal the basis for substrate specificity in plant O-methyltransferases. Nat.Struct.Biol. 2001 8 271 279 1I3O 11257232 CRYSTAL STRUCTURE OF THE COMPLEX OF XIAP-BIR2 AND CASPASE 3 2001-02-15 2001-03-21 Riedl, S.J.,Renatus, M.,Schwarzenbacher, R.,Zhou, Q.,Sun, C.,Fesik, S.W.,Liddington, R.C.,Salvesen, G.S. Structural basis for the inhibition of caspase-3 by XIAP. Cell(Cambridge,Mass.) 2001 104 791 800 1HQF 11258880 CRYSTAL STRUCTURE OF THE BINUCLEAR MANGANESE METALLOENZYME ARGINASE COMPLEXED WITH N-HYDROXY-L-ARGININE 2000-12-16 2001-04-04 Cox, J.D.,Cama, E.,Colleluori, D.M.,Pethe, S.,Boucher, J.L.,Mansuy, D.,Ash, D.E.,Christianson, D.W. Mechanistic and metabolic inferences from the binding of substrate analogues and products to arginase. Biochemistry 2001 40 2689 2701 1HQG 11258880 CRYSTAL STRUCTURE OF THE H141C ARGINASE VARIANT COMPLEXED WITH PRODUCTS ORNITHINE AND UREA 2000-12-16 2001-04-04 Cox, J.D.,Cama, E.,Colleluori, D.M.,Pethe, S.,Boucher, J.L.,Mansuy, D.,Ash, D.E.,Christianson, D.W. Mechanistic and metabolic inferences from the binding of substrate analogues and products to arginase. Biochemistry 2001 40 2689 2701 1FZ8 11297413 METHANE MONOOXYGENASE HYDROXYLASE, FORM II COCRYSTALLIZED WITH DIBROMOMETHANE 2000-10-03 2001-04-27 Whittington, D.A.,Rosenzweig, A.C.,Frederick, C.A.,Lippard, S.J. Xenon and halogenated alkanes track putative substrate binding cavities in the soluble methane monooxygenase hydroxylase. Biochemistry 2001 40 3476 3482 1FZ9 11297413 Methane monooxygenase hydroxylase, form II cocrystallized with iodoethane 2000-10-03 2001-04-27 Whittington, D.A.,Rosenzweig, A.C.,Frederick, C.A.,Lippard, S.J. Xenon and halogenated alkanes track putative substrate binding cavities in the soluble methane monooxygenase hydroxylase. Biochemistry 2001 40 3476 3482 1FZH 11297413 METHANE MONOOXYGENASE HYDROXYLASE, FORM II PRESSURIZED WITH XENON GAS 2000-10-03 2001-04-27 Whittington, D.A.,Rosenzweig, A.C.,Frederick, C.A.,Lippard, S.J. Xenon and halogenated alkanes track putative substrate binding cavities in the soluble methane monooxygenase hydroxylase. Biochemistry 2001 40 3476 3482 1FZI 11297413 METHANE MONOOXYGENASE HYDROXYLASE, FORM I PRESSURIZED WITH XENON GAS 2000-10-03 2001-04-27 Whittington, D.A.,Rosenzweig, A.C.,Frederick, C.A.,Lippard, S.J. Xenon and halogenated alkanes track putative substrate binding cavities in the soluble methane monooxygenase hydroxylase. Biochemistry 2001 40 3476 3482 1FQE 11327820 CRYSTAL STRUCTURES OF MUTANT (K206A) THAT ABOLISH THE DILYSINE INTERACTION IN THE N-LOBE OF HUMAN TRANSFERRIN 2000-09-04 2001-05-16 Nurizzo, D.,Baker, H.M.,He, Q.Y.,MacGillivray, R.T.,Mason, A.B.,Woodworth, R.C.,Baker, E.N. Crystal structures and iron release properties of mutants (K206A and K296A) that abolish the dilysine interaction in the N-lobe of human transferrin. Biochemistry 2001 40 1616 1623 1I5P 11377201 INSECTICIDAL CRYSTAL PROTEIN CRY2AA 2001-02-28 2001-05-16 Morse, R.J.,Yamamoto, T.,Stroud, R.M. Structure of Cry2Aa suggests an unexpected receptor binding epitope. Structure 2001 9 409 417 1I7Q 11371633 ANTHRANILATE SYNTHASE FROM S. MARCESCENS 2001-03-10 2001-05-16 Spraggon, G.,Kim, C.,Nguyen-Huu, X.,Yee, M.C.,Yanofsky, C.,Mills, S.E. The structures of anthranilate synthase of Serratia marcescens crystallized in the presence of (i) its substrates, chorismate and glutamine, and a product, glutamate, and (ii) its end-product inhibitor, L-tryptophan. Proc.Natl.Acad.Sci.USA 2001 98 6021 6026 1JDR 10220341 Crystal Structure of a Proximal Domain Potassium Binding Variant of Cytochrome c Peroxidase 2001-06-14 2001-06-27 Bonagura, C.A.,Sundaramoorthy, M.,Bhaskar, B.,Poulos, T.L. The effects of an engineered cation site on the structure, activity, and EPR properties of cytochrome c peroxidase. Biochemistry 1999 38 5538 5545 1I2D 11389593 CRYSTAL STRUCTURE OF ATP SULFURYLASE FROM PENICILLIUM CHRYSOGENUM 2001-02-07 2001-07-11 MacRae, I.J.,Segel, I.H.,Fisher, A.J. Crystal structure of ATP sulfurylase from Penicillium chrysogenum: insights into the allosteric regulation of sulfate assimilation. Biochemistry 2001 40 6795 6804 1I52 11427897 CRYSTAL STRUCTURE OF 4-DIPHOSPHOCYTIDYL-2-C-METHYLERYTHRITOL (CDP-ME) SYNTHASE (YGBP) INVOLVED IN MEVALONATE INDEPENDENT ISOPRENOID BIOSYNTHESIS 2001-02-23 2001-07-11 Richard, S.B.,Bowman, M.E.,Kwiatkowski, W.,Kang, I.,Chow, C.,Lillo, A.M.,Cane, D.E.,Noel, J.P. Structure of 4-diphosphocytidyl-2-C- methylerythritol synthetase involved in mevalonate- independent isoprenoid biosynthesis. Nat.Struct.Biol. 2001 8 641 648 1JC4 11470438 Crystal Structure of Se-Met Methylmalonyl-CoA Epimerase 2001-06-07 2001-07-11 McCarthy, A.A.,Baker, H.M.,Shewry, S.C.,Patchett, M.L.,Baker, E.N. Crystal structure of methylmalonyl-coenzyme A epimerase from P. shermanii: a novel enzymatic function on an ancient metal binding scaffold. Structure 2001 9 637 646 1JC5 11470438 Crystal Structure of Native Methylmalonyl-CoA Epimerase 2001-06-07 2001-07-11 McCarthy, A.A.,Baker, H.M.,Shewry, S.C.,Patchett, M.L.,Baker, E.N. Crystal structure of methylmalonyl-coenzyme A epimerase from P. shermanii: a novel enzymatic function on an ancient metal binding scaffold. Structure 2001 9 637 646 1FQW 11279165 CRYSTAL STRUCTURE OF ACTIVATED CHEY 2000-09-07 2001-07-18 Lee, S.Y.,Cho, H.S.,Pelton, J.G.,Yan, D.,Berry, E.A.,Wemmer, D.E. Crystal structure of activated CheY. Comparison with other activated receiver domains. J.Biol.Chem. 2001 276 16425 16431 1FOI 11331003 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH 1400W(H4B-FREE) 2000-08-28 2001-07-20 Li, H.,Raman, C.S.,Martasek, P.,Masters, B.S.,Poulos, T.L. Crystallographic studies on endothelial nitric oxide synthase complexed with nitric oxide and mechanism-based inhibitors. Biochemistry 2001 40 5399 5406 1FOL 11331003 REDUCED BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH L-ARG(H4B-FREE) 2000-08-28 2001-07-20 Li, H.,Raman, C.S.,Martasek, P.,Masters, B.S.,Poulos, T.L. Crystallographic studies on endothelial nitric oxide synthase complexed with nitric oxide and mechanism-based inhibitors Biochemistry 2001 40 5399 5406 1FOO 11331003 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH L-ARG AND NO(H4B-FREE) 2000-08-28 2001-07-20 Li, H.,Raman, C.S.,Martasek, P.,Masters, B.S.,Poulos, T.L. Crystallographic studies on endothelial nitric oxide synthase complexed with nitric oxide and mechanism-based inhibitors. Biochemistry 2001 40 5399 5406 1FOP 11331003 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH L-ARG AND NO(H4B-BOUND) 2000-08-28 2001-07-20 Li, H.,Raman, C.S.,Martasek, P.,Masters, B.S.,Poulos, T.L. Crystallographic studies on endothelial nitric oxide synthase complexed with nitric oxide and mechanism-based inhibitors. Biochemistry 2001 40 5399 5406 1D1V 11331290 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH S-ETHYL-N-PHENYL-ISOTHIOUREA (H4B BOUND) 1999-09-21 2001-07-25 Raman, C.S.,Li, H.,Martasek, P.,Babu, B.R.,Griffith, O.W.,Masters, B.S.,Poulos, T.L. Implications for isoform-selective inhibitor design derived from the binding mode of bulky isothioureas to the heme domain of endothelial nitric-oxide synthase. J.Biol.Chem. 2001 276 26486 26491 1D1X 11331290 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH 1,4-PBITU (H4B BOUND) 1999-09-21 2001-07-25 Raman, C.S.,Li, H.,Martasek, P.,Babu, B.R.,Griffith, O.W.,Masters, B.S.,Poulos, T.L. Implications for isoform-selective inhibitor design derived from the binding mode of bulky isothioureas to the heme domain of endothelial nitric-oxide synthase. J.Biol.Chem. 2001 276 26486 26491 1D1Y 11331290 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH 1,3-PBITU (H4B FREE) 1999-09-21 2001-07-25 Raman, C.S.,Li, H.,Martasek, P.,Babu, B.R.,Griffith, O.W.,Masters, B.S.,Poulos, T.L. Implications for isoform-selective inhibitor design derived from the binding mode of bulky isothioureas to the heme domain of endothelial nitric-oxide synthase. J.Biol.Chem. 2001 276 26486 26491 1I83 11331290 BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH N1,N14-BIS((S-METHYL)ISOTHIOUREIDO)TETRADECANE (H4B FREE) 2001-03-12 2001-08-08 Raman, C.S.,Li, H.,Martasek, P.,Babu, B.R.,Griffith, O.W.,Masters, B.S.,Poulos, T.L. Implications for isoform-selective inhibitor design derived from the binding mode of bulky isothioureas to the heme domain of endothelial nitric-oxide synthase. J.Biol.Chem. 2001 276 26486 26491 1IN7 11478862 THERMOTOGA MARITIMA RUVB R170A 2001-05-12 2001-08-08 Putnam, C.D.,Clancy, S.B.,Tsuruta, H.,Gonzalez, S.,Wetmur, J.G.,Tainer, J.A. Structure and mechanism of the RuvB Holliday junction branch migration motor. J.Mol.Biol. 2001 311 297 310 1J7K 11478862 THERMOTOGA MARITIMA RUVB P216G MUTANT 2001-05-16 2001-08-08 Putnam, C.D.,Clancy, S.B.,Tsuruta, H.,Gonzalez, S.,Wetmur, J.G.,Tainer, J.A. Structure and mechanism of the RuvB Holliday junction branch migration motor. J.Mol.Biol. 2001 311 297 310 1HZH 11498595 CRYSTAL STRUCTURE OF THE INTACT HUMAN IGG B12 WITH BROAD AND POTENT ACTIVITY AGAINST PRIMARY HIV-1 ISOLATES: A TEMPLATE FOR HIV VACCINE DESIGN 2001-01-24 2001-08-15 Saphire, E.O.,Parren, P.W.,Pantophlet, R.,Zwick, M.B.,Morris, G.M.,Rudd, P.M.,Dwek, R.A.,Stanfield, R.L.,Burton, D.R.,Wilson, I.A. Crystal structure of a neutralizing human IGG against HIV-1: a template for vaccine design. Science 2001 293 1155 1159 1IEL 11478888 Crystal Structure of AmpC beta-lactamase from E. coli in Complex with Ceftazidime 2001-04-10 2001-08-15 Powers, R.A.,Caselli, E.,Focia, P.J.,Prati, F.,Shoichet, B.K. Structures of ceftazidime and its transition-state analogue in complex with AmpC beta-lactamase: implications for resistance mutations and inhibitor design. Biochemistry 2001 40 9207 9214 1IEM 11478888 Crystal Structure of AmpC beta-lactamase from E. coli in Complex with a Boronic Acid Inhibitor (1, CefB4) 2001-04-10 2001-08-15 Powers, R.A.,Caselli, E.,Focia, P.J.,Prati, F.,Shoichet, B.K. Structures of ceftazidime and its transition-state analogue in complex with AmpC beta-lactamase: implications for resistance mutations and inhibitor design. Biochemistry 2001 40 9207 9214 1JMW 11504940 Propagating Conformational Changes Over Long (And Short) Distances 2001-07-20 2001-08-15 Yu, E.W.,Koshland Jr., D.E. Propagating conformational changes over long (and short) distances in proteins. Proc.Natl.Acad.Sci.USA 2001 98 9517 9520 1JCZ 11493685 CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN CARBONIC ANHYDRASE XII 2001-06-11 2001-08-17 Whittington, D.A.,Waheed, A.,Ulmasov, B.,Shah, G.N.,Grubb, J.H.,Sly, W.S.,Christianson, D.W. Crystal structure of the dimeric extracellular domain of human carbonic anhydrase XII, a bitopic membrane protein overexpressed in certain cancer tumor cells. Proc.Natl.Acad.Sci.USA 2001 98 9545 9550 1I5A 11276258 STRUCTURE OF CHEA DOMAIN P4 IN COMPLEX WITH ADPCP AND MANGANESE 2001-02-26 2001-08-26 Bilwes, A.M.,Quezada, C.M.,Croal, L.R.,Crane, B.R.,Simon, M.I. Nucleotide binding by the histidine kinase CheA. Nat.Struct.Biol. 2001 8 353 360 1I5D 11276258 STRUCTURE OF CHEA DOMAIN P4 IN COMPLEX WITH TNP-ATP 2001-02-26 2001-08-26 Bilwes, A.M.,Quezada, C.M.,Croal, L.R.,Crane, B.R.,Simon, M.I. Nucleotide binding by the histidine kinase CheA. Nat.Struct.Biol. 2001 8 353 360 1FO6 11237598 CRYSTAL STRUCTURE ANALYSIS OF N-CARBAMoYL-D-AMINO-ACID AMIDOHYDROLASE 2000-08-25 2001-08-29 Wang, W.C.,Hsu, W.H.,Chien, F.T.,Chen, C.Y. Crystal structure and site-directed mutagenesis studies of N-carbamoyl-D-amino-acid amidohydrolase from Agrobacterium radiobacter reveals a homotetramer and insight into a catalytic cleft. J.Mol.Biol. 2001 306 251 261 1JGW 11526320 Photosynthetic Reaction Center Mutant With Thr M 21 Replaced With Leu 2001-06-27 2001-09-05 Camara-Artigas, A.,Magee, C.L.,Williams, J.C.,Allen, J.P. Individual interactions influence the crystalline order for membrane proteins. Acta Crystallogr.,Sect.D 2001 57 1281 1286 1JGX 11526320 Photosynthetic Reaction Center Mutant With Thr M 21 Replaced With Asp 2001-06-27 2001-09-05 Camara-Artigas, A.,Magee, C.L.,Williams, J.C.,Allen, J.P. Individual interactions influence the crystalline order for membrane proteins. Acta Crystallogr.,Sect.D 2001 57 1281 1286 1JGY 11526320 Photosynthetic Reaction Center Mutant With Tyr M 76 Replaced With Phe 2001-06-27 2001-09-05 Camara-Artigas, A.,Magee, C.L.,Williams, J.C.,Allen, J.P. Individual interactions influence the crystalline order for membrane proteins. Acta Crystallogr.,Sect.D 2001 57 1281 1286 1JGZ 11526320 Photosynthetic Reaction Center Mutant With Tyr M 76 Replaced With Lys 2001-06-27 2001-09-05 Camara-Artigas, A.,Magee, C.L.,Williams, J.C.,Allen, J.P. Individual interactions influence the crystalline order for membrane proteins. Acta Crystallogr.,Sect.D 2001 57 1281 1286 1I3D 11514664 HUMAN CARBONMONOXY HEMOGLOBIN BART'S (GAMMA4) 2001-02-15 2001-09-12 Kidd, R.D.,Baker, H.M.,Mathews, A.J.,Brittain, T.,Baker, E.N. Oligomerization and ligand binding in a homotetrameric hemoglobin: two high-resolution crystal structures of hemoglobin Bart's (gamma(4)), a marker for alpha-thalassemia. Protein Sci. 2001 10 1739 1749 1JBW 11501996 FPGS-AMPPCP-folate complex 2001-06-06 2001-09-19 Sun, X.,Cross, J.A.,Bognar, A.L.,Baker, E.N.,Smith, C.A. Folate-binding triggers the activation of folylpolyglutamate synthetase. J.Mol.Biol. 2001 310 1067 1078 1FYL 11599025 SERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA IN A HEAD-TO-HEAD ORIENTATION 2000-10-02 2001-09-28 Littlefield, O.,Nelson, H.C. Crystal packing interaction that blocks crystallization of a site-specific DNA binding protein-DNA complex. Proteins 2001 45 219 228 1FYM 11599025 SERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA IN A TAIL-TO-TAIL ORIENTATION 2000-10-02 2001-09-28 Littlefield, O.,Nelson, H.C. Crystal packing interaction that blocks crystallization of a site-specific DNA binding protein-DNA complex. Proteins 2001 45 219 228 1JIP 11469860 P450eryF(A245S)/ketoconazole 2001-07-02 2001-10-17 Cupp-Vickery, J.R.,Garcia, C.,Hofacre, A.,McGee-Estrada, K. Ketoconazole-induced conformational changes in the active site of cytochrome P450eryF. J.Mol.Biol. 2001 311 101 110 1JZE 11716717 Pseudomonas aeruginosa Azurin Ru(bpy)2(im)(His83) 2001-09-16 2001-10-17 Crane, B.R.,Di Bilio, A.J.,Winkler, J.R.,Gray, H.B. Electron tunneling in single crystals of Pseudomonas aeruginosa azurins. J.Am.Chem.Soc. 2001 123 11623 11631 1JZH 11716717 Pseudomonas aeruginosa Azurin Ru(tpy)(bpy)(His83) 2001-09-16 2001-10-17 Crane, B.R.,Di Bilio, A.J.,Winkler, J.R.,Gray, H.B. Electron tunneling in single crystals of Pseudomonas aeruginosa azurins. J.Am.Chem.Soc. 2001 123 11623 11631 1JZI 11716717 Pseudomonas aeruginosa Azurin Re(phen)(CO)3(His83) 2001-09-16 2001-10-17 Crane, B.R.,Di Bilio, A.J.,Winkler, J.R.,Gray, H.B. Electron tunneling in single crystals of Pseudomonas aeruginosa azurins. J.Am.Chem.Soc. 2001 123 11623 11631 1I3S 11402050 THE 2.7 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF A MUTATED BACULOVIRUS P35 AFTER CASPASE CLEAVAGE 2001-02-15 2001-10-24 dela Cruz, W.P.,Friesen, P.D.,Fisher, A.J. Crystal structure of baculovirus P35 reveals a novel conformational change in the reactive site loop after caspase cleavage. J.Biol.Chem. 2001 276 32933 32939 1F1E 11567091 CRYSTAL STRUCTURE OF THE HISTONE FROM METHANOPYRUS KANDLERI 2000-05-18 2001-10-31 Fahrner, R.L.,Cascio, D.,Lake, J.A.,Slesarev, A. An ancestral nuclear protein assembly: crystal structure of the Methanopyrus kandleri histone. Protein Sci. 2001 10 2002 2007 1JWK 11669619 Murine Inducible Nitric Oxide Synthase Oxygenase Dimer (Delta 65) with W457A Mutation at Tetrahydrobiopterin Binding Site 2001-09-04 2001-10-31 Aoyagi, M.,Arvai, A.S.,Ghosh, S.,Stuehr, D.J.,Tainer, J.A.,Getzoff, E.D. Structures of tetrahydrobiopterin binding-site mutants of inducible nitric oxide synthase oxygenase dimer and implicated roles of Trp457. Biochemistry 2001 40 12826 12832 1JKY 11700563 Crystal Structure of the Anthrax Lethal Factor (LF): Wild-type LF Complexed with the N-terminal Sequence of MAPKK2 2001-07-13 2001-11-07 Pannifer, A.D.,Wong, T.Y.,Schwarzenbacher, R.,Renatus, M.,Petosa, C.,Bienkowska, J.,Lacy, D.B.,Collier, R.J.,Park, S.,Leppla, S.H.,Hanna, P.,Liddington, R.C. Crystal structure of the anthrax lethal factor. Nature 2001 414 229 233 1JBG 11581256 Crystal Structure of MtaN, the Bacillus subtilis Multidrug Transporter Activator, N-terminus 2001-06-04 2001-11-28 Godsey, M.H.,Baranova, N.N.,Neyfakh, A.A.,Brennan, R.G. Crystal structure of MtaN, a global multidrug transporter gene activator. J.Biol.Chem. 2001 276 47178 47184 1JGU 11724535 STRUCTURAL BASIS FOR DISFAVORED ELIMINATION REACTION IN CATALYTIC ANTIBODY 1D4 2001-06-26 2001-12-05 Larsen, N.A.,Heine, A.,Crane, L.,Cravatt, B.F.,Lerner, R.A.,Wilson, I.A. Structural basis for a disfavored elimination reaction in catalytic antibody 1D4. J.Mol.Biol. 2001 314 93 102 1JZ2 11732897 E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE (ORTHORHOMBIC) 2001-09-13 2001-12-07 Juers, D.H.,Heightman, T.D.,Vasella, A.,McCarter, J.D.,Mackenzie, L.,Withers, S.G.,Matthews, B.W. A Structural View of the Action of Escherichia Coli (Lacz) Beta-Galactosidase Biochemistry 2001 40 14781 14794 1I89 11732902 Chalcone synthase (G256L) 2001-03-12 2001-12-12 Jez, J.M.,Bowman, M.E.,Noel, J.P. Structure-guided programming of polyketide chain-length determination in chalcone synthase. Biochemistry 2001 40 14829 14838 1IKQ 11734000 Pseudomonas Aeruginosa Exotoxin A, wild type 2001-05-04 2001-12-12 Wedekind, J.E.,Trame, C.B.,Dorywalska, M.,Koehl, P.,Raschke, T.M.,McKee, M.,FitzGerald, D.,Collier, R.J.,McKay, D.B. Refined Crystallographic Structure of Pseudomonas aeruginosa Exotoxin A and its Implications for the Molecular Mechanism of Toxicity J.Mol.Biol. 2001 314 823 837 1ILW 11714269 Crystal Structure of Pyrazinamidase/Nicotinamidase of Pyrococcus horikoshii 2001-05-08 2001-12-12 Du, X.,Wang, W.,Kim, R.,Yakota, H.,Nguyen, H.,Kim, S.-H. Crystal structure and mechanism of catalysis of a pyrazinamidase from Pyrococcus horikoshii. Biochemistry 2001 40 14166 14172 1JMV 11738040 Structure of Haemophylus influenzae Universal Stress Protein At 1.85A Resolution 2001-07-20 2001-12-12 Sousa, M.C.,McKay, D.B. Structure of the universal stress protein of Haemophilus influenzae. Structure 2001 9 1135 1141 1JXQ 11734640 Structure of cleaved, CARD domain deleted Caspase-9 2001-09-08 2001-12-12 Renatus, M.,Stennicke, H.R.,Scott, F.L.,Liddington, R.C.,Salvesen, G.S. Dimer formation drives the activation of the cell death protease caspase 9. Proc.Natl.Acad.Sci.USA 2001 98 14250 14255 1K0O 11551966 Crystal structure of a soluble form of CLIC1. An intracellular chloride ion channel 2001-09-19 2001-12-12 Harrop, S.J.,DeMaere, M.Z.,Fairlie, W.D.,Reztsova, T.,Valenzuela, S.M.,Mazzanti, M.,Tonini, R.,Qiu, M.R.,Jankova, L.,Warton, K.,Bauskin, A.R.,Wu, W.M.,Pankhurst, S.,Campbell, T.J.,Breit, S.N.,Curmi, P.M. Crystal structure of a soluble form of the intracellular chloride ion channel CLIC1 (NCC27) at 1.4-A resolution. J.Biol.Chem. 2001 276 44993 45000 1J4X 11863439 HUMAN VH1-RELATED DUAL-SPECIFICITY PHOSPHATASE C124S MUTANT-PEPTIDE COMPLEX 2001-12-13 2001-12-19 Schumacher, M.A.,Todd, J.L.,Rice, A.E.,Tanner, K.G.,Denu, J.M. Structural basis for the recognition of a bisphosphorylated MAP kinase peptide by human VHR protein Phosphatase. Biochemistry 2002 41 3009 3017 1KEE 11729189 Inactivation of the Amidotransferase Activity of Carbamoyl Phosphate Synthetase by the Antibiotic Acivicin 2001-11-15 2001-12-21 Miles, B.W.,Thoden, J.B.,Holden, H.M.,Raushel, F.M. Inactivation of the amidotransferase activity of carbamoyl phosphate synthetase by the antibiotic acivicin. J.Biol.Chem. 2002 277 4368 4373 1FQO 11752775 GLUCOSAMINE 6-PHOSPHATE DEAMINASE COMPLEXED WITH THE SUBSTRATE OF THE REVERSE REACTION FRUCTOSE 6-PHOSPHATE (OPEN FORM) 2000-09-06 2002-01-04 Rudino-Pinera, E.,Morales-Arrieta, S.,Rojas-Trejo, S.P.,Horjales, E. Structural flexibility, an essential component of the allosteric activation in Escherichia coli glucosamine-6-phosphate deaminase. Acta Crystallogr.,Sect.D 2002 58 10 20 1FRZ 11752775 GLUCOSAMINE-6-PHOSPHATE DEAMINASE FROM E.COLI, R CONFORMER. COMPLEXED WITH THE ALLOSTERIC ACTIVATOR N-ACETYL-GLUCOSAMINE-6-PHOSPHATE AT 2.2 A RESOLUTION 2000-09-07 2002-01-04 Rudino-Pinera, E.,Morales-Arrieta, S.,Rojas-Trejo, S.P.,Horjales, E. Structural flexibility, an essential component of the allosteric activation in Escherichia coli glucosamine-6-phosphate deaminase. Acta Crystallogr.,Sect.D 2002 58 10 20 1FS6 11752775 GLUCOSAMINE-6-PHOSPHATE DEAMINASE FROM E.COLI, T CONFORMER, AT 2.2A RESOLUTION 2000-09-08 2002-01-04 Rudino-Pinera, E.,Morales-Arrieta, S.,Rojas-Trejo, S.P.,Horjales, E. Structural flexibility, an essential component of the allosteric activation in Escherichia coli glucosamine-6-phosphate deaminase. Acta Crystallogr.,Sect.D 2002 58 10 20 1F6B 11739406 CRYSTAL STRUCTURE OF SAR1-GDP COMPLEX 2000-06-21 2002-01-09 Huang, M.,Weissman, J.T.,Beraud-Dufour, S.,Luan, P.,Wang, C.,Chen, W.,Aridor, M.,Wilson, I.A.,Balch, W.E. Crystal structure of Sar1-GDP at 1.7 A resolution and the role of the NH2 terminus in ER export. J.Cell Biol. 2001 155 937 948 1F6B 11739406 CRYSTAL STRUCTURE OF SAR1-GDP COMPLEX 2000-06-21 2002-01-09 Huang, M.,Weissman, J.T.,Beraud-Dufour, S.,Luan, P.,Wang, C.,Chen, W.,Aridor, M.,Wilson, I.A.,Balch, W.E. Crystal structure of Sar1-GDP at 1.7 A resolution and the role of the NH2 terminus in ER export. J.Cell Biol. 2001 155 937 948 1JGC 11752777 The 2.6 A Structure Resolution of Rhodobacter capsulatus Bacterioferritin with Metal-free Dinuclear Site and Heme Iron in a Crystallographic Special Position 2001-06-24 2002-01-09 Cobessi, D.,Huang, L.S.,Ban, M.,Pon, N.G.,Daldal, F.,Berry, E.A. The 2.6 A resolution structure of Rhodobacter capsulatus bacterioferritin with metal-free dinuclear site and heme iron in a crystallographic 'special position'. Acta Crystallogr.,Sect.D 2002 58 29 38 1KEZ 11752428 Crystal Structure of the Macrocycle-forming Thioesterase Domain of Erythromycin Polyketide Synthase (DEBS TE) 2001-11-19 2002-01-09 Tsai, S.C.,Miercke, L.J.,Krucinski, J.,Gokhale, R.,Chen, J.C.,Foster, P.G.,Cane, D.E.,Khosla, C.,Stroud, R.M. Crystal structure of the macrocycle-forming thioesterase domain of the erythromycin polyketide synthase: versatility from a unique substrate channel. Proc.Natl.Acad.Sci.USA 2001 98 14808 14813 1KMC Crystal Structure of the Caspase-7 / XIAP-BIR2 Complex 2001-12-14 2002-01-16 Riedl, S.J.,Salvesen, G.S.,Bode, W. Crystal Structure of the Caspase-7 / XIAP-BIR2 Complex TO BE PUBLISHED 0 0 0 0 1KN9 11741964 CRYSTAL STRUCTURE OF A BACTERIAL SIGNAL PEPTIDASE APO-ENZYME, IMPLICATIONS FOR SIGNAL PEPTIDE BINDING AND THE SER-LYS DYAD MECHANISM. 2001-12-18 2002-01-30 Paetzel, M.,Dalbey, R.E.,Strynadka, N.C.J. Crystal structure of a bacterial signal peptidase apoenzyme: implications for signal peptide binding and the Ser-Lys dyad mechanism J.Biol.Chem. 2002 277 9512 9519 1JH9 11781089 PURINE REPRESSOR MUTANT-HYPOXANTHINE-PURF OPERATOR COMPLEX 2001-06-27 2002-02-08 Huffman, J.L.,Lu, F.,Zalkin, H.,Brennan, R.G. Role of residue 147 in the gene regulatory function of the Escherichia coli purine repressor. Biochemistry 2002 41 511 520 1JHZ 11781089 Purine Repressor Mutant Corepressor Binding Domain Structure 2001-06-28 2002-02-08 Huffman, J.L.,Lu, F.,Zalkin, H.,Brennan, R.G. Role of residue 147 in the gene regulatory function of the Escherichia coli purine repressor. Biochemistry 2002 41 511 520 1JT9 12051945 Structure of the mutant F174A T form of the Glucosamine-6-Phosphate deaminase from E.coli 2001-08-20 2002-02-20 Bustos-Jaimes, I.,Sosa-Peinado, A.,Rudino-Pinera, E.,Horjales, E.,Calcagno, M.L. On the role of the conformational flexibility of the active-site lid on the allosteric kinetics of glucosamine-6-phosphate deaminase. J.Mol.Biol. 2002 319 183 189 1L3R 11896404 Crystal Structure of a Transition State Mimic of the Catalytic Subunit of cAMP-dependent Protein Kinase 2002-02-28 2002-03-20 Madhusudan,Akamine, P.,Xuong, N.H.,Taylor, S.S. Crystal structure of a transition state mimic of the catalytic subunit of cAMP-dependent protein kinase. Nat.Struct.Biol. 2002 9 273 277 1L6X 10754313 FC FRAGMENT OF RITUXIMAB BOUND TO A MINIMIZED VERSION OF THE B-DOMAIN FROM PROTEIN A CALLED Z34C 2002-03-14 2002-04-10 Idusogie, E.E.,Presta, L.G.,Gazzano-Santoro, H.,Totpal, K.,Wong, P.Y.,Ultsch, M.,Meng, Y.G.,Mulkerrin, M.G. Mapping of the C1q binding site on rituxan, a chimeric antibody with a human IgG1 Fc. J.Immunol. 2000 164 4178 4184 1K2V 11805094 E. COLI PERIPLASMIC PROTEIN FHUD COMPLEXED WITH DESFERAL 2001-09-29 2002-04-17 Clarke, T.E.,Braun, V.,Winkelmann, G.,Tari, L.W.,Vogel, H.J. X-ray crystallographic structures of the Escherichia coli periplasmic protein FhuD bound to hydroxamate-type siderophores and the antibiotic albomycin. J.Biol.Chem. 2002 277 13966 13972 1LIJ 10801355 STRUCTURE OF T. GONDII ADENOSINE KINASE BOUND TO PRODRUG 2 7-IODOTUBERCIDIN AND AMP-PCP 2002-04-17 2002-05-15 Schumacher, M.A.,Scott, D.M.,Mathews, I.I.,Ealick, S.E.,Roos, D.S.,Ullman, B.,Brennan, R.G. Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding. J.Mol.Biol. 2000 298 875 893 1I14 11258886 ANALYSIS OF AN INVARIANT ASPARTIC ACID IN HPRTS-GLUTAMIC ACID MUTANT 2001-01-30 2002-05-29 Canyuk, B.,Focia, P.J.,Eakin, A.E. The role for an invariant aspartic acid in hypoxanthine phosphoribosyltransferases is examined using saturation mutagenesis, functional analysis, and X-ray crystallography. Biochemistry 2001 40 2754 2765 6NSE BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE, H4B-FREE, CANAVANINE COMPLEX 1999-01-13 2002-05-29 Raman, C.S.,Li, H.,Martasek, P.,Masters, B.S.S.,Poulos, T.L. Crystal Structures of the Heme Domain of Bovine Endothelial Nitric Oxide Synthase Complexed with Arginine Analogues To be Published 0 0 0 0 7NSE BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE, H4B-FREE, ADMA COMPLEX 1999-01-13 2002-05-29 Raman, C.S.,Li, H.,Martasek, P.,Masters, B.S.S.,Poulos, T.L. Crystal Structures of the Heme Domain of Bovine Endothelial Nitric Oxide Synthase Complexed with Arginine Analogues To be Published 0 0 0 0 1LUV 12627943 CATALYTIC AND STRUCTURAL EFFECTS OF AMINO-ACID SUBSTITUTION AT HIS 30 IN HUMAN MANGANESE SUPEROXIDE DISMUTASE: INSERTION OF VAL CGAMMA INTO THE SUBSTRATE ACCESS CHANNEL 2002-05-23 2002-06-19 Hearn, A.S.,Stroupe, M.E.,Cabelli, D.E.,Ramilo, C.A.,Luba, J.P.,Tainer, J.A.,Nick, H.S.,Silverman, D.N. Catalytic and structural effects of amino acid substitution at histidine 30 in human manganese superoxide dismutase: insertion of valine C gamma into the substrate access channel Biochemistry 2003 42 2781 2789 1KZJ 12033935 Crystal Structure of EcTS W80G/dUMP/CB3717 Complex 2002-02-06 2002-07-03 Fritz, T.A.,Liu, L.,Finer-Moore, J.S.,Stroud, R.M. Tryptophan 80 and leucine 143 are critical for the hydride transfer step of thymidylate synthase by controlling active site access. Biochemistry 2002 41 7021 7029 1K8C 12102621 Crystal structure of dimeric xylose reductase in complex with NADP(H) 2001-10-23 2002-07-05 Kavanagh, K.L.,Klimacek, M.,Nidetzky, B.,Wilson, D.K. The structure of apo and holo forms of xylose reductase, a dimeric aldo-keto reductase from Candida tenuis. Biochemistry 2002 41 8785 8795 1IJB 12121649 The von Willebrand Factor mutant (I546V) A1 domain 2001-04-25 2002-07-10 Fukuda, K.,Doggett, T.A.,Bankston, L.A.,Cruz, M.A.,Diacovo, T.G.,Liddington, R.C. Structural basis of von Willebrand factor activation by the snake toxin botrocetin. Structure 2002 10 943 950 1KMS 12096917 HUMAN DIHYDROFOLATE REDUCTASE COMPLEXED WITH NADPH AND 6-([5-QUINOLYLAMINO]METHYL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE (SRI-9439), A LIPOPHILIC ANTIFOLATE 2001-12-17 2002-07-10 Klon, A.E.,Heroux, A.,Ross, L.J.,Pathak, V.,Johnson, C.A.,Piper, J.R.,Borhani, D.W. Atomic structures of human dihydrofolate reductase complexed with NADPH and two lipophilic antifolates at 1.09 a and 1.05 a resolution. J.Mol.Biol. 2002 320 677 693 1KNG 12121652 Crystal structure of CcmG reducing oxidoreductase at 1.14 A 2001-12-18 2002-07-17 Edeling, M.A.,Guddat, L.W.,Fabianek, R.A.,Thony-Meyer, L.,Martin, J.L. Structure of CcmG/DsbE at 1.14 A resolution: high-fidelity reducing activity in an indiscriminately oxidizing environment Structure 2002 10 973 979 1JWX 11959984 Chalcone Synthase--F215S mutant 2001-09-05 2002-07-24 Jez, J.M.,Bowman, M.E.,Noel, J.P. Expanding the biosynthetic repertoire of plant type III polyketide synthases by altering starter molecule specificity. Proc.Natl.Acad.Sci.USA 2002 99 5319 5324 1M47 12582206 Crystal Structure of Human Interleukin-2 2002-07-02 2002-07-31 Arkin, M.R.,Randal, M.,DeLano, W.L.,Hyde, J.,Luong, T.N.,Oslob, J.D.,Raphael, D.R.,Taylor, L.,Wang, J.,McDowell, R.S.,Wells, J.A.,Braisted, A.C. Binding of small molecules to an adaptive protein-protein interface. Proc.Natl.Acad.Sci.USA 2003 100 1603 1608 1M8H 12437348 inducible nitric oxide synthase with 6-nitroindazole bound 2002-07-24 2002-08-07 Rosenfeld, R.J.,Garcin, E.D.,Panda, K.,Andersson, G.,Aberg, A.,Wallace, A.V.,Morris, G.M.,Olson, A.J.,Stuehr, D.J.,Tainer, J.A.,Getzoff, E.D. Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency Biochemistry 2002 41 13915 13925 1M8I 12437348 inducible nitric oxide synthase with 5-nitroindazole bound 2002-07-24 2002-08-07 Rosenfeld, R.J.,Garcin, E.D.,Panda, K.,Andersson, G.,Aberg, A.,Wallace, A.V.,Morris, G.M.,Olson, A.J.,Stuehr, D.J.,Tainer, J.A.,Getzoff, E.D. Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency Biochemistry 2002 41 13915 13925 1M8D 12437348 inducible nitric oxide synthase with Chlorzoxazone bound 2002-07-24 2002-08-14 Rosenfeld, R.J.,Garcin, E.D.,Panda, K.,Andersson, G.,Aberg, A.,Wallace, A.V.,Morris, G.M.,Olson, A.J.,Stuehr, D.J.,Tainer, J.A.,Getzoff, E.D. Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency Biochemistry 2002 41 13915 13925 1M9R 12437348 human endothelial nitric oxide synthase with 3-Bromo-7-Nitroindazole bound 2002-07-29 2002-08-14 Rosenfeld, R.J.,Garcin, E.D.,Panda, K.,Andersson, G.,Aberg, A.,Wallace, A.V.,Morris, G.M.,Olson, A.J.,Stuehr, D.J.,Tainer, J.A.,Getzoff, E.D. Conformational Changes in Nitric Oxide Synthases Induced by Chlorzoxazone and Nitroindazoles: Crystallographic and Computational Analyses of Inhibitor Potency Biochemistry 2002 41 13915 13925 1LQ1 12176382 DNA Complexed Structure of the Key Transcription Factor Initiating Development in Sporulation Bacteria 2002-05-08 2002-08-23 Zhao, H.,Msadek, T.,Zapf, J.,Madhusudan,Hoch, J.A.,Varughese, K.I. DNA complexed structure of the key transcription factor initiating development in sporulating bacteria. Structure 2002 10 1041 1050 1KYW 12084826 Crystal Structure Analysis of Caffeic Acid/5-hydroxyferulic acid 3/5-O-methyltransferase in complex with 5-hydroxyconiferaldehyde 2002-02-06 2002-08-28 Zubieta, C.,Kota, P.,Ferrer, J.L.,Dixon, R.A.,Noel, J.P. Structural basis for the modulation of lignin monomer methylation by caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase. Plant Cell 2002 14 1265 1277 1KYZ 12084826 Crystal Structure Analysis of Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase Ferulic Acid Complex 2002-02-06 2002-08-28 Zubieta, C.,Kota, P.,Ferrer, J.L.,Dixon, R.A.,Noel, J.P. Structural basis for the modulation of lignin monomer methylation by caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase. Plant Cell 2002 14 1265 1277 1M3X 12167672 Photosynthetic Reaction Center From Rhodobacter Sphaeroides 2002-07-01 2002-08-28 Camara-Artigas, A.,Brune, D.,Allen, J.P. Interactions between lipids and bacterial reaction centers determined by protein crystallography. Proc.Natl.Acad.Sci.USA 2002 99 11055 11060 1ML7 14673714 Crystal structure of nitrophorin 4 complexed with 4-iodopyrazole 2002-08-30 2002-09-20 Berry, R.E.,Ding, X.D.,Shokhireva, T.K.,Weichsel, A.,Montfort, W.R.,Walker, F.A. Axial ligand complexes of the Rhodnius nitrophorins: reduction potentials, binding constants, EPR spectra, and structures of the 4-iodopyrazole and imidazole complexes of NP4 J.Biol.Inorg.Chem. 2004 9 135 144 1MK2 12154125 SMAD3 SBD complex 2002-08-28 2002-10-16 Qin, B.Y.,Lam, S.S.,Correia, J.J.,Lin, K. Smad3 allostery links TGF-beta receptor kinase activation to transcriptional control Genes Dev. 2002 16 1950 1963 1KBY 16228547 Structure of Photosynthetic Reaction Center with bacteriochlorophyll-bacteriopheophytin heterodimer 2001-11-07 2002-11-13 Camara-Artigas, A.,Magee, C.,Goetsch, A.,Allen, J.P. The structure of the heterodimer reaction center from Rhodobacter sphaeroides at 2.55 a resolution. Photosynth.Res. 2002 74 87 93 1N45 12500973 X-RAY CRYSTAL STRUCTURE OF HUMAN HEME OXYGENASE-1 (HO-1) IN COMPLEX WITH ITS SUBSTRATE HEME 2002-10-30 2002-11-13 Lad, L.,Schuller, D.J.,Shimizu, H.,Friedman, J.,Li, H.,Ortiz de Montellano, P.R.,Poulos, T.L. Comparison of the heme-free and -bound crystal structures of human heme oxygenase-1. J. Biol. Chem. 2003 278 7834 7843 1KF9 11851338 PHAGE DISPLAY DERIVED VARIANT OF HUMAN GROWTH HORMONE COMPLEXED WITH TWO COPIES OF THE EXTRACELLULAR DOMAIN OF ITS RECEPTOR 2001-11-19 2002-11-20 Schiffer, C.A.,Ultsch, M.,Walsh, S.,Somers, W.,De Vos, A.M.,Kossiakoff, A.A. Structure of a Phage Display Derived Variant of Human Growth Hormone Complexed to Two Copies of the Extracellular Domain of its Receptor: Evidence for Strong Structural Coupling between Receptor Binding Sites J.Mol.Biol. 2002 316 277 289 1L7D 12379117 Crystal Structure of R. rubrum Transhydrogenase Domain I without Bound NAD(H) 2002-03-14 2002-11-20 Prasad, G.S.,Wahlberg, M.,Sridhar, V.,Yamaguchi, M.,Hatefi, Y.,Stout, C.D. Crystal Structures of Transhydrogenase Domain I with and without Bound NADH Biochemistry 2002 41 12745 12754 1LAJ 12406691 The Structure of Tomato Aspermy Virus by X-Ray Crystallography 2002-03-28 2002-11-27 Lucas, R.W.,Larson, S.B.,Canady, M.A.,McPherson, A. The Structure of Tomato Aspermy Virus by X-Ray Crystallography J.STRUCT.BIOL. 2002 139 90 102 1LYQ 12459914 Crystal Structure of PcoC, a Methionine Rich Copper Resistance Protein from Escherichia coli 2002-06-07 2002-11-27 Wernimont, A.K.,Huffman, D.L.,Finney, L.A.,Demeler, B.,O'Halloran, T.V.,Rosenzweig, A.C. Crystal structure and dimerization equilibria of PcoC, a methionine-rich copper resistance protein from Escherichia coli J.BIOL.INORG.CHEM. 2003 8 185 194 1LZX 12437343 Rat neuronal NOS heme domain with NG-hydroxy-L-arginine bound 2002-06-11 2002-11-27 Li, H.,Shimizu, H.,Flinspach, M.,Jamal, J.,Yang, W.,Xian, M.,Cai, T.,Wen, E.Z.,Jia, Q.,Wang, P.G.,Poulos, T.L. The Novel Binding Mode of N-Alkyl-N'-Hydroxyguanidine to Neuronal Nitric Oxide Synthase Provides Mechanistic Insights into NO Biosynthesis Biochemistry 2002 41 13868 13875 1LZZ 12437343 Rat neuronal NOS heme domain with N-isopropyl-N'-hydroxyguanidine bound 2002-06-11 2002-11-27 Li, H.,Shimizu, H.,Flinspach, M.,Jamal, J.,Yang, W.,Xian, M.,Cai, T.,Wen, E.Z.,Jia, Q.,Wang, P.G.,Poulos, T.L. The Novel Binding Mode of N-Alkyl-N'-Hydroxyguanidine to Neuronal Nitric Oxide Synthase Provides Mechanistic Insights into NO Biosynthesis Biochemistry 2002 41 13868 13875 1M00 12437343 Rat neuronal NOS heme domain with N-butyl-N'-hydroxyguanidine bound 2002-06-11 2002-11-27 Li, H.,Shimizu, H.,Flinspach, M.,Jamal, J.,Yang, W.,Xian, M.,Cai, T.,Wen, E.Z.,Jia, Q.,Wang, P.G.,Poulos, T.L. The Novel Binding Mode of N-Alkyl-N'-Hydroxyguanidine to Neuronal Nitric Oxide Synthase Provides Mechanistic Insights into NO Biosynthesis Biochemistry 2002 41 13868 13875 1N18 12441104 Thermostable mutant of Human Superoxide Dismutase, C6A, C111S 2002-10-16 2002-11-27 Cardoso, R.M.F.,Thayer, M.M.,DiDonato, M.,Lo, T.P.,Bruns, C.K.,Getzoff, E.D.,Tainer, J.A. Insights into Lou Gehrig's disease from the structure and instability of the A4V mutant of human Cu,Zn superoxide dismutase. J.Mol.Biol. 2002 324 247 256 1N19 12441104 Structure of the HSOD A4V mutant 2002-10-16 2002-11-27 Cardoso, R.M.F.,Thayer, M.M.,DiDonato, M.,Lo, T.P.,Bruns, C.K.,Getzoff, E.D.,Tainer, J.A. Insights into Lou Gehrig's disease from the structure and instability of the A4V mutant of human Cu,Zn superoxide dismutase. J.Mol.Biol. 2002 324 247 256 1N1B 12432096 Crystal Structure of (+)-Bornyl Diphosphate Synthase from Sage 2002-10-17 2002-11-27 Whittington, D.A.,Wise, M.L.,Urbansky, M.,Coates, R.M.,Croteau, R.B.,Christianson, D.W. Bornyl Diphosphate Synthase: Structure and Strategy for Carbocation Manipulation by a Terpenoid Cyclase Proc.Natl.Acad.Sci.USA 2002 99 15375 15380 1MGQ CRYSTAL STRUCTURE OF A HEPTAMERIC SM-LIKE PROTEIN FROM METHANOBACTERIUM THERMOAUTOTROPHICUM 2002-08-16 2002-12-11 Collins, B.M.,Naidoo, N.,Harrop, S.J.,Curmi, P.M.G.,Mabbutt, B.C. Refined Structure of Sm-Like Protein Heptamer from Methanobacterium thermoautotrophicum To be published 0 0 0 0 1KJM 12470953 TAP-A-associated rat MHC class I molecule 2001-12-04 2002-12-18 Rudolph, M.G.,Stevens, J.,Speir, J.A.,Trowsdale, J.,Butcher, G.W.,Joly, E.,Wilson, I.A. Crystal structures of two rat MHC class Ia (RT1-A) molecules that are associated differentially with peptide transporter alleles TAP-A and TAP-B. J.Mol.Biol. 2002 324 975 990 1JBZ 12501176 CRYSTAL STRUCTURE ANALYSIS OF A DUAL-WAVELENGTH EMISSION GREEN FLUORESCENT PROTEIN VARIANT AT HIGH PH 2001-06-07 2003-01-07 Hanson, G.T.,McAnaney, T.B.,Park, E.S.,Rendell, M.E.P.,Yarbrough, D.K.,Chu, S.,Xi, L.,Boxer, S.G.,Montrose, M.H.,Remington, S.J. Green Fluorescent Protein Variants as Ratiometric Dual Emission pH Sensors. 1. Structural Characterization and Preliminary Application. Biochemistry 2002 41 15477 15488 1MQ5 12501180 Crystal Structure of 3-chloro-N-[4-chloro-2-[[(4-chlorophenyl)amino]carbonyl]phenyl]-4-[(4-methyl-1-piperazinyl)methyl]-2-thiophenecarboxamide Complexed with Human Factor Xa 2002-09-13 2003-01-28 Adler, M.,Kochanny, M.J.,Bin, Y.,Rumennik, G.,Light, D.L.,Biancalana, S.,Whitlow, M. Crystal Structures of Two Potent Nonamidine Inhibitors Bound to Factor Xa Biochemistry 2002 41 15514 15523 1NP7 12535521 Crystal Structure Analysis of Synechocystis sp. PCC6803 cryptochrome 2003-01-17 2003-01-28 Brudler, R.,Hitomi, K.,Daiyasu, H.,Toh, H.,Kucho, K.,Ishiura, M.,Kanehisa, M.,Roberts, V.A.,Todo, T.,Tainer, J.A.,Getzoff, E.D. Identification of a new cryptochrome class: structure, function, and evolution Mol.Cell 2003 11 59 67 1MN6 12379102 Thioesterase Domain from Picromycin Polyketide Synthase, pH 7.6 2002-09-05 2003-02-04 Tsai, S.-C.,Lu, H.,Cane, D.E.,Khosla, C.,Stroud, R.M. Insights into channel architecture and substrate specificity from crystal structures of two macrocycle-forming thioesterases of modular polyketide synthases Biochemistry 2002 41 12598 12606 1J3H 12614615 Crystal structure of apoenzyme cAMP-dependent protein kinase catalytic subunit 2003-01-31 2003-03-04 Akamine, P.,Madhusudan,Wu, J.,Xuong, N.-H.,Ten Eyck, L.F.,Taylor, S.S. Dynamic Features of cAMP-dependent Protein Kinase Revealed by Apoenzyme Crystal Structure J.Mol.Biol. 2003 327 159 171 1K2D 12150894 Crystal structure of the autoimmune MHC class II I-Au complexed with myelin basic protein 1-11 at 2.2A 2001-09-26 2003-03-04 He, X.L.,Radu, C.,Sidney, J.,Sette, A.,Ward, E.S.,Garcia, K.C. Structural snapshot of aberrant antigen presentation linked to autoimmunity: the immunodominant epitope of MBP complexed with I-Au IMMUNITY 2002 17 83 94 1K2R Structure of rat brain nNOS heme domain complexed with NG-nitro-L-arginine 2001-09-28 2003-03-04 Li, H.,Martasek, P.,Masters, B.S.S.,Poulos, T.L.,Raman, C.S. Structure of rat brain nNOS heme domain To be Published 0 0 0 0 1K2S Structure of rat brain nNOS heme domain complexed with NG-allyl-L-arginine 2001-09-28 2003-03-04 Li, H.,Martasek, P.,Masters, B.S.S.,Poulos, T.L.,Raman, C.S. Structure of rat brain nNOS heme domain To be Published 0 0 0 0 1K2T Structure of rat brain nNOS heme domain complexed with S-ethyl-N-phenyl-isothiourea 2001-09-28 2003-03-04 Li, H.,Martasek, P.,Masters, B.S.S.,Poulos, T.L.,Raman, C.S. Structure of rat brain nNOS heme domain To be Published 0 0 0 0 1K2U Structure of rat brain nNOS heme domain complexed with S-ethyl-N-[4-(trifluoromethyl)phenyl] isothiourea 2001-09-28 2003-03-04 Li, H.,Martasek, P.,Masters, B.S.S.,Poulos, T.L.,Raman, C.S. Structure of rat brain nNOS heme domain To be Published 0 0 0 0 1M99 12596270 Crystal structure of the 26 kDa glutathione S-transferase from Schistosoma japonicum complexed with glutathione sulfonic acid 2002-07-28 2003-03-04 Cardoso, R.M.F.,Daniels, D.S.,Bruns, C.M.,Tainer, J.A. Characterization of the electrophile binding site and substrate binding mode of the 26-kDa glutathione S-transferase from Schistosoma japonicum PROTEINS: STRUCT.,FUNCT.,GENET 2003 51 137 146 1M9A 12596270 Crystal structure of the 26 kDa glutathione S-transferase from Schistosoma japonicum complexed with S-hexylglutathione 2002-07-28 2003-03-04 Cardoso, R.M.F.,Daniels, D.S.,Bruns, C.M.,Tainer, J.A. Characterization of the electrophile binding site and substrate binding mode of the 26-kDa glutathione S-transferase from Schistosoma japonicum PROTEINS: STRUCT.,FUNCT.,GENET 2003 51 137 146 1NMS 12563278 Caspase-3 tethered to irreversible inhibitor 2003-01-10 2003-03-11 Erlanson, D.A.,Lam, J.W.,Wiesmann, C.,Luong, T.N.,Simmons, R.L.,DeLano, W.L.,Choong, I.C.,Burdett, M.T.,Flanagan, W.M.,Lee, D.,Gordon, E.M.,O'Brien, T. In situ assembly of enzyme inhibitors using extended tethering. Nat.Biotechnol. 2003 21 308 314 1OM4 STRUCTURE OF RAT NEURONAL NOS HEME DOMAIN WITH L-ARGININE BOUND 2003-02-24 2003-03-11 Li, H.,Martasek, P.,Shimizu, H.,Masters, B.S.S.,Poulos, T.L.,Raman, C.S. Structure of Rat Neuronal NOS Heme Domain with L-Arginine Bound To be Published 0 0 0 0 1OM5 STRUCTURE OF RAT NEURONAL NOS HEME DOMAIN WITH 3-BROMO-7-NITROINDAZOLE BOUND 2003-02-24 2003-03-11 Li, H.,Martasek, P.,Masters, B.S.S.,Poulos, T.L.,Raman, C.S. Structure of Rat Neuronal NOS Heme Domain with 3-Bromo-7-Nitroindazole Bound To be Published 0 0 0 0 1NWL 12733877 Crystal structure of the PTP1B complexed with SP7343-SP7964, a pTyr mimetic 2003-02-06 2003-04-01 Erlanson, D.A.,McDowell, R.S.,He, M.M.,Randal, M.,Simmons, R.L.,Kung, J.,Waight, A.,Hansen, S. Discovery of a New Phosphotyrosine Mimetic for PTP1B Using Breakaway Tethering J.Am.Chem.Soc. 2003 125 5602 5603 1MX5 12679808 Crystal Structure of Human Liver Carboxylesterase in complexed with homatropine, a cocaine analogue 2002-10-01 2003-04-08 Bencharit, S.,Morton, C.L.,Xue, Y.,Potter, P.M.,Redinbo, M.R. Structural Basis of Heroin and Cocaine Metabolism by a Promiscuous Human Drug-Processing Enzyme Nat.Struct.Biol. 2003 10 349 356 1NQ2 12554782 Two RTH Mutants with Impaired Hormone Binding 2003-01-21 2003-04-15 Huber, B.R.,Sandler, B.,West, B.L.,Cunha-Lima, S.T.,Nguyen, H.T.,Apriletti, J.W.,Baxter, J.D.,Fletterick, R.J. Two resistance to thyroid hormone mutants with impaired hormone binding Mol.Endocrinol. 2003 17 643 652 1M35 12777807 Aminopeptidase P from Escherichia coli 2002-06-27 2003-05-06 Graham, S.C.,Lee, M.,Freeman, H.C.,Guss, J.M. An orthorhombic form of Escherichia coli aminopeptidase P at 2.4 A resolution. Acta Crystallogr.,Sect.D 2003 59 897 902 1MF7 12611591 INTEGRIN ALPHA M I DOMAIN 2002-08-09 2003-05-20 McCleverty, C.J.,Liddington, R.C. Engineered allosteric mutants of the integrin alphaMbeta2 I domain: structural and functional studies Biochem.J. 2003 372 121 127 1OSF 12725864 Human Hsp90 in complex with 17-desmethoxy-17-N,N-Dimethylaminoethylamino-Geldanamycin 2003-03-19 2003-05-27 Jez, J.M.,Chen, J.C.,Rastelli, G.,Stroud, R.M.,Santi, D.V. Crystal Structure and Molecular Modeling of 17-DMAG in Complex with Human Hsp90 Chem.Biol. 2003 10 361 368 1OSG 12755599 Complex between BAFF and a BR3 derived peptide presented in a beta-hairpin scaffold 2003-03-19 2003-05-27 Gordon, N.C.,Pan, B.,Hymowitz, S.G.,Yin, J.P.,Kelley, R.F.,Cochran, A.G.,Yan, M.,Dixit, V.M.,Fairbrother, W.J.,Starovasnik, M.A. BAFF/BLyS receptor 3 comprises a minimal TNF receptor-like module that encodes a highly focused ligand-binding site Biochemistry 2003 42 5977 5983 1QB5 ESCHERICHIA COLI HEAT LABILE ENTEROTOXIN TYPE IIB B-PENTAMER 1999-04-30 2003-06-10 Merritt, E.A.,Van den Akker, F.,Connell, T.D.,Holmes, R.K.,Hol, W.G.J. Crystal Structures of the B-Pentamer from E. coli Enterotoxin LT-IIb To be Published 0 0 0 0 1LLN 12754107 1.6A CRYSTAL STRUCTURE OF POKEWEED ANTIVIRAL PROTEIN-III (PAP-III) WITH METHYLATED LYSINES 2002-04-29 2003-06-17 Kurinov, I.V.,Uckun, F.M. High resolution X-ray structure of potent anti-HIV pokeweed antiviral protein-III Biochem.Pharm. 2003 65 1709 1717 1P8R 12820884 Structural and Functional Importance of First-Shell Metal Ligands in the Binuclear Manganese Cluster of Arginase I. 2003-05-07 2003-06-17 Cama, E.,Emig, F.A.,Ash, D.E.,Christianson, D.W. Structural and functional importance of first-shell metal ligands in the binuclear manganese cluster of arginase I Biochemistry 2003 42 7748 7758 1PIU OXIDIZED RIBONUCLEOTIDE REDUCTASE R2-D84E MUTANT CONTAINING OXO-BRIDGED DIFERRIC CLUSTER 2003-05-30 2003-06-17 Voegtli, W.C.,Khidekel, N.,Baldwin, J.,Ley, B.A.,Bollinger Jr., J.M.,Rosenzweig, A.C. Crystal Structure of the Ribonucleotide Reductase R2 Mutant that Accumulates a u-1,2-Peroxodiiron(III) Intermediate during Oxygen Activation J.Am.Chem.Soc. 2000 122 3255 3261 1HXC CRYSTAL STRUCTURE OF TEAS C440W 2001-01-12 2003-06-24 Starks, C.S.,Rising, K.A.,Chappell, J.,Noel, J.P. Single Active Site Mutations Change the Specificity of a Sesquiterpene Cyclase To be Published 0 0 0 0 1NYK 12809486 Crystal Structure of the Rieske protein from Thermus thermophilus 2003-02-12 2003-06-24 Hunsicker-Wang, L.M.,Heine, A.,Chen, Y.,Luna, E.P.,Todaro, T.,Zhang, Y.M.,Williams, P.A.,McRee, D.E.,Hirst, J.,Stout, C.D.,Fee, J.A. High resolution structure of the soluble, respiratory-type Rieske protein from Thermus thermophilus: Analysis and Comparison Biochemistry 2003 42 7303 7317 1OYU 12869697 Long-Distance conformational changes in a protein engineered by modulated sequence duplication 2003-04-07 2003-07-08 Sagermann, M.,Gay, L.,Matthews, B.W. Long-distance conformational changes in a protein engineered by modulated sequence duplication Proc.Natl.Acad.Sci.USA 2003 100 9191 9195 1M6D 12225749 Crystal structure of human cathepsin F 2002-07-15 2003-07-15 Somoza, J.R.,Palmer, J.T.,Ho, J.D. The crystal structure of human cathepsin F and its implications for the development of novel immunomodulators J.Mol.Biol. 2002 322 559 568 1OYV 12684499 Crystal structure of tomato inhibitor-II in a ternary complex with subtilisin Carlsberg 2003-04-07 2003-07-15 Barrette-Ng, I.H.,Ng, K.K.,Cherney, M.M.,Pearce, G.,Ryan, C.A.,James, M.N. Structural basis of inhibition revealed by a 1:2 complex of the two-headed tomato inhibitor-II and subtilisin Carlsberg J.Biol.Chem. 2003 278 24062 24071 1PYB 11101501 Crystal Structure of Aquifex aeolicus Trbp111: a Structure-Specific tRNA Binding Protein 2003-07-08 2003-08-05 Swairjo, M.A.,Morales, A.J.,Wang, C.C.,Ortiz, A.R.,Schimmel, P. Crystal structure of trbp111: a structure-specific tRNA-binding protein. Embo J. 2000 19 6287 6298 1P15 12834342 Crystal structure of the D2 domain of RPTPa 2003-04-11 2003-08-19 Sonnenburg, E.D.,Bilwes, A.,Hunter, T.,Noel, J.P. The structure of the membrane distal phosphatase domain of RPTPalpha reveals interdomain flexibility and an SH2 domain interaction region. Biochemistry 2003 42 7904 7914 1JC0 14722062 CRYSTAL STRUCTURE ANALYSIS OF A REDOX-SENSITIVE GREEN FLUORESCENT PROTEIN VARIANT IN A REDUCED FORM 2001-06-07 2003-09-09 Hanson, G.T.,Aggeler, R.,Oglesbee, D.,Cannon, M.,Capaldi, R.A.,Tsien, R.Y.,Remington, S.J. Investigating mitochondrial redox potential with redox-sensitive green fluorescent protein indicators. J.Biol.Chem. 2004 279 13044 13053 1JC1 14722062 CRYSTAL STRUCTURE ANALYSIS OF A REDOX-SENSITIVE GREEN FLUORESCENT PROTEIN VARIANT IN A OXIDIZED FORM 2001-06-07 2003-09-09 Hanson, G.T.,Aggeler, R.,Oglesbee, D.,Cannon, M.,Capaldi, R.A.,Tsien, R.Y.,Remington, S.J. Investigating mitochondrial redox potential with redox-sensitive green fluorescent protein indicators. J.Biol.Chem. 2004 279 13044 13053 1OV8 12925783 Auracyanin B structure in space group, P65 2003-03-25 2003-09-09 Lee, M.,Maher, M.J.,Freeman, H.C.,Guss, J.M. Auracyanin B structure in space group P6(5). Acta Crystallogr.,Sect.D 2003 59 1545 1550 1P7T 12930982 Structure of Escherichia coli malate synthase G:pyruvate:acetyl-Coenzyme A abortive ternary complex at 1.95 angstrom resolution 2003-05-05 2003-09-09 Anstrom, D.M.,Kallio, K.,Remington, S.J. Structure of the Escherichia Coli Malate Synthase G:pyruvate:acetyl-coenzyme A Abortive Ternary Complex at 1.95 Angstrom Resolution Protein Sci. 2003 12 1822 1832 1PU0 12963370 Structure of Human Cu,Zn Superoxide Dismutase 2003-06-23 2003-09-09 DiDonato, M.,Craig, L.,Huff, M.E.,Thayer, M.M.,Cardoso, R.M.F.,Kassmann, C.J.,Lo, T.P.,Bruns, C.K.,Powers, E.T.,Kelly, J.W.,Getzoff, E.D.,Tainer, J.A. ALS Mutants of Human Superoxide Dismutase Form Fibrous Aggregates Via Framework Destabilization J.Mol.Biol. 2003 332 601 615 1MMV 12960153 Rat neuronal NOS heme domain with NG-propyl-L-arginine bound 2002-09-04 2003-09-16 Bretscher, L.E.,Li, H.,Poulos, T.L.,Griffith, O.W. Structural characterization and kinetics of nitric-oxide synthase inhibition by novel N5-(iminoalkyl)- and N5-(iminoalkenyl)-ornithines J.Biol.Chem. 2003 278 46789 46797 1MMW 12960153 Rat neuronal NOS heme domain with vinyl-L-NIO bound 2002-09-04 2003-09-16 Bretscher, L.E.,Li, H.,Poulos, T.L.,Griffith, O.W. Structural characterization and kinetics of nitric-oxide synthase inhibition by novel N5-(iminoalkyl)- and N5-(iminoalkenyl)-ornithines J.Biol.Chem. 2003 278 46789 46797 1ND4 12628253 Crystal structure of aminoglycoside-3'-phosphotransferase-IIa 2002-12-06 2003-09-16 Nurizzo, D.,Shewry, S.C.,Perlin, M.H.,Brown, S.A.,Dholakia, J.N.,Fuchs, R.L.,Deva, T.,Baker, E.N.,Smith, C.A. The crystal structure of aminoglycoside-3'-phosphotransferase-IIa, an enzyme responsible for antibiotic resistance J.Mol.Biol. 2003 327 491 506 1QYG 15885702 ANTI-COCAINE ANTIBODY M82G2 COMPLEXED WITH BENZOYLECGONINE 2003-09-10 2003-09-23 Pozharski, E.,Moulin, A.,Hewagama, A.,Shanafelt, A.B.,Petsko, G.A.,Ringe, D. Diversity in hapten recognition: structural study of an anti-cocaine antibody M82G2. J.Mol.Biol. 2005 349 570 582 1PQK 12963380 Repacking of the Core of T4 Lysozyme by Automated Design 2003-06-18 2003-10-07 Mooers, B.H.,Datta, D.,Baase, W.A.,Zollars, E.S.,Mayo, S.L.,Matthews, B.W. Repacking the Core of T4 Lysozyme by Automated Design J.Mol.Biol. 2003 332 741 756 1QX3 12833566 Conformational restrictions in the active site of unliganded human caspase-3 2003-09-04 2003-10-07 Ni, C.-Z.,Li, C.,Wu, J.C.,Spada, A.P.,Ely, K.R. Conformational restrictions in the active site of unliganded human caspase-3 J.MOL.RECOG. 2003 16 121 124 1OQQ 14529624 Crystal structure of C73S/C85S mutant of putidaredoxin, a [2Fe-2S] ferredoxin from Pseudomonas putida, at 1.47A resolution 2003-03-10 2003-11-04 Sevrioukova, I.F.,Garcia, C.,Li, H.,Bhaskar, B.,Poulos, T.L. Crystal structure of putidaredoxin, the [2Fe-2S] component of the P450cam monooxygenase system from Pseudomonas putida J.MOL.BIOL. 2003 333 377 392 1OQR 14529624 Crystal structure of C73S mutant of putidaredoxin, a [2Fe-2S] ferredoxin from Pseudomonas putida, at 1.65A resolution 2003-03-10 2003-11-04 Sevrioukova, I.F.,Garcia, C.,Li, H.,Bhaskar, B.,Poulos, T.L. Crystal structure of putidaredoxin, the [2Fe-2S] component of the P450cam monooxygenase system from Pseudomonas putida J.MOL.BIOL. 2003 333 377 392 1RFD 15885702 ANTI-COCAINE ANTIBODY M82G2 2003-11-07 2003-11-18 Pozharski, E.,Moulin, A.,Hewagama, A.,Shanafelt, A.B.,Petsko, G.A.,Ringe, D. Diversity in hapten recognition: structural study of an anti-cocaine antibody M82G2. J.Mol.Biol. 2005 349 570 582 1RJ7 14656435 Crystal structure of EDA-A1 2003-11-18 2003-12-09 Hymowitz, S.G.,Compaan, D.M.,Yan, M.,Wallweber, H.J.,Dixit, V.M.,Starovasnik, M.A.,de Vos, A.M. The crystal structures of EDA-A1 and EDA-A2: splice variants with distinct receptor specificity. Structure 2003 11 1513 1520 1NE4 15157095 Crystal Structure of Rp-cAMP Binding R1a Subunit of cAMP-dependent Protein Kinase 2002-12-10 2004-01-13 Wu, J.,Jones, J.M.,Xuong, N.H.,Eyck, L.F.,Taylor, S.S. Crystal Structures of RIalpha Subunit of Cyclic Adenosine 5'-Monophosphate (cAMP)-Dependent Protein Kinase Complexed with (R(p))-Adenosine 3',5'-Cyclic Monophosphothioate and (S(p))-Adenosine 3',5'-Cyclic Monophosphothioate, the Phosphothioate Analogues of cAMP. Biochemistry 2004 43 6620 6629 1NE6 15157095 Crystal structure of Sp-cAMP binding R1a subunit of cAMP-dependent protein kinase 2002-12-10 2004-01-13 Wu, J.,Jones, J.M.,Xuong, N.H.,Eyck, L.F.,Taylor, S.S. Crystal Structures of RIalpha Subunit of Cyclic Adenosine 5'-Monophosphate (cAMP)-Dependent Protein Kinase Complexed with (R(p))-Adenosine 3',5'-Cyclic Monophosphothioate and (S(p))-Adenosine 3',5'-Cyclic Monophosphothioate, the Phosphothioate Analogues of cAMP. Biochemistry 2004 43 6620 6629 1P6I 14718923 Rat neuronal NOS heme domain with (4S)-N-(4-amino-5-[aminoethyl]aminopentyl)-N'-nitroguanidine bound 2003-04-29 2004-01-13 Flinspach, M.L.,Li, H.,Jamal, J.,Yang, W.,Huang, H.,Hah, J.M.,Gomez-Vidal, J.A.,Litzinger, E.A.,Silverman, R.B.,Poulos, T.L. Structural basis for dipeptide amide isoform-selective inhibition of neuronal nitric oxide synthase. Nat.Struct.Mol.Biol. 2004 11 54 59 1P6L 14718923 Bovine endothelial NOS heme domain with L-N(omega)-nitroarginine-2,4-L-diaminobutyric amide bound 2003-04-29 2004-01-13 Flinspach, M.L.,Li, H.,Jamal, J.,Yang, W.,Huang, H.,Hah, J.M.,Gomez-Vidal, J.A.,Litzinger, E.A.,Silverman, R.B.,Poulos, T.L. Structural basis for dipeptide amide isoform-selective inhibition of neuronal nitric oxide synthase. Nat.Struct.Mol.Biol. 2004 11 54 59 1P6M 14718923 Bovine endothelial NOS heme domain with (4S)-N-(4-amino-5-[aminoethyl]aminopentyl)-N'-nitroguanidine bound 2003-04-29 2004-01-13 Flinspach, M.L.,Li, H.,Jamal, J.,Yang, W.,Huang, H.,Hah, J.M.,Gomez-Vidal, J.A.,Litzinger, E.A.,Silverman, R.B.,Poulos, T.L. Structural basis for dipeptide amide isoform-selective inhibition of neuronal nitric oxide synthase. Nat.Struct.Mol.Biol. 2004 11 54 59 1P6N 14718923 Bovine endothelial NOS heme domain with L-N(omega)-nitroarginine-(4R)-amino-L-proline amide bound 2003-04-29 2004-01-13 Flinspach, M.L.,Li, H.,Jamal, J.,Yang, W.,Huang, H.,Hah, J.M.,Gomez-Vidal, J.A.,Litzinger, E.A.,Silverman, R.B.,Poulos, T.L. Structural basis for dipeptide amide isoform-selective inhibition of neuronal nitric oxide synthase. Nat.Struct.Mol.Biol. 2004 11 54 59 1PQ2 14676196 Crystal Structure of Human Drug Metabolizing Cytochrome P450 2C8 2003-06-17 2004-01-13 Schoch, G.A.,Yano, J.K.,Wester, M.R.,Griffin, K.J.,Stout, C.D.,Johnson, E.F. Structure of human microsomal cytochrome P450 2C8. Evidence for a peripheral fatty acid binding site J.Biol.Chem. 2004 279 9497 9503 1PWQ 14718924 Crystal structure of Anthrax Lethal Factor complexed with Thioacetyl-Tyr-Pro-Met-Amide, a metal-chelating peptidyl small molecule inhibitor 2003-07-02 2004-01-13 Turk, B.E.,Wong, T.Y.,Schwarzenbacher, R.,Jarrell, E.T.,Leppla, S.H.,Collier, R.J.,Liddington, R.C.,Cantley, L.C. The structural basis for substrate and inhibitor selectivity of the anthrax lethal factor. Nat.Struct.Mol.Biol. 2004 11 60 66 1PY2 14664558 Structure of a 60 nM Small Molecule Bound to a Hot Spot on IL-2 2003-07-07 2004-01-13 Thanos, C.D.,Randal, M.,Wells, J.A. Potent small-molecule binding to a dynamic hot spot on IL-2. J.Am.Chem.Soc. 2003 125 15280 15281 1Q9B 14715255 CRYSTAL STRUCTURE ANALYSIS OF Hev b 6.02 (HEVEIN) AT 1.5 ANGSTROMS RESOLUTION 2003-08-22 2004-01-13 Reyes-Lopez, C.A.,Hernandez-Santoyo, A.,Pedraza-Escalona, M.,Mendoza, G.,Hernandez-Arana, A.,Rodriguez-Romero, A. Insights into a conformational epitope of Hev b 6.02 (hevein). Biochem.Biophys.Res.Commun. 2004 314 123 130 1RV6 14684734 Crystal Structure of PlGF in Complex with Domain 2 of VEGFR1 2003-12-12 2004-01-20 Christinger, H.W.,Fuh, G.,de Vos, A.M.,Wiesmann, C. The crystal structure of placental growth factor in complex with domain 2 of vascular endothelial growth factor receptor-1. J.Biol.Chem. 2004 279 10382 10388 1Q4D 14684834 S65T Q80R T203C Green Fluorescent Protein (GFP) pH 5.5 2003-08-02 2004-02-03 Jain, R.K.,Ranganathan, R. Local complexity of amino acid interactions in a protein core. Proc.Natl.Acad.Sci.USA 2004 101 111 116 1Q73 14684834 S65T Q80R Y145C T203C Green Fluorescent Protein (GFP) pH 8.5 2003-08-15 2004-02-03 Jain, R.K.,Ranganathan, R. Local complexity of amino acid interactions in a protein core. Proc.Natl.Acad.Sci.USA 2004 101 111 116 1PVP 14652076 BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, ALSHG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 2003-06-28 2004-02-17 Baldwin, E.P.,Martin, S.S.,Abel, J.,Gelato, K.A.,Kim, H.,Schultz, P.G.,Santoro, S.W. A specificity switch in selected cre recombinase variants is mediated by macromolecular plasticity and water. Chem.Biol. 2003 10 1085 1094 1PVQ 14652076 BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 2003-06-28 2004-02-17 Baldwin, E.P.,Martin, S.S.,Abel, J.,Gelato, K.A.,Kim, H.,Schultz, P.G.,Santoro, S.W. A specificity switch in selected cre recombinase variants is mediated by macromolecular plasticity and water. Chem.Biol. 2003 10 1085 1094 1PVR 14652076 BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE LOXP (WILDTYPE) RECOGNITION SITE 2003-06-28 2004-02-17 Baldwin, E.P.,Martin, S.S.,Abel, J.,Gelato, K.A.,Kim, H.,Schultz, P.G.,Santoro, S.W. A specificity switch in selected cre recombinase variants is mediated by macromolecular plasticity and water. Chem.Biol. 2003 10 1085 1094 1PZG 14744130 T.gondii LDH1 complexed with APAD and sulfate at 1.6 Angstroms 2003-07-10 2004-02-24 Kavanagh, K.L.,Elling, R.A.,Wilson, D.K. Structure of Toxoplasma gondii LDH1: Active-Site Differences from Human Lactate Dehydrogenases and the Structural Basis for Efficient APAD+ Use. Biochemistry 2004 43 879 889 1Q1R 15095867 Crystal Structure of Putidaredoxin Reductase from Pseudomonas putida 2003-07-22 2004-02-24 Sevrioukova, I.F.,Li, H.,Poulos, T.L. Crystal structure of putidaredoxin reductase from Pseudomonas putida, the final structural component of the cytochrome P450cam monooxygenase. J.Mol.Biol. 2004 336 889 902 1RE8 14705934 Crystal structure of cAMP-dependent protein kinase complexed with balanol analog 2 2003-11-06 2004-02-24 Akamine, P.,Madhusudan,Brunton, L.L.,Ou, H.D.,Canaves, J.M.,Xuong, N.H.,Taylor, S.S. Balanol analogues probe specificity determinants and the conformational malleability of the cyclic 3',5'-adenosine monophosphate-dependent protein kinase catalytic subunit Biochemistry 2004 43 85 96 1R5W 14690592 Evidence that structural rearrangements and/or flexibility during TCR binding can contribute to T-cell activation 2003-10-13 2004-03-02 Krogsgaard, M.,Prado, N.,Adams, E.J.,He, X.L.,Chow, D.C.,Wilson, D.B.,Garcia, K.C.,Davis, M.M. Evidence that structural rearrangements and/or flexibility during TCR binding can contribute to T cell activation Mol.Cell 2003 12 1367 1378 1Q1S 12852786 Mouse Importin alpha- phosphorylated SV40 CN peptide complex 2003-07-22 2004-03-30 Fontes, M.R.M.,Teh, T.,Toth, G.,John, A.,Pavo, I.,Jans, D.A.,Kobe, B. Role of flanking sequences and phosphorylation in the recognition of the simian-virus-40 large T-antigen nuclear localization sequences by importin-alpha Biochem.J. 2003 375 339 349 1Q1T 12852786 Mouse Importin alpha: non-phosphorylated SV40 CN peptide complex 2003-07-22 2004-03-30 Fontes, M.R.M.,Teh, T.,Toth, G.,John, A.,Pavo, I.,Jans, D.A.,Kobe, B. Role of flanking sequences and phosphorylation in the recognition of the simian-virus-40 large T-antigen nuclear localization sequences by importin-alpha Biochem.J. 2003 375 339 349 1SUZ 15170321 The structure of K92A EcoRV bound to cognate DNA and Mg2+ 2004-03-26 2004-04-06 Horton, N.C.,Perona, J.J. DNA Cleavage by EcoRV Endonuclease: Two Metal Ions in Three Metal Ion Binding Sites. Biochemistry 2004 43 6841 6857 1RDQ 14757059 Hydrolysis of ATP in the crystal of Y204A mutant of cAMP-dependent protein kinase 2003-11-05 2004-04-13 Yang, J.,Ten Eyck, L.F.,Xuong, N.H.,Taylor, S.S. Crystal Structure of a cAMP-dependent Protein Kinase Mutant at 1.26A: New Insights into the Catalytic Mechanism. J.Mol.Biol. 2004 336 473 487 1S6V 15071191 Structure of a cytochrome c peroxidase-cytochrome c site specific cross-link 2004-01-27 2004-04-27 Guo, M.,Bhaskar, B.,Li, H.,Barrows, T.P.,Poulos, T.L. Crystal structure and characterization of a cytochrome c peroxidase-cytochrome c site-specific cross-link Proc.Natl.Acad.Sci.USA 2004 101 5940 5945 1P18 14698288 Hypoxanthine Phosphoribosyltransferase from Trypanosoma cruzi, K68R mutant, ternary substrates complex 2003-04-11 2004-05-18 Canyuk, B.,Medrano, F.J.,Wenck, M.A.,Focia, P.J.,Eakin, A.E.,Craig III, S.P. Interactions at the dimer interface influence the relative efficiencies for purine nucleotide synthesis and pyrophosphorolysis in a phosphoribosyltransferase J.Mol.Biol. 2004 335 905 921 1RS6 15122883 Rat neuronal NOS heme domain with D-lysine-D-nitroarginine amide bound 2003-12-09 2004-05-18 Flinspach, M.,Li, H.,Jamal, J.,Yang, W.,Huang, H.,Silverman, R.B.,Poulos, T.L. Structures of the Neuronal and Endothelial Nitric Oxide Synthase Heme Domain with d-Nitroarginine-Containing Dipeptide Inhibitors Bound. Biochemistry 2004 43 5181 5187 1SEJ 16511011 Crystal Structure of Dihydrofolate Reductase-Thymidylate Synthase from Cryptosporidium hominis Bound to 1843U89/NADPH/dUMP 2004-02-17 2004-05-18 Anderson, A.C. Two crystal structures of dihydrofolate reductase-thymidylate synthase from Cryptosporidium hominis reveal protein-ligand interactions including a structural basis for observed antifolate resistance. Acta Crystallogr.,Sect.F 2005 61 258 262 1RS8 15122883 Bovine endothelial NOS heme domain with D-lysine-D-nitroarginine amide bound 2003-12-09 2004-06-15 Flinspach, M.,Li, H.,Jamal, J.,Yang, W.,Huang, H.,Silverman, R.B.,Poulos, T.L. Structures of the neuronal and endothelial nitric oxide synthase heme domain with D-nitroarginine-containing dipeptide inhibitors bound. Biochemistry 2004 43 5181 5187 1RS9 15122883 Bovine endothelial NOS heme domain with D-phenylalanine-D-nitroarginine amide bound 2003-12-09 2004-06-15 Flinspach, M.,Li, H.,Jamal, J.,Yang, W.,Huang, H.,Silverman, R.B.,Poulos, T.L. Structures of the neuronal and endothelial nitric oxide synthase heme domain with D-nitroarginine-containing dipeptide inhibitors bound. Biochemistry 2004 43 5181 5187 1S1M 15157079 Crystal Structure of E. Coli CTP Synthetase 2004-01-06 2004-06-15 Endrizzi, J.A.,Kim, H.,Anderson, P.M.,Baldwin, E.P. Crystal Structure of Escherichia coli Cytidine Triphosphate Synthetase, a Nucleotide-Regulated Glutamine Amidotransferase/ATP-Dependent Amidoligase Fusion Protein and Homologue of Anticancer and Antiparasitic Drug Targets Biochemistry 2004 43 6447 6463 1SJM 15131305 Nitrite bound copper containing nitrite reductase 2004-03-03 2004-06-22 Tocheva, E.I.,Rosell, F.I.,Mauk, A.G.,Murphy, M.E. Side-on copper-nitrosyl coordination by nitrite reductase. Science 2004 304 867 870 1SNR 15131305 Nitric oxide bound to Cu nitrite reductase 2004-03-11 2004-06-22 Tocheva, E.I.,Rosell, F.I.,Mauk, A.G.,Murphy, M.E. Side-on copper-nitrosyl coordination by nitrite reductase. Science 2004 304 867 870 1J9C Crystal Structure of tissue factor-factor VIIa complex 2001-05-24 2004-07-27 Huang, M.,Ruf, W.,Edgington, T.S.,Wilson, I.A. Ligand Induced Conformational Transitions of Tissue Factor. Crystal Structure of the Tissue Factor:Factor VIIa Complex. To be Published 0 0 0 0 1QVT 15257299 CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING TRANSCRIPTIONAL REPRESSOR QACR BOUND TO THE DRUG PROFLAVINE 2003-08-28 2004-08-03 Schumacher, M.A.,Miller, M.C.,Brennan, R.G. Structural mechanism of the simultaneous binding of two drugs to a multidrug-binding protein Embo J. 2004 23 2923 2930 1PFF Crystal Structure of Homocysteine alpha-, gamma-lyase at 1.8 Angstroms 2003-05-26 2004-08-10 0 0 0 0 1TZO 15326297 Crystal Structure of the Anthrax Toxin Protective Antigen Heptameric Prepore 2004-07-10 2004-08-17 Lacy, D.B.,Wigelsworth, D.J.,Melnyk, R.A.,Harrison, S.C.,Collier, R.J. Structure of heptameric protective antigen bound to an anthrax toxin receptor: A role for receptor in pH-dependent pore formation Proc.Natl.Acad.Sci.USA 2004 101 13147 13151 1U46 15308621 Crystal Structure of the Unphosphorylated Kinase Domain of the Tyrosine Kinase ACK1 2004-07-23 2004-08-31 Lougheed, J.C.,Chen, R.H.,Mak, P.,Stout, T.J. Crystal Structures of the Phosphorylated and Unphosphorylated Kinase Domains of the Cdc42-associated Tyrosine Kinase ACK1. J.Biol.Chem. 2004 279 44039 44045 1SII 15323556 AGAO in covalent complex with the inhibitor NOBA (""4-(2-naphthyloxy)-2-butyn-1-amine"") 2004-02-29 2004-09-07 O'Connell, K.M.,Langley, D.B.,Shepard, E.M.,Duff, A.P.,Jeon, H.B.,Sun, G.,Freeman, H.C.,Guss, J.M.,Sayre, L.M.,Dooley, D.M. Differential Inhibition of Six Copper Amine Oxidases by a Family of 4-(Aryloxy)-2-butynamines: Evidence for a New Mode of Inactivation. Biochemistry 2004 43 10965 10978 1R38 15109252 Crystal structure of H114A mutant of Candida tenuis xylose reductase 2003-09-30 2004-10-12 Kratzer, R.,Kavanagh, K.L.,Wilson, D.K.,Nidetzky, B. Studies of the enzymic mechanism of Candida tenuis xylose reductase (AKR 2B5): X-ray structure and catalytic reaction profile for the H113A mutant Biochemistry 2004 43 4944 4954 1RUT 15343268 Complex of LMO4 LIM domains 1 and 2 with the ldb1 LID domain 2003-12-11 2004-10-12 Deane, J.E.,Ryan, D.P.,Sunde, M.,Maher, M.J.,Guss, J.M.,Visvader, J.E.,Matthews, J.M. Tandem LIM domains provide synergistic binding in the LMO4:Ldb1 complex Embo J. 2004 23 3589 3598 1Y28 12820879 Crystal structure of the R220A metBJFIXL HEME domain 2004-11-21 2004-12-07 Dunham, C.M.,Dioum, E.M.,Tuckerman, J.R.,Gonzalez, G.,Scott, W.G.,Gilles-Gonzalez, M.A. A distal arginine in the oxygen-sensing heme-PAS domains is essential to ligand binding, signal transduction, and structure Biochemistry 2003 42 7701 7708 1XUP 14717590 ENTEROCOCCUS CASSELIFLAVUS GLYCEROL KINASE COMPLEXED WITH GLYCEROL 2004-10-26 2004-12-14 Yeh, J.I.,Charrier, V.,Paulo, J.,Hou, L.,Darbon, E.,Clairborn, A.,Hol, W.G.J.,Deutscher, J. Structures of Enterococcal Glycerol Kinase in the Absence and Presence of Glycerol: Correlation of Conformation to Substrate Binding and a Mechanism of Activation by Phosphorylation Biochemistry 2004 43 362 367 1RWK 16511067 Crystal structure of human caspase-1 in complex with 3-(2-mercapto-acetylamino)-4-oxo-pentanoic acid 2003-12-16 2004-12-28 O'Brien, T.,Fahr, B.T.,Sopko, M.M.,Lam, J.W.,Waal, N.D.,Raimundo, B.C.,Purkey, H.E.,Pham, P.,Romanowski, M.J. Structural analysis of caspase-1 inhibitors derived from Tethering. Acta Crystallogr.,Sect.F 2005 61 451 458 1RWN 16511067 Crystal structure of human caspase-1 in complex with 3-{2-ethyl-6-[4-(quinoxalin-2-ylamino)-benzoylamino]-hexanoylamino}-4-oxo-butyric acid 2003-12-16 2004-12-28 O'Brien, T.,Fahr, B.T.,Sopko, M.M.,Lam, J.W.,Waal, N.D.,Raimundo, B.C.,Purkey, H.E.,Pham, P.,Romanowski, M.J. Structural analysis of caspase-1 inhibitors derived from Tethering. Acta Crystallogr.,Sect.F 2005 61 451 458 1RWO 16511067 Crystal structure of human caspase-1 in complex with 4-oxo-3-{6-[4-(quinoxalin-2-ylamino)-benzoylamino]-2-thiophen-2-yl-hexanoylamino}-pentanoic acid 2003-12-16 2004-12-28 O'Brien, T.,Fahr, B.T.,Sopko, M.M.,Lam, J.W.,Waal, N.D.,Raimundo, B.C.,Purkey, H.E.,Pham, P.,Romanowski, M.J. Structural analysis of caspase-1 inhibitors derived from Tethering. Acta Crystallogr.,Sect.F 2005 61 451 458 1RWV Crystal structure of human caspase-1 in complex with 5-[5-(1-carboxymethyl-2-oxo-propylcarbamoyl)-5-phenyl-pentylsulfamoyl]-2-hydroxy-benzoic acid 2003-12-17 2004-12-28 O'Brien, T.,Fahr, B.T.,Sopko, M.M.,Lam, J.W.,Waal, N.D.,Raimundo, B.C.,Purkey, H.E.,Pham, P.,Romanowski, M.J. Novel Caspase-1 Inhibitors Discovered Using Tethering(SM) with Extenders TO BE PUBLISHED 0 0 0 0 1RWW 16274992 Crystal structure of human caspase-1 in complex with 4-oxo-3-[(6-{[4-(quinoxalin-2-ylamino)-benzoylamino]-methyl}-pyridine-3-carbonyl)-amino]-butyric acid 2003-12-17 2004-12-28 Fahr, B.T.,O'Brien, T.,Pham, P.,Waal, N.D.,Baskaran, S.,Raimundo, B.C.,Lam, J.W.,Sopko, M.M.,Purkey, H.E.,Romanowski, M.J. Tethering identifies fragment that yields potent inhibitors of human caspase-1. Bioorg.Med.Chem.Lett. 2006 16 559 562 1XMF 15610020 Structure of Mn(II)-Soaked Apo Methane Monooxygenase Hydroxylase Crystals from M. capsulatus (Bath) 2004-10-02 2005-01-18 Sazinsky, M.H.,Merkx, M.,Cadieux, E.,Tang, S.,Lippard, S.J. Preparation and X-ray Structures of Metal-Free, Dicobalt and Dimanganese Forms of Soluble Methane Monooxygenase Hydroxylase from Methylococcus capsulatus (Bath) Biochemistry 2004 43 16263 16276 1XMH 15610020 Structure of Co(II) reconstituted methane monooxygenase hydroxylase from M. capsulatus (Bath) 2004-10-02 2005-01-18 Sazinsky, M.H.,Merkx, M.,Cadieux, E.,Tang, S.,Lippard, S.J. Preparation and X-ray Structures of Metal-Free, Dicobalt and Dimanganese Forms of Soluble Methane Monooxygenase Hydroxylase from Methylococcus capsulatus (Bath) Biochemistry 2004 43 16263 16276 1YAE 15677325 Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid 2004-12-17 2005-02-01 Nanao, M.H.,Green, T.,Stern-Bach, Y.,Heinemann, S.F.,Choe, S. Structure of the kainate receptor subunit GluR6 agonist-binding domain complexed with domoic acid. Proc.Natl.Acad.Sci.USA 2005 102 1708 1713 1XA9 15628861 Crystal structure of yellow fluorescent protein zFP538 K66M green mutant 2004-08-25 2005-02-08 Remington, S.J.,Wachter, R.M.,Yarbrough, D.K.,Branchaud, B.,Anderson, D.C.,Kallio, K.,Lukyanov, K.A. zFP538, a yellow-fluorescent protein from Zoanthus, contains a novel three-ring chromophore. Biochemistry 2005 44 202 212 1WWJ 15716274 crystal structure of KaiB from Synechocystis sp. 2005-01-06 2005-02-15 Hitomi, K.,Oyama, T.,Han, S.,Arvai, A.S.,Getzoff, E.D. Tetrameric architecture of the circadian clock protein KaiB. A novel interface for intermolecular interactions and its impact on the circadian rhythm. J.Biol.Chem. 2005 280 19127 19135 1R5M 16051270 Crystal Structure Of The C-Terminal WD40 Domain Of Sif2 2003-10-10 2005-03-01 Cerna, D.,Wilson, D.K. The structure of Sif2p, a WD repeat protein functioning in the SET3 corepressor complex. J.Mol.Biol. 2005 351 923 935 1SOV Toxoplasma gondii bradyzoite-specific LDH (LDH2) apo form 2004-03-15 2005-03-15 Kavanagh, K.L.,Wilson, D.K. Structure of apo and ternary forms of Toxoplasma gondii LDH2 To be Published 0 0 0 0 1SOW T. gondii bradyzoite-specific LDH (LDH2) in complex with NAD and oxalate 2004-03-15 2005-03-15 Kavanagh, K.L.,Wilson, D.K. Structure of apo and ternary forms of Toxoplasma gondii LDH2 To be Published 0 0 0 0 1QVN 17032757 Structure of SP4160 Bound to IL-2 V69A 2003-08-28 2005-04-05 Thanos, C.D.,DeLano, W.L.,Wells, J.A. Hot-spot mimicry of a cytokine receptor by a small molecule. Proc.Natl.Acad.Sci.USA 2006 103 15422 15427 1U0O 15665869 The mouse von Willebrand Factor A1-botrocetin complex 2004-07-14 2005-04-19 Fukuda, K.,Doggett, T.,Laurenzi, I.J.,Liddington, R.C.,Diacovo, T.G. The snake venom protein botrocetin acts as a biological brace to promote dysfunctional platelet aggregation Nat.Struct.Mol.Biol. 2005 12 152 159 1XVG 15839679 soluble methane monooxygenase hydroxylase: bromoethanol soaked structure 2004-10-27 2005-05-03 Sazinsky, M.H.,Lippard, S.J. Product Bound Structures of the Soluble Methane Monooxygenase Hydroxylase from Methylococcus capsulatus (Bath): Protein Motion in the Alpha-Subunit J.Am.Chem.Soc. 2005 127 5814 5825 1YA9 15890642 Crystal Structure of the 22kDa N-Terminal Fragment of Mouse Apolipoprotein E 2004-12-17 2005-06-07 Hatters, D.M.,Peters-Libeu, C.A.,Weisgraber, K.H. Engineering conformational destabilization into mouse apolipoprotein E. A model for a unique property of human apolipoprotein E4 J.Biol.Chem. 2005 280 26477 26482 1ZRT 16034531 Rhodobacter capsulatus cytochrome bc1 complex with stigmatellin bound 2005-05-22 2005-06-07 Berry, E.A.,Huang, L.S.,Saechao, L.K.,Pon, N.G.,Valkova-Valchanova, M.,Daldal, F. X-Ray Structure of Rhodobacter Capsulatus Cytochrome bc (1): Comparison with its Mitochondrial and Chloroplast Counterparts. Photosynth.Res. 2004 81 251 275 1ZG7 15982000 Crystal Structure of 2-(5-{[amino(imino)methyl]amino}-2-chlorophenyl)-3-sulfanylpropanoic acid Bound to Activated Porcine Pancreatic Carboxypeptidase B 2005-04-20 2005-07-12 Adler, M.,Bryant, J.,Buckman, B.,Islam, I.,Larsen, B.,Finster, S.,Kent, L.,May, K.,Mohan, R.,Yuan, S.,Whitlow, M. Crystal structures of potent thiol-based inhibitors bound to carboxypeptidase b. Biochemistry 2005 44 9339 9347 1ZG8 15982000 Crystal Structure of (R)-2-(3-{[amino(imino)methyl]amino}phenyl)-3-sulfanylpropanoic acid Bound to Activated Porcine Pancreatic Carboxypeptidase B 2005-04-20 2005-07-12 Adler, M.,Bryant, J.,Buckman, B.,Islam, I.,Larsen, B.,Finster, S.,Kent, L.,May, K.,Mohan, R.,Yuan, S.,Whitlow, M. Crystal structures of potent thiol-based inhibitors bound to carboxypeptidase b. Biochemistry 2005 44 9339 9347 1ZG9 15982000 Crystal Structure of 5-{[amino(imino)methyl]amino}-2-(sulfanylmethyl)pentanoic acid Bound to Activated Porcine Pancreatic Carboxypeptidase B 2005-04-20 2005-07-12 Adler, M.,Bryant, J.,Buckman, B.,Islam, I.,Larsen, B.,Finster, S.,Kent, L.,May, K.,Mohan, R.,Yuan, S.,Whitlow, M. Crystal structures of potent thiol-based inhibitors bound to carboxypeptidase b. Biochemistry 2005 44 9339 9347 1ZHN 16002697 Crystal Structure of mouse CD1d bound to the self ligand phosphatidylcholine 2005-04-26 2005-07-19 Giabbai, B.,Sidobre, S.,Crispin, M.M.D.,Sanchez Ruiz, Y.,Bachi, A.,Kronenberg, M.,Wilson, I.A.,Degano, M. Crystal structure of mouse CD1d bound to the self ligand phosphatidylcholine: a molecular basis for NKT cell activation J.Immunol. 2005 175 977 984 1U17 1.7 A Crystal structure of H60C mutant of Nitrophorin I. Heme complexed with two molecules imidazole 2004-07-14 2005-07-26 Vetter, S.W.,Goodin, D.B. 1.7 A Crystal structure of H60C mutant of Nitrophorin I. Heme complexed with two molecules imidazole TO BE PUBLISHED 0 0 0 0 1XBS 16142897 Crystal structure of human dim2: a dim1-like protein 2004-08-31 2005-08-30 Simeoni, F.,Arvai, A.,Bello, P.,Gondeau, C.,Hopfner, K.-P.,Neyroz, P.,Heitz, F.,Tainer, J.,Divita, G. Biochemical Characterization and Crystal Structure of a Dim1 Family Associated Protein: Dim2 Biochemistry 2005 44 11997 12008 1XLQ 15755454 Crystal structure of reduced C73S putidaredoxin from Pseudomonas putida 2004-09-30 2005-10-04 Sevrioukova, I.F. Redox-dependent Structural Reorganization in Putidaredoxin, a Vertebrate-type [2Fe-2S] Ferredoxin from Pseudomonas putida. J.Mol.Biol. 2005 347 607 621 2AD5 16216072 Mechanisms of feedback regulation and drug resistance of CTP synthetases: structure of the E. coli CTPS/CTP complex at 2.8-Angstrom resolution. 2005-07-19 2005-11-01 Endrizzi, J.A.,Kim, H.,Anderson, P.M.,Baldwin, E.P. Mechanisms of Product Feedback Regulation and Drug Resistance in Cytidine Triphosphate Synthetases from the Structure of a CTP-Inhibited Complex(,). Biochemistry 2005 44 13491 13499 2EWE 10368179 Crystal structure of Pectate Lyase C R218K mutant in complex with pentagalacturonic acid 2005-11-02 2005-11-15 Scavetta, R.D.,Herron, S.R.,Hotchkiss, A.T.,Kita, N.,Keen, N.T.,Benen, J.A.,Kester, H.C.,Visser, J.,Jurnak, F. Structure of a Plant Cell Wall Fragment Complexed to Pectate Lyase C Plant Cell 1999 11 1081 1092 2AZ5 16284179 Crystal Structure of TNF-alpha with a small molecule inhibitor 2005-09-09 2005-11-29 He, M.M.,Smith, A.S.,Oslob, J.D.,Flanagan, W.M.,Braisted, A.C.,Whitty, A.,Cancilla, M.T.,Wang, J.,Lugovskoy, A.A.,Yoburn, J.C.,Fung, A.D.,Farrington, G.,Eldredge, J.K.,Day, E.S.,Cruz, L.A.,Cachero, T.G.,Miller, S.K.,Friedman, J.E.,Choong, I.C.,Cunningham, B.C. Small-molecule inhibition of TNF-alpha. Science 2005 310 1022 1025 1W6C 17077478 AGAO holoenzyme in a small cell, at 2.2 angstroms 2004-08-17 2005-12-08 Langley, D.B.,Duff, A.P.,Freeman, H.C.,Guss, J.M. The Copper Containing Amine Oxidase from Arthrobacter Globiformis: Refinement at 1.55 And 2.20 A Resolution in Two Crystal Forms. Acta Crystallogr.,Sect.F 2006 62 1052 0 1W6G 17077478 AGAO holoenzyme at 1.55 angstroms 2004-08-18 2005-12-08 Langley, D.B.,Duff, A.P.,Freeman, H.C.,Guss, J.M. The Copper Containing Amine Oxidase from Arthrobacter Globiformis: Refinement at 1.55 And 2.20 A Resolution in Two Crystal Forms. Acta Crystallogr.,Sect.F 2006 62 1052 0 2B5A 16338412 C.BclI, Control Element of the BclI Restriction-Modification System 2005-09-28 2006-01-03 Sawaya, M.R.,Zhu, Z.,Mersha, F.,Chan, S.H.,Dabur, R.,Xu, S.Y.,Balendiran, G.K. Crystal Structure of the Restriction-Modification System Control Element C.BclI and Mapping of Its Binding Site. Structure 2005 13 1837 1847 2FWQ 16522096 Reduced enolate chromophore intermediate for Y66H GFP variant 2006-02-02 2006-03-14 Barondeau, D.P.,Tainer, J.A.,Getzoff, E.D. Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis. J.Am.Chem.Soc. 2006 128 3166 3168 2FZU 16522096 Reduced enolate chromophore intermediate for GFP variant 2006-02-10 2006-03-14 Barondeau, D.P.,Tainer, J.A.,Getzoff, E.D. Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis. J.Am.Chem.Soc. 2006 128 3166 3168 2G8X Escherichia coli Y209W apoprotein 2006-03-03 2006-03-14 Newby, Z.,Lee, T.T.,Morse, R.J.,Liu, L.,Liu, Y.,Venkatraman, P.,Santi, D.V.,Finer-Moore, J.S.,Stroud, R.M. The role of protein dynamics in thymidylate synthase catalysis: Variants of conserved dUMP-binding Tyr-261 TO BE PUBLISHED 0 0 0 0 2AWJ 16331981 GFP R96M pre-cyclized intermediate in chromophore formation 2005-09-01 2006-04-18 Wood, T.I.,Barondeau, D.P.,Hitomi, C.,Kassmann, C.J.,Tainer, J.A.,Getzoff, E.D. Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis. Biochemistry 2005 44 16211 16220 2G6O 16804678 Structure of bovine eNOS heme domain (BH4-free) complexed with CO 2006-02-24 2006-08-08 Li, H.,Igarashi, J.,Jamal, J.,Yang, W.,Poulos, T.L. Structural studies of constitutive nitric oxide synthases with diatomic ligands bound. J.Biol.Inorg.Chem. 2006 11 753 768 2HI2 16949362 Crystal structure of native Neisseria gonorrhoeae Type IV pilin at 2.3 Angstroms Resolution 2006-06-28 2006-09-12 Craig, L.,Volkmann, N.,Arvai, A.S.,Pique, M.E.,Yeager, M.,Egelman, E.H.,Tainer, J.A. Type IV Pilus Structure by Cryo-Electron Microscopy and Crystallography: Implications for Pilus Assembly and Functions. Mol.Cell 2006 23 651 662 2AQN CU/ZN superoxide dismutase from neisseria meningitidis 2005-08-18 2006-10-31 DiDonato, M.,Kassmann, C.J.,Bruns, C.K.,Cabelli, D.E.,Cao, Z.,Tabatabai, L.B.,Kroll, J.S.,Getzoff, E.D. CU/ZN superoxide dismutase from neisseria meningitidis To be Published 0 0 0 0 2AQP CU/ZN superoxide dismutase from neisseria meningitidis E73A mutant 2005-08-18 2006-10-31 DiDonato, M.,Kassmann, C.J.,Bruns, C.K.,Cabelli, D.E.,Cao, Z.,Tabatabai, L.B.,Kroll, J.S.,Getzoff, E.D. CU/ZN superoxide dismutase from neisseria meningitidis E73A mutant To be Published 0 0 0 0 2IST crystal structure of RluD from E. coli 2006-10-18 2006-10-31 Foster, P.G.,Finer-Moore, J.S.,Stroud, R.M. Crystal structure of RluD from E. coli TO BE PUBLISHED 0 0 0 0 2IST crystal structure of RluD from E. coli 2006-10-18 2006-10-31 Foster, P.G.,Finer-Moore, J.S.,Stroud, R.M. Crystal structure of RluD from E. coli TO BE PUBLISHED 0 0 0 0 2HKI 17077485 Crystal structure of photosynthetic glyceraldehyde-3-phosphate dehydrogenase A4 isoform 2006-07-04 2006-11-14 Camara-Artigas, A.,Hirasawa, M.,Knaff, D.B.,Wang, M.,Allen, J.P. Crystallization and structural analysis of GADPH from Spinacia oleracea in a new form. Acta Crystallogr.,Sect.F 2006 62 1087 1092 2GQQ 17223133 Crystal Structure of E. coli Leucine-responsive regulatory protein (Lrp) 2006-04-21 2007-03-06 de Los Rios, S.,Perona, J.J. Structure of the Escherichia coli Leucine-responsive Regulatory Protein Lrp Reveals a Novel Octameric Assembly. J.Mol.Biol. 2007 366 1589 1602 2ORP 17315988 Murine inducible nitric oxide synthase oxygenase domain (delta 114) 2-[4-(2-Imidazol-1-yl-6-methyl-pyrimidin-4-yl)-1-isobutyryl-piperazin-2-yl]-N-[2-(4-methoxy-phenyl)-ethyl]-acetamide complex 2007-02-04 2007-04-10 Davey, D.D.,Adler, M.,Arnaiz, D.,Eagen, K.,Erickson, S.,Guilford, W.,Kenrick, M.,Morrissey, M.M.,Ohlmeyer, M.,Pan, G.,Paradkar, V.M.,Parkinson, J.,Polokoff, M.,Saionz, K.,Santos, C.,Subramanyam, B.,Vergona, R.,Wei, R.G.,Whitlow, M.,Ye, B.,Zhao, Z.S.,Devlin, J.J.,Phillips, G. Design, Synthesis, and Activity of 2-Imidazol-1-ylpyrimidine Derived Inducible Nitric Oxide Synthase Dimerization Inhibitors J.Med.Chem. 2007 50 1146 1157 2Q9C 17622352 Structure of FTSY:GMPPNP with MGCL Complex 2007-06-12 2007-07-03 Reyes, C.L.,Rutenber, E.,Walter, P.,Stroud, R.M. X-ray Structures of the Signal Recognition Particle Receptor Reveal Targeting Cycle Intermediates. Plos One 2007 2 0 0 2OMB 17582169 Bence Jones KWR Protein- Immunoglobulin Light Chain Dimer, P3(1)21 Crystal Form 2007-01-21 2007-07-17 Makino, D.L.,Henschen-Edman, A.H.,Larson, S.B.,McPherson, A. Bence Jones KWR protein structures determined by X-ray crystallography. Acta Crystallogr.,Sect.D 2007 63 780 792 2P3U Crystal structure of human factor XA complexed with 3-chloro-N-(4-chloro-2-{[(5-chloropyridin-2-yl)amino]carbonyl}-6-methoxyphenyl)-4-[(1-methyl-1H-imidazol-2-yl)methyl]thiophene-2-carboxamide {Pfizer 320663} 2007-03-09 2007-09-11 0 0 0 0 2PI2 17976647 Full-length Replication protein A subunits RPA14 and RPA32 2007-04-12 2007-10-16 Deng, X.,Habel, J.E.,Kabaleeswaran, V.,Snell, E.H.,Wold, M.S.,Borgstahl, G.E. Structure of the Full-length Human RPA14/32 Complex Gives Insights into the Mechanism of DNA Binding and Complex Formation. J.Mol.Biol. 2007 374 865 876 2Q33 Crystal structure of all-D monellin at 1.8 A resolution 2007-05-29 2007-11-13 Hung, L.-W.,Kohmura, M.,Ariyoshi, Y.,Kim, S.-H. Structure of an Enantiomeric Protein, D-Monellin at 1.8 A Resolution. Acta Crystallogr.,Sect.D 1998 54 494 500 2E86 18358002 Azide bound to copper containing nitrite reductase from A. faecalis S-6 2007-01-19 2008-01-22 Tocheva, E.I.,Eltis, L.D.,Murphy, M.E.P. Conserved Active Site Residues Limit Inhibition of a Copper-Containing Nitrite Reductase by Small Molecules. Biochemistry 2008 47 4452 4460 2PIZ 18219114 CRYSTAL STRUCTURE OF ACTIVATED PORCINE PANCREATIC CARBOXYPEPTIDASE B 2-(3-Guanidino-phenyl)-3-[hydroxy-(3-phenyl-propyl)-phosphinoyl]-propionic acid COMPLEX 2007-04-15 2008-01-22 Adler, M.,Buckman, B.,Bryant, J.,Chang, Z.,Chu, K.,Emayan, K.,Hrvatin, P.,Islam, I.,Morser, J.,Sukovich, D.,West, C.,Yuan, S.,Whitlow, M. Structures of potent selective peptide mimetics bound to carboxypeptidase B. Acta Crystallogr.,Sect.D 2008 64 149 157 2PJ0 18219114 CRYSTAL STRUCTURE OF ACTIVATED PORCINE PANCREATIC CARBOXYPEPTIDASE B [((R)-1-Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-phosphinoyloxy]-(3-guanidino-phenyl)-acetic acid COMPLEX 2007-04-15 2008-01-22 Adler, M.,Buckman, B.,Bryant, J.,Chang, Z.,Chu, K.,Emayan, K.,Hrvatin, P.,Islam, I.,Morser, J.,Sukovich, D.,West, C.,Yuan, S.,Whitlow, M. Structures of potent selective peptide mimetics bound to carboxypeptidase B. Acta Crystallogr.,Sect.D 2008 64 149 157 2PJ5 18219114 CRYSTAL STRUCTURE OF ACTIVATED PORCINE PANCREATIC CARBOXYPEPTIDASE B [((R)-1-Benzyloxycarbonylamino-hexyl)-hydroxy-phosphinoyloxy]-(3-guanidino-phenyl)-acetic acid COMPLEX 2007-04-15 2008-01-22 Adler, M.,Buckman, B.,Bryant, J.,Chang, Z.,Chu, K.,Emayan, K.,Hrvatin, P.,Islam, I.,Morser, J.,Sukovich, D.,West, C.,Yuan, S.,Whitlow, M. Structures of potent selective peptide mimetics bound to carboxypeptidase B. Acta Crystallogr.,Sect.D 2008 64 149 157 2PJA 18219114 CRYSTAL STRUCTURE OF ACTIVATED PORCINE PANCREATIC CARBOXYPEPTIDASE B 3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-3-phenyl-propionylamino)-2-methyl-propyl]-hydroxy-phosphinoyl}-2-(3-guanidino-phenyl)-propionic acid COMPLEX 2007-04-15 2008-01-22 Adler, M.,Buckman, B.,Bryant, J.,Chang, Z.,Chu, K.,Emayan, K.,Hrvatin, P.,Islam, I.,Morser, J.,Sukovich, D.,West, C.,Yuan, S.,Whitlow, M. Structures of potent selective peptide mimetics bound to carboxypeptidase B. Acta Crystallogr.,Sect.D 2008 64 149 157 2PJC 18219114 CRYSTAL STRUCTURE OF ACTIVATED PORCINE PANCREATIC CARBOXYPEPTIDASE B ({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-(4-hydroxy-phenyl)-propionylamino]-2-methyl-propyl}-hydroxy-phosphinoyloxy)-(3-guanidino-phenyl)-acetic acid COMPLEX 2007-04-15 2008-01-22 Adler, M.,Buckman, B.,Bryant, J.,Chang, Z.,Chu, K.,Emayan, K.,Hrvatin, P.,Islam, I.,Morser, J.,Sukovich, D.,West, C.,Yuan, S.,Whitlow, M. Structures of potent selective peptide mimetics bound to carboxypeptidase B. Acta Crystallogr.,Sect.D 2008 64 149 157 3BUE 18703843 Crystal structure of the C-terminal domain hexamer of ArgR from Mycobacterium tuberculosis 2008-01-02 2008-01-22 Cherney, L.T.,Cherney, M.M.,Garen, C.R.,Lu, G.J.,James, M.N. Structure of the C-terminal domain of the arginine repressor protein from Mycobacterium tuberculosis. Acta Crystallogr.,Sect.D 2008 64 950 956 3BBP 18243103 Rab6-GTP:GCC185 Rab binding domain complex 2007-11-09 2008-02-05 Burguete, A.S.,Fenn, T.D.,Brunger, A.T.,Pfeffer, S.R. Rab and Arl GTPase family members cooperate in the localization of the golgin GCC185. Cell(Cambridge,Mass.) 2008 132 286 298 2ZFZ 18703843 Crystal structure of the C-terminal domain hexamer of ArgR from Mycobacterium tuberculosis in complex with arginine 2008-01-16 2008-02-12 Cherney, L.T.,Cherney, M.M.,Garen, C.R.,Lu, G.J.,James, M.N. Structure of the C-terminal domain of the arginine repressor protein from Mycobacterium tuberculosis. Acta Crystallogr.,Sect.D 2008 64 950 956 2HRS Crystal structure of L42H V224H design intermediate for GFP metal ion reporter 2006-07-20 2008-04-08 Barondeau, D.P.,Tubbs, J.L.,Tainer, J.A.,Getzoff, E.D. Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter To be Published 0 0 0 0 3C05 18391413 Crystal structure of Acostatin from Agkistrodon Contortrix Contortrix 2008-01-18 2008-04-29 Moiseeva, N.,Bau, R.,Swenson, S.D.,Markland, F.S.,Choe, J.-Y.,Liu, Z.-J.,Allaire, M. Crystal structure of acostatin, a dimeric disintegrin from southern copperhead (Agkistrodon contortrix contortrix) at 1.7 A resolution Acta Crystallogr.,Sect.D 2008 64 466 470 3C3O 18511562 ALIX Bro1-domain:CHMIP4A co-crystal structure 2008-01-28 2008-06-10 McCullough, J.,Fisher, R.D.,Whitby, F.G.,Sundquist, W.I.,Hill, C.P. ALIX-CHMP4 interactions in the human ESCRT pathway. Proc.Natl.Acad.Sci.Usa 2008 105 7687 7691 3DAJ 18579375 Crystal structure of Aurora A complexed with an inhibitor discovered through site-directed dynamic tethering 2008-05-29 2008-07-08 Cancilla, M.T.,He, M.M.,Viswanathan, N.,Simmons, R.L.,Taylor, M.,Fung, A.D.,Cao, K.,Erlanson, D.A. Discovery of an Aurora kinase inhibitor through site-specific dynamic combinatorial chemistry. Bioorg.Med.Chem.Lett. 2008 18 3978 3981 3DPI Crystal Structure of NAD+ synthetase from Burkholderia Pseudomallei 2008-07-08 2008-07-29 Seattle Structural Genomics Center for Infectious Disease (SSGCID) Crystal Structure of NAD+ synthetase from Burkholderia Pseudomallei To be Published 0 0 0 0 2ZDP 18713745 Crystal structure of IsdI in complex with Cobalt protoporphyrin IX 2007-11-27 2008-08-19 Lee, W.C.,Reniere, M.L.,Skaar, E.P.,Murphy, M.E.P. Ruffling of Metalloporphyrins Bound to IsdG and IsdI, Two Heme-degrading Enzymes in Staphylococcus aureus J.Biol.Chem. 2008 283 30957 30963 3DPG 18701646 SgrAI with noncognate DNA bound 2008-07-08 2008-08-19 Dunten, P.W.,Little, E.J.,Gregory, M.T.,Manohar, V.M.,Dalton, M.,Hough, D.,Bitinaite, J.,Horton, N.C. The structure of SgrAI bound to DNA; recognition of an 8 base pair target. Nucleic Acids Res. 2008 36 5405 5416 3B70 22733743 Crystal structure of Aspergillus terreus trans-acting lovastatin polyketide enoyl reductase (LovC) with bound NADP 2007-10-29 2008-09-16 Ames, B.D.,Nguyen, C.,Bruegger, J.,Smith, P.,Xu, W.,Ma, S.,Wong, E.,Wong, S.,Xie, X.,Li, J.W.,Vederas, J.C.,Tang, Y.,Tsai, S.C. Crystal structure and biochemical studies of the trans-acting polyketide enoyl reductase LovC from lovastatin biosynthesis. Proc.Natl.Acad.Sci.USA 2012 109 11144 11149 3DVG 18724939 Crystal structure of K63-specific fab Apu.3A8 bound to K63-linked di-ubiquitin 2008-07-18 2008-09-30 Newton, K.,Matsumoto, M.L.,Wertz, I.E.,Kirkpatrick, D.S.,Lill, J.R.,Tan, J.,Dugger, D.,Gordon, N.,Sidhu, S.S.,Fellouse, F.A.,Komuves, L.,French, D.M.,Ferrando, R.E.,Lam, C.,Compaan, D.,Yu, C.,Bosanac, I.,Hymowitz, S.G.,Kelley, R.F.,Dixit, V.M. Ubiquitin chain editing revealed by polyubiquitin linkage-specific antibodies. Cell(Cambridge,Mass.) 2008 134 668 678 3E68 18849972 Structure of murine INOS oxygenase domain with inhibitor AR-C130232 2008-08-14 2008-10-07 Garcin, E.D.,Arvai, A.S.,Rosenfeld, R.J.,Kroeger, M.D.,Crane, B.R.,Andersson, G.,Andrews, G.,Hamley, P.J.,Mallinder, P.R.,Nicholls, D.J.,St-Gallay, S.A.,Tinker, A.C.,Gensmantel, N.P.,Mete, A.,Cheshire, D.R.,Connolly, S.,Stuehr, D.J.,Aberg, A.,Wallace, A.V.,Tainer, J.A.,Getzoff, E.D. Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase. Nat.Chem.Biol. 2008 4 700 707 3E6L 18849972 Structure of murine INOS oxygenase domain with inhibitor AR-C132283 2008-08-15 2008-10-07 Garcin, E.D.,Arvai, A.S.,Rosenfeld, R.J.,Kroeger, M.D.,Crane, B.R.,Andersson, G.,Andrews, G.,Hamley, P.J.,Mallinder, P.R.,Nicholls, D.J.,St-Gallay, S.A.,Tinker, A.C.,Gensmantel, N.P.,Mete, A.,Cheshire, D.R.,Connolly, S.,Stuehr, D.J.,Aberg, A.,Wallace, A.V.,Tainer, J.A.,Getzoff, E.D. Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase. Nat.Chem.Biol. 2008 4 700 707 3E6O 18849972 Structure of murine INOS oxygenase domain with inhibitor AR-C124355 2008-08-15 2008-10-07 Garcin, E.D.,Arvai, A.S.,Rosenfeld, R.J.,Kroeger, M.D.,Crane, B.R.,Andersson, G.,Andrews, G.,Hamley, P.J.,Mallinder, P.R.,Nicholls, D.J.,St-Gallay, S.A.,Tinker, A.C.,Gensmantel, N.P.,Mete, A.,Cheshire, D.R.,Connolly, S.,Stuehr, D.J.,Aberg, A.,Wallace, A.V.,Tainer, J.A.,Getzoff, E.D. Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase. Nat.Chem.Biol. 2008 4 700 707 3E6T 18849972 Structure of murine INOS oxygenase domain with inhibitor AR-C118901 2008-08-15 2008-10-07 Garcin, E.D.,Arvai, A.S.,Rosenfeld, R.J.,Kroeger, M.D.,Crane, B.R.,Andersson, G.,Andrews, G.,Hamley, P.J.,Mallinder, P.R.,Nicholls, D.J.,St-Gallay, S.A.,Tinker, A.C.,Gensmantel, N.P.,Mete, A.,Cheshire, D.R.,Connolly, S.,Stuehr, D.J.,Aberg, A.,Wallace, A.V.,Tainer, J.A.,Getzoff, E.D. Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase. Nat.Chem.Biol. 2008 4 700 707 3E7M 18849972 Structure of murine iNOS oxygenase domain with inhibitor AR-C95791 2008-08-18 2008-10-07 Garcin, E.D.,Arvai, A.S.,Rosenfeld, R.J.,Kroeger, M.D.,Crane, B.R.,Andersson, G.,Andrews, G.,Hamley, P.J.,Mallinder, P.R.,Nicholls, D.J.,St-Gallay, S.A.,Tinker, A.C.,Gensmantel, N.P.,Mete, A.,Cheshire, D.R.,Connolly, S.,Stuehr, D.J.,Aberg, A.,Wallace, A.V.,Tainer, J.A.,Getzoff, E.D. Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase. Nat.Chem.Biol. 2008 4 700 707 3E7S 18849972 Structure of bovine eNOS oxygenase domain with inhibitor AR-C95791 2008-08-18 2008-10-07 Garcin, E.D.,Arvai, A.S.,Rosenfeld, R.J.,Kroeger, M.D.,Crane, B.R.,Andersson, G.,Andrews, G.,Hamley, P.J.,Mallinder, P.R.,Nicholls, D.J.,St-Gallay, S.A.,Tinker, A.C.,Gensmantel, N.P.,Mete, A.,Cheshire, D.R.,Connolly, S.,Stuehr, D.J.,Aberg, A.,Wallace, A.V.,Tainer, J.A.,Getzoff, E.D. Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase. Nat.Chem.Biol. 2008 4 700 707 3E7T 18849972 Structure of murine iNOS oxygenase domain with inhibitor AR-C102222 2008-08-18 2008-10-07 Garcin, E.D.,Arvai, A.S.,Rosenfeld, R.J.,Kroeger, M.D.,Crane, B.R.,Andersson, G.,Andrews, G.,Hamley, P.J.,Mallinder, P.R.,Nicholls, D.J.,St-Gallay, S.A.,Tinker, A.C.,Gensmantel, N.P.,Mete, A.,Cheshire, D.R.,Connolly, S.,Stuehr, D.J.,Aberg, A.,Wallace, A.V.,Tainer, J.A.,Getzoff, E.D. Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase. Nat.Chem.Biol. 2008 4 700 707 3EIB 18952095 Crystal structure of K270N variant of LL-diaminopimelate aminotransferase from Arabidopsis thaliana 2008-09-15 2008-10-14 Watanabe, N.,Clay, M.D.,van Belkum, M.J.,Cherney, M.M.,Vederas, J.C.,James, M.N. Mechanism of substrate recognition and PLP-induced conformational changes in LL-diaminopimelate aminotransferase from Arabidopsis thaliana. J.Mol.Biol. 2008 384 1314 1329 3DYM 19472413 E. coli (lacZ) beta-galactosidase (H418E) 2008-07-28 2008-10-28 Juers, D.H.,Rob, B.,Dugdale, M.L.,Rahimzadeh, N.,Giang, C.,Lee, M.,Matthews, B.W.,Huber, R.E. Direct and indirect roles of His-418 in metal binding and in the activity of beta-galactosidase (E. coli). Protein Sci. 2009 18 1281 1292 3DYO 19472413 E. coli (lacZ) beta-galactosidase (H418N) in complex with IPTG 2008-07-28 2008-10-28 Juers, D.H.,Rob, B.,Dugdale, M.L.,Rahimzadeh, N.,Giang, C.,Lee, M.,Matthews, B.W.,Huber, R.E. Direct and indirect roles of His-418 in metal binding and in the activity of beta-galactosidase (E. coli). Protein Sci. 2009 18 1281 1292 3DYP 19472413 E. coli (lacZ) beta-galactosidase (H418N) 2008-07-28 2008-10-28 Juers, D.H.,Rob, B.,Dugdale, M.L.,Rahimzadeh, N.,Giang, C.,Lee, M.,Matthews, B.W.,Huber, R.E. Direct and indirect roles of His-418 in metal binding and in the activity of beta-galactosidase (E. coli). Protein Sci. 2009 18 1281 1292 3BDF Crystal structure of metal-free E. coli alkaline phosphatase (T155V) 2007-11-14 2008-11-25 Grigg, J.C.,Hucaluk, C.,Murphy, M.E.,Ritter, H.,Yee, J.,Rafferty, S. The Active-Site Trimetallic Cluster of Alkaline Phosphatase is Lost Upon Isosteric Mutation at the Mg2+-Coordinating Residue Threonine-155 To be Published 0 0 0 0 3E6R 19037243 Crystal structure of apo-ferritin from Pseudo-nitzschia multiseries 2008-08-15 2008-11-25 Marchetti, A.,Parker, M.S.,Moccia, L.P.,Lin, E.O.,Arrieta, A.L.,Ribalet, F.,Murphy, M.E.,Maldonado, M.T.,Armbrust, E.V. Ferritin is used for iron storage in bloom-forming marine pennate diatoms. Nature 2009 457 467 470 3ERS 11101501 Crystal Structure of E. coli Trbp111 2008-10-03 2008-12-02 Swairjo, M.A.,Morales, A.J.,Wang, C.-C.,Ortiz, A.R.,Schimmel, P. Crystal structure of Trbp111: a tructure specific tRNA binding protein Embo J. 2000 19 6287 6298 2ZJL Crystal structure of the human BACE1 catalytic domain in complex with N-[1-(5-bromo-2,3-dimethoxy-benzyl)-piperidin-4-yl]-4-mercapto-butyramide 2008-03-07 2009-01-20 Yang, W.,Fucini, R.V.,Fahr, B.T.,Randal, M.,Lind, K.E.,Lam, M.B.,Lu, W.,Lu, Y.,Cary, D.R.,Romanowski, M.J. Fragment-based discovery of novel BACE1 inhibitors using Tethering technology To be Published 0 0 0 0 3BWK 19620707 Crystal Structure of Falcipain-3 with Its inhibitor, K11017 2008-01-09 2009-01-20 Kerr, I.D.,Lee, J.H.,Farady, C.J.,Marion, R.,Rickert, M.,Sajid, M.,Pandey, K.C.,Caffrey, C.R.,Legac, J.,Hansell, E.,McKerrow, J.H.,Craik, C.S.,Rosenthal, P.J.,Brinen, L.S. Vinyl sulfones as antiparasitic agents and a structural basis for drug design. J.Biol.Chem. 2009 284 25697 25703 3ENJ 19407370 Structure of Pig Heart Citrate Synthase at 1.78 A resolution 2008-09-25 2009-02-03 Larson, S.B.,Day, J.S.,Nguyen, C.,Cudney, R.,McPherson, A. Structure of pig heart citrate synthase at 1.78 A resolution. Acta Crystallogr.,Sect.F 2009 65 430 434 3CDO 19384988 Bacteriophage T4 lysozyme mutant R96V in wildtype background at low temperature 2008-02-27 2009-02-17 Mooers, B.H.,Baase, W.A.,Wray, J.W.,Matthews, B.W. Contributions of all 20 amino acids at site 96 to the stability and structure of T4 lysozyme. Protein Sci. 2009 18 871 880 3GCA 19261617 The structural basis for recognition of the preQ0 metabolite by an unusually small riboswitch aptamer domain 2009-02-21 2009-03-03 Spitale, R.C.,Torelli, A.T.,Krucinska, J.,Bandarian, V.,Wedekind, J.E. The Structural Basis for Recognition of the PreQ0 Metabolite by an Unusually Small Riboswitch Aptamer Domain. J.Biol.Chem. 2009 284 11012 11016 3F7G 19228017 Structure of the BIR domain from ML-IAP bound to a peptidomimetic 2008-11-09 2009-03-17 Cohen, F.,Alicke, B.,Elliott, L.O.,Flygare, J.A.,Goncharov, T.,Keteltas, S.F.,Franklin, M.C.,Frankovitz, S.,Stephan, J.P.,Tsui, V.,Vucic, D.,Wong, H.,Fairbrother, W.J. Orally bioavailable antagonists of inhibitor of apoptosis proteins based on an azabicyclooctane scaffold J.Med.Chem. 2009 52 1723 1730 3EUF 19291308 Crystal structure of BAU-bound human uridine phosphorylase 1 2008-10-10 2009-03-31 Roosild, T.P.,Castronovo, S.,Fabbiani, M.,Pizzorno, G. Implications of the structure of human uridine phosphorylase 1 on the development of novel inhibitors for improving the therapeutic window of fluoropyrimidine chemotherapy. Bmc Struct.Biol. 2009 9 14 14 3GQV Lovastatin polyketide enoyl reductase (LovC) mutant K54S with bound NADP 2009-03-24 2009-04-07 Ames, B.D.,Smith, P.T.,Ma, S.M.,Kaake, R.,Wong, E.W.,Xie, X.,Li, J.W.,Vederas, J.C.,Tang, Y.,Tsai, S.-C. biosynthesis of Lovastatin: Crystal structure and biochemical studies of LOVC, A trans-acting polyketide enoyl reductase To be Published 0 0 0 0 3EH3 19140675 Structure of the reduced form of cytochrome ba3 oxidase from Thermus thermophilus 2008-09-11 2009-04-21 Liu, B.,Chen, Y.,Doukov, T.,Soltis, S.M.,Stout, C.D.,Fee, J.A. Combined microspectrophotometric and crystallographic examination of chemically reduced and X-ray radiation-reduced forms of cytochrome ba3 oxidase from Thermus thermophilus: structure of the reduced form of the enzyme. Biochemistry 2009 48 820 826 3EH4 19140675 Structure of the reduced form of cytochrome ba3 oxidase from Thermus thermophilus 2008-09-11 2009-04-21 Liu, B.,Chen, Y.,Doukov, T.,Soltis, S.M.,Stout, C.D.,Fee, J.A. Combined microspectrophotometric and crystallographic examination of chemically reduced and X-ray radiation-reduced forms of cytochrome ba3 oxidase from Thermus thermophilus: structure of the reduced form of the enzyme. Biochemistry 2009 48 820 826 3EH5 19140675 Structure of the reduced form of cytochrome ba3 oxidase from Thermus thermophilus 2008-09-11 2009-04-21 Liu, B.,Chen, Y.,Doukov, T.,Soltis, S.M.,Stout, C.D.,Fee, J.A. Combined microspectrophotometric and crystallographic examination of chemically reduced and X-ray radiation-reduced forms of cytochrome ba3 oxidase from Thermus thermophilus: structure of the reduced form of the enzyme. Biochemistry 2009 48 820 826 3H1H Cytochrome bc1 complex from chicken 2009-04-12 2009-04-28 Zhang, Z.,Huang, L.,Shulmeister, V.M.,Chi, Y.I.,Kim, K.K.,Hung, L.W.,Crofts, A.R.,Berry, E.A.,Kim, S.H. Electron Transfer by Domain Movement in Cytochrome Bc1 Nature 1998 392 677 684 3H1J Stigmatellin-bound cytochrome bc1 complex from chicken 2009-04-12 2009-04-28 Zhang, Z.,Huang, L.-S.,Shulmeister, V.M.,Chi, Y.I.,Kim, K.K.,Hung, L.W.,Crofts, A.R.,Berry, E.A.,Kim, S.-H. Electron Transfer by Domain Movement in Cytochrome Bc1 Nature 1998 392 677 684 3DJ5 Crystal structure of the mouse Aurora-A catalytic domain (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with Compound 290. 2008-06-22 2009-05-05 Elling, R.A.,A Erlanson, D.,Yang, W.,Tangonan, B.T.,Hansen, S.K.,Romanowski, M.J. New fragment-based drug discovery To be Published 0 0 0 0 3DJ6 Crystal structure of the mouse Aurora-A catalytic domain (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with Compound 823. 2008-06-22 2009-05-05 Elling, R.A.,Erlanson, D.A.,Yang, W.,Tangonan, B.T.,Hansen, S.K.,Romanowski, M.J. New fragment-based drug discovery To be Published 0 0 0 0 3GRW 19381019 FGFR3 in complex with a Fab 2009-03-26 2009-05-05 Qing, J.,Du, X.,Chen, Y.,Chan, P.,Li, H.,Wu, P.,Marsters, S.,Stawicki, S.,Tien, J.,Totpal, K.,Ross, S.,Stinson, S.,Dornan, D.,French, D.,Wang, Q.R.,Stephan, J.P.,Wu, Y.,Wiesmann, C.,Ashkenazi, A. Antibody-based targeting of FGFR3 in bladder carcinoma and t(4;14)-positive multiple myeloma in mice. J.Clin.Invest. 2009 119 1216 1229 3D15 18678489 Crystal structure of mouse Aurora A (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with 1-(3-chloro-phenyl)-3-{5-[2-(thieno[3,2-d]pyrimidin-4-ylamino)- ethyl]-thiazol-2-yl}-urea [SNS-314] 2008-05-04 2009-05-12 Oslob, J.D.,Romanowski, M.J.,Allen, D.A.,Baskaran, S.,Bui, M.,Elling, R.A.,Flanagan, W.M.,Fung, A.D.,Hanan, E.J.,Harris, S.,Heumann, S.A.,Hoch, U.,Jacobs, J.W.,Lam, J.,Lawrence, C.E.,McDowell, R.S.,Nannini, M.A.,Shen, W.,Silverman, J.A.,Sopko, M.M.,Tangonan, B.T.,Teague, J.,Yoburn, J.C.,Yu, C.H.,Zhong, M.,Zimmerman, K.M.,O'Brien, T.,Lew, W. Discovery of a potent and selective aurora kinase inhibitor. Bioorg.Med.Chem.Lett. 2008 18 4880 4884 3D2O 19767425 Crystal Structure of Manganese-metallated GTP Cyclohydrolase Type IB 2008-05-08 2009-05-12 Sankaran, B.,Bonnett, S.A.,Shah, K.,Gabriel, S.,Reddy, R.,Schimmel, P.,Rodionov, D.A.,de Crecy-Lagard, V.,Helmann, J.D.,Iwata-Reuyl, D.,Swairjo, M.A. Zinc-independent folate biosynthesis: genetic, biochemical, and structural investigations reveal new metal dependence for GTP cyclohydrolase IB J.Bacteriol. 2009 191 6936 6949 3G93 19397311 Single ligand occupancy crystal structure of cytochrome P450 2B4 in complex with the inhibitor 1-biphenyl-4-methyl-1H-imidazole 2009-02-12 2009-05-12 Gay, S.C.,Sun, L.,Maekawa, K.,Halpert, J.R.,Stout, C.D. Crystal structures of cytochrome P450 2B4 in complex with the inhibitor 1-biphenyl-4-methyl-1H-imidazole: ligand-induced structural response through alpha-helical repositioning. Biochemistry 2009 48 4762 4771 3EIX 19400778 Crystal structure of selenomethionine labelled Staphylococcus aureus lipoprotein, HtsA 2008-09-17 2009-05-26 Beasley, F.C.,Vines, E.D.,Grigg, J.C.,Zheng, Q.,Liu, S.,Lajoie, G.A.,Murphy, M.E.,Heinrichs, D.E. Characterization of staphyloferrin A biosynthetic and transport mutants in Staphylococcus aureus. Mol.Microbiol. 2009 72 947 963 3D3Z Crystal structure of Actibind a T2 RNase 2008-05-13 2009-06-02 Almog, O.,Gonzalez, A. Crystal structue of Actibind a T2 RNase To be Published 0 0 0 0 3D3Z Crystal structure of Actibind a T2 RNase 2008-05-13 2009-06-02 Almog, O.,Gonzalez, A. Crystal structue of Actibind a T2 RNase To be Published 0 0 0 0 3GK1 19469484 X-ray structure of bovine SBi132,Ca(2+)-S100B 2009-03-09 2009-06-09 Charpentier, T.H.,Wilder, P.T.,Liriano, M.A.,Varney, K.M.,Zhong, S.,Coop, A.,Pozharski, E.,MacKerell, A.D.,Toth, E.A.,Weber, D.J. Small molecules bound to unique sites in the target protein binding cleft of calcium-bound S100B as characterized by nuclear magnetic resonance and X-ray crystallography. Biochemistry 2009 48 6202 6212 3GK2 19469484 X-ray structure of bovine SBi279,Ca(2+)-S100B 2009-03-09 2009-06-09 Charpentier, T.H.,Wilder, P.T.,Liriano, M.A.,Varney, K.M.,Zhong, S.,Coop, A.,Pozharski, E.,MacKerell, A.D.,Toth, E.A.,Weber, D.J. Small molecules bound to unique sites in the target protein binding cleft of calcium-bound S100B as characterized by nuclear magnetic resonance and X-ray crystallography. Biochemistry 2009 48 6202 6212 3ERC 19446524 Crystal structure of the heterodimeric vaccinia virus mRNA polyadenylate polymerase with three fragments of RNA and 3'-deoxy ATP 2008-10-01 2009-06-16 Li, C.,Li, H.,Zhou, S.,Sun, E.,Yoshizawa, J.,Poulos, T.L.,Gershon, P.D. Polymerase Translocation with Respect to Single-Stranded Nucleic Acid: Looping or Wrapping of Primer around a Poly(A) Polymerase Structure 2009 17 680 689 3GV2 19523676 X-ray Structure of Hexameric HIV-1 CA 2009-03-30 2009-06-23 Pornillos, O.,Ganser-Pornillos, B.K.,Kelly, B.N.,Hua, Y.,Whitby, F.G.,Stout, C.D.,Sundquist, W.I.,Hill, C.P.,Yeager, M. X-ray structures of the hexameric building block of the HIV capsid. Cell(Cambridge,Mass.) 2009 137 1282 1292 3H4E 19523676 X-ray Structure of Hexameric HIV-1 CA 2009-04-19 2009-06-23 Pornillos, O.,Ganser-Pornillos, B.K.,Kelly, B.N.,Hua, Y.,Whitby, F.G.,Stout, C.D.,Sundquist, W.I.,Hill, C.P.,Yeager, M. X-ray structures of the hexameric building block of the HIV capsid. Cell(Cambridge,Mass.) 2009 137 1282 1292 3EYW 19523906 Crystal structure of the C-terminal domain of E. coli KefC in complex with KefF 2008-10-22 2009-06-30 Roosild, T.P.,Castronovo, S.,Miller, S.,Li, C.,Rasmussen, T.,Bartlett, W.,Gunasekera, B.,Choe, S.,Booth, I.R. KTN (RCK) Domains Regulate K(+) Channels and Transporters by Controlling the Dimer-Hinge Conformation. Structure 2009 17 893 903 2WMF 19608744 Crystal structure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae TIGR4 (Sp4GH98) in its native form. 2009-06-30 2009-07-14 Higgins, M.A.,Whitworth, G.E.,El Warry, N.,Randriantsoa, M.,Samain, E.,Burke, R.D.,Vocadlo, D.J.,Boraston, A.B. Differential Recognition and Hydrolysis of Host Carbohydrate-Antigens by Streptococcus Pneumoniae Family 98 Glycoside Hydrolases. J.Biol.Chem. 2009 284 26161 0 2WMG 19608744 Crystal structure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae TIGR4 (Sp4GH98) in complex with the LewisY pentasaccharide blood group antigen. 2009-06-30 2009-07-14 Higgins, M.A.,Whitworth, G.E.,El Warry, N.,Randriantsoa, M.,Samain, E.,Burke, R.D.,Vocadlo, D.J.,Boraston, A.B. Differential Recognition and Hydrolysis of Host Carbohydrate-Antigens by Streptococcus Pneumoniae Family 98 Glycoside Hydrolases. J.Biol.Chem. 2009 284 26161 0 2WMI 19608744 Crystal structure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 in complex with the A-trisaccharide blood group antigen. 2009-06-30 2009-07-14 Higgins, M.A.,Whitworth, G.E.,El Warry, N.,Randriantsoa, M.,Samain, E.,Burke, R.D.,Vocadlo, D.J.,Boraston, A.B. Differential Recognition and Hydrolysis of Host Carbohydrate-Antigens by Streptococcus Pneumoniae Family 98 Glycoside Hydrolases. J.Biol.Chem. 2009 284 26161 0 2WMJ 19608744 Crystal structure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 (Sp3GH98) in complex with the B-trisaccharide blood group antigen. 2009-06-30 2009-07-14 Higgins, M.A.,Whitworth, G.E.,El Warry, N.,Randriantsoa, M.,Samain, E.,Burke, R.D.,Vocadlo, D.J.,Boraston, A.B. Differential Recognition and Hydrolysis of Host Carbohydrate-Antigens by Streptococcus Pneumoniae Family 98 Glycoside Hydrolases. J.Biol.Chem. 2009 284 26161 0 2WMK 19608744 Crystal structure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 (Sp3GH98) in complex with the A-LewisY pentasaccharide blood group antigen. 2009-06-30 2009-07-14 Higgins, M.A.,Whitworth, G.E.,El Warry, N.,Randriantsoa, M.,Samain, E.,Burke, R.D.,Vocadlo, D.J.,Boraston, A.B. Differential Recognition and Hydrolysis of Host Carbohydrate-Antigens by Streptococcus Pneumoniae Family 98 Glycoside Hydrolases. J.Biol.Chem. 2009 284 26161 0 3I7J Crystal Structure of a beta-lactamase (Mb2281c) from Mycobacterium bovis, Northeast Structural Genomics Consortium Target MbR246 2009-07-08 2009-07-14 Forouhar, F.,Lew, S.,Seetharaman, J.,Sahdev, S.,Xiao, R.,Ciccosanti, C.,Wang, H.,Everett, J.K.,Nair, R.,Acton, T.B.,Rost, B.,Montelione, G.T.,Hunt, J.F.,Tong, L. Northeast Structural Genomics Consortium Target MbR246 To be Published 0 0 0 0 3FUJ 19618939 Leukotriene A4 hydrolase in complex with 5-[2-(1H-pyrrol-1-yl)ethoxy]-1H-indole 2009-01-14 2009-07-28 Davies, D.R.,Mamat, B.,Magnusson, O.T.,Christensen, J.,Haraldsson, M.H.,Mishra, R.,Pease, B.,Hansen, E.,Singh, J.,Zembower, D.,Kim, H.,Kiselyov, A.S.,Burgin, A.B.,Gurney, M.E.,Stewart, L.J. Discovery of leukotriene A4 hydrolase inhibitors using metabolomics biased fragment crystallography. J.Med.Chem. 2009 52 4694 4715 3IEF Crystal structure of tRNA guanine-n1-methyltransferase from Bartonella henselae using MPCS. 2009-07-22 2009-08-11 Edwards, T.E.,Stahl, G.,Gerdts, C.J.,Staker, B.L.,Accelerated Technologies Center for Gene to 3D Structure (ATCG3D),Seattle Structural Genomics Center for Infectious Disease (SSGCID) Crystal structure of tRNA guanine-n1-methyltransferase from Bartonella henselae using MPCS. To be Published 0 0 0 0 3H5S 19709881 Hepatitis C virus polymerase NS5B with saccharin inhibitor 2009-04-22 2009-09-08 de Vicente, J.,Hendricks, R.T.,Smith, D.B.,Fell, J.B.,Fischer, J.,Spencer, S.R.,Stengel, P.J.,Mohr, P.,Robinson, J.E.,Blake, J.F.,Hilgenkamp, R.K.,Yee, C.,Adjabeng, G.,Elworthy, T.R.,Li, J.,Wang, B.,Bamberg, J.T.,Harris, S.F.,Wong, A.,Leveque, V.J.,Najera, I.,Le Pogam, S.,Rajyaguru, S.,Ao-Ieong, G.,Alexandrova, L.,Larrabee, S.,Brandl, M.,Briggs, A.,Sukhtankar, S.,Farrell, R. Non-nucleoside inhibitors of HCV polymerase NS5B. Part 4: structure-based design, synthesis, and biological evaluation of benzo[d]isothiazole-1,1-dioxides Bioorg.Med.Chem.Lett. 2009 19 5652 5656 2WSQ MonoTIM mutant RMM0-1, dimeric form. 2009-09-08 2009-09-15 Rudino-Pinera, E.,Rojas-Trejo, S.P.,Arreola, R.,Saab-Rincon, G.,Soberon, X.,Horjales, E. Space Group Transition Driven by Temperature and Related to Monomer-Dimer Transition in Solution: The Case of Monomeric Tim of Trypanosoma Brucei Brucei To be Published 0 0 0 0 2WSR MONOTIM MUTANT RMM0-1, MONOMERIC FORM. 2009-09-08 2009-09-15 Rudino-Pinera, E.,Rojas-Trejo, S.P.,Arreola, R.,Saab-Rincon, G.,Soberon, X.,Horjales, E. Space Group Transition Driven by Temperature and Related to Monomer-Dimer Transition in Solution: The Case of Monomeric Tim of Trypanosoma Brucei Brucei To be Published 0 0 0 0 3HD3 19773167 High resolution crystal structure of cruzain bound to the vinyl sulfone inhibitor SMDC-256047 2009-05-06 2009-10-06 Bryant, C.,Kerr, I.D.,Debnath, M.,Ang, K.K.,Ratnam, J.,Ferreira, R.S.,Jaishankar, P.,Zhao, D.,Arkin, M.R.,McKerrow, J.H.,Brinen, L.S.,Renslo, A.R. Novel non-peptidic vinylsulfones targeting the S2 and S3 subsites of parasite cysteine proteases. Bioorg.Med.Chem.Lett. 2009 19 6218 6221 3F0L 20557110 Crystal structure of oxidized D105N Synechocystis sp. PcyA 2008-10-25 2009-10-13 Kohler, A.C.,Gae, D.D.,Richley, M.A.,Stoll, S.,Gunn, A.,Lim, S.,Martin, S.S.,Doukov, T.I.,Britt, R.D.,Ames, J.B.,Lagarias, J.C.,Fisher, A.J. Structural basis for hydration dynamics in radical stabilization of bilin reductase mutants. Biochemistry 2010 49 6206 6218 3F0M 20557110 Crystal structure of radical D105N Synechocystis sp. PcyA 2008-10-25 2009-10-13 Kohler, A.C.,Gae, D.D.,Richley, M.A.,Stoll, S.,Gunn, A.,Lim, S.,Martin, S.S.,Doukov, T.I.,Britt, R.D.,Ames, J.B.,Lagarias, J.C.,Fisher, A.J. Structural basis for hydration dynamics in radical stabilization of bilin reductase mutants. Biochemistry 2010 49 6206 6218 3HSP 19791770 Ternary structure of neuronal nitric oxide synthase with NHA and NO bound(2) 2009-06-10 2009-10-20 Doukov, T.,Li, H.,Soltis, M.,Poulos, T.L. Single crystal structural and absorption spectral characterizations of nitric oxide synthase complexed with N(omega)-hydroxy-L-arginine and diatomic ligands. Biochemistry 2009 48 10246 10254 3I2Q 19634899 Crystal structure of the hairpin ribozyme with 2'OMe substrate strand and N1-deazaadenosine at position A9 2009-06-29 2009-11-03 Spitale, R.C.,Volpini, R.,Mungillo, M.V.,Krucinska, J.,Cristalli, G.,Wedekind, J.E. Single-atom imino substitutions at A9 and A10 reveal distinct effects on the fold and function of the hairpin ribozyme catalytic core. Biochemistry 2009 48 7777 7779 3I2R 19634899 Crystal structure of the hairpin ribozyme with a 2',5'-linked substrate with N1-deazaadenosine at position A9 2009-06-29 2009-11-03 Spitale, R.C.,Volpini, R.,Mungillo, M.V.,Krucinska, J.,Cristalli, G.,Wedekind, J.E. Single-atom imino substitutions at A9 and A10 reveal distinct effects on the fold and function of the hairpin ribozyme catalytic core. Biochemistry 2009 48 7777 7779 3I2S 19634899 Crystal structure of the hairpin ribozyme with a 2'OMe substrate and N1-deazaadenosine at position A10 2009-06-29 2009-11-03 Spitale, R.C.,Volpini, R.,Mungillo, M.V.,Krucinska, J.,Cristalli, G.,Wedekind, J.E. Single-atom imino substitutions at A9 and A10 reveal distinct effects on the fold and function of the hairpin ribozyme catalytic core. Biochemistry 2009 48 7777 7779 3I2U 19634899 Crystal structure of the haiprin ribozyme with a 2',5'-linked substrate and N1-deazaadenosine at position A10 2009-06-29 2009-11-03 Spitale, R.C.,Volpini, R.,Mungillo, M.V.,Krucinska, J.,Cristalli, G.,Wedekind, J.E. Single-atom imino substitutions at A9 and A10 reveal distinct effects on the fold and function of the hairpin ribozyme catalytic core. Biochemistry 2009 48 7777 7779 3HX9 19917297 Structure of heme-degrader, MhuD (Rv3592), from Mycobacterium tuberculosis with two hemes bound in its active site 2009-06-19 2009-12-01 Chim, N.,Iniguez, A.,Nguyen, T.Q.,Goulding, C.W. Unusual Diheme Conformation of the Heme-Degrading Protein from Mycobacterium tuberculosis J.Mol.Biol. 2009 395 595 608 2WUC 20004165 Crystal structure of HGFA in complex with the allosteric non- inhibitory antibody Fab40.deltaTrp and Ac-KQLR-chloromethylketone 2009-10-01 2009-12-15 Ganesan, R.,Eigenbrot, C.,Wu, Y.,Liang, W.C.,Shia, S.,Lipari, M.T.,Kirchhofer, D. Unraveling the Allosteric Mechanism of Serine Protease Inhibition by an Antibody Structure 2009 17 1614 0 3HXZ 20010690 Crystal Structure of catalytic fragment of E. coli AlaRS G237A in complex with AlaSA 2009-06-22 2009-12-15 Guo, M.,Chong, Y.E.,Shapiro, R.,Beebe, K.,Yang, X.L.,Schimmel, P. Paradox of mistranslation of serine for alanine caused by AlaRS recognition dilemma. Nature 2009 462 808 812 3HY0 20010690 Crystal Structure of catalytic fragment of E. coli AlaRS G237A in complex with GlySA 2009-06-22 2009-12-15 Guo, M.,Chong, Y.E.,Shapiro, R.,Beebe, K.,Yang, X.L.,Schimmel, P. Paradox of mistranslation of serine for alanine caused by AlaRS recognition dilemma. Nature 2009 462 808 812 3HY1 20010690 Crystal Structure of catalytic fragment of E. coli AlaRS G237A in complex with SerSA 2009-06-22 2009-12-15 Guo, M.,Chong, Y.E.,Shapiro, R.,Beebe, K.,Yang, X.L.,Schimmel, P. Paradox of mistranslation of serine for alanine caused by AlaRS recognition dilemma. Nature 2009 462 808 812 3I06 19908842 Crystal structure of cruzain covalently bound to a purine nitrile 2009-06-24 2009-12-15 Mott, B.T.,Ferreira, R.S.,Simeonov, A.,Jadhav, A.,Ang, K.K.,Leister, W.,Shen, M.,Silveira, J.T.,Doyle, P.S.,Arkin, M.R.,McKerrow, J.H.,Inglese, J.,Austin, C.P.,Thomas, C.J.,Shoichet, B.K.,Maloney, D.J. Identification and optimization of inhibitors of trypanosomal cysteine proteases: cruzain, rhodesain, and TbCatB. J.Med.Chem. 2010 53 52 60 3KZU Crystal structure of 3-oxoacyl-(acyl carrier protein) synthase II from Brucella melitensis 2009-12-08 2009-12-15 Edwards, T.E.,Abendroth, J.,Seattle Structural Genomics Center for Infectious Disease (SSGCID) Crystal structure of 3-oxoacyl-(acyl carrier protein) synthase II from Brucella melitensis TO BE PUBLISHED 0 0 0 0 3KXQ Crystal structure of triosephosphate isomerase from bartonella henselae at 1.6A resolution 2009-12-03 2009-12-22 Seattle Structural Genomics Center for Infectious Disease (SSGCID),Abendroth, J.,Edwards, T.E.,Staker, B. Crystal structure of triosephosphate isomerase from bartonella henselae at 1.6A resolution To be Published 0 0 0 0 3A3X 19966226 Structure of OpdA mutant (G60A/A80V/R118Q/K185R/Q206P/D208G/I260T/G273S) 2009-06-23 2010-01-12 Jackson, C.J.,Foo, J.-L.,Tokuriki, N.,Afriat, L.,Carr, P.D.,Kim, H.-K.,Schenk, G.,Tawfik, D.S.,Ollis, D.L. Conformational sampling, catalysis, and evolution of the bacterial phosphotriesterase Proc.Natl.Acad.Sci.USA 2009 0 0 0 3A3X 19966226 Structure of OpdA mutant (G60A/A80V/R118Q/K185R/Q206P/D208G/I260T/G273S) 2009-06-23 2010-01-12 Jackson, C.J.,Foo, J.-L.,Tokuriki, N.,Afriat, L.,Carr, P.D.,Kim, H.-K.,Schenk, G.,Tawfik, D.S.,Ollis, D.L. Conformational sampling, catalysis, and evolution of the bacterial phosphotriesterase Proc.Natl.Acad.Sci.USA 2009 0 0 0 3JT8 20014790 Structure of neuronal nitric oxide synthase heme domain complexed with N~5~-{3-[(1-methylethyl)sulfanyl]propanimidoyl}-L-ornithine 2009-09-11 2010-01-12 Martell, J.D.,Li, H.,Doukov, T.,Martasek, P.,Roman, L.J.,Soltis, M.,Poulos, T.L.,Silverman, R.B. Heme-coordinating inhibitors of neuronal nitric oxide synthase. Iron-thioether coordination is stabilized by hydrophobic contacts without increased inhibitor potency. J.Am.Chem.Soc. 2010 132 798 806 3ILQ 20080535 Structure of mCD1d with bound glycolipid BbGL-2c from Borrelia burgdorferi 2009-08-07 2010-01-26 Wang, J.,Li, Y.,Kinjo, Y.,Mac, T.T.,Gibson, D.,Painter, G.F.,Kronenberg, M.,Zajonc, D.M. Lipid binding orientation within CD1d affects recognition of Borrelia burgorferi antigens by NKT cells. Proc.Natl.Acad.Sci.USA 2010 107 1535 1540 3ITC 20000809 Crystal structure of Sco3058 with bound citrate and glycerol 2009-08-28 2010-02-02 Cummings, J.A.,Nguyen, T.T.,Fedorov, A.A.,Kolb, P.,Xu, C.,Fedorov, E.V.,Shoichet, B.K.,Barondeau, D.P.,Almo, S.C.,Raushel, F.M. Structure, mechanism, and substrate profile for Sco3058: the closest bacterial homologue to human renal dipeptidase Biochemistry 2010 49 611 622 3HEF 20133842 Crystal structure of the bacteriophage Sf6 terminase small subunit 2009-05-08 2010-02-09 Zhao, H.,Finch, C.J.,Sequeira, R.D.,Johnson, B.A.,Johnson, J.E.,Casjens, S.R.,Tang, L. Crystal structure of the DNA-recognition component of the bacterial virus Sf6 genome-packaging machine Proc.Natl.Acad.Sci.USA 2010 107 1971 1976 3HNJ 20080561 Crystal structure of the Zn-induced tetramer of the engineered cyt cb562 variant RIDC-2 2009-05-31 2010-02-09 Salgado, E.N.,Ambroggio, X.I.,Brodin, J.D.,Lewis, R.A.,Kuhlman, B.,Tezcan, F.A. Metal templated design of protein interfaces. Proc.Natl.Acad.Sci.USA 2010 107 1827 1832 3JS8 20102741 Solvent-stable cholesterol oxidase 2009-09-09 2010-02-09 Sagermann, M.,Ohtaki, A.,Newton, K.,Doukyu, N. Structural characterization of the organic solvent-stable cholesterol oxidase from Chromobacterium sp. DS-1. J.Struct.Biol. 2010 170 32 40 3JVG 20100930 Crystal Structure of chicken CD1-1 2009-09-16 2010-02-09 Dvir, H.,Wang, J.,Ly, N.,Dascher, C.C.,Zajonc, D.M. Structural basis for lipid-antigen recognition in avian immunity. J.Immunol. 2010 184 2504 2511 3KFN 20659109 HIV Protease (PR) with inhibitor TL-3 and fragment hit 4D9 by soaking 2009-10-27 2010-02-23 Perryman, A.L.,Zhang, Q.,Soutter, H.H.,Rosenfeld, R.,McRee, D.E.,Olson, A.J.,Elder, J.E.,David Stout, C. Fragment-based screen against HIV protease. Chem.Biol.Drug Des. 2010 75 257 268 3KFP 20659109 HIV Protease (PR) with inhibitor TL-3 bound, and DMSOs in exo site 2009-10-27 2010-02-23 Perryman, A.L.,Zhang, Q.,Soutter, H.H.,Rosenfeld, R.,McRee, D.E.,Olson, A.J.,Elder, J.E.,David Stout, C. Fragment-based screen against HIV protease. Chem.Biol.Drug Des. 2010 75 257 268 3KFR 20659109 HIV Protease (PR) dimer with inhibitor TL-3 bound and fragment 1F1 in the outside/top of flap 2009-10-27 2010-02-23 Perryman, A.L.,Zhang, Q.,Soutter, H.H.,Rosenfeld, R.,McRee, D.E.,Olson, A.J.,Elder, J.E.,David Stout, C. Fragment-based screen against HIV protease. Chem.Biol.Drug Des. 2010 75 257 268 3KFS 20659109 HIV Protease (PR) dimer with inhibitor TL-3 bound and fragment 2F4 in the outside/top of flap 2009-10-28 2010-02-23 Perryman, A.L.,Zhang, Q.,Soutter, H.H.,Rosenfeld, R.,McRee, D.E.,Olson, A.J.,Elder, J.E.,David Stout, C. Fragment-based screen against HIV protease. Chem.Biol.Drug Des. 2010 75 257 268 3IUT 20088534 The Crystal Structure of Cruzain in Complex with a Tetrafluorophenoxymethyl Ketone Inhibitor 2009-08-31 2010-03-02 Brak, K.,Kerr, I.D.,Barrett, K.T.,Fuchi, N.,Debnath, M.,Ang, K.,Engel, J.C.,McKerrow, J.H.,Doyle, P.S.,Brinen, L.S.,Ellman, J.A. Nonpeptidic tetrafluorophenoxymethyl ketone cruzain inhibitors as promising new leads for chagas disease chemotherapy. J.Med.Chem. 2010 53 1763 1773 3LVX 20220136 Crystal structure of human alpha-defensin 1 (I6A mutant) 2010-02-22 2010-03-09 Wei, G.,Pazgier, M.,de Leeuw, E.,Rajabi, M.,Li, J.,Zou, G.,Jung, G.,Yuan, W.,Lu, W.Y.,Lehrer, R.I.,Lu, W. Trp-26 imparts functional versatility to human alpha-defensin HNP1. J.Biol.Chem. 2010 285 16275 16285 3M1X Crystal structure of a putative endoribonuclease L-PSP from Entamoeba histolytica, rhomobohedral form 2010-03-05 2010-03-31 Gardberg, A.,Abendroth, J.,Davies, D.,Staker, B. Crystal structure of a putative endoribonuclease L-PSP from Entamoeba histolytica, rhomobohedral form To be Published 0 0 0 0 3MBF 21904050 Crystal structure of fructose bisphosphate aldolase from Encephalitozoon cuniculi, bound to fructose 1,6-bisphosphate 2010-03-25 2010-04-07 Gardberg, A.,Sankaran, B.,Davies, D.,Bhandari, J.,Staker, B.,Stewart, L. Structure of fructose bisphosphate aldolase from Encephalitozoon cuniculi. Acta Crystallogr.,Sect.F 2011 67 1055 1059 3M5Q 20356630 0.93 A Structure of Manganese-Bound Manganese Peroxidase 2010-03-12 2010-04-14 Sundaramoorthy, M.,Gold, M.H.,Poulos, T.L. Ultrahigh (0.93A) resolution structure of manganese peroxidase from Phanerochaete chrysosporium: implications for the catalytic mechanism. J.Inorg.Biochem. 2010 104 683 690 3M8M 20356630 1.05 A Structure of Manganese-free Manganese Peroxidase 2010-03-18 2010-04-14 Sundaramoorthy, M.,Gold, M.H.,Poulos, T.L. Ultrahigh (0.93A) resolution structure of manganese peroxidase from Phanerochaete chrysosporium: implications for the catalytic mechanism. J.Inorg.Biochem. 2010 104 683 690 3L61 20297780 Crystal structure of substrate-free P450cam at 200 mM [K+] 2009-12-22 2010-04-21 Lee, Y.T.,Wilson, R.F.,Rupniewski, I.,Goodin, D.B. P450cam visits an open conformation in the absence of substrate. Biochemistry 2010 49 3412 3419 3L62 20297780 Crystal structure of substrate-free P450cam at low [K+] 2009-12-22 2010-04-21 Lee, Y.T.,Wilson, R.F.,Rupniewski, I.,Goodin, D.B. P450cam visits an open conformation in the absence of substrate. Biochemistry 2010 49 3412 3419 3MDX Crystal structure of deoxyuridine 5-triphosphate nucleotidohydrolase from Brucella melitensis, rhombohedral crystal form 2010-03-31 2010-04-21 Abendroth, J.,Gardberg, A.S.,Staker, B. Crystal structure of deoxyuridine 5-triphosphate nucleotidohydrolase from Brucella melitensis, rhombohedral crystal form To be Published 0 0 0 0 3JWW 20337441 Structure of endothelial nitric oxide synthase heme domain complexed with N1-[(3'S,4'S)-4'-((6""-amino-4""-methylpyridin-2""-yl)methyl)pyrrolidin-3'-yl]-N2- (3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride 2009-09-18 2010-05-05 Delker, S.L.,Ji, H.,Li, H.,Jamal, J.,Fang, J.,Xue, F.,Silverman, R.B.,Poulos, T.L. Unexpected binding modes of nitric oxide synthase inhibitors effective in the prevention of a cerebral palsy phenotype in an animal model. J.Am.Chem.Soc. 2010 132 5437 5442 3JWX 20337441 Structure of endothelial nitric oxide synthase heme domain complexed with N1-[(3'R,4'R)-4'-((6""-amino-4""-methylpyridin-2""-yl)methyl)pyrrolidin-3'-yl]-N2-(3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride 2009-09-18 2010-05-05 Delker, S.L.,Ji, H.,Li, H.,Jamal, J.,Fang, J.,Xue, F.,Silverman, R.B.,Poulos, T.L. Unexpected binding modes of nitric oxide synthase inhibitors effective in the prevention of a cerebral palsy phenotype in an animal model. J.Am.Chem.Soc. 2010 132 5437 5442 3JWY 20337441 Structure of endothelial nitric oxide synthase heme domain complexed with N1-{(3'R,4'S)-4'-[(6""-amino-4""-methylpyridin-2""-yl)methyl]pyrrolidin-3'-yl}-N2-(3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride 2009-09-18 2010-05-05 Delker, S.L.,Ji, H.,Li, H.,Jamal, J.,Fang, J.,Xue, F.,Silverman, R.B.,Poulos, T.L. Unexpected binding modes of nitric oxide synthase inhibitors effective in the prevention of a cerebral palsy phenotype in an animal model. J.Am.Chem.Soc. 2010 132 5437 5442 3JWZ 20337441 Structure of endothelial nitric oxide synthase heme domain complexed with N1-[(3' S,4' R)-4'-((6""-amino-4""-methylpyridin-2""-yl)methyl)pyrrolidin-3'-yl]-N2-(3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride 2009-09-18 2010-05-05 Delker, S.L.,Ji, H.,Li, H.,Jamal, J.,Fang, J.,Xue, F.,Silverman, R.B.,Poulos, T.L. Unexpected binding modes of nitric oxide synthase inhibitors effective in the prevention of a cerebral palsy phenotype in an animal model. J.Am.Chem.Soc. 2010 132 5437 5442 3JX6 20337441 Structure of neuronal nitric oxide synthase D597N/M336V/Y706A mutant heme domain complexed with N1-[(3' R,4' R)-4'-((6""-amino-4""-methylpyridin-2""-yl)methyl)pyrrolidin-3'-yl]-N2-(3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride 2009-09-18 2010-05-05 Delker, S.L.,Ji, H.,Li, H.,Jamal, J.,Fang, J.,Xue, F.,Silverman, R.B.,Poulos, T.L. Unexpected binding modes of nitric oxide synthase inhibitors effective in the prevention of a cerebral palsy phenotype in an animal model. J.Am.Chem.Soc. 2010 132 5437 5442 3K9S 20417642 Crystal structure of the peroxide-bound manganese superoxide dismutase. 2009-10-16 2010-05-12 Porta, J.,Vahedi-Faridi, A.,Borgstahl, G.E. Structural Analysis of Peroxide-Soaked MnSOD Crystals Reveals Side-On Binding of Peroxide to Active-Site Manganese. J.Mol.Biol. 2010 399 377 384 3MQW Crystal structure of a putative endoribonuclease L-PSP from Entamoeba histolytica with higher solvent content and an ordered N-terminal tag 2010-04-28 2010-05-12 Gardberg, A.,Abendroth, J.,Staker, B. Crystal structure of a putative endoribonuclease L-PSP from Entamoeba histolytica To be published 0 0 0 0 3HHI 20544024 Crystal Structure of Cathepsin B from T. brucei in complex with CA074 2009-05-15 2010-05-26 Kerr, I.D.,Wu, P.,Marion-Tsukamaki, R.,Mackey, Z.B.,Brinen, L.S. Crystal Structures of TbCatB and rhodesain, potential chemotherapeutic targets and major cysteine proteases of Trypanosoma brucei Plos Negl Trop Dis 2010 4 0 0 3L9R 20519644 Crystal structure of bovine CD1b3 with endogenously bound ligands 2010-01-05 2010-06-16 Girardi, E.,Wang, J.,Mac, T.T.,Versluis, C.,Bhowruth, V.,Besra, G.,Heck, A.J.,Van Rhijn, I.,Zajonc, D.M. Crystal structure of bovine CD1b3 with endogenously bound ligands. J.Immunol. 2010 185 376 386 3M79 20515031 A tetrameric Zn-bound cytochrome cb562 complex with covalently and non-covalently stabilized interfaces crystallized in the presence of Cu(II) and Zn(II) 2010-03-16 2010-06-16 Brodin, J.D.,Medina-Morales, A.,Ni, T.,Salgado, E.N.,Ambroggio, X.I.,Tezcan, F.A. Evolution of metal selectivity in templated protein interfaces. J.Am.Chem.Soc. 2010 132 8610 8617 3MIY 20545945 X-ray crystal structure of ITK complexed with sunitinib 2010-04-12 2010-06-30 Kutach, A.K.,Villasenor, A.G.,Lam, D.,Belunis, C.,Janson, C.,Lok, S.,Hong, L.N.,Liu, C.M.,Deval, J.,Novak, T.J.,Barnett, J.W.,Chu, W.,Shaw, D.,Kuglstatter, A. Crystal structures of IL-2-inducible T cell kinase complexed with inhibitors: insights into rational drug design and activity regulation. Chem.Biol.Drug Des. 2010 76 154 163 3MJ1 20545945 X-ray crystal structure of ITK complexed with inhibitor RO5191614 2010-04-12 2010-06-30 Kutach, A.K.,Villasenor, A.G.,Lam, D.,Belunis, C.,Janson, C.,Lok, S.,Hong, L.N.,Liu, C.M.,Deval, J.,Novak, T.J.,Barnett, J.W.,Chu, W.,Shaw, D.,Kuglstatter, A. Crystal structures of IL-2-inducible T cell kinase complexed with inhibitors: insights into rational drug design and activity regulation. Chem.Biol.Drug Des. 2010 76 154 163 3MJ2 20545945 X-ray crystal structure of ITK complexed with inhibitor BMS-509744 2010-04-12 2010-06-30 Kutach, A.K.,Villasenor, A.G.,Lam, D.,Belunis, C.,Janson, C.,Lok, S.,Hong, L.N.,Liu, C.M.,Deval, J.,Novak, T.J.,Barnett, J.W.,Chu, W.,Shaw, D.,Kuglstatter, A. Crystal structures of IL-2-inducible T cell kinase complexed with inhibitors: insights into rational drug design and activity regulation. Chem.Biol.Drug Des. 2010 76 154 163 3LZO 20600116 Crystal Structure Analysis of the copper-reconstituted P19 protein from Campylobacter jejuni at 1.65 A at pH 10.0 2010-03-01 2010-07-21 Chan, A.C.,Doukov, T.I.,Scofield, M.,Tom-Yew, S.A.,Ramin, A.B.,Mackichan, J.K.,Gaynor, E.C.,Murphy, M.E. Structure and Function of P19, a High-Affinity Iron Transporter of the Human Pathogen Campylobacter jejuni. J.Mol.Biol. 2010 401 590 604 3N51 21116453 Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with bumped kinase inhibitor RM-1-95 2010-05-24 2010-07-21 Murphy, R.C.,Ojo, K.K.,Larson, E.T.,Castellanos-Gonzalez, A.,Perera, B.G.,Keyloun, K.R.,Kim, J.E.,Bhandari, J.G.,Muller, N.R.,Verlinde, C.L.,White, A.C.,Merritt, E.A.,Van Voorhis, W.C.,Maly, D.J. Discovery of Potent and Selective Inhibitors of Calcium-Dependent Protein Kinase 1 (CDPK1) from C. parvum and T. gondii. ACS Med Chem Lett 2010 1 331 335 3NQS 20659888 Crystal Structure of Inducible Nitric Oxide Synthase with N-Nitrosated-pterin 2010-06-29 2010-07-21 Rosenfeld, R.J.,Bonaventura, J.,Szymczyna, B.R.,MacCoss, M.J.,Arvai, A.S.,Yates, J.R.,Tainer, J.A.,Getzoff, E.D. Nitric-oxide synthase forms N-NO-pterin and S-NO-cys: implications for activity, allostery, and regulation. J.Biol.Chem. 2010 285 31581 31589 3NWH 20880831 Crystal structure of BST2/Tetherin 2010-07-09 2010-07-21 Schubert, H.L.,Zhai, Q.,Sandrin, V.,Eckert, D.M.,Garcia-Maya, M.,Saul, L.,Sundquist, W.I.,Steiner, R.A.,Hill, C.P. Structural and functional studies on the extracellular domain of BST2/tetherin in reduced and oxidized conformations. Proc.Natl.Acad.Sci.USA 2010 107 17951 17956 3MDM 20667828 Thioperamide complex of Cytochrome P450 46A1 2010-03-30 2010-07-28 Mast, N.,Charvet, C.,Pikuleva, I.A.,Stout, C.D. Structural basis of drug binding to CYP46A1, an enzyme that controls cholesterol turnover in the brain. J.Biol.Chem. 2010 285 31783 31795 3MDR 20667828 Tranylcypromine complex of Cytochrome P450 46A1 2010-03-30 2010-07-28 Mast, N.,Charvet, C.,Pikuleva, I.A.,Stout, C.D. Structural basis of drug binding to CYP46A1, an enzyme that controls cholesterol turnover in the brain. J.Biol.Chem. 2010 285 31783 31795 3MDT 20667828 Voriconazole complex of Cytochrome P450 46A1 2010-03-30 2010-07-28 Mast, N.,Charvet, C.,Pikuleva, I.A.,Stout, C.D. Structural basis of drug binding to CYP46A1, an enzyme that controls cholesterol turnover in the brain. J.Biol.Chem. 2010 285 31783 31795 3MDV 20667828 Clotrimazole complex of Cytochrome P450 46A1 2010-03-30 2010-07-28 Mast, N.,Charvet, C.,Pikuleva, I.A.,Stout, C.D. Structural basis of drug binding to CYP46A1, an enzyme that controls cholesterol turnover in the brain. J.Biol.Chem. 2010 285 31783 31795 3ISI Crystal structure of Sco3058 with bound inhibitor L-Ala-L-Asp Phosphinodipeptide 2009-08-25 2010-08-04 Nguyen, T.T.,Cummings, J.A.,Tsai, C.-L.,Barondeau, D.P.,Raushel, F.M. Crystal structure of Sco3058 with bound inhibitor L-Ala-L-Asp Phosphinodipeptide To be Published 0 0 0 0 3N2R 20673724 Structure of neuronal nitric oxide synthase heme domain in complex with 6-(((3R,4R/3S,4S)-4-(3-Phenoxyphenoxy)pyrrolidin-3-yl)methyl)pyridin-2-amine 2010-05-18 2010-08-18 Xue, F.,Huang, J.,Ji, H.,Fang, J.,Li, H.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Structure-based design, synthesis, and biological evaluation of lipophilic-tailed monocationic inhibitors of neuronal nitric oxide synthase. Bioorg.Med.Chem. 2010 18 6526 6537 3NPL Structure of Ru(bpy)2(A-Phen)(K97C) P450 BM3 heme domain, a ruthenium modified P450 BM3 mutant 2010-06-28 2010-08-25 Ener, M.,Lee, Y.-T.,Goodin, D.B.,Winkler, J.R.,Gray, H.B.,Cheruzel, L. Structure of Ru(bpy)2(A-Phen)(K97C) P450 BM3 heme domain, a ruthenium modified P450 BM3 mutant To be Published 0 0 0 0 3MWG Crystal structure of Staphylococcus aureus SirA 2010-05-05 2010-09-01 Grigg, J.C.,Cheung, J.,Heinrichs, D.E.,Murphy, M.E. Staphylococcus aureus SirA specificity for staphyloferrin B is driven by localized conformational change To be Published 0 0 0 0 3MPV 20851901 Structure of EUTL in the zinc-induced open form 2010-04-27 2010-09-22 Takenoya, M.,Nikolakakis, K.,Sagermann, M. Crystallographic insights into the pore structures and mechanisms of the EutL and EutM shell proteins of the ethanolamine-utilizing microcompartment of Escherichia coli. J.Bacteriol. 2010 192 6056 6063 3MPY 20851901 Structure of EUTM in 2-D protein membrane 2010-04-27 2010-09-22 Takenoya, M.,Nikolakakis, K.,Sagermann, M. Crystallographic insights into the pore structures and mechanisms of the EutL and EutM shell proteins of the ethanolamine-utilizing microcompartment of Escherichia coli. J.Bacteriol. 2010 192 6056 6063 3MVR 20880847 Crystal Structure of cytochrome P450 2B4-H226Y in a closed conformation 2010-05-04 2010-09-29 Wilderman, P.R.,Shah, M.B.,Liu, T.,Li, S.,Hsu, S.,Roberts, A.G.,Goodlett, D.R.,Zhang, Q.,Woods, V.L.,Stout, C.D.,Halpert, J.R. Plasticity of Cytochrome P450 2B4 as Investigated by Hydrogen-Deuterium Exchange Mass Spectrometry and X-ray Crystallography. J.Biol.Chem. 2010 285 38602 38611 3O8X 20921281 Recognition of Glycolipid Antigen by iNKT Cell TCR 2010-08-03 2010-09-29 Li, Y.,Girardi, E.,Wang, J.,Yu, E.D.,Painter, G.F.,Kronenberg, M.,Zajonc, D.M. The V alpha 14 invariant natural killer T cell TCR forces microbial glycolipids and CD1d into a conserved binding mode. J.Exp.Med. 2010 207 2383 2393 3O9W 20921281 Recognition of a Glycolipid Antigen by the iNKT Cell TCR 2010-08-04 2010-09-29 Li, Y.,Girardi, E.,Wang, J.,Yu, E.D.,Painter, G.F.,Kronenberg, M.,Zajonc, D.M. The V alpha 14 invariant natural killer T cell TCR forces microbial glycolipids and CD1d into a conserved binding mode. J.Exp.Med. 2010 207 2383 2393 3NB8 20557110 Crystal structure of oxidized H88Q Synechocystis sp. PCYA 2010-06-03 2010-10-06 Kohler, A.C.,Gae, D.D.,Richley, M.A.,Stoll, S.,Gunn, A.,Lim, S.,Martin, S.S.,Doukov, T.I.,Britt, R.D.,Ames, J.B.,Lagarias, J.C.,Fisher, A.J. Structural basis for hydration dynamics in radical stabilization of bilin reductase mutants. Biochemistry 2010 49 6206 6218 3NB9 20557110 Crystal structure of radical H88Q Synechocystis sp. PCYA 2010-06-03 2010-10-06 Kohler, A.C.,Gae, D.D.,Richley, M.A.,Stoll, S.,Gunn, A.,Lim, S.,Martin, S.S.,Doukov, T.I.,Britt, R.D.,Ames, J.B.,Lagarias, J.C.,Fisher, A.J. Structural basis for hydration dynamics in radical stabilization of bilin reductase mutants. Biochemistry 2010 49 6206 6218 3NBQ 20856879 Human uridine phosphorylase 1 (hUPP1) with 5-fluorouracil 2010-06-03 2010-10-06 Roosild, T.P.,Castronovo, S. Active site conformational dynamics in human uridine phosphorylase 1. Plos One 2010 5 0 0 3NNY 20833542 Structure of rat neuronal nitric oxide synthase heme domain complexed with 6-(((3R,4R)-4-(2-(3-Fluorophenethylamino)ethoxy)pyrrolidin-3-yl)methyl)pyridin-2-amine 2010-06-24 2010-10-06 Xue, F.,Li, H.,Fang, J.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Peripheral but crucial: a hydrophobic pocket (Tyr(706), Leu(337), and Met(336)) for potent and selective inhibition of neuronal nitric oxide synthase. Bioorg.Med.Chem.Lett. 2010 20 6258 6261 3NNZ 20833542 Structure of rat neuronal nitric oxide synthase heme domain complexed with 6-(((3S,4S)-4-(2-(3-Fluorophenethylamino)ethoxy)pyrrolidin-3-yl)methyl)pyridin-2-amine 2010-06-24 2010-10-06 Xue, F.,Li, H.,Fang, J.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Peripheral but crucial: a hydrophobic pocket (Tyr(706), Leu(337), and Met(336)) for potent and selective inhibition of neuronal nitric oxide synthase. Bioorg.Med.Chem.Lett. 2010 20 6258 6261 2XU6 21149566 MDV1 coiled coil domain 2010-10-14 2010-10-27 Koirala, S.,Bui, H.T.,Schubert, H.L.,Eckert, D.M.,Hill, C.P.,Kay, M.S.,Shaw, J.M. Molecular Architecture of a Dynamin Adaptor: Implications for Assembly of Mitochondrial Fission Complexes J.Cell Biol. 2010 191 1127 0 3NLD 20958055 Structure of endothelial nitric oxide synthase heme domain complexed with 6-{{(3'S,4'S)-3'-[2""-(3'''-fluorophenethylamino)ethoxy]pyrrolidin-4'-yl}methyl}-4-methylpyridin-2-amine 2010-06-21 2010-11-03 Ji, H.,Delker, S.L.,Li, H.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Exploration of the Active Site of Neuronal Nitric Oxide Synthase by the Design and Synthesis of Pyrrolidinomethyl 2-Aminopyridine Derivatives. J.Med.Chem. 2010 53 7804 7824 3NLE 20958055 Structure of endothelial nitric oxide synthase heme domain complexed with 6-{{(3'R,4'R)-3'-[2""-(3'''-fluorophenethylamino)ethoxy]pyrrolidin-4'-yl}methyl}-4-methylpyridin-2-amine 2010-06-21 2010-11-03 Ji, H.,Delker, S.L.,Li, H.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Exploration of the Active Site of Neuronal Nitric Oxide Synthase by the Design and Synthesis of Pyrrolidinomethyl 2-Aminopyridine Derivatives. J.Med.Chem. 2010 53 7804 7824 3NLH 20958055 Structure of endothelial nitric oxide synthase heme domain N368D mutant complexed with 6-{{(3'S,4'S)-3'-[2""-(3'''-fluorophenethylamino)ethoxy]pyrrolidin-4'-yl}methyl}-4-methylpyridin-2-amine 2010-06-21 2010-11-03 Ji, H.,Delker, S.L.,Li, H.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Exploration of the Active Site of Neuronal Nitric Oxide Synthase by the Design and Synthesis of Pyrrolidinomethyl 2-Aminopyridine Derivatives. J.Med.Chem. 2010 53 7804 7824 3NLI 20958055 Structure of endothelial nitric oxide synthase N368D mutant heme domain complexed with 6-{{(3'R,4'R)-3'-[2""-(3'''-fluorophenethylamino)ethoxy]pyrrolidin-4'-yl}methyl}-4-methylpyridin-2-amine 2010-06-21 2010-11-03 Ji, H.,Delker, S.L.,Li, H.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Exploration of the Active Site of Neuronal Nitric Oxide Synthase by the Design and Synthesis of Pyrrolidinomethyl 2-Aminopyridine Derivatives. J.Med.Chem. 2010 53 7804 7824 3NLJ 20958055 Structure of neuronal nitric oxide synthase D597N/M336V/Y706A triple mutant heme domain complexed with 6-{{(3'R,4'R)-3'-[2""-(3'''-fluorophenethylamino)ethoxy] pyrrolidin-4'-yl}methyl}-4-methylpyridin-2-amine 2010-06-21 2010-11-03 Ji, H.,Delker, S.L.,Li, H.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Exploration of the Active Site of Neuronal Nitric Oxide Synthase by the Design and Synthesis of Pyrrolidinomethyl 2-Aminopyridine Derivatives. J.Med.Chem. 2010 53 7804 7824 3L9W 21041667 KefC C-terminal domain in complex with KefF and GSH 2010-01-05 2010-11-17 Roosild, T.P.,Castronovo, S.,Healy, J.,Miller, S.,Pliotas, C.,Rasmussen, T.,Bartlett, W.,Conway, S.J.,Booth, I.R. Mechanism of ligand-gated potassium efflux in bacterial pathogens. Proc.Natl.Acad.Sci.USA 2010 107 19784 19789 3OL5 Crystal Structure of Cytochrome P450cam crystallized with a tethered substrate analog 3OH-AdaC1-C8-Dans 2010-08-25 2010-11-17 Lee, Y.-T.,Glazer, E.C.,Wilson, R.F.,Goodin, D.B. Crystal Structure of Cytochrome P450cam crystallized with a tethered substrate analog 3OH-AdaC1-C8-Dans To be Published 0 0 0 0 3P6N Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog AdaC1-C8-Dans 2010-10-11 2010-11-17 Lee, Y.-T.,Glazer, E.C.,Wilson, R.F.,Goodin, D.B. Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog AdaC1-C8-Dans To be Published 0 0 0 0 3P6R Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog 3OH-AdaC1-Etg-Boc 2010-10-11 2010-11-17 Lee, Y.-T.,Glazer, E.C.,Wilson, R.F.,Goodin, D.B. Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog 3OH-AdaC1-Etg-Boc To be Published 0 0 0 0 3P6V Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog 3Et-AdaC1-Etg-Boc 2010-10-11 2010-11-17 Lee, Y.-T.,Glazer, E.C.,Wilson, R.F.,Goodin, D.B. Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog 3Et-AdaC1-Etg-Boc To be Published 0 0 0 0 3P6W Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog AdaC3-Etg-Boc 2010-10-11 2010-11-17 Lee, Y.-T.,Glazer, E.C.,Wilson, R.F.,Goodin, D.B. Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog AdaC3-Etg-Boc To be Published 0 0 0 0 3MQY 21206063 SgrAI with cleaved DNA and Magnesium bound 2010-04-28 2010-11-24 Little, E.J.,Dunten, P.W.,Bitinaite, J.,Horton, N.C. New clues in the allosteric activation of DNA cleavage by SgrAI: structures of SgrAI bound to cleaved primary-site DNA and uncleaved secondary-site DNA. Acta Crystallogr.,Sect.D 2011 67 67 74 3MXR 21041505 SHV-1 beta-lactamase complex with compound 1 2010-05-07 2010-11-24 Ke, W.,Sampson, J.M.,Ori, C.,Prati, F.,Drawz, S.M.,Bethel, C.R.,Bonomo, R.A.,van den Akker, F. Novel Insights into the Mode of Inhibition of Class A SHV-1 {beta}-Lactamases Revealed by Boronic Acid Transition State Inhibitors. Antimicrob.Agents Chemother. 2011 55 174 183 3MXS 21041505 SHV-1 beta-lactamase complex with compound 2 2010-05-07 2010-11-24 Ke, W.,Sampson, J.M.,Ori, C.,Prati, F.,Drawz, S.M.,Bethel, C.R.,Bonomo, R.A.,van den Akker, F. Novel Insights into the Mode of Inhibition of Class A SHV-1 {beta}-Lactamases Revealed by Boronic Acid Transition State Inhibitors. Antimicrob.Agents Chemother. 2011 55 174 183 3NMJ 20740227 Crystal structure of a nickel mediated dimer for the phenanthroline-modified cytochrome cb562 variant, MBP-Phen2 2010-06-22 2010-11-24 Radford, R.J.,Lawrenz, M.,Nguyen, P.C.,McCammon, J.A.,Tezcan, F.A. Porous protein frameworks with unsaturated metal centers in sterically encumbered coordination sites. Chem.Commun.(Camb.) 2011 47 313 315 3NMK 20740227 Crystal structure of a zinc mediated dimer for the phenanthroline-modified cytochrome cb562 variant, MBP-Phen2 2010-06-22 2010-11-24 Radford, R.J.,Lawrenz, M.,Nguyen, P.C.,McCammon, J.A.,Tezcan, F.A. Porous protein frameworks with unsaturated metal centers in sterically encumbered coordination sites. Chem.Commun.(Camb.) 2011 47 313 315 3OUH 24900242 PHD2-R127 with JNJ41536014 2010-09-14 2010-12-01 Rosen, M.D.,Venkatesan, H.,Peltier, H.M.,Bembenek, S.D.,Kanelakis, K.C.,Zhao, L.X.,Leonard, B.E.,Hocutt, F.M.,Wu, X.,Palomino, H.L.,Brondstetter, T.I.,Haugh, P.V.,Cagnon, L.,Yan, W.,Liotta, L.A.,Young, A.,Mirzadegan, T.,Shankley, N.P.,Barrett, T.D.,Rabinowitz, M.H. Benzimidazole-2-pyrazole HIF Prolyl 4-Hydroxylase Inhibitors as Oral Erythropoietin Secretagogues. ACS Med Chem Lett 2010 1 526 529 3KL0 21256135 Crystal structure of the glucuronoxylan xylanohydrolase XynC from Bacillus subtilis 2009-11-06 2010-12-08 St John, F.J.,Hurlbert, J.C.,Rice, J.D.,Preston, J.F.,Pozharski, E. Ligand bound structures of a glycosyl hydrolase family 30 glucuronoxylan xylanohydrolase. J.Mol.Biol. 2011 407 92 109 3PM0 21147782 Structural Characterization of the Complex between Alpha-Naphthoflavone and Human Cytochrome P450 1B1 (CYP1B1) 2010-11-15 2010-12-08 Wang, A.,Savas, U.,Stout, C.D.,Johnson, E.F. Structural Characterization of the Complex between {alpha}-Naphthoflavone and Human Cytochrome P450 1B1. J.Biol.Chem. 2011 286 5736 5743 3M4C 20721993 A Zn-mediated tetrahedral protein lattice cage encapsulating a microperoxidase 2010-03-10 2011-01-12 Ni, T.W.,Tezcan, F.A. Structural characterization of a microperoxidase inside a metal-directed protein cage. Angew.Chem.Int.Ed.Engl. 2010 49 7014 7018 3NLT 20843082 Structure of endothelial nitric oxide synthase heme domain complexed with N1-{(3'S,4'S)-4'-[(6""-amino-4""-methylpyridin-2""-yl)methyl]pyrrolidin-3'-yl}- N2-(3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride 2010-06-21 2011-01-19 Xue, F.,Li, H.,Delker, S.L.,Fang, J.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Potent, highly selective, and orally bioavailable gem-difluorinated monocationic inhibitors of neuronal nitric oxide synthase. J.Am.Chem.Soc. 2010 132 14229 14238 3NLU 20843082 Structure of endothelial nitric oxide synthase heme domain complexed with N1-{(3'R,4'R)-4'-[(6""-amino-4""-methylpyridin-2""-yl)methyl]pyrrolidin-3'-yl}-N2-(3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride 2010-06-21 2011-01-19 Xue, F.,Li, H.,Delker, S.L.,Fang, J.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Potent, highly selective, and orally bioavailable gem-difluorinated monocationic inhibitors of neuronal nitric oxide synthase. J.Am.Chem.Soc. 2010 132 14229 14238 3NLV 20843082 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(((3S,4S)-4-(2-(2,2-Difluoro-2-(3-fluorophenyl)ethylamino)ethoxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2010-06-21 2011-01-19 Xue, F.,Li, H.,Delker, S.L.,Fang, J.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Potent, highly selective, and orally bioavailable gem-difluorinated monocationic inhibitors of neuronal nitric oxide synthase. J.Am.Chem.Soc. 2010 132 14229 14238 3NLW 20843082 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(((3S,4S)-4-(2-(2,2-Difluoro-2-(piperidin-2-yl)ethylamino)ethoxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2010-06-21 2011-01-19 Xue, F.,Li, H.,Delker, S.L.,Fang, J.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Potent, highly selective, and orally bioavailable gem-difluorinated monocationic inhibitors of neuronal nitric oxide synthase. J.Am.Chem.Soc. 2010 132 14229 14238 3N5P 21138269 Structure of endothelial nitric oxide synthase heme domain complexed with 4-(2-(6-(2-(6-amino-4-methylpyridin-2-yl)ethyl)pyridin-2-yl)ethyl)-6-methylpyridin-2-amine 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N5Q 21138269 Structure of endothelial nitric oxide synthase heme domain complexed with 6,6'-(2,2'-(5-amino-1,3-phenylene)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N5R 21138269 Structure of endothelial nitric oxide synthase heme domain complexed with 4-(3-(2-(6-amino-4-methylpyridin-2-yl)ethyl)phenethyl)-6-methylpyridin-2-amine 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N5T 21138269 Structure of endothelial nitric oxide synthase heme domain complexed with 6,6'-(2,2'-(pyridine-3,5-diyl)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N5V 21138269 Structure of neuronal nitric oxide synthase heme domain in complex with 4-(3-(2-(6-amino-4-methylpyridin-2-yl)ethyl)phenethyl)-6-methylpyridin-2-amine 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N5W 21138269 Structure of neuronal nitric oxide synthase heme domain in complex with 6,6'-(2,2'-(pyridine-3,5-diyl)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N5X 21138269 Structure of neuronal nitric oxide synthase heme domain in complex with 4-(2-(5-(2-(6-amino-4-methylpyridin-2-yl)ethyl)pyridin-3-yl)ethyl)-6-methylpyridin-2-amine 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N5Y 21138269 Structure of neuronal nitric oxide synthase heme domain in complex with 6,6'-(2,2'-(pyridine-2,6-diyl)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N5Z 21138269 Structure of neuronal nitric oxide synthase heme domain in complex with 4-(2-(6-(2-(6-amino-4-methylpyridin-2-yl)ethyl)pyridin-2-yl)ethyl)-6-methylpyridin-2-amine 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N61 21138269 Structure of neuronal nitric oxide synthase D597N/M336V mutant heme domain in complex with 6,6'-(2,2'-(pyridine-3,5-diyl)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N62 21138269 Structure of neuronal nitric oxide synthase D597N mutant heme domain in complex with 6,6'-(2,2'-(pyridine-3,5-diyl)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N63 21138269 Structure of neuronal nitric oxide synthase D597N/M336V mutant heme domain in complex with 6,6'-(2,2'-(5-amino-1,3-phenylene)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N64 21138269 Structure of neuronal nitric oxide synthase D597N mutant heme domain in complex with 6,6'-(2,2'-(5-amino-1,3-phenylene)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N65 21138269 Structure of neuronal nitric oxide synthase S602H mutant heme domain in complex with 6,6'-(2,2'-(pyridine-3,5-diyl)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N66 21138269 Structure of neuronal nitric oxide synthase S602H mutant heme domain in complex with 6,6'-(2,2'-(5-amino-1,3-phenylene)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N67 21138269 Structure of endothelial nitric oxide synthase N368D/V106M double mutant heme domain complexed with 6,6'-(2,2'-(5-amino-1,3-phenylene)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N68 21138269 Structure of endothelial nitric oxide synthase heme domain N368D/V106M double mutant complexed with 4-(3-(2-(6-amino-4-methylpyridin-2-yl)ethyl)phenethyl)-6-methylpyridin-2-amine 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N69 21138269 Structure of endothelial nitric oxide synthase N368D/V106M double mutant heme domain complexed with 6,6'-(2,2'-(pyridine-3,5-diyl)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N6A 21138269 Structure of endothelial nitric oxide synthase N368D/V106M double mutant heme domain complexed with 4-(2-(5-(2-(6-amino-4-methylpyridin-2-yl)ethyl)pyridin-3-yl)ethyl)-6-methylpyridin-2-amine 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N6E 21138269 Structure of endothelial nitric oxide synthase N368D mutant heme domain complexed with 6,6'-(2,2'-(5-amino-1,3-phenylene)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N6F 21138269 Structure of endothelial nitric oxide synthase N368D single mutant heme domain complexed with 6,6'-(2,2'-(pyridine-3,5-diyl)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3N6G 21138269 Structure of endothelial nitric oxide synthase N368D single mutant heme domain complexed with 4-(2-(5-(2-(6-amino-4-methylpyridin-2-yl)ethyl)pyridin-3-yl)ethyl)-6-methylpyridin-2-amine 2010-05-25 2011-02-09 Delker, S.L.,Xue, F.,Li, H.,Jamal, J.,Silverman, R.B.,Poulos, T.L. Role of zinc in isoform-selective inhibitor binding to neuronal nitric oxide synthase . Biochemistry 2010 49 10803 10810 3NIA GES-2 carbapenemase tazobactam complex 2010-06-15 2011-03-02 Frase, H.,Smith, C.A.,Toth, M.,Champion, M.M.,Mobashery, S.,Vakulenko, S.B. Inhibition of the GES-2 beta-Lactamse by Tazobactam: Detection of Reaction Intermediates by UV and Mass Spectrometry and X-Ray Crystallography To be Published 0 0 0 0 3MA7 21389252 Crystal structure of Cardiolipin bound to mouse CD1D 2010-03-23 2011-03-16 Dieude, M.,Striegl, H.,Tyznik, A.J.,Wang, J.,Behar, S.M.,Piccirillo, C.A.,Levine, J.S.,Zajonc, D.M.,Rauch, J. Cardiolipin Binds to CD1d and Stimulates CD1d-Restricted {gamma}{delta} T Cells in the Normal Murine Repertoire. J.Immunol. 2011 186 4771 4781 3P6C 25664790 Human adipocyte lipid-binding protein FABP4 in complex with citric acid 2010-10-11 2011-04-13 Gonzalez, J.M.,Fisher, S.Z. Structural analysis of ibuprofen binding to human adipocyte fatty-acid binding protein (FABP4). Acta Crystallogr F Struct Biol 2015 71 163 170 3P6D 25664790 Human adipocyte lipid-binding protein FABP4 in complex with 3-(4-methoxy-3-methylphenyl) propionic acid 2010-10-11 2011-04-13 Gonzalez, J.M.,Fisher, S.Z. Structural analysis of ibuprofen binding to human adipocyte fatty-acid binding protein (FABP4). Acta Crystallogr F Struct Biol 2015 71 163 170 3P6E 25664790 Human adipocyte lipid-binding protein FABP4 in complex with 3-(4-methoxyphenyl) propionic acid 2010-10-11 2011-04-13 Gonzalez, J.M.,Fisher, S.Z. Structural analysis of ibuprofen binding to human adipocyte fatty-acid binding protein (FABP4). Acta Crystallogr F Struct Biol 2015 71 163 170 3P6F 25664790 Human adipocyte lipid-binding protein FABP4 in complex with (S)-3-phenyl butyric acid 2010-10-11 2011-04-13 Gonzalez, J.M.,Fisher, S.Z. Structural analysis of ibuprofen binding to human adipocyte fatty-acid binding protein (FABP4). Acta Crystallogr F Struct Biol 2015 71 163 170 3P6G 25664790 Human adipocyte lipid-binding protein FABP4 in complex with (R)-ibuprofen 2010-10-11 2011-04-13 Gonzalez, J.M.,Fisher, S.Z. Structural analysis of ibuprofen binding to human adipocyte fatty-acid binding protein (FABP4). Acta Crystallogr F Struct Biol 2015 71 163 170 3P6H 25664790 Human adipocyte lipid-binding protein FABP4 in complex with (S)-ibuprofen 2010-10-11 2011-04-13 Gonzalez, J.M.,Fisher, S.Z. Structural analysis of ibuprofen binding to human adipocyte fatty-acid binding protein (FABP4). Acta Crystallogr F Struct Biol 2015 71 163 170 3POM 21491492 Crystal Structure of the Unliganded Retinoblastoma Protein Pocket Domain 2010-11-23 2011-04-27 Balog, E.R.,Burke, J.R.,Hura, G.L.,Rubin, S.M. Crystal structure of the unliganded retinoblastoma protein pocket domain. Proteins 2011 79 2010 2014 3QNS 21534572 DyPB from Rhodococcus jostii RHA1, crystal form 2 2011-02-09 2011-04-27 Roberts, J.N.,Singh, R.,Grigg, J.C.,Murphy, M.E.,Bugg, T.D.,Eltis, L.D. Characterization of dye-decolorizing peroxidases from Rhodococcus jostii RHA1. Biochemistry 2011 50 5108 5119 3MPW 20851901 Structure of EUTM in 2-D protein membrane 2010-04-27 2011-05-11 Takenoya, M.,Nikolakakis, K.,Sagermann, M. Crystallographic insights into the pore structures and mechanisms of the EutL and EutM shell proteins of the ethanolamine-utilizing microcompartment of Escherichia coli. J.Bacteriol. 2010 192 6056 6063 3RIV 21566139 The Crystal Structure of Leishmania major Peroxidase 2011-04-14 2011-05-11 Jasion, V.S.,Polanco, J.A.,Meharenna, Y.T.,Li, H.,Poulos, T.L. Crystal Structure of Leishmania major Peroxidase and Characterization of the Compound I Tryptophan Radical. J.Biol.Chem. 2011 286 24608 24615 3RIW 21566139 The Crystal Structure of Leishmania major Peroxidase mutant C197T 2011-04-14 2011-05-11 Jasion, V.S.,Polanco, J.A.,Meharenna, Y.T.,Li, H.,Poulos, T.L. Crystal Structure of Leishmania major Peroxidase and Characterization of the Compound I Tryptophan Radical. J.Biol.Chem. 2011 286 24608 24615 3NRQ 21596746 Crystal structure of copper-reconstituted FetP from uropathogenic Escherichia coli strain F11 2010-06-30 2011-05-18 Koch, D.,Chan, A.C.,Murphy, M.E.,Lilie, H.,Grass, G.,Nies, D.H. Characterization of a Dipartite Iron Uptake System from Uropathogenic Escherichia coli Strain F11. J.Biol.Chem. 2011 286 25317 25330 3Q99 21534614 Structure of neuronal nitric oxide synthase in the ferric state in complex with N~5~-[(3-(ethylsulfanyl)propanimidoyl]-L-ornithine 2011-01-07 2011-05-18 Doukov, T.,Li, H.,Sharma, A.,Martell, J.D.,Soltis, S.M.,Silverman, R.B.,Poulos, T.L. Temperature-dependent spin crossover in neuronal nitric oxide synthase bound with the heme-coordinating thioether inhibitors. J.Am.Chem.Soc. 2011 133 8326 8334 3MZQ 22477781 RNase crystals grown by the hanging drop method 2010-05-12 2011-05-25 Berger, M.A.,Decker, J.H.,Mathews, I.I. Diffraction study of protein crystals grown in cryoloops and micromounts. J.Appl.Crystallogr. 2010 43 1513 1518 3N03 22477781 Thaumatin crystals grown from drops 2010-05-13 2011-05-25 Berger, M.A.,Decker, J.H.,Mathews, I.I. Diffraction study of protein crystals grown in cryoloops and micromounts. J.Appl.Crystallogr. 2010 43 1513 1518 3N0C 22477781 TM0449 mutant crystal grown by hanging drop method 2010-05-13 2011-05-25 Berger, M.A.,Decker, J.H.,Mathews, I.I. Diffraction study of protein crystals grown in cryoloops and micromounts. J.Appl.Crystallogr. 2010 43 1513 1518 3LPQ 21636891 Human MitoNEET with 2Fe-2S Coordinating Ligand His 87 Replaced With Cys 2010-02-05 2011-06-01 Conlan, A.R.,Paddock, M.L.,Homer, C.,Axelrod, H.L.,Cohen, A.E.,Abresch, E.C.,Zuris, J.A.,Nechushtai, R.,Jennings, P.A. Mutation of the His ligand in mitoNEET stabilizes the 2Fe-2S cluster despite conformational heterogeneity in the ligand environment. Acta Crystallogr.,Sect.D 2011 67 516 523 3S5P Crystal structure of ribose-5-phosphate isomerase B RpiB from Giardia lamblia 2011-05-23 2011-06-01 Edwards, T.E.,Abendroth, J.,Seattle Structural Genomics Center for Infectious Disease (SSGCID) Crystal structure of ribose-5-phosphate isomerase B RpiB from Giardia lamblia To be Published 0 0 0 0 3R1G 21613622 Structure Basis of Allosteric Inhibition of BACE1 by an Exosite-Binding Antibody 2011-03-10 2011-06-08 Atwal, J.K.,Chen, Y.,Chiu, C.,Mortensen, D.L.,Meilandt, W.J.,Liu, Y.,Heise, C.E.,Hoyte, K.,Luk, W.,Lu, Y.,Peng, K.,Wu, P.,Rouge, L.,Zhang, Y.,Lazarus, R.A.,Scearce-Levie, K.,Wang, W.,Wu, Y.,Tessier-Lavigne, M.,Watts, R.J. A Therapeutic Antibody Targeting BACE1 Inhibits Amyloid-{beta} Production in Vivo. Sci Transl Med 2011 3 0 0 3SDS 21904041 Crystal structure of a mitochondrial ornithine carbamoyltransferase from Coccidioides immitis 2011-06-09 2011-06-22 Hewitt, S.N.,Choi, R.,Kelley, A.,Crowther, G.J.,Napuli, A.J.,Van Voorhis, W.C. Expression of proteins in Escherichia coli as fusions with maltose-binding protein to rescue non-expressed targets in a high-throughput protein-expression and purification pipeline. Acta Crystallogr.,Sect.F 2011 67 1006 1009 3QUY 21552205 Structure of the mouse CD1d-BnNH-GSL-1'-iNKT TCR complex 2011-02-24 2011-06-29 Aspeslagh, S.,Li, Y.,Yu, E.D.,Pauwels, N.,Trappeniers, M.,Girardi, E.,Decruy, T.,Van Beneden, K.,Venken, K.,Drennan, M.,Leybaert, L.,Wang, J.,Franck, R.W.,Van Calenbergh, S.,Zajonc, D.M.,Elewaut, D. Galactose-modified iNKT cell agonists stabilized by an induced fit of CD1d prevent tumour metastasis. Embo J. 2011 30 2294 2305 3S4M 21671584 Crystal structure of wild-type human frataxin 2011-05-19 2011-06-29 Tsai, C.L.,Bridwell-Rabb, J.,Barondeau, D.P. Friedreich's Ataxia Variants I154F and W155R Diminish Frataxin-Based Activation of the Iron-Sulfur Cluster Assembly Complex. Biochemistry 2011 50 6478 6487 3S5E 21671584 Crystal structure of human frataxin variant W155R, one of the Friedreich's ataxia point mutations 2011-05-23 2011-06-29 Tsai, C.L.,Bridwell-Rabb, J.,Barondeau, D.P. Friedreich's Ataxia Variants I154F and W155R Diminish Frataxin-Based Activation of the Iron-Sulfur Cluster Assembly Complex. Biochemistry 2011 50 6478 6487 3S5F 21671584 Crystal structure of human frataxin variant W155F 2011-05-23 2011-06-29 Tsai, C.L.,Bridwell-Rabb, J.,Barondeau, D.P. Friedreich's Ataxia Variants I154F and W155R Diminish Frataxin-Based Activation of the Iron-Sulfur Cluster Assembly Complex. Biochemistry 2011 50 6478 6487 3QGP Crystal structure of IsdI in complex with heme and cyanide 2011-01-24 2011-07-20 Takayama, S.J.,Ukpabi, G.N.,Murphy, M.E.P.,Mauk, A.G. Heme Ruffling Enables the Catalytic Activity of the Heme Degrading Enzyme IsdI To be Published 0 0 0 0 3T3K 21776984 1.24 A Structure of Friedreich's ataxia frataxin variant Q148R 2011-07-25 2011-08-10 Bridwell-Rabb, J.,Winn, A.M.,Barondeau, D.P. Structure-Function Analysis of Friedreich's Ataxia Mutants Reveals Determinants of Frataxin Binding and Activation of the Fe-S Assembly Complex. Biochemistry 2011 50 7265 7274 3T3L 21776984 1.15 A structure of human frataxin variant Q153A 2011-07-25 2011-08-10 Bridwell-Rabb, J.,Winn, A.M.,Barondeau, D.P. Structure-Function Analysis of Friedreich's Ataxia Mutants Reveals Determinants of Frataxin Binding and Activation of the Fe-S Assembly Complex. Biochemistry 2011 50 7265 7274 3RZC 21810611 Structure of the self-antigen iGb3 bound to mouse CD1d and in complex with the iNKT TCR 2011-05-11 2011-08-24 Yu, E.D.,Girardi, E.,Wang, J.,Zajonc, D.M. Cutting Edge: Structural Basis for the Recognition of {beta}-Linked Glycolipid Antigens by Invariant NKT Cells. J.Immunol. 2011 187 2079 2083 3QZL 21893067 Staphylococcus aureus IsdA NEAT domain K75A variant in complex with heme 2011-03-06 2011-08-31 Grigg, J.C.,Mao, C.X.,Murphy, M.E. Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer. J.Mol.Biol. 2011 413 684 698 3QZM 21893067 Staphylococcus aureus IsdA NEAT domain H83A variant in complex with heme 2011-03-06 2011-08-31 Grigg, J.C.,Mao, C.X.,Murphy, M.E. Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer. J.Mol.Biol. 2011 413 684 698 3P0E 21855639 Structure of hUPP2 in an active conformation with bound 5-benzylacyclouridine 2010-09-28 2011-09-07 Roosild, T.P.,Castronovo, S.,Villoso, A.,Ziemba, A.,Pizzorno, G. A novel structural mechanism for redox regulation of uridine phosphorylase 2 activity. J.Struct.Biol. 2011 176 229 237 3P0F 21855639 Structure of hUPP2 in an inactive conformation with bound 5-benzylacyclouridine 2010-09-28 2011-09-07 Roosild, T.P.,Castronovo, S.,Villoso, A.,Ziemba, A.,Pizzorno, G. A novel structural mechanism for redox regulation of uridine phosphorylase 2 activity. J.Struct.Biol. 2011 176 229 237 3TFZ 21870821 Crystal structure of Zhui aromatase/cyclase from Streptomcyes sp. R1128 2011-08-16 2011-09-14 Ames, B.D.,Lee, M.Y.,Moody, C.,Zhang, W.,Tang, Y.,Tsai, S.C. Structural and Biochemical Characterization of ZhuI Aromatase/Cyclase from the R1128 Polyketide Pathway. Biochemistry 2011 50 8392 8406 3SOB 21944579 The structure of the first YWTD beta propeller domain of LRP6 in complex with a FAB 2011-06-30 2011-09-21 Bourhis, E.,Wang, W.,Tam, C.,Hwang, J.,Zhang, Y.,Spittler, D.,Huang, O.W.,Gong, Y.,Estevez, A.,Zilberleyb, I.,Rouge, L.,Chiu, C.,Wu, Y.,Costa, M.,Hannoush, R.N.,Franke, Y.,Cochran, A.G. Wnt antagonists bind through a short peptide to the first beta-propeller domain of LRP5/6. Structure 2011 19 1433 1442 3T1F 21892173 Crystal structure of the mouse CD1d-Glc-DAG-s2 complex 2011-07-21 2011-09-21 Kinjo, Y.,Illarionov, P.,Vela, J.L.,Pei, B.,Girardi, E.,Li, X.,Li, Y.,Imamura, M.,Kaneko, Y.,Okawara, A.,Miyazaki, Y.,Gomez-Velasco, A.,Rogers, P.,Dahesh, S.,Uchiyama, S.,Khurana, A.,Kawahara, K.,Yesilkaya, H.,Andrew, P.W.,Wong, C.H.,Kawakami, K.,Nizet, V.,Besra, G.S.,Tsuji, M.,Zajonc, D.M.,Kronenberg, M. Invariant natural killer T cells recognize glycolipids from pathogenic Gram-positive bacteria. Nat.Immunol. 2011 12 966 974 3SVP 21809851 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(((3R,4R)-4-(2-((2,2-Difluoro-2-(3-chloro-5-fluorophenyl)ethyl)amino)ethoxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2011-07-12 2011-09-28 Xue, F.,Kraus, J.M.,Labby, K.J.,Ji, H.,Mataka, J.,Xia, G.,Li, H.,Delker, S.L.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Improved Synthesis of Chiral Pyrrolidine Inhibitors and Their Binding Properties to Neuronal Nitric Oxide Synthase. J.Med.Chem. 2011 54 6399 6403 3SVQ 21809851 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(((3R,4R)-4-(2-((2,2-Difluoro-2-(2,3-difluorophenyl)ethyl)amino)ethoxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2011-07-12 2011-09-28 Xue, F.,Kraus, J.M.,Labby, K.J.,Ji, H.,Mataka, J.,Xia, G.,Li, H.,Delker, S.L.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Improved Synthesis of Chiral Pyrrolidine Inhibitors and Their Binding Properties to Neuronal Nitric Oxide Synthase. J.Med.Chem. 2011 54 6399 6403 3PNH 21809851 Structure of Bovine Endothelial Nitric Oxide Synthase Heme Domain in complex with 6-(((3R,4R)-4-(2-((2-FLUORO-2-(3-FLUOROPHENYL) ETHYL)AMINO)ETHOXY)PYRROLIDIN-3-YL)METHYL)-4-METHYLPYRIDIN-2-AMINE 2010-11-18 2011-10-05 Xue, F.,Kraus, J.M.,Labby, K.J.,Ji, H.,Mataka, J.,Xia, G.,Li, H.,Delker, S.L.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Improved Synthesis of Chiral Pyrrolidine Inhibitors and Their Binding Properties to Neuronal Nitric Oxide Synthase. J.Med.Chem. 2011 54 6399 6403 3TV6 24900315 Human B-Raf Kinase Domain in Complex with a Methoxypyrazolopyridinyl Benzamide Inhibitor 2011-09-19 2011-10-05 Wenglowsky, S.,Ren, L.,Ahrendt, K.A.,Laird, E.R.,Aliagas, I.,Alicke, B.,Buckmelter, A.J.,Choo, E.F.,Dinkel, V.,Feng, B.,Gloor, S.L.,Gould, S.E.,Gross, S.,Gunzner-Toste, J.,Hansen, J.D.,Hatzivassiliou, G.,Liu, B.,Malesky, K.,Mathieu, S.,Newhouse, B.,Raddatz, N.J.,Ran, Y.,Rana, S.,Randolph, N.,Risom, T.,Rudolph, J.,Savage, S.,Selby, L.T.,Shrag, M.,Song, K.,Sturgis, H.L.,Voegtli, W.C.,Wen, Z.,Willis, B.S.,Woessner, R.D.,Wu, W.I.,Young, W.B.,Grina, J. Pyrazolopyridine Inhibitors of B-Raf(V600E). Part 1: The Development of Selective, Orally Bioavailable, and Efficacious Inhibitors. ACS Med Chem Lett 2011 2 342 347 3UBX 22110136 Crystal structure of the mouse CD1d-C20:2-aGalCer-L363 mAb Fab complex 2011-10-25 2011-11-16 Yu, E.D.,Girardi, E.,Wang, J.,Mac, T.T.,Yu, K.O.,Van Calenbergh, S.,Porcelli, S.A.,Zajonc, D.M. Structural basis for the recognition of C20:2-alpha GalCer by the invariant natural killer T cell receptor-like antibody L363. J.Biol.Chem. 2012 287 1269 1278 3TA3 22069376 Structure of the mouse CD1d-Glc-DAG-s2-iNKT TCR complex 2011-08-03 2011-11-23 Girardi, E.,Yu, E.D.,Li, Y.,Tarumoto, N.,Pei, B.,Wang, J.,Illarionov, P.,Kinjo, Y.,Kronenberg, M.,Zajonc, D.M. Unique Interplay between Sugar and Lipid in Determining the Antigenic Potency of Bacterial Antigens for NKT Cells. Plos Biol. 2011 9 0 0 3UA1 22157006 Crystal structure of the cytochrome P4503A4-bromoergocryptine complex 2011-10-20 2011-12-14 Sevrioukova, I.F.,Poulos, T.L. Structural and Mechanistic Insights into the Interaction of Cytochrome P4503A4 with Bromoergocryptine, a Type I Ligand. J.Biol.Chem. 2012 287 3510 3517 3QMX 22155275 X-ray crystal structure of Synechocystis sp. PCC 6803 Glutaredoxin A 2011-02-05 2012-01-11 Kim, S.G.,Chung, J.S.,Sutton, R.B.,Lee, J.S.,Lopez-Maury, L.,Lee, S.Y.,Florencio, F.J.,Lin, T.,Zabet-Moghaddam, M.,Wood, M.J.,Nayak, K.,Madem, V.,Tripathy, J.N.,Kim, S.K.,Knaff, D.B. Redox, mutagenic and structural studies of the glutaredoxin/arsenate reductase couple from the cyanobacterium Synechocystis sp. PCC 6803. Biochim.Biophys.Acta 2011 1824 392 403 3QEG Crystal structure of human N12-i2 Fab, an ADCC and neutralizing anti-HIV-1 Env antibody 2011-01-20 2012-01-25 Guan, Y.,DeVico, A.L.,Lewis, G.K.,Pazgier, M. Crystal structure of human N12-i2 Fab, an ADCC and neutralizing anti-HIV-1 Env antibody To be Published 0 0 0 0 3QEH Crystal structure of human N12-i15, an ADCC and non-neutralizing anti-HIV-1 Env antibody 2011-01-20 2012-01-25 Guan, Y.,DeVico, A.L.,Lewis, G.K.,Pazgier, M. Crystal structure of human N12-i15, an ADCC and non-neutralizing anti-HIV-1 Env antibody To be Published 0 0 0 0 3QJV 22226917 The structure of and photolytic induced changes of carbon monoxide binding to the cytochrome ba3-oxidase from Thermus thermophilus 2011-01-30 2012-01-25 Liu, B.,Zhang, Y.,Sage, J.T.,Soltis, S.M.,Doukov, T.,Chen, Y.,Stout, C.D.,Fee, J.A. Structural changes that occur upon photolysis of the Fe(II)(a3)-CO complex in the cytochrome ba(3)-oxidase of Thermus thermophilus: A combined X-ray crystallographic and infrared spectral study demonstrates CO binding to Cu(B). Biochim.Biophys.Acta 2012 1817 658 665 3QB9 Mycobacterium tuberculosis bacterioferritin, BfrA 2011-01-12 2012-02-08 McMath, L.M.,Goulding, C.W. Mycobacterium tuberculosis bacterioferritin, BfrA To be Published 0 0 0 0 3QM4 22308038 Human Cytochrome P450 (CYP) 2D6 - Prinomastat Complex 2011-02-03 2012-02-15 Wang, A.,Savas, U.,Hsu, M.H.,Stout, C.D.,Johnson, E.F. Crystal Structure of Human Cytochrome P450 2D6 with Prinomastat Bound. J.Biol.Chem. 2012 287 10834 10843 3VBB 22353712 Crystal Structure of Seryl-tRNA Synthetase from Human at 2.9 angstroms 2012-01-02 2012-02-29 Xu, X.,Shi, Y.,Zhang, H.M.,Swindell, E.C.,Marshall, A.G.,Guo, M.,Kishi, S.,Yang, X.L. Unique domain appended to vertebrate tRNA synthetase is essential for vascular development. Nat Commun 2012 3 681 681 4DI5 Co-crystal structure of WT 5-epi-Aristolochene synthase from Nicotiana tobaccum with geraniline 2012-01-30 2012-02-29 Noel, J.P.,Starks, C.,Crenshaw, C.M. Co-crystal structure of WT 5-epi-Aristolochene synthase from Nicotiana tobaccum with geraniline To be Published 0 0 0 0 3RGA 22388816 Crystal structure of epoxide hydrolase for polyether lasalocid A biosynthesis 2011-04-08 2012-03-07 Hotta, K.,Chen, X.,Paton, R.S.,Minami, A.,Li, H.,Swaminathan, K.,Mathews, I.I.,Watanabe, K.,Oikawa, H.,Houk, K.N.,Kim, C.-Y. Enzymatic catalysis of anti-Baldwin ring closure in polyether biosynthesis Nature 2012 483 355 358 3TJS 22410611 Crystal Structure of the complex between human cytochrome P450 3A4 and desthiazolylmethyloxycarbonyl ritonavir 2011-08-24 2012-03-07 Sevrioukova, I.F.,Poulos, T.L. Interaction of human cytochrome P4503A4 with ritonavir analogs. Arch.Biochem.Biophys. 2012 520 108 116 3SXF 22369268 Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with Bumped Kinase Inhibitor, RM-1-89 2011-07-14 2012-03-14 Larson, E.T.,Ojo, K.K.,Murphy, R.C.,Johnson, S.M.,Zhang, Z.,Kim, J.E.,Leibly, D.J.,Fox, A.M.,Reid, M.C.,Dale, E.J.,Perera, B.G.,Kim, J.,Hewitt, S.N.,Hol, W.G.,Verlinde, C.L.,Fan, E.,Van Voorhis, W.C.,Maly, D.J.,Merritt, E.A. Multiple determinants for selective inhibition of apicomplexan calcium-dependent protein kinase CDPK1. J.Med.Chem. 2012 55 2803 2810 3T3V 22369268 Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with Bumped Kinase Inhibitor, RM-1-87 2011-07-25 2012-03-14 Larson, E.T.,Ojo, K.K.,Murphy, R.C.,Johnson, S.M.,Zhang, Z.,Kim, J.E.,Leibly, D.J.,Fox, A.M.,Reid, M.C.,Dale, E.J.,Perera, B.G.,Kim, J.,Hewitt, S.N.,Hol, W.G.,Verlinde, C.L.,Fan, E.,Van Voorhis, W.C.,Maly, D.J.,Merritt, E.A. Multiple determinants for selective inhibition of apicomplexan calcium-dependent protein kinase CDPK1. J.Med.Chem. 2012 55 2803 2810 3TYL 22370337 Structure of neuronal nitric oxide synthase heme domain in complex with 6-(((3S,4S)-4-(2-((2-fluorobenzyl)amino)ethoxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2011-09-26 2012-03-14 Labby, K.J.,Xue, F.,Kraus, J.M.,Ji, H.,Mataka, J.,Li, H.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Intramolecular hydrogen bonding: A potential strategy for more bioavailable inhibitors of neuronal nitric oxide synthase. Bioorg.Med.Chem. 2012 20 2435 2443 3TYM 22370337 Structure of neuronal nitric oxide synthase heme domain in complex with 6-(((3S,4S)-4-(2-((2-methoxybenzyl)amino)ethoxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2011-09-26 2012-03-14 Labby, K.J.,Xue, F.,Kraus, J.M.,Ji, H.,Mataka, J.,Li, H.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Intramolecular hydrogen bonding: A potential strategy for more bioavailable inhibitors of neuronal nitric oxide synthase. Bioorg.Med.Chem. 2012 20 2435 2443 3TYN 22370337 Structure of neuronal nitric oxide synthase heme domain in complex with 2-(((2-(((3S,4S)-4-((6-amino-4-methylpyridin-2-yl)methyl)pyrrolidin-3-yl)oxy)ethyl)amino)methyl)phenol 2011-09-26 2012-03-14 Labby, K.J.,Xue, F.,Kraus, J.M.,Ji, H.,Mataka, J.,Li, H.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Intramolecular hydrogen bonding: A potential strategy for more bioavailable inhibitors of neuronal nitric oxide synthase. Bioorg.Med.Chem. 2012 20 2435 2443 3TYO 22370337 Structure of neuronal nitric oxide synthase heme domain in complex with 6-(((3S,4S)-4-(2-((furan-2-ylmethyl)amino)ethoxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2011-09-26 2012-03-14 Labby, K.J.,Xue, F.,Kraus, J.M.,Ji, H.,Mataka, J.,Li, H.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Intramolecular hydrogen bonding: A potential strategy for more bioavailable inhibitors of neuronal nitric oxide synthase. Bioorg.Med.Chem. 2012 20 2435 2443 3UCR 22421438 Crystal structure of the immunoreceptor TIGIT IgV domain 2011-10-27 2012-03-14 Stengel, K.F.,Harden-Bowles, K.,Yu, X.,Rouge, L.,Yin, J.,Comps-Agrar, L.,Wiesmann, C.,Bazan, J.F.,Eaton, D.L.,Grogan, J.L. Structure of TIGIT immunoreceptor bound to poliovirus receptor reveals a cell-cell adhesion and signaling mechanism that requires cis-trans receptor clustering. Proc.Natl.Acad.Sci.USA 2012 109 5399 5404 3UCR 22421438 Crystal structure of the immunoreceptor TIGIT IgV domain 2011-10-27 2012-03-14 Stengel, K.F.,Harden-Bowles, K.,Yu, X.,Rouge, L.,Yin, J.,Comps-Agrar, L.,Wiesmann, C.,Bazan, J.F.,Eaton, D.L.,Grogan, J.L. Structure of TIGIT immunoreceptor bound to poliovirus receptor reveals a cell-cell adhesion and signaling mechanism that requires cis-trans receptor clustering. Proc.Natl.Acad.Sci.USA 2012 109 5399 5404 3TIF 22158619 Dimeric structure of a post-hydrolysis state of the ATP-binding cassette MJ0796 bound to ADP and Pi 2011-08-20 2012-03-21 Zoghbi, M.E.,Fuson, K.L.,Sutton, R.B.,Altenberg, G.A. Kinetics of the association/dissociation cycle of an ATP-binding cassette nucleotide-binding domain. J.Biol.Chem. 2012 287 4157 4164 3QOP Domain-domain flexibility leads to allostery within the camp receptor protein (CRP) 2011-02-10 2012-04-04 Knapp, J.,White, M.A.,Lee, J.C. Domain-Domain Flexibility Leads to Allostery within the Camp Receptor Protein (Crp) To be Published 0 0 0 0 3QSI 22451934 Nickel binding domain of NikR from Helicobacter pylori disclosing partial metal occupancy 2011-02-21 2012-04-04 West, A.L.,Evans, S.E.,Gonzalez, J.M.,Carter, L.G.,Tsuruta, H.,Pozharski, E.,Michel, S.L. Ni(II) coordination to mixed sites modulates DNA binding of HpNikR via a long-range effect. Proc.Natl.Acad.Sci.USA 2012 109 5633 5638 3SEQ 22280445 Crystal structure of C176A mutant of glutamine-dependent NAD+ synthetase from M. tuberculosis in complex with AMPCPP and NaAD+ 2011-06-10 2012-04-11 Chuenchor, W.,Doukov, T.I.,Resto, M.,Chang, A.,Gerratana, B. Regulation of the intersubunit ammonia tunnel in Mycobacterium tuberculosis glutamine-dependent NAD+ synthetase. Biochem.J. 2012 443 417 426 4DU0 22496447 Crystal structure of human alpha-defensin 1, HNP1 (G17A mutant) 2012-02-21 2012-04-11 Zhao, L.,Ericksen, B.,Wu, X.,Zhan, C.,Yuan, W.,Li, X.,Pazgier, M.,Lu, W. Invariant gly residue is important for alpha-defensin folding, dimerization, and function: a case study of the human neutrophil alpha-defensin HNP1 J.Biol.Chem. 2012 287 18900 18912 3VD0 22474346 structure of p73 DNA binding domain tetramer modulates p73 transactivation 2012-01-04 2012-04-18 Ethayathulla, A.S.,Tse, P.W.,Monti, P.,Nguyen, S.,Inga, A.,Fronza, G.,Viadiu, H. Structure of p73 DNA-binding domain tetramer modulates p73 transactivation. Proc.Natl.Acad.Sci.USA 2012 109 6066 6071 3VD1 22474346 structure of p73 DNA binding domain tetramer modulates p73 transactivation 2012-01-04 2012-04-18 Ethayathulla, A.S.,Tse, P.W.,Monti, P.,Nguyen, S.,Inga, A.,Fronza, G.,Viadiu, H. Structure of p73 DNA-binding domain tetramer modulates p73 transactivation. Proc.Natl.Acad.Sci.USA 2012 109 6066 6071 3VD2 22474346 structure of p73 DNA binding domain tetramer modulates p73 transactivation 2012-01-04 2012-04-18 Ethayathulla, A.S.,Tse, P.W.,Monti, P.,Nguyen, S.,Inga, A.,Fronza, G.,Viadiu, H. Structure of p73 DNA-binding domain tetramer modulates p73 transactivation. Proc.Natl.Acad.Sci.USA 2012 109 6066 6071 3RM1 1.24 Angstrom X-ray structure of bovine TRTK12-Ca(2+)-S100B D63N 2011-04-20 2012-04-25 Liriano, M.A.,Varney, K.M.,Inman, K.G.,Ishima, R.,Weber, D.J. The effects of CapZ peptide (TRTK12) on the protein dynamics of S100B and S100B D63N To be Published 0 0 0 0 3UFJ 22573813 Human Thymine DNA Glycosylase Bound to Substrate Analog 2'-fluoro-2'-deoxyuridine 2011-11-01 2012-04-25 Maiti, A.,Noon, M.S.,Mackerell, A.D.,Pozharski, E.,Drohat, A.C. Lesion processing by a repair enzyme is severely curtailed by residues needed to prevent aberrant activity on undamaged DNA. Proc.Natl.Acad.Sci.USA 2012 109 8091 8096 4DSN 22431598 Small-molecule ligands bind to a distinct pocket in Ras and inhibit SOS-mediated nucleotide exchange activity 2012-02-19 2012-04-25 Maurer, T.,Garrenton, L.S.,Oh, A.,Pitts, K.,Anderson, D.J.,Skelton, N.J.,Fauber, B.P.,Pan, B.,Malek, S.,Stokoe, D.,Ludlam, M.J.,Bowman, K.K.,Wu, J.,Giannetti, A.M.,Starovasnik, M.A.,Mellman, I.,Jackson, P.K.,Rudolph, J.,Wang, W.,Fang, G. Small-molecule ligands bind to a distinct pocket in Ras and inhibit SOS-mediated nucleotide exchange activity. Proc.Natl.Acad.Sci.USA 2012 109 5299 5304 3RQK 23352768 Structure of the neuronal nitric oxide synthase heme domain in complex with 4-methyl-6-{[(3R,4R)-4-(2-{[(1R,2S)-2-(3-methylphenyl)cyclopropyl]amino}ethoxy)pyrrolidin-3-yl]methyl}pyridin-2-amine and its isomer 2011-04-28 2012-05-02 Li, H.,Xue, F.,Kraus, J.M.,Ji, H.,Labby, K.J.,Mataka, J.,Delker, S.L.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Cyclopropyl- and methyl-containing inhibitors of neuronal nitric oxide synthase. Bioorg.Med.Chem. 2013 21 1333 1343 3RQM 23352768 Structure of the neuronal nitric oxide synthase heme domain in complex with 6-{[(3R,4R)-4-(2-{[(2R/2S)-1-(3-fluorophenyl)propan-2-yl]amino}ethoxy)pyrrolidin-3-yl]methyl}-4-methylpyridin-2-amine 2011-04-28 2012-05-02 Li, H.,Xue, F.,Kraus, J.M.,Ji, H.,Labby, K.J.,Mataka, J.,Delker, S.L.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Cyclopropyl- and methyl-containing inhibitors of neuronal nitric oxide synthase. Bioorg.Med.Chem. 2013 21 1333 1343 3RQO 23352768 Structure of the endothelial nitric oxide synthase heme domain in complex with 6-(((3R,4R)-4-(2-((1S,2R/1R,2S)-2-(3-Clorophenyl)cyclopropylamino)ethoxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2011-04-28 2012-05-02 Li, H.,Xue, F.,Kraus, J.M.,Ji, H.,Labby, K.J.,Mataka, J.,Delker, S.L.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Cyclopropyl- and methyl-containing inhibitors of neuronal nitric oxide synthase. Bioorg.Med.Chem. 2013 21 1333 1343 3RQP 23352768 Structure of the endothelial nitric oxide synthase heme domain in complex with 6-{[(3R,4R)-4-(2-{[(2R/2S)-1-(3-fluorophenyl)propan-2-yl]amino}ethoxy)pyrrolidin-3-yl]methyl}-4-methylpyridin-2-amine 2011-04-28 2012-05-02 Li, H.,Xue, F.,Kraus, J.M.,Ji, H.,Labby, K.J.,Mataka, J.,Delker, S.L.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Cyclopropyl- and methyl-containing inhibitors of neuronal nitric oxide synthase. Bioorg.Med.Chem. 2013 21 1333 1343 3RYP Domain-domain flexibility leads to allostery within the camp receptor protein (CRP) 2011-05-11 2012-05-02 Knapp, J.,White, M.A.,Lee, J.C. Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp) To be Published 0 0 0 0 4ANX 22548342 Complexes of PI3Kgamma with isoform selective inhibitors. 2012-03-22 2012-05-09 Leahy, J.W.,Buhr, C.A.,Johnson, H.W.B.,Kim, B.G.,Baik, T.,Cannoy, J.,Forsyth, T.P.,Jeong, J.W.,Lee, M.S.,Ma, S.,Noson, K.,Wang, L.,Williams, M.,Nuss, J.M.,Brooks, E.,Heald, N.,Holst, C.,Jaeger, C.,Lam, S.,Lougheed, J.C.,Nguyen, L.,Plonowski, A.,Stout, T.,Foster, P.G.,Wu, X.,Yakes, M.F.,Yu, R.,Zhang, W.,Lamb, P.,Raeber, O. The Discovery of a Novel Series of Potent and Orally Bioavailable Phosphoinositide 3-Kinase Gamma Inhibitors J.Med.Chem. 2012 55 5467 0 4E4X 22534450 Crystal Structure of B-Raf Kinase Domain in Complex with a Dihydropyrido[2,3-d]pyrimidinone-based Inhibitor 2012-03-13 2012-05-09 Ren, L.,Ahrendt, K.A.,Grina, J.,Laird, E.R.,Buckmelter, A.J.,Hansen, J.D.,Newhouse, B.,Moreno, D.,Wenglowsky, S.,Dinkel, V.,Gloor, S.L.,Hastings, G.,Rana, S.,Rasor, K.,Risom, T.,Sturgis, H.L.,Voegtli, W.C.,Mathieu, S. The discovery of potent and selective pyridopyrimidin-7-one based inhibitors of B-Raf(V600E) kinase. Bioorg.Med.Chem.Lett. 2012 22 3387 3391 4EYE 25613812 Crystal structure of a probable oxidoreductase from Mycobacterium abscessus solved by iodide ion SAD 2012-05-01 2012-05-09 Baugh, L.,Phan, I.,Begley, D.W.,Clifton, M.C.,Armour, B.,Dranow, D.M.,Taylor, B.M.,Muruthi, M.M.,Abendroth, J.,Fairman, J.W.,Fox, D.,Dieterich, S.H.,Staker, B.L.,Gardberg, A.S.,Choi, R.,Hewitt, S.N.,Napuli, A.J.,Myers, J.,Barrett, L.K.,Zhang, Y.,Ferrell, M.,Mundt, E.,Thompkins, K.,Tran, N.,Lyons-Abbott, S.,Abramov, A.,Sekar, A.,Serbzhinskiy, D.,Lorimer, D.,Buchko, G.W.,Stacy, R.,Stewart, L.J.,Edwards, T.E.,Van Voorhis, W.C.,Myler, P.J. Increasing the structural coverage of tuberculosis drug targets. Tuberculosis (Edinb) 2015 95 142 148 3RO8 23000703 Crystal structure of the catalytic domain of XynA1 from Paenibacillus sp. JDR-2 2011-04-25 2012-05-16 St John, F.J.,Preston, J.F.,Pozharski, E. Novel structural features of xylanase A1 from Paenibacillus sp. JDR-2. J.Struct.Biol. 2012 180 303 311 4DGR 22559154 Influenza Subtype 9 Neuraminidase Benzoic Acid Inhibitor Complex 2012-01-26 2012-05-16 Venkatramani, L.,Johnson, E.S.,Kolavi, G.,Air, G.M.,Brouillette, W.J.,Mooers, B.H. Crystal structure of a new benzoic acid inhibitor of influenza neuraminidase bound with a new tilt induced by overpacking sub-site C6. Bmc Struct.Biol. 2012 12 7 7 4E86 22573326 Crystal structure of human alpha-defensin 5, HD5 (Leu29Aba mutant) 2012-03-19 2012-05-16 Rajabi, M.,Ericksen, B.,Wu, X.,de Leeuw, E.,Zhao, L.,Pazgier, M.,Lu, W. Functional determinants of human enteric {alpha}-defensin HD5: crucial role for hydrophobicity at dimer interface. J.Biol.Chem. 2012 287 21615 21627 4F36 Crystal structure of Nucleoside diphosphate kinase B from Trypanosoma brucei, apo form 2012-05-08 2012-05-16 Seattle Structural Genomics Center for Infectious Disease (SSGCID),Gardberg, A.S.,Edwards, T.E.,Staker, B.,Stewart, L. Crystal structure of Nucleoside diphosphate kinase B from Trypanosoma brucei, apo form To be Published 0 0 0 0 4F3N 23382856 High resolution native crystal structure of an uncharacterized ACR, COG1565 superfamily protein from Burkholderia thailandensis, solved by iodide ion SAD 2012-05-09 2012-05-16 Baugh, L.,Gallagher, L.A.,Patrapuvich, R.,Clifton, M.C.,Gardberg, A.S.,Edwards, T.E.,Armour, B.,Begley, D.W.,Dieterich, S.H.,Dranow, D.M.,Abendroth, J.,Fairman, J.W.,Fox, D.,Staker, B.L.,Phan, I.,Gillespie, A.,Choi, R.,Nakazawa-Hewitt, S.,Nguyen, M.T.,Napuli, A.,Barrett, L.,Buchko, G.W.,Stacy, R.,Myler, P.J.,Stewart, L.J.,Manoil, C.,Van Voorhis, W.C. Combining functional and structural genomics to sample the essential Burkholderia structome. Plos One 2013 8 0 0 3S33 22607023 Structure of Thermus thermophilus cytochrome ba3 oxidase 10s after Xe depressurization 2011-05-17 2012-05-23 Luna, V.M.,Fee, J.A.,Deniz, A.A.,Stout, C.D. Mobility of Xe atoms within the oxygen diffusion channel of cytochrome ba(3) oxidase. Biochemistry 2012 51 4669 4676 3S38 22607023 Structure of Thermus thermophilus cytochrome ba3 oxidase 30s after Xe depressurization 2011-05-17 2012-05-23 Luna, V.M.,Fee, J.A.,Deniz, A.A.,Stout, C.D. Mobility of Xe atoms within the oxygen diffusion channel of cytochrome ba(3) oxidase. Biochemistry 2012 51 4669 4676 3S39 22607023 Structure of Thermus thermophilus cytochrome ba3 oxidase 60s after Xe depressurization 2011-05-17 2012-05-23 Luna, V.M.,Fee, J.A.,Deniz, A.A.,Stout, C.D. Mobility of Xe atoms within the oxygen diffusion channel of cytochrome ba(3) oxidase. Biochemistry 2012 51 4669 4676 4ELL 22569856 Structure of the inactive retinoblastoma protein pocket domain 2012-04-10 2012-05-23 Burke, J.R.,Hura, G.L.,Rubin, S.M. Structures of inactive retinoblastoma protein reveal multiple mechanisms for cell cycle control. Genes Dev. 2012 26 1156 1166 2YJZ 23733181 Rat STEAP4 oxidoreductase domain complexed with NADP 2011-05-24 2012-05-30 Gauss, G.H.,Kleven, M.D.,Sendamarai, A.K.,Fleming, M.D.,Lawrence, C.M. The Crystal Structure of Six-Transmembrane Epithelial Antigen of the Prostate 4 (Steap4), a Ferri/Cuprireductase, Suggests a Novel Interdomain Flavin-Binding Site. J.Biol.Chem. 2013 288 20668 0 4E43 20659109 HIV protease (PR) dimer with acetate in exo site and peptide in active site 2012-03-11 2012-05-30 Perryman, A.L.,Zhang, Q.,Soutter, H.H.,Rosenfeld, R.,McRee, D.E.,Olson, A.J.,Elder, J.E.,Stout, C.D. Fragment-based screen against HIV protease. Chem.Biol.Drug Des. 2010 75 257 268 4E4M 22591402 JAK2 kinase (JH1 domain) in complex with compound 30 2012-03-13 2012-05-30 Kulagowski, J.J.,Blair, W.,Bull, R.J.,Chang, C.,Deshmukh, G.,Dyke, H.J.,Eigenbrot, C.,Ghilardi, N.,Gibbons, P.,Harrison, T.K.,Hewitt, P.R.,Liimatta, M.,Hurley, C.A.,Johnson, A.,Johnson, T.,Kenny, J.R.,Bir Kohli, P.,Maxey, R.J.,Mendonca, R.,Mortara, K.,Murray, J.,Narukulla, R.,Shia, S.,Steffek, M.,Ubhayakar, S.,Ultsch, M.,van Abbema, A.,Ward, S.I.,Waszkowycz, B.,Zak, M. Identification of Imidazo-Pyrrolopyridines as Novel and Potent JAK1 Inhibitors. J.Med.Chem. 2012 55 5901 5921 4FA7 Structure of Recombinant Cytochrome ba3 Oxidase mutant A204F from Thermus thermophilus 2012-05-21 2012-05-30 0 0 0 0 4E9O 22623786 Vaccinia D8L ectodomain structure 2012-03-21 2012-06-06 Matho, M.H.,Maybeno, M.,Benhnia, M.R.,Becker, D.,Meng, X.,Xiang, Y.,Crotty, S.,Peters, B.,Zajonc, D.M. Structural and Biochemical Characterization of the Vaccinia Virus Envelope Protein D8 and Its Recognition by the Antibody LA5. J.Virol. 2012 86 8050 8058 4EBQ 22623786 Fab structure of anti-Vaccinia virus D8L antigen mouse IgG2a LA5 2012-03-23 2012-06-06 Matho, M.H.,Maybeno, M.,Benhnia, M.R.,Becker, D.,Meng, X.,Xiang, Y.,Crotty, S.,Peters, B.,Zajonc, D.M. Structural and Biochemical Characterization of the Vaccinia Virus Envelope Protein D8 and Its Recognition by the Antibody LA5. J.Virol. 2012 86 8050 8058 3TT0 21936542 Co-structure of Fibroblast Growth Factor Receptor 1 kinase domain with 3-(2,6-dichloro-3,5-dimethoxy-phenyl)-1-{6-[4-(4-ethyl-piperazin-1-yl)-phenylamino]-pyrimidin-4-yl}-1-methyl-urea (BGJ398) 2011-09-13 2012-06-13 Guagnano, V.,Furet, P.,Spanka, C.,Bordas, V.,Le Douget, M.,Stamm, C.,Brueggen, J.,Jensen, M.R.,Schnell, C.,Schmid, H.,Wartmann, M.,Berghausen, J.,Drueckes, P.,Zimmerlin, A.,Bussiere, D.,Murray, J.,Graus Porta, D. Discovery of 3-(2,6-dichloro-3,5-dimethoxy-phenyl)-1-{6-[4-(4-ethyl-piperazin-1-yl)-phenylamino]-pyrimidin-4-yl}-1-methyl-urea (NVP-BGJ398), a potent and selective inhibitor of the fibroblast growth factor receptor family of receptor tyrosine kinase. J.Med.Chem. 2011 54 7066 7083 3TPX 22694121 Crystal structure of human MDM2 in complex with a trifluoromethylated D-peptide inhibitor 2011-09-08 2012-06-20 Zhan, C.,Zhao, L.,Wei, X.,Wu, X.,Chen, X.,Yuan, W.,Lu, W.Y.,Pazgier, M.,Lu, W. An Ultrahigh Affinity d-Peptide Antagonist Of MDM2. J.Med.Chem. 2012 55 6237 6241 4EJF 22683611 Allosteric peptides that bind to a caspase zymogen and mediate caspase tetramerization 2012-04-06 2012-06-20 Stanger, K.,Steffek, M.,Zhou, L.,Pozniak, C.D.,Quan, C.,Franke, Y.,Tom, J.,Tam, C.,Elliott, J.M.,Lewcock, J.W.,Zhang, Y.,Murray, J.,Hannoush, R.N. Allosteric peptides bind a caspase zymogen and mediate caspase tetramerization. Nat.Chem.Biol. 2012 8 655 660 4FI5 Crystal structure of the N-terminal domain of Hantaan virus strain 76-118 nucleoprotein 2012-06-07 2012-06-20 Edwards, T.E.,Abendroth, J.,Altamura, L.,Seattle Structural Genomics Center for Infectious Disease (SSGCID) Crystal structure of the N-terminal domain of Hantaan virus strain 76-118 nucleoprotein TO BE PUBLISHED 0 0 0 0 3TOL 22522257 Crystal structure of an engineered cytochrome cb562 that forms 1D, Zn-mediated coordination polymers 2011-09-05 2012-07-04 Brodin, J.D.,Ambroggio, X.I.,Tang, C.,Parent, K.N.,Baker, T.S.,Tezcan, F.A. Metal-directed, chemically tunable assembly of one-, two- and three-dimensional crystalline protein arrays. Nat Chem 2012 4 375 382 4F09 22698084 Discovery and Optimization of C-2 Methyl Imidazo-pyrrolopyridines as Potent and Orally Bioavailable JAK1 Inhibitors with Selectivity over JAK2 2012-05-03 2012-07-04 Zak, M.,Mendonca, R.,Balazs, M.,Barrett, K.,Bergeron, P.,Blair, W.S.,Chang, C.,Deshmukh, G.,Devoss, J.,Dragovich, P.S.,Eigenbrot, C.,Ghilardi, N.,Gibbons, P.,Gradl, S.,Hamman, C.,Hanan, E.J.,Harstad, E.,Hewitt, P.R.,Hurley, C.A.,Jin, T.,Johnson, A.,Johnson, T.,Kenny, J.R.,Koehler, M.F.,Bir Kohli, P.,Kulagowski, J.J.,Labadie, S.,Liao, J.,Liimatta, M.,Lin, Z.,Lupardus, P.J.,Maxey, R.J.,Murray, J.M.,Pulk, R.,Rodriguez, M.,Savage, S.,Shia, S.,Steffek, M.,Ubhayakar, S.,Ultsch, M.,van Abbema, A.,Ward, S.I.,Xiao, L.,Xiao, Y. Discovery and Optimization of C-2 Methyl Imidazopyrrolopyridines as Potent and Orally Bioavailable JAK1 Inhibitors with Selectivity over JAK2. J.Med.Chem. 2012 55 6176 6193 3UFO 22731813 Structure of rat nitric oxide synthase heme domain in complex with 6-(((3S,4S)-4-((5-(3-fluorophenyl)pentyl)oxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2011-11-01 2012-07-11 Huang, H.,Ji, H.,Li, H.,Jing, Q.,Labby, K.J.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Selective monocationic inhibitors of neuronal nitric oxide synthase. Binding mode insights from molecular dynamics simulations. J.Am.Chem.Soc. 2012 134 11559 11572 3UFP 22731813 Structure of rat nitric oxide synthase heme domain in complex with 6-(((3R,4R)-4-((5-(3-fluorophenyl)pentyl)oxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2011-11-01 2012-07-11 Huang, H.,Ji, H.,Li, H.,Jing, Q.,Labby, K.J.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Selective monocationic inhibitors of neuronal nitric oxide synthase. Binding mode insights from molecular dynamics simulations. J.Am.Chem.Soc. 2012 134 11559 11572 3UFQ 22731813 Structure of rat nitric oxide synthase heme domain in complex with 6-(((3S,4S)-4-(((E)-5-(3-fluorophenyl)pent-4-en-1-yl)oxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2011-11-01 2012-07-11 Huang, H.,Ji, H.,Li, H.,Jing, Q.,Labby, K.J.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Selective monocationic inhibitors of neuronal nitric oxide synthase. Binding mode insights from molecular dynamics simulations. J.Am.Chem.Soc. 2012 134 11559 11572 3UFR 22731813 Structure of rat nitric oxide synthase heme domain in complex with 6-(((3R,4R)-4-(((E)-5-(3-fluorophenyl)pent-4-en-1-yl)oxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2011-11-01 2012-07-11 Huang, H.,Ji, H.,Li, H.,Jing, Q.,Labby, K.J.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Selective monocationic inhibitors of neuronal nitric oxide synthase. Binding mode insights from molecular dynamics simulations. J.Am.Chem.Soc. 2012 134 11559 11572 3UFS 22731813 Structure of rat nitric oxide synthase heme domain in complex with 6-(((3R,4R)-4-((5-(3-chloro-5-fluorophenyl)pentyl)oxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2011-11-01 2012-07-11 Huang, H.,Ji, H.,Li, H.,Jing, Q.,Labby, K.J.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Selective monocationic inhibitors of neuronal nitric oxide synthase. Binding mode insights from molecular dynamics simulations. J.Am.Chem.Soc. 2012 134 11559 11572 3UFT 22731813 Structure of rat nitric oxide synthase heme domain in complex with 6-(((3R,4R)-4-(4-(3-chloro-5-fluorophenoxy)butoxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2011-11-01 2012-07-11 Huang, H.,Ji, H.,Li, H.,Jing, Q.,Labby, K.J.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Selective monocationic inhibitors of neuronal nitric oxide synthase. Binding mode insights from molecular dynamics simulations. J.Am.Chem.Soc. 2012 134 11559 11572 3UFV 22731813 Structure of rat nitric oxide synthase heme domain in complex with 4-methyl-6-(((3R,4R)-4-((5-(4-methylpyridin-2-yl)pentyl)oxy)pyrrolidin-3-yl)methyl)pyridin-2-amine 2011-11-01 2012-07-11 Huang, H.,Ji, H.,Li, H.,Jing, Q.,Labby, K.J.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Selective monocationic inhibitors of neuronal nitric oxide synthase. Binding mode insights from molecular dynamics simulations. J.Am.Chem.Soc. 2012 134 11559 11572 3UFW 22731813 Structure of rat nitric oxide synthase heme domain in complex with 6-(((3R,4R)-4-((5-(6-aminopyridin-2-yl)pentyl)oxy)pyrrolidin-3-yl)methyl)-4-methylpyridin-2-amine 2011-11-01 2012-07-11 Huang, H.,Ji, H.,Li, H.,Jing, Q.,Labby, K.J.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Selective monocationic inhibitors of neuronal nitric oxide synthase. Binding mode insights from molecular dynamics simulations. J.Am.Chem.Soc. 2012 134 11559 11572 4EUX 22731813 Structure of neuronal nitric oxide synthase heme domain in complex with 6-(5-(((3R,4R)-4-((6-amino-4-methylpyridin-2-yl)methyl)pyrrolidin-3-yl)oxy)pentyl)-4-methylpyridin-2-amine 2012-04-25 2012-07-11 Huang, H.,Ji, H.,Li, H.,Jing, Q.,Labby, K.J.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Selective monocationic inhibitors of neuronal nitric oxide synthase. Binding mode insights from molecular dynamics simulations. J.Am.Chem.Soc. 2012 134 11559 11572 4EBW 22819505 Structure of Focal Adhesion Kinase catalytic domain in complex with novel allosteric inhibitor 2012-03-25 2012-07-25 Iwatani, M.,Iwata, H.,Okabe, A.,Skene, R.J.,Tomita, N.,Hayashi, Y.,Aramaki, Y.,Hosfield, D.J.,Hori, A.,Baba, A.,Miki, H. Discovery and characterization of novel allosteric FAK inhibitors. Eur.J.Med.Chem. 2013 61 49 60 4EK1 22826259 Crystal Structure of Electron-Spin Labeled Cytochrome P450cam 2012-04-08 2012-07-25 Stoll, S.,Lee, Y.T.,Zhang, M.,Wilson, R.F.,Britt, R.D.,Goodin, D.B. Double electron-electron resonance shows cytochrome P450cam undergoes a conformational change in solution upon binding substrate. Proc.Natl.Acad.Sci.USA 2012 109 12888 12893 4ELK 22820602 Crystal structure of the Hy19.3 type II NKT TCR 2012-04-10 2012-07-25 Girardi, E.,Maricic, I.,Wang, J.,Mac, T.T.,Iyer, P.,Kumar, V.,Zajonc, D.M. Type II natural killer T cells use features of both innate-like and conventional T cells to recognize sulfatide self antigens. Nat.Immunol. 2012 13 851 856 3UPM 22809162 Crystal Structure of PTE mutant H254Q/H257F/K185R/I274N 2011-11-18 2012-08-01 Tsai, P.C.,Fox, N.,Bigley, A.N.,Harvey, S.P.,Barondeau, D.P.,Raushel, F.M. Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents. Biochemistry 2012 51 6463 6475 3UR2 22809162 Crystal Structure of PTE mutant H254G/H257W/L303T/K185R/I274N/A80V 2011-11-21 2012-08-01 Tsai, P.C.,Fox, N.,Bigley, A.N.,Harvey, S.P.,Barondeau, D.P.,Raushel, F.M. Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents. Biochemistry 2012 51 6463 6475 3URN 22809162 Crystal Structure of PTE mutant H254G/H257W/L303T/K185R/I274N/A80V/S61T with cyclohexyl methylphosphonate inhibitor 2011-11-22 2012-08-01 Tsai, P.C.,Fox, N.,Bigley, A.N.,Harvey, S.P.,Barondeau, D.P.,Raushel, F.M. Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents. Biochemistry 2012 51 6463 6475 3URQ 22809162 Crystal Structure of PTE mutant H254G/H257W/L303T/M317L/I106C/F132I/L271I/K185R/I274N/A80V/R67H with cyclohexyl methylphosphonate inhibitor 2011-11-22 2012-08-01 Tsai, P.C.,Fox, N.,Bigley, A.N.,Harvey, S.P.,Barondeau, D.P.,Raushel, F.M. Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents. Biochemistry 2012 51 6463 6475 4G6C Crystal structure of beta-hexosaminidase 1 from Burkholderia cenocepacia J2315 2012-07-18 2012-08-01 Seattle Structural Genomics Center for Infectious Disease (SSGCID),Davies, D.R.,Abendroth, J.,Staker, B.,Stewart, L. Crystal structure of beta-hexosaminidase 1 from Burkholderia cenocepacia J2315 To be Published 0 0 0 0 3TBG 25555909 Human cytochrome P450 2D6 with two thioridazines bound in active site 2011-08-05 2012-08-08 Wang, A.,Stout, C.D.,Zhang, Q.,Johnson, E.F. Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding. J.Biol.Chem. 2015 290 5092 5104 3V5M 22438274 Crystal structure of M69V mutant of SHV beta-lactamase 2011-12-16 2012-08-08 Ke, W.,Rodkey, E.A.,Sampson, J.M.,Skalweit, M.J.,Sheri, A.,Pagadala, S.R.,Nottingham, M.D.,Buynak, J.D.,Bonomo, R.A.,van den Akker, F. The importance of the trans-enamine intermediate as a beta-lactamase inhibition strategy probed in inhibitor-resistant SHV beta-lactamase variants. Chemmedchem 2012 7 1002 1008 4G3G 22921830 Crystal structure of murine NF-kappaB inducing kinase (NIK) V408L bound to a 2-(aminothiazolyl)phenol (cmp3) 2012-07-13 2012-08-08 de Leon-Boenig, G.,Bowman, K.K.,Feng, J.A.,Crawford, T.,Everett, C.,Franke, Y.,Oh, A.,Stanley, M.,Staben, S.T.,Starovasnik, M.A.,Wallweber, H.J.,Wu, J.,Wu, L.C.,Johnson, A.R.,Hymowitz, S.G. The crystal structure of the catalytic domain of the NF-kappaB inducing kinase reveals a narrow but flexible active site. Structure 2012 20 1704 1714 4G3E 22921830 Crystal structure of murine NF-kappaB inducing kinase (NIK) bound to a 6-alkynylindoline (cmp1) 2012-07-13 2012-08-15 de Leon-Boenig, G.,Bowman, K.K.,Feng, J.A.,Crawford, T.,Everett, C.,Franke, Y.,Oh, A.,Stanley, M.,Staben, S.T.,Starovasnik, M.A.,Wallweber, H.J.,Wu, J.,Wu, L.C.,Johnson, A.R.,Hymowitz, S.G. The crystal structure of the catalytic domain of the NF-kappaB inducing kinase reveals a narrow but flexible active site. Structure 2012 20 1704 1714 3RGR Crystal structure of ketosteroid isomerase M116A from Pseudomonas putida 2011-04-08 2012-08-22 Gonzalez, A.,Tsai, Y.,Schwans, J.,Sunden, F.,Herschlag, D. Crystal structure of ketosteroid isomerase M116A from Pseudomonas putida To be Published 0 0 0 0 3TBJ 22216760 The 1.7A crystal structure of Actibind a T2 ribonucleases as antitumorigenic agents 2011-08-07 2012-08-22 de Leeuw, M.,Gonzalez, A.,Lanir, A.,Roiz, L.,Smirnoff, P.,Schwartz, B.,Shoseyov, O.,Almog, O. The 1.8 A crystal structure of ACTIBIND suggests a mode of action for T2 ribonucleases as antitumorigenic agents. J.Med.Chem. 2012 55 1013 1020 4ENH 22859721 Crystal Structure of Human Cytochrome P450 CYP46A1 with Fluvoxamine Bound 2012-04-13 2012-08-22 Mast, N.,Linger, M.,Clark, M.,Wiseman, J.,Stout, C.D.,Pikuleva, I.A. In Silico and Intuitive Predictions of CYP46A1 Inhibition by Marketed Drugs with Subsequent Enzyme Crystallization in Complex with Fluvoxamine. Mol.Pharmacol. 2012 82 824 834 4FQI 22878502 Crystal Structure of Fab CR9114 in Complex with a H5N1 influenza virus hemagglutinin 2012-06-25 2012-08-22 Dreyfus, C.,Laursen, N.S.,Kwaks, T.,Zuijdgeest, D.,Khayat, R.,Ekiert, D.C.,Lee, J.H.,Metlagel, Z.,Bujny, M.V.,Jongeneelen, M.,van der Vlugt, R.,Lamrani, M.,Korse, H.J.,Geelen, E.,Sahin, O.,Sieuwerts, M.,Brakenhoff, J.P.,Vogels, R.,Li, O.T.,Poon, L.L.,Peiris, M.,Koudstaal, W.,Ward, A.B.,Wilson, I.A.,Goudsmit, J.,Friesen, R.H. Highly conserved protective epitopes on influenza B viruses. Science 2012 337 1343 1348 4EOC Crystal structure of h74q Synechocystis sp. PCYA 2012-04-13 2012-08-29 Kabasakal, B.V.,Gae, D.D.,Fisher, A.J. Crystal structure of h74q Synechocystis sp. PCYA To be Published 0 0 0 0 4EOD Crystal structure of H74E synechocystis sp. pcya sp. PCYA 2012-04-13 2012-08-29 Kabasakal, B.V.,Gae, D.D.,Fisher, A.J. Crystal structure of H74E synechocystis sp. pcya sp. PCYA To be Published 0 0 0 0 3UA5 22909231 Crystal Structure of P450 2B6 (Y226H/K262R) in complex with two molecules of Amlodipine 2011-10-21 2012-09-12 Shah, M.B.,Wilderman, P.R.,Pascual, J.,Zhang, Q.,Stout, C.D.,Halpert, J.R. Conformational Adaptation of Human Cytochrome P450 2B6 and Rabbit Cytochrome P450 2B4 Revealed upon Binding Multiple Amlodipine Molecules. Biochemistry 2012 51 7225 7238 4GSB Monoclinic crystal form of the apo-ERK2 2012-08-27 2012-09-12 Zhang, J.,Pozharski, E.,Shapiro, P. Monoclinic crystal form of the apo-ERK2 TO BE PUBLISHED 0 0 0 0 3TNM 23237851 Crystal structure of A32 Fab, an ADCC mediating anti-HIV-1 antibody 2011-09-01 2012-09-26 Guan, Y.,Pazgier, M.,Sajadi, M.M.,Kamin-Lewis, R.,Al-Darmarki, S.,Flinko, R.,Lovo, E.,Wu, X.,Robinson, J.E.,Seaman, M.S.,Fouts, T.R.,Gallo, R.C.,DeVico, A.L.,Lewis, G.K. Diverse specificity and effector function among human antibodies to HIV-1 envelope glycoprotein epitopes exposed by CD4 binding. Proc.Natl.Acad.Sci.USA 2013 110 0 0 3TNN Crystal structure of N5-i5 Fab, an ADCC mediating and non-neutralizing CD4i anti-HIV- 1 antibody. 2011-09-01 2012-09-26 Guan, J.,Wu, X.,Pazgier, M.,Lewis, G. Crystal structure of N5-i5 Fab, an ADCC and non-neutralizing anti-HIV-1 antibody To be Published 0 0 0 0 4F7Z 23189173 Conformational dynamics of exchange protein directly activated by cAMP 2012-05-16 2012-10-03 White, M.A.,Li, S.,Tsalkova, T.,Mei, F.C.,Liu, T.,Woods, V.L.,Cheng, X. Structural analyses of a constitutively active mutant of exchange protein directly activated by cAMP. Plos One 2012 7 0 0 4DYC 22858866 Crystal Structure of the terminase small subunit gp1 with D19R mutation of the bacterial virus sf6 2012-02-28 2012-10-17 Zhao, H.,Kamau, Y.N.,Christensen, T.E.,Tang, L. Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity. J.Mol.Biol. 2012 423 413 426 4DYQ 22858866 High resolution crystal structure of terminase small subunit gp1 of the bacterial virus sf6 2012-02-29 2012-10-17 Zhao, H.,Kamau, Y.N.,Christensen, T.E.,Tang, L. Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity. J.Mol.Biol. 2012 423 413 426 4FDC 23217327 Crystal structure of the E493V mutant of human apoptosis inducing factor (AIF) 2012-05-27 2012-10-17 Rinaldi, C.,Grunseich, C.,Sevrioukova, I.F.,Schindler, A.,Horkayne-Szakaly, I.,Lamperti, C.,Landoure, G.,Kennerson, M.L.,Burnett, B.G.,Bonnemann, C.,Biesecker, L.G.,Ghezzi, D.,Zeviani, M.,Fischbeck, K.H. Cowchock syndrome is associated with a mutation in apoptosis-inducing factor. Am.J.Hum.Genet. 2012 91 1095 1102 4FAA Structure of Recombinant Cytochrome ba3 Oxidase mutant A120F+A204F from Thermus thermophilus 2012-05-21 2012-10-31 0 0 0 0 4E12 23073461 Substrate-directed dual catalysis of dicarbonyl compounds by diketoreductase 2012-03-05 2012-11-14 Lu, M.,Huang, Y.,White, M.A.,Wu, X.,Liu, N.,Cheng, X.,Chen, Y. Dual catalysis mode for the dicarbonyl reduction catalyzed by diketoreductase Chem.Commun.(Camb.) 2012 48 11352 11354 4E12 23073461 Substrate-directed dual catalysis of dicarbonyl compounds by diketoreductase 2012-03-05 2012-11-14 Lu, M.,Huang, Y.,White, M.A.,Wu, X.,Liu, N.,Cheng, X.,Chen, Y. Dual catalysis mode for the dicarbonyl reduction catalyzed by diketoreductase Chem.Commun.(Camb.) 2012 48 11352 11354 4G9C 22954737 Human B-Raf Kinase Domain bound to a Type II Pyrazolopyridine Inhibitor 2012-07-23 2012-11-14 Wenglowsky, S.,Moreno, D.,Laird, E.R.,Gloor, S.L.,Ren, L.,Risom, T.,Rudolph, J.,Sturgis, H.L.,Voegtli, W.C. Pyrazolopyridine inhibitors of B-Raf(V600E). Part 4: Rational design and kinase selectivity profile of cell potent type II inhibitors. Bioorg.Med.Chem.Lett. 2012 22 6237 6241 4G9R 22954737 B-Raf V600E Kinase Domain Bound to a Type II Dihydroquinazoline Inhibitor 2012-07-24 2012-11-14 Wenglowsky, S.,Moreno, D.,Laird, E.R.,Gloor, S.L.,Ren, L.,Risom, T.,Rudolph, J.,Sturgis, H.L.,Voegtli, W.C. Pyrazolopyridine inhibitors of B-Raf(V600E). Part 4: Rational design and kinase selectivity profile of cell potent type II inhibitors. Bioorg.Med.Chem.Lett. 2012 22 6237 6241 3ZD4 25195740 Full-Length Hammerhead Ribozyme with G12A substitution at the general base position 2012-11-24 2012-12-12 Schultz, E.P.,Vasquez, E.E.,Scott, W.G. Structural and Catalytic Effects of an Invariant Purine Substitution in the Hammerhead Ribozyme: Implications for the Mechanism of Acid-Base Catalysis. Acta Crystallogr.,Sect.D 2014 70 2256 0 4F2C 23271805 The Crystal Structure of a Human MitoNEET double mutant in which Gly 66 are Asp 67 are both Replaced with Ala Residues 2012-05-07 2012-12-26 Baxter, E.L.,Zuris, J.A.,Wang, C.,Vo, P.L.,Axelrod, H.L.,Cohen, A.E.,Paddock, M.L.,Nechushtai, R.,Onuchic, J.N.,Jennings, P.A. Allosteric control in a metalloprotein dramatically alters function. Proc.Natl.Acad.Sci.USA 2013 110 948 953 4HVC 23263184 Crystal structure of human prolyl-tRNA synthetase in complex with halofuginone and ATP analogue 2012-11-06 2013-01-02 Zhou, H.,Sun, L.,Yang, X.L.,Schimmel, P. ATP-directed capture of bioactive herbal-based medicine on human tRNA synthetase. Nature 2012 494 121 124 4DR9 23407310 Crystal structure of a peptide deformylase from synechococcus elongatus in complex with actinonin 2012-02-17 2013-01-16 Frank, J.A.,Lorimer, D.,Youle, M.,Witte, P.,Craig, T.,Abendroth, J.,Rohwer, F.,Edwards, R.A.,Segall, A.M.,Burgin, A.B. Structure and function of a cyanophage-encoded peptide deformylase. ISME J 2013 7 1150 1160 4GP4 23282175 Structure of Recombinant Cytochrome ba3 Oxidase mutant Y133F from Thermus thermophilus 2012-08-20 2013-01-16 McDonald, W.,Funatogawa, C.,Li, Y.,Szundi, I.,Chen, Y.,Fee, J.A.,Stout, C.D.,Einarsdottir, O. Ligand Access to the Active Site in Thermus thermophilusba(3) and Bovine Heart aa(3) Cytochrome Oxidases. Biochemistry 2013 52 640 652 4GP5 23282175 Structure of Recombinant Cytochrome ba3 Oxidase mutant Y133W from Thermus thermophilus 2012-08-20 2013-01-16 McDonald, W.,Funatogawa, C.,Li, Y.,Szundi, I.,Chen, Y.,Fee, J.A.,Stout, C.D.,Einarsdottir, O. Ligand Access to the Active Site in Thermus thermophilusba(3) and Bovine Heart aa(3) Cytochrome Oxidases. Biochemistry 2013 52 640 652 4GP8 23282175 Structure of Recombinant Cytochrome ba3 Oxidase mutant Y133W+T231F from Thermus thermophilus 2012-08-20 2013-01-16 McDonald, W.,Funatogawa, C.,Li, Y.,Szundi, I.,Chen, Y.,Fee, J.A.,Stout, C.D.,Einarsdottir, O. Ligand Access to the Active Site in Thermus thermophilusba(3) and Bovine Heart aa(3) Cytochrome Oxidases. Biochemistry 2013 52 640 652 4H1N 23296089 Crystal Structure of P450 2B4 F297A Mutant in Complex with Anti-platelet Drug Clopidogrel 2012-09-10 2013-01-16 Shah, M.B.,Jang, H.H.,Zhang, Q.,David Stout, C.,Halpert, J.R. X-ray crystal structure of the cytochrome P450 2B4 active site mutant F297A in complex with clopidogrel: Insights into compensatory rearrangements of the binding pocket. Arch.Biochem.Biophys. 2013 530 64 72 4HOV 23305326 DypB N246A in complex with manganese 2012-10-22 2013-01-16 Singh, R.,Grigg, J.C.,Qin, W.,Kadla, J.F.,Murphy, M.E.,Eltis, L.D. Improved Manganese-Oxidizing Activity of DypB, a Peroxidase from a Lignolytic Bacterium. Acs Chem.Biol. 2013 8 700 706 4H8P 23364793 NEAT5 domain of IsdX2, a B. anthracis hemophore in complex with heme 2012-09-23 2013-02-06 Honsa, E.S.,Owens, C.P.,Goulding, C.W.,Maresso, A.W. The Near-iron Transporter (NEAT) Domains of the Anthrax Hemophore IsdX2 Require a Critical Glutamine to Extract Heme from Methemoglobin. J.Biol.Chem. 2013 288 8479 8490 3VAJ 23376934 Structure of U2AF65 variant with BrU5C6 DNA 2011-12-29 2013-02-13 Jenkins, J.L.,Agrawal, A.A.,Gupta, A.,Green, M.R.,Kielkopf, C.L. U2AF65 adapts to diverse pre-mRNA splice sites through conformational selection of specific and promiscuous RNA recognition motifs. Nucleic Acids Res. 2013 41 3859 3873 4F5H 23396064 Intercoversion of Substrate Specificity: E. coli Aspatate Aminotransferase to Tyrosine Aminotransferase: Chimera P3. 2012-05-13 2013-02-13 Addington, T.A.,Mertz, R.W.,Siegel, J.B.,Thompson, J.M.,Fisher, A.J.,Filkov, V.,Fleischman, N.M.,Suen, A.A.,Zhang, C.,Toney, M.D. Janus: prediction and ranking of mutations required for functional interconversion of enzymes. J.Mol.Biol. 2013 425 1378 1389 4IWH Crystal structure of a 3-isopropylmalate dehydrogenase from Burkholderia pseudomallei 2013-01-23 2013-02-13 Edwards, T.E.,Abendroth, J.,Seattle Structural Genomics Center for Infectious Disease (SSGCID) Crystal structure of a 3-isopropylmalate dehydrogenase from Burkholderia pseudomallei TO BE PUBLISHED 0 0 0 0 4IZO Crystal structure of kinase Phosphoribosylaminoimidazole carboxylase, ATPase subunit from Burkholderia thailandensis 2013-01-30 2013-02-27 SSGCID,Abendroth, J.,Lorimer, D.,Edwards, T.E. Crystal structure of kinase Phosphoribosylaminoimidazole carboxylase, ATPase subunit from Burkholderia thailandensis To be Published 0 0 0 0 4DR8 23407310 Crystal structure of a peptide deformylase from Synechococcus elongatus 2012-02-17 2013-03-06 Frank, J.A.,Lorimer, D.,Youle, M.,Witte, P.,Craig, T.,Abendroth, J.,Rohwer, F.,Edwards, R.A.,Segall, A.M.,Burgin, A.B. Structure and function of a cyanophage-encoded peptide deformylase. ISME J 2013 7 1150 1160 4JCP Structure of Cyclophilin B from Brugia malayi 2013-02-22 2013-03-06 Clifton, M.C.,Abendroth, J.A.,Taylor, B. Structure of Cyclophilin B from Brugia malayi TO BE PUBLISHED 0 0 0 0 4J5U X-ray crystal structure of a serine hydroxymethyltransferase with covalently bound PLP from Rickettsia rickettsii str. Sheila Smith 2013-02-10 2013-03-13 Fairman, J.W.,Abendroth, J.A.,Edwards, T.E.,Lorimer, D. X-ray crystal structure of a serine hydroxymethyltransferase with covalently bound PLP from Rickettsia rickettsii str. Sheila Smith TO BE PUBLISHED 0 0 0 0 4ISM 23548912 Crystal structure of ferritin from Pseudo-nitzschia multiseries soaked with zinc 2013-01-16 2013-03-20 Pfaffen, S.,Abdulqadir, R.,Le Brun, N.E.,Murphy, M.E. Mechanism of ferrous iron binding and oxidation by ferritin from a pennate diatom. J.Biol.Chem. 2013 288 14917 14925 4ISP 23548912 Crystal structure of iron soaked (4h) ferritin from Pseudo-nitzschia multiseries 2013-01-17 2013-03-20 Pfaffen, S.,Abdulqadir, R.,Le Brun, N.E.,Murphy, M.E. Mechanism of ferrous iron binding and oxidation by ferritin from a pennate diatom. J.Biol.Chem. 2013 288 14917 14925 4ITT 23548912 Crystal structure of iron soaked (5 min) ferritin from Pseudo-nitzschia multiseries 2013-01-18 2013-03-20 Pfaffen, S.,Abdulqadir, R.,Le Brun, N.E.,Murphy, M.E. Mechanism of ferrous iron binding and oxidation by ferritin from a pennate diatom. J.Biol.Chem. 2013 288 14917 14925 4ITW 23548912 Anaerobic crystal structure of iron soaked (75 min) ferritin from Pseudo-nitzschia multiseries 2013-01-18 2013-03-20 Pfaffen, S.,Abdulqadir, R.,Le Brun, N.E.,Murphy, M.E. Mechanism of ferrous iron binding and oxidation by ferritin from a pennate diatom. J.Biol.Chem. 2013 288 14917 14925 4IWJ 23548912 Crystal structure of iron soaked (45 min) ferritin from Pseudo-nitzschia multiseries 2013-01-23 2013-03-20 Pfaffen, S.,Abdulqadir, R.,Le Brun, N.E.,Murphy, M.E. Mechanism of ferrous iron binding and oxidation by ferritin from a pennate diatom. J.Biol.Chem. 2013 288 14917 14925 4IWK 23548912 Crystal structure of iron soaked (overnight) ferritin from Pseudo-nitzschia multiseries 2013-01-23 2013-03-20 Pfaffen, S.,Abdulqadir, R.,Le Brun, N.E.,Murphy, M.E. Mechanism of ferrous iron binding and oxidation by ferritin from a pennate diatom. J.Biol.Chem. 2013 288 14917 14925 4IXK 23548912 Anaerobic crystal structure of iron soaked (2 h) ferritin from Pseudo-nitzschia multiseries 2013-01-26 2013-03-20 Pfaffen, S.,Abdulqadir, R.,Le Brun, N.E.,Murphy, M.E. Mechanism of ferrous iron binding and oxidation by ferritin from a pennate diatom. J.Biol.Chem. 2013 288 14917 14925 4JE1 Crystal structure of thiol peroxidase from BURKHOLDERIA CENOCEPACIA J2315 2013-02-26 2013-03-20 SSGCID,Davies, D.R.,Abendroth, J.A.,Clifton, M.C.,Edwards, T.,Lorimer, D. Crystal structure of thiol peroxidase from BURKHOLDERIA CENOCEPACIA J2315 To be Published 0 0 0 0 4I9X 23555243 Crystal structure of human cytomegalovirus glycoprotein UL141 targeting the death receptor TRAIL-R2 2012-12-05 2013-04-03 Nemcovicova, I.,Benedict, C.A.,Zajonc, D.M. Structure of Human Cytomegalovirus UL141 Binding to TRAIL-R2 Reveals Novel, Non-canonical Death Receptor Interactions. Plos Pathog. 2013 9 0 0 4JIG Crystal structure of a putative dehydrogenase from Burkholderia cenocepacia 2013-03-06 2013-04-03 Edwards, T.E.,Abendroth, J.,Seattle Structural Genomics Center for Infectious Disease Crystal structure of a putative dehydrogenase from Burkholderia cenocepacia TO BE PUBLISHED 0 0 0 0 4JP9 23537249 Spirocyclic Beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1) Inhibitors 2013-03-19 2013-04-10 Hunt, K.W.,Cook, A.W.,Watts, R.J.,Clark, C.T.,Vigers, G.,Smith, D.,Metcalf, A.T.,Gunawardana, I.W.,Burkard, M.,Cox, A.A.,Geck Do, M.K.,Dutcher, D.,Thomas, A.A.,Rana, S.,Kallan, N.C.,DeLisle, R.K.,Rizzi, J.P.,Regal, K.,Sammond, D.,Groneberg, R.,Siu, M.,Purkey, H.,Lyssikatos, J.P.,Marlow, A.,Liu, X.,Tang, T.P. Spirocyclic beta-site amyloid precursor protein cleaving enzyme 1 (BACE1) inhibitors: from hit to lowering of cerebrospinal fluid (CSF) amyloid beta in a higher species. J.Med.Chem. 2013 56 3379 3403 4JF2 23584677 Structure of a class II preQ1 riboswitch reveals ligand recognition by a new fold 2013-02-27 2013-04-17 Liberman, J.A.,Salim, M.,Krucinska, J.,Wedekind, J.E. Structure of a class II preQ1 riboswitch reveals ligand recognition by a new fold. Nat.Chem.Biol. 2013 9 353 355 4EHE 22335519 B-Raf Kinase Domain in Complex with an Aminothienopyrimidine-based Inhibitor 2012-04-02 2013-04-24 Mathieu, S.,Gradl, S.N.,Ren, L.,Wen, Z.,Aliagas, I.,Gunzner-Toste, J.,Lee, W.,Pulk, R.,Zhao, G.,Alicke, B.,Boggs, J.W.,Buckmelter, A.J.,Choo, E.F.,Dinkel, V.,Gloor, S.L.,Gould, S.E.,Hansen, J.D.,Hastings, G.,Hatzivassiliou, G.,Laird, E.R.,Moreno, D.,Ran, Y.,Voegtli, W.C.,Wenglowsky, S.,Grina, J.,Rudolph, J. Potent and selective aminopyrimidine-based B-raf inhibitors with favorable physicochemical and pharmacokinetic properties. J.Med.Chem. 2012 55 2869 2881 4EHG 22335519 B-Raf Kinase Domain in Complex with an Aminopyridimine-based Inhibitor 2012-04-02 2013-04-24 Mathieu, S.,Gradl, S.N.,Ren, L.,Wen, Z.,Aliagas, I.,Gunzner-Toste, J.,Lee, W.,Pulk, R.,Zhao, G.,Alicke, B.,Boggs, J.W.,Buckmelter, A.J.,Choo, E.F.,Dinkel, V.,Gloor, S.L.,Gould, S.E.,Hansen, J.D.,Hastings, G.,Hatzivassiliou, G.,Laird, E.R.,Moreno, D.,Ran, Y.,Voegtli, W.C.,Wenglowsky, S.,Grina, J.,Rudolph, J. Potent and selective aminopyrimidine-based B-raf inhibitors with favorable physicochemical and pharmacokinetic properties. J.Med.Chem. 2012 55 2869 2881 4I3Q 23586711 Crystal structure of human CYP3A4 coordinated to a water molecule 2012-11-26 2013-04-24 Sevrioukova, I.F.,Poulos, T.L. Pyridine-Substituted Desoxyritonavir Is a More Potent Inhibitor of Cytochrome P450 3A4 than Ritonavir. J.Med.Chem. 2013 56 3733 3741 4I4G 23586711 Crystal structure of CYP3A4 ligated to oxazole-substituted desoxyritonavir 2012-11-27 2013-04-24 Sevrioukova, I.F.,Poulos, T.L. Pyridine-Substituted Desoxyritonavir Is a More Potent Inhibitor of Cytochrome P450 3A4 than Ritonavir. J.Med.Chem. 2013 56 3733 3741 4I4H 23586711 Crystal structure of CYP3A4 ligated to pyridine-substituted desoxyritonavir 2012-11-27 2013-04-24 Sevrioukova, I.F.,Poulos, T.L. Pyridine-Substituted Desoxyritonavir Is a More Potent Inhibitor of Cytochrome P450 3A4 than Ritonavir. J.Med.Chem. 2013 56 3733 3741 4IMS 23451760 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6,6'-((5-(3-aminopropyl)-1,3-phenylene)bis(ethane-2,1-diyl))bis(4-methylpyridin-2-amine) 2013-01-03 2013-04-24 Huang, H.,Li, H.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Structure-guided design of selective inhibitors of neuronal nitric oxide synthase. J.Med.Chem. 2013 56 3024 3032 4IMW 23451760 Structure of rat neuronal nitric oxide synthase in complex with 3,5-bis(2-(6-amino-4-methylpyridin-2-yl)ethyl)benzonitrile 2013-01-03 2013-04-24 Huang, H.,Li, H.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Structure-guided design of selective inhibitors of neuronal nitric oxide synthase. J.Med.Chem. 2013 56 3024 3032 4IMX 23451760 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 3,5-bis(2-(6-amino-4-methylpyridin-2-yl)ethyl)benzonitrile 2013-01-03 2013-04-24 Huang, H.,Li, H.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Structure-guided design of selective inhibitors of neuronal nitric oxide synthase. J.Med.Chem. 2013 56 3024 3032 4EJD 23540839 HIV Protease (PR) dimer in closed form with pepstatin in active site and fragment 1F1 in the outside/top of flap 2012-04-06 2013-05-01 Tiefenbrunn, T.,Forli, S.,Baksh, M.M.,Chang, M.W.,Happer, M.,Lin, Y.C.,Perryman, A.L.,Rhee, J.K.,Torbett, B.E.,Olson, A.J.,Elder, J.H.,Finn, M.G.,Stout, C.D. Small molecule regulation of protein conformation by binding in the Flap of HIV protease. Acs Chem.Biol. 2013 8 1223 1231 4IN6 23480277 (M)L214A mutant of the Rhodobacter sphaeroides Reaction Center 2013-01-04 2013-05-01 Saer, R.G.,Hardjasa, A.,Rosell, F.I.,Mauk, A.G.,Murphy, M.E.,Beatty, J.T. Role of Rhodobacter sphaeroides Photosynthetic Reaction Center Residue M214 in the Composition, Absorbance Properties, and Conformations of HA and BA Cofactors. Biochemistry 2013 52 2206 2217 4K9D X-ray crystal structure of a Glyceraldehyde 3-phosphate dehydrogenase from Brugia malayi bound to the co-factor NAD 2013-04-19 2013-05-01 Fairman, J.W.,Fox, D.,Lukacs, C.M.,Edwards, T.E.,Lorimer, D. X-ray crystal structure of a Glyceraldehyde 3-phosphate dehydrogenase from Brugia malayi bound to the co-factor NAD TO BE PUBLISHED 0 0 0 0 4FVW 23586781 Structure of rat nNOS heme domain in complex with N(omega)-methoxy-L-arginine 2012-06-29 2013-05-15 Jansen Labby, K.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Methylated N(omega)-Hydroxy-l-arginine Analogues as Mechanistic Probes for the Second Step of the Nitric Oxide Synthase-Catalyzed Reaction Biochemistry 2013 52 3062 3073 4FVX 23586781 Structure of rat nNOS heme domain in complex with N(omega)-ethoxy-L-arginine 2012-06-29 2013-05-15 Jansen Labby, K.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Methylated N(omega)-Hydroxy-l-arginine Analogues as Mechanistic Probes for the Second Step of the Nitric Oxide Synthase-Catalyzed Reaction Biochemistry 2013 52 3062 3073 4FVZ 23586781 Structure of rat nNOS heme domain in complex with N(omega)-methyl- N(omega)-methoxy-L-arginine 2012-06-29 2013-05-15 Jansen Labby, K.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Methylated N(omega)-Hydroxy-l-arginine Analogues as Mechanistic Probes for the Second Step of the Nitric Oxide Synthase-Catalyzed Reaction Biochemistry 2013 52 3062 3073 4FW0 23586781 Structure of rat nNOS heme domain in complex with N(delta)-methyl- N(omega)-hydroxy-L-arginine 2012-06-29 2013-05-15 Jansen Labby, K.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Methylated N(omega)-Hydroxy-l-arginine Analogues as Mechanistic Probes for the Second Step of the Nitric Oxide Synthase-Catalyzed Reaction Biochemistry 2013 52 3062 3073 4GQE 23586781 Structure of rat neuronal nitric oxide synthase heme domain in complex with (5E)-5-[(N-tert-butoxycarbamimidoyl)imino]-L-norvaline 2012-08-22 2013-05-15 Jansen Labby, K.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Methylated N(omega)-Hydroxy-l-arginine Analogues as Mechanistic Probes for the Second Step of the Nitric Oxide Synthase-Catalyzed Reaction Biochemistry 2013 52 3062 3073 4KMS 33620038 Crystal structure of Acetoacetyl-CoA reductase from Rickettsia felis 2013-05-08 2013-05-22 Rodarte, J.V.,Abendroth, J.,Edwards, T.E.,Lorimer, D.D.,Staker, B.L.,Zhang, S.,Myler, P.J.,McLaughlin, K.J. Crystal structure of acetoacetyl-CoA reductase from Rickettsia felis. Acta Crystallogr.,Sect.F 2021 77 54 60 4IN7 23480277 (M)L214N mutant of the Rhodobacter sphaeroides Reaction Center 2013-01-04 2013-06-05 Saer, R.G.,Hardjasa, A.,Rosell, F.I.,Mauk, A.G.,Murphy, M.E.,Beatty, J.T. Role of Rhodobacter sphaeroides photosynthetic reaction center residue M214 in the composition, absorbance properties, and conformations of H(A) and B(A) cofactors. Biochemistry 2013 52 2206 2217 4GMY 23867602 JAK2 kinase (JH1 domain) in complex with 2,6-DICHLORO-N-{2-[(CYCLOPROPYLCARBONYL)AMINO]PYRIDIN-4-YL}BENZAMIDE 2012-08-16 2013-06-19 Liang, J.,Tsui, V.,Van Abbema, A.,Bao, L.,Barrett, K.,Beresini, M.,Berezhkovskiy, L.,Blair, W.S.,Chang, C.,Driscoll, J.,Eigenbrot, C.,Ghilardi, N.,Gibbons, P.,Halladay, J.,Johnson, A.,Kohli, P.B.,Lai, Y.,Liimatta, M.,Mantik, P.,Menghrajani, K.,Murray, J.,Sambrone, A.,Xiao, Y.,Shia, S.,Shin, Y.,Smith, J.,Sohn, S.,Stanley, M.,Ultsch, M.,Zhang, B.,Wu, L.C.,Magnuson, S. Lead identification of novel and selective TYK2 inhibitors. Eur.J.Med.Chem. 2013 67 175 187 4JWU 23744947 Crystal structure of Cytochrome P450cam-putidaredoxin complex 2013-03-27 2013-06-19 Tripathi, S.,Li, H.,Poulos, T.L. Structural basis for effector control and redox partner recognition in cytochrome P450. Science 2013 340 1227 1230 4JX1 23744947 Crystal structure of reduced Cytochrome P450cam-putidaredoxin complex bound to camphor and 5-exo-hydroxycamphor 2013-03-27 2013-06-19 Tripathi, S.,Li, H.,Poulos, T.L. Structural basis for effector control and redox partner recognition in cytochrome P450. Science 2013 340 1227 1230 4K9T 23746300 Complex of CYP3A4 with a desoxyritonavir analog 2013-04-21 2013-06-19 Sevrioukova, I.F.,Poulos, T.L. Dissecting Cytochrome P450 3A4-Ligand Interactions Using Ritonavir Analogues. Biochemistry 2013 52 4474 4481 4K9U 23746300 Complex of human CYP3A4 with a desoxyritonavir analog 2013-04-21 2013-06-19 Sevrioukova, I.F.,Poulos, T.L. Dissecting Cytochrome P450 3A4-Ligand Interactions Using Ritonavir Analogues. Biochemistry 2013 52 4474 4481 4K9V 23746300 Complex of CYP3A4 with a desoxyritonavir analog 2013-04-21 2013-06-19 Sevrioukova, I.F.,Poulos, T.L. Dissecting Cytochrome P450 3A4-Ligand Interactions Using Ritonavir Analogues. Biochemistry 2013 52 4474 4481 4L82 Structure of a putative oxidoreductase from Rickettsia felis 2013-06-15 2013-06-26 Clifton, M.C.,Abendroth, J.A. Structure of a putative oxidoreductase from Rickettsia felis To be Published 0 0 0 0 4GMM 23127136 Structure of rat cytosolic PEPCK Ld_1g in complex with Beta-Sulfopyruvate and GTP 2012-08-16 2013-07-03 Johnson, T.A.,Holyoak, T. The {Omega}-loop lid domain of phosphoenolpyruvate carboxykinase is essential for catalytic function. Biochemistry 2012 51 9547 9559 4GMU 23127136 Structure of rat cytosolic PEPCK Ld_1g in complex with oxalate and GTP 2012-08-16 2013-07-03 Johnson, T.A.,Holyoak, T. The {Omega}-loop lid domain of phosphoenolpyruvate carboxykinase is essential for catalytic function. Biochemistry 2012 51 9547 9559 4GMW 23127136 Structure of rat cytosolic PEPCK Ld_1g in complex with PEP and GDP 2012-08-16 2013-07-03 Johnson, T.A.,Holyoak, T. The {Omega}-loop lid domain of phosphoenolpyruvate carboxykinase is essential for catalytic function. Biochemistry 2012 51 9547 9559 4GNL 23127136 Structure of rat cytosolic PEPCK Ld_2g in complex with PEP and GDP 2012-08-17 2013-07-03 Johnson, T.A.,Holyoak, T. The {Omega}-loop lid domain of phosphoenolpyruvate carboxykinase is essential for catalytic function. Biochemistry 2012 51 9547 9559 4GNM 23127136 Structure of rat cytosolic PEPCK Ld_2g in complex with oxalate and GTP 2012-08-17 2013-07-03 Johnson, T.A.,Holyoak, T. The {Omega}-loop lid domain of phosphoenolpyruvate carboxykinase is essential for catalytic function. Biochemistry 2012 51 9547 9559 4GNO 23127136 Structure of rat cytosolic PEPCK Ld_3g in complex with Beta-Sulfopyruvate and GTP 2012-08-17 2013-07-03 Johnson, T.A.,Holyoak, T. The {Omega}-loop lid domain of phosphoenolpyruvate carboxykinase is essential for catalytic function. Biochemistry 2012 51 9547 9559 4GNP 23127136 Structure of rat cytosolic PEPCK Ld_3g in complex with PEP and GDP 2012-08-17 2013-07-03 Johnson, T.A.,Holyoak, T. The {Omega}-loop lid domain of phosphoenolpyruvate carboxykinase is essential for catalytic function. Biochemistry 2012 51 9547 9559 4GNQ 23127136 Structure of rat cytosolic PEPCK Ld_3g in complex with oxalate and GTP 2012-08-17 2013-07-03 Johnson, T.A.,Holyoak, T. The {Omega}-loop lid domain of phosphoenolpyruvate carboxykinase is essential for catalytic function. Biochemistry 2012 51 9547 9559 4I91 23786449 Crystal Structure of Cytochrome P450 2B6 (Y226H/K262R) in complex with alpha-Pinene. 2012-12-04 2013-07-03 Wilderman, P.R.,Shah, M.B.,Jang, H.H.,Stout, C.D.,Halpert, J.R. Structural and Thermodynamic Basis of (+)-alpha-Pinene Binding to Human Cytochrome P450 2B6. J.Am.Chem.Soc. 2013 135 10433 10440 4IH6 23509929 Hepatitis C Virus polymerase NS5B (BK) with fragment-based compounds 2012-12-18 2013-07-03 Talamas, F.X.,Ao-Ieong, G.,Brameld, K.A.,Chin, E.,de Vicente, J.,Dunn, J.P.,Ghate, M.,Giannetti, A.M.,Harris, S.F.,Labadie, S.S.,Leveque, V.,Li, J.,Lui, A.S.,McCaleb, K.L.,Najera, I.,Schoenfeld, R.C.,Wang, B.,Wong, A. De novo fragment design: a medicinal chemistry approach to fragment-based lead generation. J.Med.Chem. 2013 56 3115 3119 4IH7 23509929 Hepatitis C Virus polymerase NS5B (BK) with fragment-based compounds 2012-12-18 2013-07-03 Talamas, F.X.,Ao-Ieong, G.,Brameld, K.A.,Chin, E.,de Vicente, J.,Dunn, J.P.,Ghate, M.,Giannetti, A.M.,Harris, S.F.,Labadie, S.S.,Leveque, V.,Li, J.,Lui, A.S.,McCaleb, K.L.,Najera, I.,Schoenfeld, R.C.,Wang, B.,Wong, A. De novo fragment design: a medicinal chemistry approach to fragment-based lead generation. J.Med.Chem. 2013 56 3115 3119 4FZE Crystal structure of N26_i1 Fab, an ADCC mediating anti-HIV-1 antibody. 2012-07-06 2013-07-10 Tolbert, W.D.,Wu, X.,Pazgier, M. Crystal structure of N26_i1 Fab, an ADCC mediating anti-HIV-1 antibody. To be Published 0 0 0 0 4JAD 23954305 STRUCTURAL DETERMINATION OF THE A50T:S279G:S280K:V281K:K282E:H283N VARIANT OF CITRATE SYNTHASE from E. COLI 2013-02-18 2013-07-17 Duckworth, H.W.,Nguyen, N.T.,Gao, Y.,Donald, L.J.,Maurus, R.,Ayed, A.,Bruneau, B.,Brayer, G.D. Enzyme-substrate complexes of allosteric citrate synthase: Evidence for a novel intermediate in substrate binding. Biochim.Biophys.Acta 2013 1834 2546 2553 4JAE 23954305 STRUCTURAL DETERMINATION OF THE A50T:S279G:S280K:V281K:K282E:H283N VARIANT OF CITRATE SYNTHASE FROM E. COLI complexed WITH S-CARBOXYMETHYL-COA 2013-02-18 2013-07-17 Duckworth, H.W.,Nguyen, N.T.,Gao, Y.,Donald, L.J.,Maurus, R.,Ayed, A.,Bruneau, B.,Brayer, G.D. Enzyme-substrate complexes of allosteric citrate synthase: Evidence for a novel intermediate in substrate binding. Biochim.Biophys.Acta 2013 1834 2546 2553 4JAF 23954305 STRUCTURAL DETERMINATION OF THE A50T:S279G:S280K:V281K:K282E:H283N VARIANT OF CITRATE SYNTHASE FROM E. COLI COMPLEXED with NADH 2013-02-18 2013-07-17 Duckworth, H.W.,Nguyen, N.T.,Gao, Y.,Donald, L.J.,Maurus, R.,Ayed, A.,Bruneau, B.,Brayer, G.D. Enzyme-substrate complexes of allosteric citrate synthase: Evidence for a novel intermediate in substrate binding. Biochim.Biophys.Acta 2013 1834 2546 2553 4JAG 23954305 STRUCTURAL DETERMINATION OF THE A50T:S279G:S280K:V281K:K282E:H283N VARIANT OF CITRATE SYNTHASE FROM E. COLI COMPLEXED WITH oxaloacetate 2013-02-18 2013-07-17 Duckworth, H.W.,Nguyen, N.T.,Gao, Y.,Donald, L.J.,Maurus, R.,Ayed, A.,Bruneau, B.,Brayer, G.D. Enzyme-substrate complexes of allosteric citrate synthase: Evidence for a novel intermediate in substrate binding. Biochim.Biophys.Acta 2013 1834 2546 2553 4G70 Structure of Recombinant Cytochrome ba3 Oxidase mutant V236T from Thermus thermophilus 2012-07-19 2013-07-24 Li, Y.,Chen, Y.,Stout, C.D. Structure of Recombinant Cytochrome ba3 Oxidase mutant V236T from Thermus thermophilus To be Published 0 0 0 0 4G71 Structure of Recombinant Cytochrome ba3 Oxidase mutant V236N from Thermus thermophilus 2012-07-19 2013-07-24 Li, Y.,Chen, Y.,Stout, C.D. Structure of Recombinant Cytochrome ba3 Oxidase mutant V236N from Thermus thermophilus To be Published 0 0 0 0 4G72 Structure of Recombinant Cytochrome ba3 Oxidase mutant V236M from Thermus thermophilus 2012-07-19 2013-07-24 Li, Y.,Chen, Y.,Stout, C.D. Structure of Recombinant Cytochrome ba3 Oxidase mutant V236M from Thermus thermophilus To be Published 0 0 0 0 4G7Q Structure of Recombinant Cytochrome ba3 Oxidase mutant V236L from Thermus thermophilus 2012-07-20 2013-07-24 Li, Y.,Chen, Y.,Stout, C.D. Structure of Recombinant Cytochrome ba3 Oxidase mutant V236L from Thermus thermophilus To be Published 0 0 0 0 4G7R Structure of Recombinant Cytochrome ba3 Oxidase mutant V236A from Thermus thermophilus 2012-07-20 2013-07-24 Li, Y.,Chen, Y.,Stout, C.D. Structure of Recombinant Cytochrome ba3 Oxidase mutant V236A from Thermus thermophilus To be Published 0 0 0 0 4G7S Structure of Recombinant Cytochrome ba3 Oxidase mutant V236I from Thermus thermophilus 2012-07-20 2013-07-24 Li, Y.,Chen, Y.,Stout, C.D. Structure of Recombinant Cytochrome ba3 Oxidase mutant V236I from Thermus thermophilus To be Published 0 0 0 0 4J5N 23837603 Crystal Structure of a Deinococcus radiodurans PTE-like lactonase (drPLL) mutant Y28L/D71N/E101G/E179D/V235L/L270M 2013-02-08 2013-07-24 Meier, M.M.,Rajendran, C.,Malisi, C.,Fox, N.G.,Xu, C.,Schlee, S.,Barondeau, D.P.,Hocker, B.,Sterner, R.,Raushel, F.M. Molecular engineering of organophosphate hydrolysis activity from a weak promiscuous lactonase template. J.Am.Chem.Soc. 2013 135 11670 11677 4J5N 23837603 Crystal Structure of a Deinococcus radiodurans PTE-like lactonase (drPLL) mutant Y28L/D71N/E101G/E179D/V235L/L270M 2013-02-08 2013-07-24 Meier, M.M.,Rajendran, C.,Malisi, C.,Fox, N.G.,Xu, C.,Schlee, S.,Barondeau, D.P.,Hocker, B.,Sterner, R.,Raushel, F.M. Molecular engineering of organophosphate hydrolysis activity from a weak promiscuous lactonase template. J.Am.Chem.Soc. 2013 135 11670 11677 4LGV 25613812 X-ray crystal structure of Glucose-6-phosphate 1-dehydrogenase from Mycobacterium avium 2013-06-28 2013-07-24 Baugh, L.,Phan, I.,Begley, D.W.,Clifton, M.C.,Armour, B.,Dranow, D.M.,Taylor, B.M.,Muruthi, M.M.,Abendroth, J.,Fairman, J.W.,Fox, D.,Dieterich, S.H.,Staker, B.L.,Gardberg, A.S.,Choi, R.,Hewitt, S.N.,Napuli, A.J.,Myers, J.,Barrett, L.K.,Zhang, Y.,Ferrell, M.,Mundt, E.,Thompkins, K.,Tran, N.,Lyons-Abbott, S.,Abramov, A.,Sekar, A.,Serbzhinskiy, D.,Lorimer, D.,Buchko, G.W.,Stacy, R.,Stewart, L.J.,Edwards, T.E.,Van Voorhis, W.C.,Myler, P.J. Increasing the structural coverage of tuberculosis drug targets. Tuberculosis (Edinb) 2015 95 142 148 4H43 Structure of the Salmonella plasmid virulence C protein (SpvC) H106N mutant. 2012-09-16 2013-08-07 Shenoy, A.G.,Kuznetsov, V.,Johnson, S.J.,Hengge, A.C. Structural and mechanistic Investigations of phosphothreonine lyase class of enzymes. To be Published 0 0 0 0 4JSE 23867386 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6,6'-(pentane-1,5-diyl)bis(4-methylpyridin-2-amine) 2013-03-22 2013-08-07 Jing, Q.,Li, H.,Fang, J.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. In search of potent and selective inhibitors of neuronal nitric oxide synthase with more simple structures. Bioorg.Med.Chem. 2013 21 5323 5331 4JSF 23867386 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6,6'-(heptane-1,7-diyl)bis(4-methylpyridin-2-amine) 2013-03-22 2013-08-07 Jing, Q.,Li, H.,Fang, J.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. In search of potent and selective inhibitors of neuronal nitric oxide synthase with more simple structures. Bioorg.Med.Chem. 2013 21 5323 5331 4JSI 23867386 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-((3-(((3-fluorophenethyl)amino)methyl)phenoxy)methyl)-4-methylpyridin-2-amine 2013-03-22 2013-08-07 Jing, Q.,Li, H.,Fang, J.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. In search of potent and selective inhibitors of neuronal nitric oxide synthase with more simple structures. Bioorg.Med.Chem. 2013 21 5323 5331 4JSJ 23867386 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(((5-(((3-fluorophenethyl)amino)methyl)pyridin-3-yl)oxy)methyl)-4-methylpyridin-2-amine 2013-03-22 2013-08-07 Jing, Q.,Li, H.,Fang, J.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. In search of potent and selective inhibitors of neuronal nitric oxide synthase with more simple structures. Bioorg.Med.Chem. 2013 21 5323 5331 4JSK 23867386 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 6,6'-(pentane-1,5-diyl)bis(4-methylpyridin-2-amine) 2013-03-22 2013-08-07 Jing, Q.,Li, H.,Fang, J.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. In search of potent and selective inhibitors of neuronal nitric oxide synthase with more simple structures. Bioorg.Med.Chem. 2013 21 5323 5331 4JSL 23867386 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 6,6'-(heptane-1,7-diyl)bis(4-methylpyridin-2-amine) 2013-03-22 2013-08-07 Jing, Q.,Li, H.,Fang, J.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. In search of potent and selective inhibitors of neuronal nitric oxide synthase with more simple structures. Bioorg.Med.Chem. 2013 21 5323 5331 4JSM 23867386 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 6-(((5-(((3-fluorophenethyl)amino)methyl)pyridin-3-yl)oxy)methyl)-4-methylpyridin-2-amine 2013-03-22 2013-08-07 Jing, Q.,Li, H.,Fang, J.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. In search of potent and selective inhibitors of neuronal nitric oxide synthase with more simple structures. Bioorg.Med.Chem. 2013 21 5323 5331 4GJ4 23934793 The Crystal Structure of the soluble Guanylate Cyclase PAS alpha domain from Manduca sexta 2012-08-09 2013-08-14 Purohit, R.,Weichsel, A.,Montfort, W.R. Crystal structure of the Alpha subunit PAS domain from soluble guanylyl cyclase. Protein Sci. 2013 22 1439 1444 4GUQ 23892287 Structure of mutS139F p73 DNA binding domain complexed with 20BP DNA response element 2012-08-29 2013-08-14 Ciribilli, Y.,Monti, P.,Bisio, A.,Nguyen, H.T.,Ethayathulla, A.S.,Ramos, A.,Foggetti, G.,Menichini, P.,Menendez, D.,Resnick, M.A.,Viadiu, H.,Fronza, G.,Inga, A. Transactivation specificity is conserved among p53 family proteins and depends on a response element sequence code. Nucleic Acids Res. 2013 41 8637 8653 4M1N 23943616 Crystal structure of Plasmodium falciparum ubiquitin conjugating enzyme UBC9 2013-08-03 2013-08-21 Reiter, K.,Mukhopadhyay, D.,Zhang, H.,Boucher, L.E.,Kumar, N.,Bosch, J.,Matunis, M.J. Identification of Biochemically Distinct Properties of the Small Ubiquitin-related Modifier (SUMO) Conjugation Pathway in Plasmodium falciparum. J.Biol.Chem. 2013 288 27724 27736 4J6I 23540645 Discovery of thiazolobenzoxepin PI3-kinase inhibitors that spare the PI3-kinase beta isoform 2013-02-11 2013-08-28 Staben, S.T.,Ndubaku, C.,Blaquiere, N.,Belvin, M.,Bull, R.J.,Dudley, D.,Edgar, K.,Gray, D.,Heald, R.,Heffron, T.P.,Jones, G.E.,Jones, M.,Kolesnikov, A.,Lee, L.,Lesnick, J.,Lewis, C.,Murray, J.,McLean, N.J.,Nonomiya, J.,Olivero, A.G.,Ord, R.,Pang, J.,Price, S.,Prior, W.W.,Rouge, L.,Salphati, L.,Sampath, D.,Wallin, J.,Wang, L.,Wei, B.,Weismann, C.,Wu, P. Discovery of thiazolobenzoxepin PI3-kinase inhibitors that spare the PI3-kinase beta isoform. Bioorg.Med.Chem.Lett. 2013 23 2606 2613 4IMH 23973453 Crystal Structure of Cytoplasmic Heme Binding Protein, PhuS, from Pseudomonas aeruginosa 2013-01-02 2013-09-18 Tripathi, S.,O'Neill, M.J.,Wilks, A.,Poulos, T.L. Crystal structure of the Pseudomonas aeruginosa cytoplasmic heme binding protein, Apo-PhuS. J.Inorg.Biochem. 2013 0 131 136 4K5F 23993333 Structure of neuronal nitric oxide synthase heme domain in complex with (S)-1,3-bis((2-amino-4-methylpyridin-6-yl)-methoxy)-butan-4-amine 2013-04-14 2013-09-18 Jing, Q.,Li, H.,Chreifi, G.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Chiral linkers to improve selectivity of double-headed neuronal nitric oxide synthase inhibitors. Bioorg.Med.Chem.Lett. 2013 23 5674 5679 4K5G 23993333 Structure of neuronal nitric oxide synthase heme domain in complex with ((2S, 3S)-1,3-bis((6-(2,5-dimethyl-1H-pyrrol-1-yl)-4-methylpyridin-2-yl)methoxy)-2-aminobutane 2013-04-14 2013-09-18 Jing, Q.,Li, H.,Chreifi, G.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Chiral linkers to improve selectivity of double-headed neuronal nitric oxide synthase inhibitors. Bioorg.Med.Chem.Lett. 2013 23 5674 5679 4K5I 23993333 Structure of bovine endothelial nitric oxide synthase heme domain in complex with (R)-1,2-bis((2-amino-4-methylpyridin-6-yl)-methoxy)-propan-3-amine 2013-04-14 2013-09-18 Jing, Q.,Li, H.,Chreifi, G.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Chiral linkers to improve selectivity of double-headed neuronal nitric oxide synthase inhibitors. Bioorg.Med.Chem.Lett. 2013 23 5674 5679 4K5J 23993333 Structure of bovine endothelial nitric oxide synthase heme domain in complex with (S)-1,3-bis((2-amino-4-methylpyridin-6-yl)-methoxy)-butan-4-amine 2013-04-14 2013-09-18 Jing, Q.,Li, H.,Chreifi, G.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Chiral linkers to improve selectivity of double-headed neuronal nitric oxide synthase inhibitors. Bioorg.Med.Chem.Lett. 2013 23 5674 5679 4K5K 23993333 Structure of bovine endothelial nitric oxide synthase heme domain in complex with ((2S, 3S)-1,3-bis((6-(2,5-dimethyl-1H-pyrrol-1-yl)-4-methylpyridin-2-yl)methoxy)-2-aminobutane 2013-04-14 2013-09-18 Jing, Q.,Li, H.,Chreifi, G.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Chiral linkers to improve selectivity of double-headed neuronal nitric oxide synthase inhibitors. Bioorg.Med.Chem.Lett. 2013 23 5674 5679 4KWV 24038671 Crystal Structure of human apo-QPRT 2013-05-24 2013-10-02 Malik, S.S.,Patterson, D.N.,Ncube, Z.,Toth, E.A. The crystal structure of human quinolinic acid phosphoribosyltransferase in complex with its inhibitor phthalic acid. Proteins 2014 82 405 414 4KWW 24038671 The crystal structure of human quinolinic acid phosphoribosyltransferase in complex with its inhibitor phthalic acid 2013-05-24 2013-10-02 Malik, S.S.,Patterson, D.N.,Ncube, Z.,Toth, E.A. The crystal structure of human quinolinic acid phosphoribosyltransferase in complex with its inhibitor phthalic acid. Proteins 2014 82 405 414 4L87 24095058 Crystal structure of the human seryl-tRNA synthetase in complex with Ser-SA at 2.9 Angstrom resolution 2013-06-16 2013-10-02 Xu, X.,Shi, Y.,Yang, X.L. Crystal Structure of Human Seryl-tRNA Synthetase and Ser-SA Complex Reveals a Molecular Lever Specific to Higher Eukaryotes. Structure 2013 21 2078 2086 4MBJ 24042006 Human B-Raf Kinase Domain in Complex with an Imidazopyridine-based Inhibitor 2013-08-19 2013-10-02 Newhouse, B.J.,Wenglowsky, S.,Grina, J.,Laird, E.R.,Voegtli, W.C.,Ren, L.,Ahrendt, K.,Buckmelter, A.,Gloor, S.L.,Klopfenstein, N.,Rudolph, J.,Wen, Z.,Li, X.,Feng, B. Imidazo[4,5-b]pyridine inhibitors of B-Raf kinase. Bioorg.Med.Chem.Lett. 2013 23 5896 5899 4MK7 24069953 Hepatitis C Virus polymerase NS5B genotype 1b (BK) in complex with inhibitor 2 (3-(3-tert-butyl-4-methoxyphenyl)pyridin-2(1H)-one) 2013-09-04 2013-10-09 Schoenfeld, R.C.,Bourdet, D.L.,Brameld, K.A.,Chin, E.,de Vicente, J.,Fung, A.,Harris, S.F.,Lee, E.K.,Le Pogam, S.,Leveque, V.,Li, J.,Lui, A.S.,Najera, I.,Rajyaguru, S.,Sangi, M.,Steiner, S.,Talamas, F.X.,Taygerly, J.P.,Zhao, J. Discovery of a Novel Series of Potent Non-Nucleoside Inhibitors of Hepatitis C Virus NS5B. J.Med.Chem. 2013 56 8163 8182 4MKA 24069953 Hepatitis C Virus polymerase NS5B genotype 1b (BK) in complex with inhibitor 13 (N-{2-[3-tert-butyl-2-methoxy-5-(2-oxo-1,2-dihydropyridin-3-yl)phenyl]-1,3-benzoxazol-5-yl}methanesulfonamide) 2013-09-04 2013-10-09 Schoenfeld, R.C.,Bourdet, D.L.,Brameld, K.A.,Chin, E.,de Vicente, J.,Fung, A.,Harris, S.F.,Lee, E.K.,Le Pogam, S.,Leveque, V.,Li, J.,Lui, A.S.,Najera, I.,Rajyaguru, S.,Sangi, M.,Steiner, S.,Talamas, F.X.,Taygerly, J.P.,Zhao, J. Discovery of a Novel Series of Potent Non-Nucleoside Inhibitors of Hepatitis C Virus NS5B. J.Med.Chem. 2013 56 8163 8182 4LUW 24145412 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 6-((((3R,5S)-5-(((6-amino-4-methylpyridin-2-yl)methoxy)methyl)pyrrolidin-3-yl)oxy)methyl)-4-methylpyridin-2-amine 2013-07-25 2013-10-23 Holden, J.K.,Li, H.,Jing, Q.,Kang, S.,Richo, J.,Silverman, R.B.,Poulos, T.L. Structural and biological studies on bacterial nitric oxide synthase inhibitors. Proc.Natl.Acad.Sci.USA 2013 110 18127 18131 4LUX 24145412 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-((((3R,5S)-5-(((6-amino-4-methylpyridin-2-yl)methoxy)methyl)pyrrolidin-3-yl)oxy)methyl)-4-methylpyridin-2-amine 2013-07-25 2013-10-23 Holden, J.K.,Li, H.,Jing, Q.,Kang, S.,Richo, J.,Silverman, R.B.,Poulos, T.L. Structural and biological studies on bacterial nitric oxide synthase inhibitors. Proc.Natl.Acad.Sci.USA 2013 110 18127 18131 4LWA 24145412 Structure of Bacillus subtilis nitric oxide synthase in complex with ((2S, 3S)-1,3-bis((6-(2,5-dimethyl-1H-pyrrol-1-yl)-4-methylpyridin-2-yl)methoxy)-2-aminobutane 2013-07-26 2013-10-23 Holden, J.K.,Li, H.,Jing, Q.,Kang, S.,Richo, J.,Silverman, R.B.,Poulos, T.L. Structural and biological studies on bacterial nitric oxide synthase inhibitors. Proc.Natl.Acad.Sci.USA 2013 110 18127 18131 4LWB 24145412 Structure of Bacillus subtilis nitric oxide synthase in complex with 6-((((3R,5S)-5-(((6-amino-4-methylpyridin-2-yl)methoxy)methyl)pyrrolidin-3-yl)oxy)methyl)-4-methylpyridin-2-amine 2013-07-26 2013-10-23 Holden, J.K.,Li, H.,Jing, Q.,Kang, S.,Richo, J.,Silverman, R.B.,Poulos, T.L. Structural and biological studies on bacterial nitric oxide synthase inhibitors. Proc.Natl.Acad.Sci.USA 2013 110 18127 18131 4LO4 24130488 Apo HA-70 2013-07-12 2013-10-30 Lee, K.,Gu, S.,Jin, L.,Le, T.T.,Cheng, L.W.,Strotmeier, J.,Kruel, A.M.,Yao, G.,Perry, K.,Rummel, A.,Jin, R. Structure of a Bimodular Botulinum Neurotoxin Complex Provides Insights into Its Oral Toxicity. Plos Pathog. 2013 9 0 0 4LO4 24130488 Apo HA-70 2013-07-12 2013-10-30 Lee, K.,Gu, S.,Jin, L.,Le, T.T.,Cheng, L.W.,Strotmeier, J.,Kruel, A.M.,Yao, G.,Perry, K.,Rummel, A.,Jin, R. Structure of a Bimodular Botulinum Neurotoxin Complex Provides Insights into Its Oral Toxicity. Plos Pathog. 2013 9 0 0 4IMC 24152047 Crystal Structure of Pasteurella multocida N-Acetyl-D-Neuraminic acid lyase 2013-01-02 2013-11-06 Huynh, N.,Aye, A.,Li, Y.,Yu, H.,Cao, H.,Tiwari, V.K.,Shin, D.W.,Chen, X.,Fisher, A.J. Structural Basis for Substrate Specificity and Mechanism of N-Acetyl-d-neuraminic Acid Lyase from Pasteurella multocida. Biochemistry 2013 52 8570 8579 4IMD 24152047 Crystal Structure of Pasteurella multocida N-Acetyl-D-Neuraminic acid lyase trapped with pyruvate covalently bound through a Schiff base to Lys164 2013-01-02 2013-11-06 Huynh, N.,Aye, A.,Li, Y.,Yu, H.,Cao, H.,Tiwari, V.K.,Shin, D.W.,Chen, X.,Fisher, A.J. Structural Basis for Substrate Specificity and Mechanism of N-Acetyl-d-neuraminic Acid Lyase from Pasteurella multocida. Biochemistry 2013 52 8570 8579 4IME 24152047 Crystal Structure of Pasteurella multocida N-Acetyl-D-Neuraminic acid lyase K164A Mutant 2013-01-02 2013-11-06 Huynh, N.,Aye, A.,Li, Y.,Yu, H.,Cao, H.,Tiwari, V.K.,Shin, D.W.,Chen, X.,Fisher, A.J. Structural Basis for Substrate Specificity and Mechanism of N-Acetyl-d-neuraminic Acid Lyase from Pasteurella multocida. Biochemistry 2013 52 8570 8579 4IMF 24152047 Crystal Structure of Pasteurella multocida N-Acetyl-D-Neuraminic acid lyase K164 mutant complexed with N-Acetylneuraminic acid 2013-01-02 2013-11-06 Huynh, N.,Aye, A.,Li, Y.,Yu, H.,Cao, H.,Tiwari, V.K.,Shin, D.W.,Chen, X.,Fisher, A.J. Structural Basis for Substrate Specificity and Mechanism of N-Acetyl-d-neuraminic Acid Lyase from Pasteurella multocida. Biochemistry 2013 52 8570 8579 4LGM 24161953 Crystal Structure of Sulfolobus solfataricus Vps4 2013-06-28 2013-11-06 Monroe, N.,Han, H.,Gonciarz, M.D.,Eckert, D.M.,Karren, M.A.,Whitby, F.G.,Sundquist, W.I.,Hill, C.P. The Oligomeric State of the Active Vps4 AAA ATPase. J.Mol.Biol. 2014 426 510 525 4LB1 24236072 Crystal structure of human alpha-defensin 1 (HNP1) Y16A/F28A mutant 2013-06-20 2013-11-27 Zhao, L.,Tolbert, W.D.,Ericksen, B.,Zhan, C.,Wu, X.,Yuan, W.,Li, X.,Pazgier, M.,Lu, W. Single, Double and Quadruple Alanine Substitutions at Oligomeric Interfaces Identify Hydrophobicity as the Key Determinant of Human Neutrophil Alpha Defensin HNP1 Function. Plos One 2013 8 0 0 4LB7 24236072 Crystal structure of human alpha-defensin 1 (HNP1) Y16A/I20A/L25A/F28A mutant. 2013-06-20 2013-11-27 Zhao, L.,Tolbert, W.D.,Ericksen, B.,Zhan, C.,Wu, X.,Yuan, W.,Li, X.,Pazgier, M.,Lu, W. Single, Double and Quadruple Alanine Substitutions at Oligomeric Interfaces Identify Hydrophobicity as the Key Determinant of Human Neutrophil Alpha Defensin HNP1 Function. Plos One 2013 8 0 0 4LND 24311596 Crystal structure of human apurinic/apyrimidinic endonuclease 1 with essential Mg2+ cofactor 2013-07-11 2013-11-27 Manvilla, B.A.,Pozharski, E.,Toth, E.A.,Drohat, A.C. Structure of human apurinic/apyrimidinic endonuclease 1 with the essential Mg(2+) cofactor. Acta Crystallogr.,Sect.D 2013 69 2555 2562 4C9K 24261604 Structure of Camphor and Hydroxycamphor bound wild type CYP101D1 2013-10-02 2013-12-04 Batabyal, D.,Poulos, T.L. Crystal Structures and Functional Characterization of Wild-Type Cyp101D1 and its Active Site Mutants. Biochemistry 2013 52 8898 0 4C9L 24261604 Structure of Cyanide and Camphor bound wild type CYP101D1 2013-10-02 2013-12-04 Batabyal, D.,Poulos, T.L. Crystal Structures and Functional Characterization of Wild Type and Active Sites Mutants of Cyp101D1. Biochemistry 2013 52 8898 0 4C9M 24261604 Structure of substrate free, glycerol bound wild type CYP101D1 2013-10-02 2013-12-04 Batabyal, D.,Poulos, T.L. Crystal Structures and Functional Characterization of Wild Type and Active Sites Mutants of Cyp101D1. Biochemistry 2013 52 8898 0 4C9N 24261604 Structure of camphor and hydroxycamphor bound D259N mutant of CYP101D1 2013-10-02 2013-12-04 Batabyal, D.,Poulos, T.L. Crystal Structures and Functional Characterization of Wild Type and Active Sites Mutants of Cyp101D1. Biochemistry 2013 52 8898 0 4C9O 24261604 Structure of Cyanide and Camphor bound D259N mutant of CYP101D1 2013-10-02 2013-12-04 Batabyal, D.,Poulos, T.L. Crystal Structures and Functional Characterization of Wild-Type Cyp101D1 and its Active Site Mutants. Biochemistry 2013 52 8898 0 4C9P 24261604 Structure of camphor bound T260A mutant of CYP101D1 2013-10-02 2013-12-04 Batabyal, D.,Poulos, T.L. Crystal Structures and Functional Characterization of Wild Type and Active Sites Mutants of Cyp101D1. Biochemistry 2013 52 8898 0 4JPM 24219313 Structure of SHV-1 beta-lactamase in complex with the 7-alkylidenecephalosporin DCM-1-10 at 1.14 Ang resolution 2013-03-19 2013-12-04 Rodkey, E.A.,McLeod, D.C.,Bethel, C.R.,Smith, K.M.,Xu, Y.,Chai, W.,Che, T.,Carey, P.R.,Bonomo, R.A.,van den Akker, F.,Buynak, J.D. beta-Lactamase Inhibition by 7-Alkylidenecephalosporin Sulfones: Allylic Transposition and Formation of an Unprecedented Stabilized Acyl-Enzyme. J.Am.Chem.Soc. 2013 135 18358 18369 4MJA 24298277 Synechocystis sp. PCC 6803 glutaredoxin A-A75I 2013-09-03 2013-12-04 Knaff, D.B.,Sutton, R.B. Utility of Synechocystis sp. PCC 6803 glutaredoxin A as a platform to study high-resolution mutagenesis of proteins. Front Plant Sci 2013 4 461 461 4MJB 24298277 Synechocystis sp. PCC 6803 glutaredoxin A-A79S 2013-09-03 2013-12-04 Knaff, D.B.,Sutton, R.B. Utility of Synechocystis sp. PCC 6803 glutaredoxin A as a platform to study high-resolution mutagenesis of proteins. Front Plant Sci 2013 4 461 461 4MJE 24298277 Synechocystis sp. PCC 6803 glutaredoxin A-R27L 2013-09-03 2013-12-04 Knaff, D.B.,Sutton, R.B. Utility of Synechocystis sp. PCC 6803 glutaredoxin A as a platform to study high-resolution mutagenesis of proteins. Front Plant Sci 2013 4 461 461 4IHB 24239457 X-RAY STRUCTURE OF THE canonical C2A DOMAIN FROM HUMAN DYSFERLIN 2012-12-18 2013-12-18 Fuson, K.,Rice, A.,Mahling, R.,Snow, A.,Nayak, K.,Shanbhogue, P.,Meyer, A.G.,Redpath, G.M.,Hinderliter, A.,Cooper, S.T.,Sutton, R.B. Alternate Splicing of Dysferlin C2A Confers Ca(2+)-Dependent and Ca(2+)-Independent Binding for Membrane Repair. Structure 2014 22 104 115 4IQH 24239457 Crystal Structure Analysis of Dysferlin C2A variant 1 (C2Av1) 2013-01-11 2013-12-18 Fuson, K.,Rice, A.,Mahling, R.,Snow, A.,Nayak, K.,Shanbhogue, P.,Meyer, A.G.,Redpath, G.M.,Hinderliter, A.,Cooper, S.T.,Sutton, R.B. Alternate Splicing of Dysferlin C2A Confers Ca(2+)-Dependent and Ca(2+)-Independent Binding for Membrane Repair. Structure 2014 22 104 115 4IZY 23664880 Crystal structure of JNK1 in complex with JIP1 peptide and 4-{4-[4-(4-Methanesulfonyl-piperidin-1-yl)-indol-1-yl]-pyrimidin-2-ylamino}-cyclohexan 2013-01-30 2013-12-18 Gong, L.,Han, X.,Silva, T.,Tan, Y.C.,Goyal, B.,Tivitmahaisoon, P.,Trejo, A.,Palmer, W.,Hogg, H.,Jahagir, A.,Alam, M.,Wagner, P.,Stein, K.,Filonova, L.,Loe, B.,Makra, F.,Rotstein, D.,Rapatova, L.,Dunn, J.,Zuo, F.,Dal Porto, J.,Wong, B.,Jin, S.,Chang, A.,Tran, P.,Hsieh, G.,Niu, L.,Shao, A.,Reuter, D.,Hermann, J.,Kuglstatter, A.,Goldstein, D. Development of indole/indazole-aminopyrimidines as inhibitors of c-Jun N-terminal kinase (JNK): optimization for JNK potency and physicochemical properties. Bioorg.Med.Chem.Lett. 2013 23 3565 3569 4LEV 24332030 Structure of human cGAS 2013-06-26 2013-12-25 Li, X.,Shu, C.,Yi, G.,Chaton, C.T.,Shelton, C.L.,Diao, J.,Zuo, X.,Kao, C.C.,Herr, A.B.,Li, P. Cyclic GMP-AMP Synthase Is Activated by Double-Stranded DNA-Induced Oligomerization. Immunity 2013 39 1019 1031 4LEW 24332030 Structure of human cGAS 2013-06-26 2013-12-25 Li, X.,Shu, C.,Yi, G.,Chaton, C.T.,Shelton, C.L.,Diao, J.,Zuo, X.,Kao, C.C.,Herr, A.B.,Li, P. Cyclic GMP-AMP Synthase Is Activated by Double-Stranded DNA-Induced Oligomerization. Immunity 2013 39 1019 1031 4MHG 24333486 Crystal structure of ETV6 bound to a specific DNA sequence 2013-08-29 2014-01-08 De, S.,Chan, A.C.,Coyne, H.J.,Bhachech, N.,Hermsdorf, U.,Okon, M.,Murphy, M.E.,Graves, B.J.,McIntosh, L.P. Steric Mechanism of Auto-Inhibitory Regulation of Specific and Non-Specific DNA Binding by the ETS Transcriptional Repressor ETV6. J.Mol.Biol. 2014 426 1390 1406 4J14 23604141 Crystal Structure of Human Cytochrome P450 CYP46A1 with Posaconazole Bound 2013-01-31 2014-01-15 Mast, N.,Zheng, W.,Stout, C.D.,Pikuleva, I.A. Antifungal Azoles: Structural Insights into Undesired Tight Binding to Cholesterol-Metabolizing CYP46A1. Mol.Pharmacol. 2013 84 86 94 4N7L 24316146 Zinc Substituted Reaction Center M(L214H) Variant of Rhodobacter sphaeroides 2013-10-15 2014-01-22 Saer, R.G.,Pan, J.,Hardjasa, A.,Lin, S.,Rosell, F.,Mauk, A.G.,Woodbury, N.W.,Murphy, M.E.,Beatty, J.T. Structural and kinetic properties of Rhodobacter sphaeroides photosynthetic reaction centers containing exclusively Zn-coordinated bacteriochlorophyll as bacteriochlorin cofactors. Biochim.Biophys.Acta 2014 1837 366 374 4J16 Crystal structure of Thermus thermophilus transhydrogenase heterotrimeric complex of the Alpha1 subunit dimer with the NADP binding domain (domain III) of the Beta subunit 2013-02-01 2014-02-05 Yamaguchi, M.,Leung, J.,Schurig Briccio, L.A.,Gennis, R.B.,Stout, C.D. Crystal structure analysis of Thermus thermophilus transhydrogenase soluble domains To be Published 0 0 0 0 4J1T Crystal structure of Thermus thermophilus transhydrogenase heterotrimeric complex of the Alpha1 subunit dimer with the NADP binding domain (domain III) of the Beta subunit in P2(1) 2013-02-02 2014-02-05 Yamaguchi, M.,Leung, J.,Schurig Briccio, L.A.,Gennis, R.B.,Stout, C.D. Crystal structure analysis of Thermus thermophilus transhydrogenase soluble domains To be Published 0 0 0 0 4N7K 24316146 Zinc Substituted Reaction Center of the Rhodobacter sphaeroides 2013-10-15 2014-02-05 Saer, R.G.,Pan, J.,Hardjasa, A.,Lin, S.,Rosell, F.,Mauk, A.G.,Woodbury, N.W.,Murphy, M.E.,Beatty, J.T. Structural and kinetic properties of Rhodobacter sphaeroides photosynthetic reaction centers containing exclusively Zn-coordinated bacteriochlorophyll as bacteriochlorin cofactors. Biochim.Biophys.Acta 2013 1837 366 374 4KCH 24447275 Structure of neuronal nitric oxide synthase heme domain in complex with N,N'-([1,1'-biphenyl]-3,3'-diyl)bis(thiophene-2-carboximidamide) 2013-04-24 2014-02-12 Huang, H.,Li, H.,Yang, S.,Chreifi, G.,Martasek, P.,Roman, L.J.,Meyskens, F.L.,Poulos, T.L.,Silverman, R.B. Potent and Selective Double-Headed Thiophene-2-carboximidamide Inhibitors of Neuronal Nitric Oxide Synthase for the Treatment of Melanoma. J.Med.Chem. 2014 57 686 700 4KCI 24447275 Structure of neuronal nitric oxide synthase heme domain in complex with N,N'-(ethane-1,2-diylbis(3,1-phenylene))bis(thiophene-2-carboximidamide) 2013-04-24 2014-02-12 Huang, H.,Li, H.,Yang, S.,Chreifi, G.,Martasek, P.,Roman, L.J.,Meyskens, F.L.,Poulos, T.L.,Silverman, R.B. Potent and Selective Double-Headed Thiophene-2-carboximidamide Inhibitors of Neuronal Nitric Oxide Synthase for the Treatment of Melanoma. J.Med.Chem. 2014 57 686 700 4KCK 24447275 Structure of neuronal nitric oxide synthase heme domain in complex with N-(3-(2-((3-(thiophene-2-carboximidamido)benzyl)amino)ethyl)phenyl)thiophene-2-carboximidamide 2013-04-24 2014-02-12 Huang, H.,Li, H.,Yang, S.,Chreifi, G.,Martasek, P.,Roman, L.J.,Meyskens, F.L.,Poulos, T.L.,Silverman, R.B. Potent and Selective Double-Headed Thiophene-2-carboximidamide Inhibitors of Neuronal Nitric Oxide Synthase for the Treatment of Melanoma. J.Med.Chem. 2014 57 686 700 4KCL 24447275 Structure of neuronal nitric oxide synthase heme domain in complex with N-(4-(2-((3-(thiophene-2-carboximidamido)benzyl)amino)ethyl)phenyl)thiophene-2-carboximidamide 2013-04-24 2014-02-12 Huang, H.,Li, H.,Yang, S.,Chreifi, G.,Martasek, P.,Roman, L.J.,Meyskens, F.L.,Poulos, T.L.,Silverman, R.B. Potent and Selective Double-Headed Thiophene-2-carboximidamide Inhibitors of Neuronal Nitric Oxide Synthase for the Treatment of Melanoma. J.Med.Chem. 2014 57 686 700 4KCM 24447275 Structure of neuronal nitric oxide synthase heme domain in complex with N-(4-(2-(ethyl(3-(thiophene-2-carboximidamido)benzyl)amino)ethyl)phenyl)thiophene-2-carboximidamide 2013-04-24 2014-02-12 Huang, H.,Li, H.,Yang, S.,Chreifi, G.,Martasek, P.,Roman, L.J.,Meyskens, F.L.,Poulos, T.L.,Silverman, R.B. Potent and Selective Double-Headed Thiophene-2-carboximidamide Inhibitors of Neuronal Nitric Oxide Synthase for the Treatment of Melanoma. J.Med.Chem. 2014 57 686 700 4KCN 24447275 Structure of neuronal nitric oxide synthase heme domain in complex with N-(3-(((3-fluorophenethyl)amino)methyl)phenyl)thiophene-2-carboximidamide 2013-04-24 2014-02-12 Huang, H.,Li, H.,Yang, S.,Chreifi, G.,Martasek, P.,Roman, L.J.,Meyskens, F.L.,Poulos, T.L.,Silverman, R.B. Potent and Selective Double-Headed Thiophene-2-carboximidamide Inhibitors of Neuronal Nitric Oxide Synthase for the Treatment of Melanoma. J.Med.Chem. 2014 57 686 700 4KCO 24447275 Structure of neuronal nitric oxide synthase heme domain in complex with N-(3-((ethyl(3-fluorophenethyl)amino)methyl)phenyl)thiophene-2-carboximidamide 2013-04-24 2014-02-12 Huang, H.,Li, H.,Yang, S.,Chreifi, G.,Martasek, P.,Roman, L.J.,Meyskens, F.L.,Poulos, T.L.,Silverman, R.B. Potent and Selective Double-Headed Thiophene-2-carboximidamide Inhibitors of Neuronal Nitric Oxide Synthase for the Treatment of Melanoma. J.Med.Chem. 2014 57 686 700 4KCP 24447275 Structure of bovine endotheial nitric oxide synthase heme domain in complex with N-(4-(2-((3-(thiophene-2-carboximidamido)benzyl)amino)ethyl)phenyl)thiophene-2-carboximidamide 2013-04-24 2014-02-12 Huang, H.,Li, H.,Yang, S.,Chreifi, G.,Martasek, P.,Roman, L.J.,Meyskens, F.L.,Poulos, T.L.,Silverman, R.B. Potent and Selective Double-Headed Thiophene-2-carboximidamide Inhibitors of Neuronal Nitric Oxide Synthase for the Treatment of Melanoma. J.Med.Chem. 2014 57 686 700 4KCQ 24447275 Structure of bovine endothelial nitric oxide synthase heme domain in complex with N-(4-(2-(ethyl(3-(thiophene-2-carboximidamido)benzyl)amino)ethyl)phenyl)thiophene-2-carboximidamide 2013-04-24 2014-02-12 Huang, H.,Li, H.,Yang, S.,Chreifi, G.,Martasek, P.,Roman, L.J.,Meyskens, F.L.,Poulos, T.L.,Silverman, R.B. Potent and Selective Double-Headed Thiophene-2-carboximidamide Inhibitors of Neuronal Nitric Oxide Synthase for the Treatment of Melanoma. J.Med.Chem. 2014 57 686 700 4KCR 24447275 Structure of bovine endothelial nitric oxide synthase heme domain in complex with N-(3-(((3-fluorophenethyl)amino)methyl)phenyl)thiophene-2-carboximidamide 2013-04-24 2014-02-12 Huang, H.,Li, H.,Yang, S.,Chreifi, G.,Martasek, P.,Roman, L.J.,Meyskens, F.L.,Poulos, T.L.,Silverman, R.B. Potent and Selective Double-Headed Thiophene-2-carboximidamide Inhibitors of Neuronal Nitric Oxide Synthase for the Treatment of Melanoma. J.Med.Chem. 2014 57 686 700 4KCS 24447275 Structure of bovine endothelial nitric oxide synthase heme domain in complex with N-(3-((ethyl(3-fluorophenethyl)amino)methyl)phenyl)thiophene-2-carboximidamide 2013-04-24 2014-02-12 Huang, H.,Li, H.,Yang, S.,Chreifi, G.,Martasek, P.,Roman, L.J.,Meyskens, F.L.,Poulos, T.L.,Silverman, R.B. Potent and Selective Double-Headed Thiophene-2-carboximidamide Inhibitors of Neuronal Nitric Oxide Synthase for the Treatment of Melanoma. J.Med.Chem. 2014 57 686 700 4O0R 24432870 Back pocket flexibility provides group-II PAK selectivity for type 1 kinase inhibitors 2013-12-14 2014-02-12 Staben, S.T.,Feng, J.A.,Lyle, K.,Belvin, M.,Boggs, J.,Burch, J.D.,Chua, C.C.,Cui, H.,Dipasquale, A.G.,Friedman, L.S.,Heise, C.,Koeppen, H.,Kotey, A.,Mintzer, R.,Oh, A.,Roberts, D.A.,Rouge, L.,Rudolph, J.,Tam, C.,Wang, W.,Xiao, Y.,Young, A.,Zhang, Y.,Hoeflich, K.P. Back Pocket Flexibility Provides Group II p21-Activated Kinase (PAK) Selectivity for Type I 1/2 Kinase Inhibitors. J.Med.Chem. 2014 57 1033 1045 4CAR 24472039 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 7-((3-Fluorophenethylamino)methyl)quinolin-2-amine 2013-10-08 2014-02-19 Cinelli, M.A.,Li, H.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Simplified 2-Aminoquinoline-Based Scaffold for Potent and Selective Neuronal Nitric Oxide Synthase Inhibition. J.Med.Chem. 2014 57 1513 0 4JF8 26646013 Crystal structure of a TrwG component of type IV secretion system protein from Bartonella birtlesii 2013-02-27 2014-03-05 Gillespie, J.J.,Phan, I.Q.,Scheib, H.,Subramanian, S.,Edwards, T.E.,Lehman, S.S.,Piitulainen, H.,Rahman, M.S.,Rennoll-Bankert, K.E.,Staker, B.L.,Taira, S.,Stacy, R.,Myler, P.J.,Azad, A.F.,Pulliainen, A.T. Structural Insight into How Bacteria Prevent Interference between Multiple Divergent Type IV Secretion Systems. MBio 2015 6 0 0 4MP3 24485762 Staphyloferrin B precursor biosynthetic enzyme selenomethionine-labeled SbnB 2013-09-12 2014-03-05 Kobylarz, M.J.,Grigg, J.C.,Takayama, S.J.,Rai, D.K.,Heinrichs, D.E.,Murphy, M.E. Synthesis of L-2,3-diaminopropionic Acid, a siderophore and antibiotic precursor. Chem.Biol. 2014 21 379 388 4MP6 24485762 Staphyloferrin B precursor biosynthetic enzyme SbnB bound to citrate and NAD+ 2013-09-12 2014-03-05 Kobylarz, M.J.,Grigg, J.C.,Takayama, S.J.,Rai, D.K.,Heinrichs, D.E.,Murphy, M.E. Synthesis of L-2,3-diaminopropionic Acid, a siderophore and antibiotic precursor. Chem.Biol. 2014 21 379 388 4MP8 24485762 Staphyloferrin B precursor biosynthetic enzyme SbnB bound to malonate and NAD+ 2013-09-12 2014-03-05 Kobylarz, M.J.,Grigg, J.C.,Takayama, S.J.,Rai, D.K.,Heinrichs, D.E.,Murphy, M.E. Synthesis of L-2,3-diaminopropionic Acid, a siderophore and antibiotic precursor. Chem.Biol. 2014 21 379 388 4C3A 24660051 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 6-((((3S, 5R)-5-(((6-amino-4-methylpyridin-2-yl)methoxy) methyl)pyrrolidin-3-yl)oxy) methyl)-4-methylpyridin-2-amine 2013-08-22 2014-04-02 Jing, Q.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. An Accessible Chiral Linker to Enhance Potency and Selectivity of Neuronal Nitric Oxide Synthase Inhibitors. Acs Med.Chem.Lett. 2014 5 56 0 4H8W 25165110 Crystal structure of non-neutralizing and ADCC-potent antibody N5-i5 in complex with HIV-1 clade A/E gp120 and sCD4. 2012-09-24 2014-04-09 Acharya, P.,Tolbert, W.D.,Gohain, N.,Wu, X.,Yu, L.,Liu, T.,Huang, W.,Huang, C.C.,Kwon, Y.D.,Louder, R.K.,Luongo, T.S.,McLellan, J.S.,Pancera, M.,Yang, Y.,Zhang, B.,Flinko, R.,Foulke, J.S.,Sajadi, M.M.,Kamin-Lewis, R.,Robinson, J.E.,Martin, L.,Kwong, P.D.,Guan, Y.,DeVico, A.L.,Lewis, G.K.,Pazgier, M. Structural Definition of an Antibody-Dependent Cellular Cytotoxicity Response Implicated in Reduced Risk for HIV-1 Infection. J.Virol. 2014 88 12895 12906 4OXX 24533927 Crystal Structure of Cindoxin, Surface Entropy reduction Mutant 2014-02-07 2014-04-16 Madrona, Y.,Hollingsworth, S.A.,Tripathi, S.,Fields, J.B.,Rwigema, J.C.,Tobias, D.J.,Poulos, T.L. Crystal structure of cindoxin, the P450cin redox partner. Biochemistry 2014 53 1435 1446 4MJC 24298277 Synechocystis sp. PCC 6803 glutaredoxin A - P84R 2013-09-03 2014-04-30 Knaff, D.B.,Sutton, R.B. Utility of Synechocystis sp. PCC 6803 glutaredoxin A as a platform to study high-resolution mutagenesis of proteins. Front Plant Sci 2013 4 461 461 4CTQ 24758147 Structure of rat neuronal nitric oxide synthase heme domain in complex with (R)-6-(2-Amino-2-(3-(2-(6-amino-4-methylpyridin-2-yl) ethyl)phenyl)ethyl)-4-methylpyridin-2-amine 2014-03-15 2014-05-07 Kang, S.,Tang, W.,Li, H.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Nitric Oxide Synthase Inhibitors that Interact with Both a Heme Propionate and Tetrahydrobiopterin Show High Isoform Selectivity. J.Med.Chem. 2014 57 4382 0 4CTR 24758147 Structure of rat neuronal nitric oxide synthase heme domain in complex with 2-(6-Amino-4-methylpyridin-2-yl)-1-(3-(2-(6-amino-4- methylpyridin-2-yl)ethyl )phenyl)ethan-1-ol 2014-03-15 2014-05-07 Kang, S.,Tang, W.,Li, H.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Nitric Oxide Synthase Inhibitors that Interact with Both a Heme Propionate and Tetrahydrobiopterin Show High Isoform Selectivity. J.Med.Chem. 2014 57 4382 0 4CTW 24758147 Structure of rat neuronal nitric oxide synthase heme domain in complex with (R)-6-(3-amino-2-(5-(2-(6-amino-4-methylpyridin-2-yl) ethyl)pyridin-3-yl)propyl)-4-methylpyridin-2-amine 2014-03-15 2014-05-07 Kang, S.,Tang, W.,Li, H.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Nitric Oxide Synthase Inhibitors that Interact with Both a Heme Propionate and Tetrahydrobiopterin Show High Isoform Selectivity. J.Med.Chem. 2014 57 4382 0 4MIA 24195700 Hepatitis C Virus polymerase NS5B genotype 1b (BK) in complex with RG7109 (N-{4-[6-tert-butyl-5-methoxy-8-(6-methoxy-2-oxo-2,5-dihydropyridin-3-yl)quinolin-3-yl]phenyl}methanesulfonamide) 2013-08-30 2014-05-07 Talamas, F.X.,Abbot, S.C.,Anand, S.,Brameld, K.A.,Carter, D.S.,Chen, J.,Davis, D.,de Vicente, J.,Fung, A.D.,Gong, L.,Harris, S.F.,Inbar, P.,Labadie, S.S.,Lee, E.K.,Lemoine, R.,Le Pogam, S.,Leveque, V.,Li, J.,McIntosh, J.,Najera, I.,Park, J.,Railkar, A.,Rajyaguru, S.,Sangi, M.,Schoenfeld, R.C.,Staben, L.R.,Tan, Y.,Taygerly, J.P.,Villasenor, A.G.,Weller, P.E. Discovery of N-[4-[6-tert-butyl-5-methoxy-8-(6-methoxy-2-oxo-1H-pyridin-3-yl)-3-quinolyl]phenyl]methanesulfonamide (RG7109), a potent inhibitor of the hepatitis C virus NS5B polymerase. J.Med.Chem. 2014 57 1914 1931 4KKY Crystal structure of N-(1-Pyrene)acetamide labeled P450cam in substrate bound form. 2013-05-06 2014-05-21 Zhang, M.,Goodin, D.B. To be determined. To be Published 0 0 0 0 4CUL 24819538 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 6-acetyl-2-amino-7,7-dimethyl-7,8-dihydropteridin-4(3H)-one 2014-03-20 2014-05-28 Chreifi, G.,Li, H.,Mcinnes, C.R.,Gibson, C.L.,Suckling, C.J.,Poulos, T.L. Communication between the Zinc and Tetrahydrobiopterin Binding Sites in Nitric Oxide Synthase. Biochemistry 2014 53 4216 0 4CUM 24819538 Structure of bovine endothelial nitric oxide synthase heme domain in complex with (9aS)-2-amino-9a-methyl-6,7,8,9,9a,10-hexahydrobenzo[g]pteridin-4(3H)-one 2014-03-20 2014-05-28 Chreifi, G.,Li, H.,Mcinnes, C.R.,Gibson, C.L.,Suckling, C.J.,Poulos, T.L. Communication between the Zinc and Tetrahydrobiopterin Binding Sites in Nitric Oxide Synthase. Biochemistry 2014 53 4216 0 4CUN 24819538 Structure of bovine endothelial nitric oxide synthase heme domain in complex with (9aS)-2-amino-9a-methyl-8,9,9a,10-tetrahydrobenzo[g]pteridine-4,6(3H,7H)-dione 2014-03-20 2014-05-28 Chreifi, G.,Li, H.,Mcinnes, C.R.,Gibson, C.L.,Suckling, C.J.,Poulos, T.L. Communication between the Zinc and Tetrahydrobiopterin Binding Sites in Nitric Oxide Synthase. Biochemistry 2014 53 4216 0 4O12 24797455 Structural and Biochemical Analyses of the Catalysis and Potency Impact of Inhibitor Phosphoribosylation by Human Nicotinamide Phosphoribosyltransferase 2013-12-14 2014-06-18 Oh, A.,Ho, Y.C.,Zak, M.,Liu, Y.,Chen, X.,Yuen, P.W.,Zheng, X.,Liu, Y.,Dragovich, P.S.,Wang, W. Structural and biochemical analyses of the catalysis and potency impact of inhibitor phosphoribosylation by human nicotinamide phosphoribosyltransferase. Chembiochem 2014 15 1121 1130 4OOF 24825256 M. tuberculosis 1-deoxy-d-xylulose-5-phosphate reductoisomerase W203F mutant bound to fosmidomycin and NADPH 2014-01-31 2014-06-18 Kholodar, S.A.,Tombline, G.,Liu, J.,Tan, Z.,Allen, C.L.,Gulick, A.M.,Murkin, A.S. Alteration of the Flexible Loop in 1-Deoxy-d-xylulose-5-phosphate Reductoisomerase Boosts Enthalpy-Driven Inhibition by Fosmidomycin. Biochemistry 2014 53 3423 3431 4QGR Crystal structure of a DegT DnrJ EryC1 StrS aminotransferase from Brucella abortus 2014-05-23 2014-06-18 Edwards, T.E.,Fairman, J.W.,Letesson, J.J.,Seattle Structural Genomics Center for Infectious Disease Crystal structure of a DegT DnrJ EryC1 StrS family protein from Bartonella abortus TO BE PUBLISHED 0 0 0 0 4N02 24910111 Type 2 IDI from S. pneumoniae 2013-09-30 2014-07-02 de Ruyck, J.,Janczak, M.W.,Neti, S.S.,Rothman, S.C.,Schubert, H.L.,Cornish, R.M.,Matagne, A.,Wouters, J.,Poulter, C.D. Determination of Kinetics and the Crystal Structure of a Novel Type 2 Isopentenyl Diphosphate: Dimethylallyl Diphosphate Isomerase from Streptococcus pneumoniae. Chembiochem 2014 15 1452 1458 4NFO 24896732 Crystal Structure Analysis of the 16mer GCAGACUUAAGUCUGC 2013-10-31 2014-07-02 Phelps, K.J.,Ibarra-Soza, J.M.,Tran, K.,Fisher, A.J.,Beal, P.A. Click Modification of RNA at Adenosine: Structure and Reactivity of 7-Ethynyl- and 7-Triazolyl-8-aza-7-deazaadenosine in RNA. Acs Chem.Biol. 2014 9 1780 1787 4NFP 24896732 Crystal Structure Analysis of the 16mer GCAGNCUUAAGUCUGC containing 8-aza-7-deaza-7-ethynyl Adenosine 2013-10-31 2014-07-02 Phelps, K.J.,Ibarra-Soza, J.M.,Tran, K.,Fisher, A.J.,Beal, P.A. Click Modification of RNA at Adenosine: Structure and Reactivity of 7-Ethynyl- and 7-Triazolyl-8-aza-7-deazaadenosine in RNA. Acs Chem.Biol. 2014 9 1780 1787 4NFQ 24896732 Crystal Structure Analysis of the 16mer GCAGNCUUAAGUCUGC containing 7-triazolyl-8-aza-7-deazaadenosine 2013-10-31 2014-07-02 Phelps, K.J.,Ibarra-Soza, J.M.,Tran, K.,Fisher, A.J.,Beal, P.A. Click Modification of RNA at Adenosine: Structure and Reactivity of 7-Ethynyl- and 7-Triazolyl-8-aza-7-deazaadenosine in RNA. Acs Chem.Biol. 2014 9 1780 1787 4TM5 X-ray crystal structure of a D-amino acid aminotransferase from Burkholderia thailandensis E264 bound to the co-factor pyridoxal phosphate 2014-05-31 2014-07-02 Fairman, J.W.,Taylor, B.M.,Edwards, T.E.,Lorimer, D. X-ray crystal structure of a D-amino acid aminotransferase from Burkholderia thailandensis E264 bound to the co-factor pyridoxal phosphate To Be Published 0 0 0 0 4V9N 23769667 Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2. 2013-04-26 2014-07-09 Santos, N.,Zhu, J.,Donohue, J.P.,Korostelev, A.A.,Noller, H.F. Crystal Structure of the 70S Ribosome Bound with the Q253P Mutant Form of Release Factor RF2. Structure 2013 21 1258 1263 4QFD 25001371 Co-crystal structure of compound 2 (3-(7-hydroxy-2-oxo-4-phenyl-2H-chromen-6-yl)propanoic acid) and FAD bound to human DAAO at 2.85A 2014-05-20 2014-07-16 Terry-Lorenzo, R.T.,Chun, L.E.,Brown, S.P.,Heffernan, M.L.,Fang, Q.K.,Orsini, M.A.,Pollegioni, L.,Hardy, L.W.,Spear, K.L.,Large, T.H. Novel human D-amino acid oxidase inhibitors stabilize an active-site lid-open conformation. Biosci.Rep. 2014 34 0 0 4U5T 22851716 Crystal Structure of VBP Leucine Zipper with Bound Arylstibonic Acid 2014-07-25 2014-08-06 Zhao, J.,Stagno, J.R.,Varticovski, L.,Nimako, E.,Rishi, V.,McKinnon, K.,Akee, R.,Shoemaker, R.H.,Ji, X.,Vinson, C. P6981, an arylstibonic acid, is a novel low nanomolar inhibitor of cAMP response element-binding protein binding to DNA. Mol.Pharmacol. 2012 82 814 823 4CWV 25089924 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 4-METHYL-6-(((3R,4R)-4-((5-(PYRIDIN-2-YL)PENTYL)OXY) PYRROLIDIN-3-YL)METHYL)PYRIDIN-2-AMINE 2014-04-03 2014-08-13 Li, H.,Jamal, J.,Delker, S.L.,Plaza, C.,Ji, H.,Jing, Q.,Huang, H.,Kang, S.,Silverman, R.B.,Poulos, T.L. Mobility of a Conserved Tyrosine Residue Controls Isoform-Dependent Enzyme-Inhibitor Interactions in Nitric Oxide Synthases. Biochemistry 2014 53 5272 0 4CWW 25089924 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 4-METHYL-6-(((3R,4R)-4-((5-(4-METHYLPYRIDIN-2-YL)PENTYL) OXY)PYRROLIDIN-3-YL)METHYL)PYRIDIN-2-AMINE 2014-04-03 2014-08-13 Li, H.,Jamal, J.,Delker, S.L.,Plaza, C.,Ji, H.,Jing, Q.,Huang, H.,Kang, S.,Silverman, R.B.,Poulos, T.L. Mobility of a Conserved Tyrosine Residue Controls Isoform-Dependent Enzyme-Inhibitor Interactions in Nitric Oxide Synthases. Biochemistry 2014 53 5272 0 4CX1 25089924 Structure of bovine endothelial nitric oxide synthase L111A mutant heme domain in complex with 4-METHYL-6-(((3R,4R)-4-((5-(4- METHYLPYRIDIN-2-YL)PENTYL)OXY)PYRROLIDIN-3-YL)METHYL)PYRIDIN-2-AMINE 2014-04-03 2014-08-13 Li, H.,Jamal, J.,Delker, S.L.,Plaza, C.,Ji, H.,Jing, Q.,Huang, H.,Kang, S.,Silverman, R.B.,Poulos, T.L. Mobility of a Conserved Tyrosine Residue Controls Isoform-Dependent Enzyme-Inhibitor Interactions in Nitric Oxide Synthases. Biochemistry 2014 53 5272 0 4CX2 25089924 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 6-(5-(((3R,4R)-4-((6-AMINO-4-METHYLPYRIDIN-2-YL)METHYL) PYRROLIDIN-3-YL)OXY)PENTYL)-4-METHYLPYRIDIN-2-AMINE 2014-04-03 2014-08-13 Li, H.,Jamal, J.,Delker, S.L.,Plaza, C.,Ji, H.,Jing, Q.,Huang, H.,Kang, S.,Silverman, R.B.,Poulos, T.L. Mobility of a Conserved Tyrosine Residue Controls Isoform-Dependent Enzyme-Inhibitor Interactions in Nitric Oxide Synthases. Biochemistry 2014 53 5272 0 4CX3 25089924 Structure of rat neuronal nitric oxide synthase M336V D597N mutant heme domain in complex with 4-METHYL-6-(((3R,4R)-4-((5-(PYRIDIN-2-YL) PENTYL)OXY)PYRROLIDIN-3-YL)METHYL)PYRIDIN-2-AMINE 2014-04-03 2014-08-13 Li, H.,Jamal, J.,Delker, S.L.,Plaza, C.,Ji, H.,Jing, Q.,Huang, H.,Kang, S.,Silverman, R.B.,Poulos, T.L. Mobility of a Conserved Tyrosine Residue Controls Isoform-Dependent Enzyme-Inhibitor Interactions in Nitric Oxide Synthases. Biochemistry 2014 53 5272 0 4CX4 25089924 Structure of rat neuronal nitric oxide synthase M336V D597N mutant heme domain in complex with 4-METHYL-6-(((3R,4R)-4-((5-(4- METHYLPYRIDIN-2-YL)PENTYL)OXY)PYRROLIDIN-3-YL)METHYL)PYRIDIN-2-AMINE 2014-04-03 2014-08-13 Li, H.,Jamal, J.,Delker, S.L.,Plaza, C.,Ji, H.,Jing, Q.,Huang, H.,Kang, S.,Silverman, R.B.,Poulos, T.L. Mobility of a Conserved Tyrosine Residue Controls Isoform-Dependent Enzyme-Inhibitor Interactions in Nitric Oxide Synthases. Biochemistry 2014 53 5272 0 4CX5 25089924 Structure of rat neuronal nitric oxide synthase H341L mutant heme domain in complex with 4-METHYL-6-(((3R,4R)-4-((5-(PYRIDIN-2-YL) PENTYL)OXY)PYRROLIDIN-3-YL)METHYL)PYRIDIN-2-AMINE 2014-04-03 2014-08-13 Li, H.,Jamal, J.,Delker, S.L.,Plaza, C.,Ji, H.,Jing, Q.,Huang, H.,Kang, S.,Silverman, R.B.,Poulos, T.L. Mobility of a Conserved Tyrosine Residue Controls Isoform-Dependent Enzyme-Inhibitor Interactions in Nitric Oxide Synthases. Biochemistry 2014 53 5272 0 4CX6 25089924 Structure of rat neuronal nitric oxide synthase H341L mutant heme domain in complex with 6-((((3S, 5R)-5-(((6-AMINO-4-METHYLPYRIDIN-2- YL)METHOXY)METHYL)PYRROLIDIN-3-YL)OXY)METHYL)-4-METHYLPYRIDIN-2-AMINE 2014-04-03 2014-08-13 Li, H.,Jamal, J.,Delker, S.L.,Plaza, C.,Ji, H.,Jing, Q.,Huang, H.,Kang, S.,Silverman, R.B.,Poulos, T.L. Mobility of a Conserved Tyrosine Residue Controls Isoform-Dependent Enzyme-Inhibitor Interactions in Nitric Oxide Synthases. Biochemistry 2014 53 5272 0 4Q8D 25068693 Crystal structure of a macrocyclic beta-sheet peptide containing two beta-strands from amyloid beta residues 15-23 2014-04-26 2014-08-13 Pham, J.D.,Spencer, R.K.,Chen, K.H.,Nowick, J.S. A Fibril-Like Assembly of Oligomers of a Peptide Derived from beta-Amyloid. J.Am.Chem.Soc. 2014 136 12682 12690 4UPO 25149509 Structure of rat neuronal nitric oxide synthase heme domain in complex with N-[3-({[(3S,5S)-5-{[(3-{[(Z)-imino(thiophen-2-yl)methyl]amino}benzyl)oxy]methyl}pyrrolidin-3-yl]oxy}methyl)phenyl]thiophene-2-carboximidamide 2014-06-17 2014-08-20 Jing, Q.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Combination of Chiral Linkers with Thiophenecarboximidamide Heads to Improve the Selectivity of Inhibitors of Neuronal Nitric Oxide Synthase. Bioorg.Med.Chem.Lett. 2014 24 4504 0 4UPP 25149509 Structure of rat neuronal nitric oxide synthase heme domain in complex with N'-[4-[[(2S,4R)-4-[3-[(C-thiophen-2-ylcarbonimidoyl)amino]phenoxy]pyrrolidin-2-yl]methoxy]phenyl]thiophene-2-carboximidamide 2014-06-17 2014-08-20 Jing, Q.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Combination of Chiral Linkers with Thiophenecarboximidamide Heads to Improve the Selectivity of Inhibitors of Neuronal Nitric Oxide Synthase. Bioorg.Med.Chem.Lett. 2014 24 4504 0 4UPQ 25149509 Structure of bovine endothelial nitric oxide synthase heme domain in complex with N',N'-{[(2R)-3-aminopropane-1,2-diyl]bis(oxymethanediylbenzene-3,1-diyl)}dithiophene-2-carboximidamide 2014-06-17 2014-08-20 Jing, Q.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Combination of Chiral Linkers with Thiophenecarboximidamide Heads to Improve the Selectivity of Inhibitors of Neuronal Nitric Oxide Synthase. Bioorg.Med.Chem.Lett. 2014 24 4504 0 4Q7Z 25156428 Neutrophil serine protease 4 (PRSS57) with phe-phe-arg-chloromethylketone (FFR-cmk) 2014-04-25 2014-09-03 Lin, S.J.,Dong, K.C.,Eigenbrot, C.,van Lookeren Campagne, M.,Kirchhofer, D. Structures of neutrophil serine protease 4 reveal an unusual mechanism of substrate recognition by a trypsin-fold protease. Structure 2014 22 1333 1340 4TU1 25195889 Structure of Toxoplasma gondii fructose 1,6 bisphosphate aldolase 2014-06-23 2014-09-03 Boucher, L.E.,Bosch, J. Structure of Toxoplasma gondii fructose-1,6-bisphosphate aldolase. Acta Crystallogr.,Sect.F 2014 70 1186 1192 4UQR 25194416 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N-omega-Nitro-L-Arginine 2014-06-24 2014-09-17 Holden, J.K.,Lim, N.,Poulos, T.L. Identification of Redox Partners and Development of a Novel Chimeric Bacterial Nitric Oxide Synthase for Structure Activity Analyses. J.Biol.Chem. 2014 289 29437 0 4PJV 25195882 Structure of PARP2 catalytic domain bound to inhibitor BMN 673 2014-05-12 2014-09-24 Aoyagi-Scharber, M.,Gardberg, A.S.,Yip, B.K.,Wang, B.,Shen, Y.,Fitzpatrick, P.A. Structural basis for the inhibition of poly(ADP-ribose) polymerases 1 and 2 by BMN 673, a potent inhibitor derived from dihydropyridophthalazinone. Acta Crystallogr.,Sect.F 2014 70 1143 1149 4RA0 25242553 An engineered Axl 'decoy receptor' effectively silences the Gas6-Axl signaling axis 2014-09-09 2014-09-24 Kariolis, M.S.,Miao, Y.R.,Jones, D.S.,Kapur, S.,Mathews, I.I.,Giaccia, A.J.,Cochran, J.R. An engineered Axl 'decoy receptor' effectively silences the Gas6-Axl signaling axis. Nat.Chem.Biol. 2014 10 977 983 4PFJ 25248746 The structure of bi-acetylated SAHH 2014-04-29 2014-10-01 Wang, Y.,Kavran, J.M.,Chen, Z.,Karukurichi, K.R.,Leahy, D.J.,Cole, P.A. Regulation of s-adenosylhomocysteine hydrolase by lysine acetylation. J.Biol.Chem. 2014 289 31361 31372 4PGF 25248746 The structure of mono-acetylated SAHH 2014-05-01 2014-10-01 Wang, Y.,Kavran, J.M.,Chen, Z.,Karukurichi, K.R.,Leahy, D.J.,Cole, P.A. Regulation of s-adenosylhomocysteine hydrolase by lysine acetylation. J.Biol.Chem. 2014 289 31361 31372 4N4Y Structure of Recombinant Cytochrome ba3 Oxidase mutant G232V from Thermus thermophilus 2013-10-08 2014-10-08 Li, Y.,Chen, Y.,Stout, C.D. Structure of Recombinant Cytochrome ba3 Oxidase mutant G232V from Thermus thermophilus To be Published 0 0 0 0 4RCH 25203462 Discovery of 2-Pyridyl Ureas as Glucokinase Activators 2014-09-16 2014-10-08 Hinklin, R.J.,Aicher, T.D.,Anderson, D.A.,Baer, B.R.,Boyd, S.A.,Condroski, K.R.,DeWolf, W.E.,Kraser, C.F.,McVean, M.,Rhodes, S.P.,Sturgis, H.L.,Voegtli, W.C.,Williams, L.,Houze, J.B. Discovery of 2-pyridylureas as glucokinase activators. J.Med.Chem. 2014 57 8180 8186 4D1N 25286850 Structure of human nNOS heme domain with L-Arg bound 2014-05-02 2014-10-15 Li, H.,Jamal, J.,Plaza, C.,Pineda, S.H.,Chreifi, G.,Jing, Q.,Cinelli, M.A.,Silverman, R.B.,Poulos, T.L. Structures of Human Constitutive Nitric Oxide Synthases Acta Crystallogr.,Sect.D 2014 70 2667 0 4PE1 25268459 Crystal Structure of Calcium-loaded S100B bound to SC124 2014-04-22 2014-10-15 Cavalier, M.C.,Pierce, A.D.,Wilder, P.T.,Alasady, M.J.,Hartman, K.G.,Neau, D.B.,Foley, T.L.,Jadhav, A.,Maloney, D.J.,Simeonov, A.,Toth, E.A.,Weber, D.J. Covalent Small Molecule Inhibitors of Ca(2+)-Bound S100B. Biochemistry 2014 53 6628 6640 4PE7 25268459 Crystal Structure of Calcium-loaded S100B bound to SC1982 2014-04-22 2014-10-15 Cavalier, M.C.,Pierce, A.D.,Wilder, P.T.,Alasady, M.J.,Hartman, K.G.,Neau, D.B.,Foley, T.L.,Jadhav, A.,Maloney, D.J.,Simeonov, A.,Toth, E.A.,Weber, D.J. Covalent Small Molecule Inhibitors of Ca(2+)-Bound S100B. Biochemistry 2014 53 6628 6640 4R0R 25287718 Ebolavirus GP Prehairpin Intermediate Mimic 2014-08-01 2014-10-22 Clinton, T.R.,Weinstock, M.T.,Jacobsen, M.T.,Szabo-Fresnais, N.,Pandya, M.J.,Whitby, F.G.,Herbert, A.S.,Prugar, L.I.,McKinnon, R.,Hill, C.P.,Welch, B.D.,Dye, J.M.,Eckert, D.M.,Kay, M.S. Design and characterization of ebolavirus GP prehairpin intermediate mimics as drug targets. Protein Sci. 2015 24 446 463 4TV5 25336653 Crystal Structure of Citrate Synthase SbnG 2014-06-25 2014-10-29 Kobylarz, M.J.,Grigg, J.C.,Sheldon, J.R.,Heinrichs, D.E.,Murphy, M.E. SbnG, a Citrate Synthase in Staphylococcus aureus: A NEW FOLD ON AN OLD ENZYME. J.Biol.Chem. 2014 289 33797 33807 4PE0 25268459 Crystal Structure of Calcium-loaded S100B bound to SBi4434 2014-04-22 2014-11-05 Cavalier, M.C.,Pierce, A.D.,Wilder, P.T.,Alasady, M.J.,Hartman, K.G.,Neau, D.B.,Foley, T.L.,Jadhav, A.,Maloney, D.J.,Simeonov, A.,Toth, E.A.,Weber, D.J. Covalent Small Molecule Inhibitors of Ca(2+)-Bound S100B. Biochemistry 2014 53 6628 6640 4TZQ 25446517 Structure of C. elegans HTP-1 bound to HTP-3 motif-1 2014-07-10 2014-11-19 Kim, Y.,Rosenberg, S.C.,Kugel, C.L.,Kostow, N.,Rog, O.,Davydov, V.,Su, T.Y.,Dernburg, A.F.,Corbett, K.D. The Chromosome Axis Controls Meiotic Events through a Hierarchical Assembly of HORMA Domain Proteins. Dev.Cell 2014 31 487 502 4N79 25422423 Structure of Cathepsin K-dermatan sulfate complex 2013-10-15 2014-11-26 Aguda, A.H.,Panwar, P.,Du, X.,Nguyen, N.T.,Brayer, G.D.,Bromme, D. Structural basis of collagen fiber degradation by cathepsin K. Proc.Natl.Acad.Sci.USA 2014 111 17474 17479 4N8W 25422423 cathepsin K - chondroitin sulfate complex 2013-10-18 2014-11-26 Aguda, A.H.,Panwar, P.,Du, X.,Nguyen, N.T.,Brayer, G.D.,Bromme, D. Structural basis of collagen fiber degradation by cathepsin K. Proc.Natl.Acad.Sci.USA 2014 111 17474 17479 4TTB 25395621 Crystal structure of homo sapiens IODOTYROSINE DEIODINASE (IYD) bound to FMN 2014-06-20 2014-11-26 Hu, J.,Chuenchor, W.,Rokita, S.E. A Switch between One- and Two-electron Chemistry of the Human Flavoprotein Iodotyrosine Deiodinase Is Controlled by Substrate. J.Biol.Chem. 2015 290 590 600 4TTC 25395621 Crystal structure of homo sapiens IODOTYROSINE DEIODINASE bound to FMN and mono-iodotyrosine (MIT) 2014-06-20 2014-11-26 Hu, J.,Chuenchor, W.,Rokita, S.E. A Switch between One- and Two-electron Chemistry of the Human Flavoprotein Iodotyrosine Deiodinase Is Controlled by Substrate. J.Biol.Chem. 2015 290 590 600 4OJN 25664730 Crystal structure of human muscle L-lactate dehydrogenase 2014-01-21 2014-12-03 Kolappan, S.,Shen, D.L.,Mosi, R.,Sun, J.,McEachern, E.J.,Vocadlo, D.J.,Craig, L. Structures of lactate dehydrogenase A (LDHA) in apo, ternary and inhibitor-bound forms. Acta Crystallogr.,Sect.D 2015 71 185 195 4OKN 25664730 Crystal structure of human muscle L-lactate dehydrogenase, ternary complex with NADH and oxalate 2014-01-22 2014-12-03 Kolappan, S.,Shen, D.L.,Mosi, R.,Sun, J.,McEachern, E.J.,Vocadlo, D.J.,Craig, L. Structures of lactate dehydrogenase A (LDHA) in apo, ternary and inhibitor-bound forms. Acta Crystallogr.,Sect.D 2015 71 185 195 4QSM 25664730 Crystal structure of human muscle L-lactate dehydrogenase in complex with inhibitor 2, 3-{[7-(2,4-dimethoxypyrimidin-5-yl)-3-sulfamoylquinolin-4-yl]amino}benzoic acid 2014-07-06 2014-12-03 Kolappan, S.,Shen, D.L.,Mosi, R.,Sun, J.,McEachern, E.J.,Vocadlo, D.J.,Craig, L. Structures of lactate dehydrogenase A (LDHA) in apo, ternary and inhibitor-bound forms. Acta Crystallogr.,Sect.D 2015 71 185 195 4QT0 25664730 Crystal structure of human muscle L-lactate dehydrogenase in complex with inhibitor 1, 3-{[3-CARBAMOYL-7-(2,4-DIMETHOXYPYRIMIDIN-5-YL)QUINOLIN-4-YL]AMINO}BENZOIC ACID 2014-07-06 2014-12-03 Kolappan, S.,Shen, D.L.,Mosi, R.,Sun, J.,McEachern, E.J.,Vocadlo, D.J.,Craig, L. Structures of lactate dehydrogenase A (LDHA) in apo, ternary and inhibitor-bound forms. Acta Crystallogr.,Sect.D 2015 71 185 195 4R9V 25451227 Crystal structure of sialyltransferase from photobacterium damselae, residues 113-497 corresponding to the gt-b domain 2014-09-08 2014-12-03 Huynh, N.,Li, Y.,Yu, H.,Huang, S.,Lau, K.,Chen, X.,Fisher, A.J. Crystal structures of sialyltransferase from Photobacterium damselae. Febs Lett. 2014 588 4720 4729 4RJE 25423902 Aerococcus viridans L-lactate oxidase mutant 2014-10-08 2014-12-03 Stoisser, T.,Rainer, D.,Leitgeb, S.,Wilson, D.K.,Nidetzky, B. The Ala95-to-Gly substitution in Aerococcus viridans l-lactate oxidase revisited - structural consequences at the catalytic site and effect on reactivity with O2 and other electron acceptors. Febs J. 2015 282 562 578 4WNI 25451934 Crystal structure of the T229K mutant of human GAPDH at 2.3 angstroems resolution 2014-10-12 2014-12-03 White, M.R.,Khan, M.M.,Deredge, D.,Ross, C.R.,Quintyn, R.,Zucconi, B.E.,Wysocki, V.H.,Wintrode, P.L.,Wilson, G.M.,Garcin, E.D. A Dimer Interface Mutation in Glyceraldehyde-3-Phosphate Dehydrogenase Regulates Its Binding to AU-rich RNA. J.Biol.Chem. 2015 290 1770 1785 4M0I CRYSTAL STRUCTURE OF SYNTHETIC HIV-1 CAPSID C-TERMINAL DOMAIN (CTD) C198S mutant 2013-08-01 2014-12-17 Howell, K.,Li, C.,Tolbert, W.D.,Beckett, D.,Pazgier, M.,Lu, W. Molecular basis of disulfide bonding-regulated HIV-1 capsid assembly To be Published 0 0 0 0 4ROP Crystal structure of enolase from Synechococcus elongatus 2014-10-28 2014-12-17 Gonzalez, J.M.,Marti-Arbona, R.,Chen, J.C.H.,Unkefer, C.J. The structure of Synechococcus elongatus enolase reveals key aspects of phosphoenolpyruvate binding Acta Crystallogr.,Sect.F 2022 78 177 184 4ROS Crystal structure of Methylobacterium extorquens malate dehydrogenase complexed with oxaloacetate and adenosine-5-diphosphoribose 2014-10-28 2014-12-17 Gonzalez, J.M.,Marti-Arbona, R.,Unkefer, C.J. Crystal structure of Methylobacterium extorquens malate dehydrogenase complexed with oxaloacetate and adenosine-5-diphosphoribose To be Published 0 0 0 0 4D30 25489882 Structure of rat neuronal nitric oxide synthase heme domain in complex with N-2-(2-(1H-imidazol-1-yl)pyrimidin-4-yl)ethyl-3-(pyridin- 3-yl)propan-1-amine 2014-10-20 2014-12-24 Mukherjee, P.,Li, H.,Sevrioukova, I.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Novel 2,4-Disubstituted Pyrimidines as Potent, Selective, and Cell-Permeable Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 1067 0 4D31 25489882 Structure of rat neuronal nitric oxide synthase heme domain in complex with 2-(2-(1H-imidazol-1-yl)pyrimidin-4-yl)-N-(3-cyanobenzyl) ethan-1-amine 2014-10-20 2014-12-24 Mukherjee, P.,Li, H.,Sevrioukova, I.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Novel 2,4-Disubstituted Pyrimidines as Potent, Selective, and Cell-Permeable Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 1067 0 4D32 25489882 Structure of rat neuronal nitric oxide synthase heme domain in complex with 3-(3-fluorophenyl)-N-2-(2-(5-methyl-1H-imidazol-1-yl) pyrimidin-4-yl)ethylpropan-1-amine 2014-10-20 2014-12-24 Mukherjee, P.,Li, H.,Sevrioukova, I.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Novel 2,4-Disubstituted Pyrimidines as Potent, Selective, and Cell-Permeable Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 1067 0 4D35 25489882 Structure of bovine endothelial nitric oxide synthase heme domain in complex with N-2-(2-(1H-imidazol-1-yl)pyrimidin-4-yl)ethyl-3-(3- fluorophenyl)propan-1-amine 2014-10-20 2014-12-24 Mukherjee, P.,Li, H.,Sevrioukova, I.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Novel 2,4-Disubstituted Pyrimidines as Potent, Selective, and Cell-Permeable Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 1067 0 4V3X 25489882 Structure of rat neuronal nitric oxide synthase heme domain in complex with N-2-(2-(1H-imidazol-1-yl)pyrimidin-4-yl)ethyl-3-(3- fluorophenyl)propan-1-amine 2014-10-20 2014-12-24 Mukherjee, P.,Li, H.,Sevrioukova, I.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Novel 2,4-Disubstituted Pyrimidines as Potent, Selective, and Cell-Permeable Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 1067 0 4V3Y 25489882 Structure of rat neuronal nitric oxide synthase heme domain in complex with N-2-(2-(1H-imidazol-1-yl)pyrimidin-4-yl)ethyl-3-(3- chlorophenyl)propan-1-amine 2014-10-20 2014-12-24 Mukherjee, P.,Li, H.,Sevrioukova, I.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Novel 2,4-Disubstituted Pyrimidines as Potent, Selective, and Cell-Permeable Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 1067 0 4V3Z 25489882 Structure of rat neuronal nitric oxide synthase heme domain in complex with 2-(2-(1H-imidazol-1-yl)pyrimidin-4-yl)-N-(2-(3- fluorophenyl)cyclopropylmethyl)ethan-1-amine 2014-10-20 2014-12-24 Mukherjee, P.,Li, H.,Sevrioukova, I.,Chreifi, G.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. Novel 2,4-Disubstituted Pyrimidines as Potent, Selective, and Cell-Permeable Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 1067 0 4D3I 25522110 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 6,6'-((5-(aminomethyl)-1,3-phenylene)bis(ethane-2,1-diyl))bis(4- methylpyridin-2-amine) 2014-10-22 2015-01-14 Holden, J.K.,Kang, S.,Hollingsworth, S.A.,Li, H.,Lim, N.,Chen, S.,Huang, H.,Xue, F.,Tang, W.,Silverman, R.B.,Poulos, T.L. Structure-Based Design of Bacterial Nitric Oxide Synthase Inhibitors. J.Med.Chem. 2015 58 994 0 4D3K 25522110 Structure of Bacillus subtilis nitric oxide synthase in complex with 6,6'-((5-(3-aminopropyl)-1,3-phenylene)bis(ethane-2,1-diyl))bis(4- methylpyridin-2-amine) 2014-10-22 2015-01-14 Holden, J.K.,Kang, S.,Hollingsworth, S.A.,Li, H.,Lim, N.,Chen, S.,Huang, H.,Xue, F.,Tang, W.,Silverman, R.B.,Poulos, T.L. Structure-Based Design of Bacterial Nitric Oxide Synthase Inhibitors. J.Med.Chem. 2015 58 994 0 4D3M 25522110 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 3-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)-5-(2-(4-methyl-6-(methylamino)pyridin-2-yl)ethyl)benzonitrile 2014-10-23 2015-01-14 Holden, J.K.,Kang, S.,Hollingsworth, S.A.,Li, H.,Lim, N.,Chen, S.,Huang, H.,Xue, F.,Tang, W.,Silverman, R.B.,Poulos, T.L. Structure-based design of bacterial nitric oxide synthase inhibitors. J. Med. Chem. 2015 58 994 1004 4OGM 25599642 MBP-fusion protein of PilA1 residues 26-159 2014-01-16 2015-01-14 Piepenbrink, K.H.,Maldarelli, G.A.,Martinez de la Pena, C.F.,Dingle, T.C.,Mulvey, G.L.,Lee, A.,von Rosenvinge, E.,Armstrong, G.D.,Donnenberg, M.S.,Sundberg, E.J. Structural and Evolutionary Analyses Show Unique Stabilization Strategies in the Type IV Pili of Clostridium difficile. Structure 2015 23 385 396 4WA2 25540377 The crystal structure of hemagglutinin from a H3N8 influenza virus isolated from New England harbor seals in complex with 3'SLN 2014-08-28 2015-01-14 Yang, H.,Nguyen, H.T.,Carney, P.J.,Guo, Z.,Chang, J.C.,Jones, J.,Davis, C.T.,Villanueva, J.M.,Gubareva, L.V.,Stevens, J. Structural and Functional Analysis of Surface Proteins from an A(H3N8) Influenza Virus Isolated from New England Harbor Seals. J.Virol. 2015 89 2801 2812 4WNT 25555909 Human Cytochrome P450 2D6 Ajmalicine Complex 2014-10-14 2015-01-14 Wang, A.,Stout, C.D.,Zhang, Q.,Johnson, E.F. Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding. J.Biol.Chem. 2015 290 5092 5104 4WNU 25555909 Human Cytochrome P450 2D6 Quinidine Complex 2014-10-14 2015-01-14 Wang, A.,Stout, C.D.,Zhang, Q.,Johnson, E.F. Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding. J.Biol.Chem. 2015 290 5092 5104 4WNV 25555909 Human Cytochrome P450 2D6 Quinine Complex 2014-10-14 2015-01-14 Wang, A.,Stout, C.D.,Zhang, Q.,Johnson, E.F. Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding. J.Biol.Chem. 2015 290 5092 5104 4WNW 25555909 Human Cytochrome P450 2D6 Thioridazine Complex 2014-10-14 2015-01-14 Wang, A.,Stout, C.D.,Zhang, Q.,Johnson, E.F. Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding. J.Biol.Chem. 2015 290 5092 5104 4RZM 25535803 Crystal structure of the Lsd19-lasalocid A complex 2014-12-22 2015-01-21 Wong, F.T.,Hotta, K.,Chen, X.,Fang, M.,Watanabe, K.,Kim, C.Y. Epoxide hydrolase-lasalocid a structure provides mechanistic insight into polyether natural product biosynthesis. J.Am.Chem.Soc. 2015 137 86 89 4O9U 25574024 Mechanism of transhydrogenase coupling proton translocation and hydride transfer 2014-01-02 2015-01-28 Leung, J.H.,Schurig-Briccio, L.A.,Yamaguchi, M.,Moeller, A.,Speir, J.A.,Gennis, R.B.,Stout, C.D. Structural biology. Division of labor in transhydrogenase by alternating proton translocation and hydride transfer. Science 2015 347 178 181 4RQL 25585967 Crystal structure of a human cytochrome P450 2B6 (Y226H/K262R) in complex with a monoterpene - sabinene 2014-11-03 2015-01-28 Shah, M.B.,Wilderman, P.R.,Liu, J.,Jang, H.H.,Zhang, Q.,Stout, C.D.,Halpert, J.R. Structural and Biophysical Characterization of Human Cytochromes P450 2B6 and 2A6 Bound to Volatile Hydrocarbons: Analysis and Comparison. Mol.Pharmacol. 2015 87 649 659 4RRT 25585967 Crystal structure of a human cytochrome P450 2B6 (Y226H/K262R) in complex with (+)-3-carene 2014-11-06 2015-01-28 Shah, M.B.,Wilderman, P.R.,Liu, J.,Jang, H.H.,Zhang, Q.,Stout, C.D.,Halpert, J.R. Structural and Biophysical Characterization of Human Cytochromes P450 2B6 and 2A6 Bound to Volatile Hydrocarbons: Analysis and Comparison. Mol.Pharmacol. 2015 87 649 659 4WD1 25488501 Acetoacetyl-CoA Synthetase from Streptomyces lividans 2014-09-05 2015-01-28 Mitchell, C.A.,Tucker, A.C.,Escalante-Semerena, J.C.,Gulick, A.M. The structure of S. lividans acetoacetyl-CoA synthetase shows a novel interaction between the C-terminal extension and the N-terminal domain. Proteins 2015 83 575 581 4N2C 25621824 Crystal structure of Protein Arginine Deiminase 2 (F221/222A, 10 mM Ca2+) 2013-10-04 2015-02-04 Slade, D.J.,Fang, P.,Dreyton, C.J.,Zhang, Y.,Fuhrmann, J.,Rempel, D.,Bax, B.D.,Coonrod, S.A.,Lewis, H.D.,Guo, M.,Gross, M.L.,Thompson, P.R. Protein arginine deiminase 2 binds calcium in an ordered fashion: implications for inhibitor design. Acs Chem.Biol. 2015 10 1043 1053 4WTJ 25678663 CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS IN COMPLEX WITH RNA TEMPLATE 5'-AUCC, RNA PRIMER 5'-PGG, MN2+, AND ADP 2014-10-30 2015-02-11 Appleby, T.C.,Perry, J.K.,Murakami, E.,Barauskas, O.,Feng, J.,Cho, A.,Fox, D.,Wetmore, D.R.,McGrath, M.E.,Ray, A.S.,Sofia, M.J.,Swaminathan, S.,Edwards, T.E. Structural basis for RNA replication by the hepatitis C virus polymerase. Science 2015 347 771 775 4TUV X-ray crystal structure of CYP119 from Sulfolobus acidocaldarius, complexed with 4-(4-chlorophenyl)imidazole 2014-06-24 2015-02-18 Basudhar, D.,Madrona, Y.,Ortiz De Montellano, P.R. NMR and X-ray Analysis of CYP119 Ligand Dependent Conformational Changes. To Be Published 0 0 0 0 4WPD X-ray Crystal Structure of CYP119 complexed with 4-(4-flourophenyl)-1H-imidazole 2014-10-17 2015-02-18 Basudhar, D.,Madrona, Y.,Kandel, S.,Lampe, J.N.,Ortiz de Montellano, P. TWO DIMENTIONAL NMR AND X-RAY ANALYSIS OF CYP119 LIGAND DEPENDENT CONFORMATIONAL DYNAMICS To Be Published 0 0 0 0 4WQJ Crystal Structure of CYP119 from Sulfolobus acidocaldarius, Collected at 298K and Complexed with 4-(4-bromophenyl)-1H imidazole 2014-10-22 2015-02-18 Basudhar, D.,Madrona, Y.,Kandel, S.,Lampe, J.N.,Ortiz de Montellano, P. TWO DIMENSIONAL NMR AND X-RAY ANALYSIS OF CYP119 LIGAND-DEPENDENT CONFORMATIONAL DYNAMICS. To Be Published 0 0 0 0 4XIR 25677667 Discovery of novel oxazepine and diazepine carboxamides as two new classes of heat shock protein 90 inhibitors 2015-01-07 2015-03-04 Neubert, T.,Numa, M.,Ernst, J.,Clemens, J.,Krenitsky, P.,Liu, M.,Fleck, B.,Woody, L.,Zuccola, H.,Stamos, D. Discovery of novel oxazepine and diazepine carboxamides as two new classes of heat shock protein 90 inhibitors. Bioorg.Med.Chem.Lett. 2015 25 1338 1342 4P3O 25824639 Structural Basis for Full-Spectrum Inhibition of Threonyl-tRNA Synthetase by Borrelidin 2 2014-03-09 2015-03-11 Fang, P.,Yu, X.,Jeong, S.J.,Mirando, A.,Chen, K.,Chen, X.,Kim, S.,Francklyn, C.S.,Guo, M. Structural basis for full-spectrum inhibition of translational functions on a tRNA synthetase. Nat Commun 2015 6 6402 6402 4P3P 25824639 Structural Basis for Full-Spectrum Inhibition of Threonyl-tRNA Synthetase by Borrelidin 3 2014-03-09 2015-03-11 Fang, P.,Yu, X.,Jeong, S.J.,Mirando, A.,Chen, K.,Chen, X.,Kim, S.,Francklyn, C.S.,Guo, M. Structural basis for full-spectrum inhibition of translational functions on a tRNA synthetase. Nat Commun 2015 6 6402 6402 4Q6X 25752604 Structure of phospholipase D Beta1B1i from Sicarius terrosus venom at 2.14 A resolution 2014-04-23 2015-03-18 Lajoie, D.M.,Roberts, S.A.,Zobel-Thropp, P.A.,Delahaye, J.L.,Bandarian, V.,Binford, G.J.,Cordes, M.H. Variable Substrate Preference among Phospholipase D Toxins from Sicariid Spiders. J.Biol.Chem. 2015 290 10994 11007 4RCV 25642788 M. tuberculosis 1-deoxy-d-xylulose-5-phosphate reductoisomerase bound to 1-deoxy-L-erythrulose 2014-09-17 2015-03-18 Kholodar, S.A.,Allen, C.L.,Gulick, A.M.,Murkin, A.S. The role of phosphate in a multistep enzymatic reaction: reactions of the substrate and intermediate in pieces. J.Am.Chem.Soc. 2015 137 2748 2756 5AGL 25874809 Structure of rat neuronal nitric oxide synthase heme domain in complex with (S)-2-Amino-5-(2-(methylsulfonyl)acetimidamido)pentanoic acid 2015-02-02 2015-04-29 Tang, W.,Li, H.,Doud, E.H.,Chen, Y.,Choing, S.,Plaza, C.,Kelleher, N.L.,Poulos, T.L.,Silverman, R.B. Mechanism of Inactivation of Neuronal Nitric Oxide Synthase by (S)-2-Amino-5-(2-(Methylthio)Acetimidamido)Pentanoic Acid. J.Am.Chem.Soc. 2015 137 5980 0 5AGN 25874809 Structure of rat neuronal nitric oxide synthase heme domain in complex with (S)-2-Amino-5-(2-hydroxyacetimidamido)pentanoic acid 2015-02-02 2015-04-29 Tang, W.,Li, H.,Doud, E.H.,Chen, Y.,Choing, S.,Plaza, C.,Kelleher, N.L.,Poulos, T.L.,Silverman, R.B. Mechanism of Inactivation of Neuronal Nitric Oxide Synthase by (S)-2-Amino-5-(2-(Methylthio)Acetimidamido)Pentanoic Acid. J.Am.Chem.Soc. 2015 137 5980 0 4R36 25945572 Crystal structure analysis of LpxA, a UDP-N-acetylglucosamine acyltransferase from Bacteroides fragilis 9343 2014-08-14 2015-05-06 Ngo, A.,Fong, K.T.,Cox, D.L.,Chen, X.,Fisher, A.J. Structures of Bacteroides fragilis uridine 5'-diphosphate-N-acetylglucosamine (UDP-GlcNAc) acyltransferase (BfLpxA). Acta Crystallogr.,Sect.D 2015 71 1068 1076 4R37 25945572 Crystal structure analysis of LpxA, a UDP-N-acetylglucosamine acyltransferase from Bacteroides fragilis 9343 with UDP-GlcNAc 2014-08-14 2015-05-06 Ngo, A.,Fong, K.T.,Cox, D.L.,Chen, X.,Fisher, A.J. Structures of Bacteroides fragilis uridine 5'-diphosphate-N-acetylglucosamine (UDP-GlcNAc) acyltransferase (BfLpxA). Acta Crystallogr.,Sect.D 2015 71 1068 1076 4XRZ 25781223 Human Cytochrome P450 2D6 BACE1 Inhibitor 6 Complex 2015-01-21 2015-05-20 Brodney, M.A.,Beck, E.M.,Butler, C.R.,Barreiro, G.,Johnson, E.F.,Riddell, D.,Parris, K.,Nolan, C.E.,Fan, Y.,Atchison, K.,Gonzales, C.,Robshaw, A.E.,Doran, S.D.,Bundesmann, M.W.,Buzon, L.,Dutra, J.,Henegar, K.,LaChapelle, E.,Hou, X.,Rogers, B.N.,Pandit, J.,Lira, R.,Martinez-Alsina, L.,Mikochik, P.,Murray, J.C.,Ogilvie, K.,Price, L.,Sakya, S.M.,Yu, A.,Zhang, Y.,O'Neill, B.T. Utilizing Structures of CYP2D6 and BACE1 Complexes To Reduce Risk of Drug-Drug Interactions with a Novel Series of Centrally Efficacious BACE1 Inhibitors. J.Med.Chem. 2015 58 3223 3252 4ZJ3 26038548 Crystal structure of cephalexin bound acyl-enzyme intermediate of Val216AcrF mutant TEM1 beta-lactamase from Escherichia coli: E166N and V216AcrF mutant. 2015-04-29 2015-05-20 Xiao, H.,Nasertorabi, F.,Choi, S.H.,Han, G.W.,Reed, S.A.,Stevens, R.C.,Schultz, P.G. Exploring the potential impact of an expanded genetic code on protein function. Proc.Natl.Acad.Sci.USA 2015 112 6961 6966 4Y4F Crystal structure of the mCD1d/GCK127/iNKTCR ternary complex 2015-02-10 2015-05-27 Birkholz, A.,Nemcovic, M.,Yu, E.D.,Girardi, E.,Wang, J.,Khurana, A.,Pauwels, N.,Franck, R.W.,Tsuji, M.,Howell, A.,Calenbergh, S.,Kronenberg, M.,Zajonc, D.M. Structural modifications of alphaGalCer in both lipid and carbohydrate moiety influence activation of murine and human iNKT cells To Be Published 0 0 0 0 4Y4H Crystal structure of the mCD1d/GCK152/iNKTCR ternary complex 2015-02-10 2015-05-27 Birkholz, A.,Nemcovic, M.,Yu, E.D.,Girardi, E.,Wang, J.,Khurana, A.,Pauwels, N.,Franck, R.W.,Tsuji, M.,Howell, A.,Calenbergh, S.,Kronenberg, M.,Zajonc, D.M. Structural modifications of alphaGalCer in both lipid and carbohydrate moiety influence activation of murine and human iNKT cells To Be Published 0 0 0 0 4QS4 26324721 Crystal Structure of CofB from Enterotoxigenic Escherichia coli 2014-07-02 2015-06-03 Kolappan, S.,Ng, D.,Yang, G.,Harn, T.,Craig, L. Crystal Structure of the Minor Pilin CofB, the Initiator of CFA/III Pilus Assembly in Enterotoxigenic Escherichia coli. J.Biol.Chem. 2015 290 25805 25818 4QS4 26324721 Crystal Structure of CofB from Enterotoxigenic Escherichia coli 2014-07-02 2015-06-03 Kolappan, S.,Ng, D.,Yang, G.,Harn, T.,Craig, L. Crystal Structure of the Minor Pilin CofB, the Initiator of CFA/III Pilus Assembly in Enterotoxigenic Escherichia coli. J.Biol.Chem. 2015 290 25805 25818 4YCW Crystal structure of cladosporin in complex with plasmodium like human lysyl-tRNA synthetase mutant 2015-02-20 2015-06-10 Fang, P.,Han, H.,Wang, J.,Chen, K.,Chen, X.,Guo, M. Structural Basis for Specific Inhibition of tRNA Synthetase by ATP Competitive Inhibitor Chem.Biol. 2015 22 1 0 4ZF4 27162964 Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(Cl1Y), H148D; circular permutant (50-51) 2015-04-21 2015-06-10 Oltrogge, L.M.,Boxer, S.G. Short Hydrogen Bonds and Proton Delocalization in Green Fluorescent Protein (GFP). Acs Cent.Sci. 2015 1 148 156 4UG9 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 6,6'-((4-(3-aminopropyl)benzene-1,3-diyl)diethane-2,1-diyl)bis(4- methylpyridin-2-amine) 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGC 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 6,6'-(((2S)-3-aminopropane-1,2-diyl)bis(oxymethanediyl))bis(4- methylpyridin-2-amine) 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGD 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 6-((((2S)-1-amino-4-((6-amino-4-methylpyridin-2-yl)methoxy)butan-2-yl) oxy)methyl)-4-methylpyridin-2-amine 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGE 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 4-methyl-6-((3-(piperidin-4-ylmethoxy)phenoxy)methyl)pyridin-2-amine 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGG 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with (R)-6-(2-Amino-2-(3-(2-(6-amino-4-methylpyridin-2-yl)ethyl)phenyl) ethyl)-4-methylpyridin-2-amine 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGI 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N1-(6-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)pyridin-2-yl)-N1,N2- dimethylethane-1,2-diamine 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGM 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N,N'-(ethane-1,2-diyldibenzene-3,1-diyl)dithiophene-2-carboximidamide 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGN 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with (S)-N-(3-(((Pyrrolidin-2-ylmethyl)amino)methyl)phenyl)thiophene-2- carboximidamide 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGO 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N-(4-(2-(ethyl(3-(((E)-imino(thiophen-2-yl)methyl)amino)benzyl)amino) ethyl)phenyl)thiophene-2-carboximidamide 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGP 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N',N'-(((2R)-3-aminopropane-1,2-diyl)bis(oxymethanediylbenzene-3,1- diyl))dithiophene-2-carboximidamide 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGR 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N-(3-(((2S,4S)-4-((3-((C-thiophen-2-ylcarbonimidoyl)amino)phenyl) methoxy)pyrrolidin-2-yl)methoxymethyl)phenyl)thiophene-2- carboximidamide 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGT 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N-(3-((pyrrolidin-3-yloxy)methyl)phenyl)thiophene-2-carboximidamide 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGU 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N'-(4-(((2S,4R)-4-(3-((C-thiophen-2-ylcarbonimidoyl)amino)phenoxy) pyrrolidin-2-yl)methoxy)phenyl)thiophene-2-carboximidamide 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGX 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N-(3-((ethyl(2-(3-fluorophenyl)ethyl)amino)methyl)phenyl)thiophene-2- carboximidamide 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4UGY 26062720 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with N1-(5-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)pyridin-3-yl)-N1,N2- dimethylethane-1,2-diamine 2015-03-22 2015-06-24 Holden, J.K.,Dejam, D.,Lewis, M.C.,Huang, H.,Kang, S.,Jing, Q.,Xue, F.,Silverman, R.B.,Poulos, T.L. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry 2015 54 4075 0 4YCV 26074468 Crystal structure of cladosporin in complex with plasmodium lysyl-tRNA synthetase 2015-02-20 2015-06-24 Fang, P.,Han, H.,Wang, J.,Chen, K.,Chen, X.,Guo, M. Structural Basis for Specific Inhibition of tRNA Synthetase by an ATP Competitive Inhibitor. Chem.Biol. 2015 22 734 744 4D7H 26091171 Structure of Bacillus subtilis nitric oxide synthase in complex with 7-(2-(3-(3-Fluorophenyl(propylamino)ethyl))quinolin-2- amine 2014-11-25 2015-07-01 Holden, J.K.,Kang, S.,Beasley, F.C.,Cinelli, M.A.,Li, H.,Roy, S.G.,Dejam, D.,Edinger, A.L.,Nizet, V.,Silverman, R.B.,Poulos, T.L. Nitric Oxide Synthase as a Target for Methicillin-Resistant Staphylococcus Aureus Chem.Biol. 2015 22 785 0 4RFN 26085162 Crystal structure of ADCC-potent Rhesus macaque ANTIBODY JR4 in complex with HIV-1 CLADE A/E GP120 and M48 2014-09-26 2015-07-15 Gohain, N.,Tolbert, W.D.,Acharya, P.,Yu, L.,Liu, T.,Zhao, P.,Orlandi, C.,Visciano, M.L.,Kamin-Lewis, R.,Sajadi, M.M.,Martin, L.,Robinson, J.E.,Kwong, P.D.,DeVico, A.L.,Ray, K.,Lewis, G.K.,Pazgier, M. Cocrystal Structures of Antibody N60-i3 and Antibody JR4 in Complex with gp120 Define More Cluster A Epitopes Involved in Effective Antibody-Dependent Effector Function against HIV-1. J.Virol. 2015 89 8840 8854 4RFO 26085162 Crystal structure of the ADCC-Potent Antibody N60-I3 Fab in complex with HIV-1 Clade A/E gp120 and M48u1 2014-09-26 2015-07-15 Gohain, N.,Tolbert, W.D.,Acharya, P.,Yu, L.,Liu, T.,Zhao, P.,Orlandi, C.,Visciano, M.L.,Kamin-Lewis, R.,Sajadi, M.M.,Martin, L.,Robinson, J.E.,Kwong, P.D.,DeVico, A.L.,Ray, K.,Lewis, G.K.,Pazgier, M. Cocrystal Structures of Antibody N60-i3 and Antibody JR4 in Complex with gp120 Define More Cluster A Epitopes Involved in Effective Antibody-Dependent Effector Function against HIV-1. J.Virol. 2015 89 8840 8854 4UH3 26120733 Structure of rat neuronal nitric oxide synthase heme domain in complex with N1-(3-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)-5- fluorophenyl)-N1,N2-dimethylethane-1,2-diamine 2015-03-23 2015-07-15 Kang, S.,Li, H.,Tang, W.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. 2-Aminopyridines with a Truncated Side Chain to Improve Human Neuronal Nitric Oxide Synthase Inhibitory Potency and Selectivity. J.Med.Chem. 2015 58 5548 0 4UH4 26120733 Structure of rat neuronal nitric oxide synthase heme domain in complex with 3-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)-5-(methyl(2-(methylamino)ethyl)amino)benzonitrile 2015-03-23 2015-07-15 Kang, S.,Li, H.,Tang, W.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. 2-Aminopyridines with a Truncated Side Chain to Improve Human Neuronal Nitric Oxide Synthase Inhibitory Potency and Selectivity. J.Med.Chem. 2015 58 5548 0 4UH7 26120733 Structure of bovine endothelial nitric oxide synthase heme domain in complex with N1-(3-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)phenyl)-N1, N2-dimethylethane-1,2-diamine 2015-03-23 2015-07-15 Kang, S.,Li, H.,Tang, W.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. 2-Aminopyridines with a Truncated Side Chain to Improve Human Neuronal Nitric Oxide Synthase Inhibitory Potency and Selectivity. J.Med.Chem. 2015 58 5548 0 4UH8 26120733 Structure of bovine endothelial nitric oxide synthase heme domain in complex with N1-(5-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)pyridin-3- yl)-N1,N2-dimethylethane-1,2-diamine 2015-03-23 2015-07-15 Kang, S.,Li, H.,Tang, W.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. 2-Aminopyridines with a Truncated Side Chain to Improve Human Neuronal Nitric Oxide Synthase Inhibitory Potency and Selectivity. J.Med.Chem. 2015 58 5548 0 4UH9 26120733 Structure of bovine endothelial nitric oxide synthase heme domain in complex with N1-(3-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)-5- fluorophenyl)-N1,N2-dimethylethane-1,2-diamine 2015-03-23 2015-07-15 Kang, S.,Li, H.,Tang, W.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. 2-Aminopyridines with a Truncated Side Chain to Improve Human Neuronal Nitric Oxide Synthase Inhibitory Potency and Selectivity. J.Med.Chem. 2015 58 5548 0 4UHA 26120733 Structure of bovine endothelial nitric oxide synthase heme domain in complex with 3-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)-5-(methyl(2-(methylamino)ethyl)amino)benzonitrile 2015-03-23 2015-07-15 Kang, S.,Li, H.,Tang, W.,Martasek, P.,Roman, L.J.,Poulos, T.L.,Silverman, R.B. 2-Aminopyridines with a Truncated Side Chain To Improve Human Neuronal Nitric Oxide Synthase Inhibitory Potency and Selectivity. J. Med. Chem. 2015 58 5548 5560 4W93 26214255 Human pancreatic alpha-amylase in complex with montbretin A 2014-08-27 2015-07-15 Williams, L.K.,Zhang, X.,Caner, S.,Tysoe, C.,Nguyen, N.T.,Wicki, J.,Williams, D.E.,Coleman, J.,McNeill, J.H.,Yuen, V.,Andersen, R.J.,Withers, S.G.,Brayer, G.D. The amylase inhibitor montbretin A reveals a new glycosidase inhibition motif. Nat.Chem.Biol. 2015 11 691 696 4RXZ 26148237 Crystal Structure of MDMX phosporylated Tyr99 in complex with a 12-mer peptide 2014-12-12 2015-07-22 Chen, X.,Gohain, N.,Zhan, C.,Lu, W.Y.,Pazgier, M.,Lu, W. Structural basis of how stress-induced MDMX phosphorylation activates p53. Oncogene 2016 35 1919 1925 5C33 26245150 Crystal Structure of Mouse Ryanodine Receptor 2 SPRY1 Domain 2015-06-16 2015-08-05 Yuchi, Z.,Yuen, S.M.,Lau, K.,Underhill, A.Q.,Cornea, R.L.,Fessenden, J.D.,Van Petegem, F. Crystal structures of ryanodine receptor SPRY1 and tandem-repeat domains reveal a critical FKBP12 binding determinant. Nat Commun 2015 6 7947 7947 4YL2 26260739 Aerococcus viridans L-lactate oxidase Y191F mutant 2015-03-04 2015-08-26 Stoisser, T.,Klimacek, M.,Wilson, D.K.,Nidetzky, B. Speeding up the product release: a second-sphere contribution from Tyr191 to the reactivity of l-lactate oxidase revealed in crystallographic and kinetic studies of site-directed variants. Febs J. 2015 282 4130 4140 4XEG 26358812 Structure of the enzyme-product complex resulting from TDG action on a G/hmU mismatch 2014-12-23 2015-09-09 Malik, S.S.,Coey, C.T.,Varney, K.M.,Pozharski, E.,Drohat, A.C. Thymine DNA glycosylase exhibits negligible affinity for nucleobases that it removes from DNA. Nucleic Acids Res. 2015 43 9541 9552 5D7Z 26457425 Crystal structure of glyoxalase I from Zea mays 2015-08-14 2015-09-09 Turra, G.L.,Agostini, R.B.,Fauguel, C.M.,Presello, D.A.,Andreo, C.S.,Gonzalez, J.M.,Campos-Bermudez, V.A. Structure of the novel monomeric glyoxalase I from Zea mays. Acta Crystallogr.,Sect.D 2015 71 2009 2020 4RAJ Crystal structure of heme oxygenase 2 from Chlamydomonas reinhardtii without heme. 2014-09-10 2015-09-16 Lopez, O.,Duanmu, D.,Lagarias, J.C.,Fisher, A.J. Crystal structure of heme oxygenase 2 from Chlamydomonas reinhardtii without heme. To be Published 0 0 0 0 5BVC 26354439 Crystal structure of Lipomyces starkeyi levoglucosan kinase bound to ADP, magnesium and levoglucosan in an alternate orientation. 2015-06-05 2015-09-16 Bacik, J.P.,Klesmith, J.R.,Whitehead, T.A.,Jarboe, L.R.,Unkefer, C.J.,Mark, B.L.,Michalczyk, R. Producing Glucose 6-Phosphate from Cellulosic Biomass: STRUCTURAL INSIGHTS INTO LEVOGLUCOSAN BIOCONVERSION. J.Biol.Chem. 2015 290 26638 26648 5CYS Structure of the enzyme-product complex resulting from TDG action on a GcaC mismatch 2015-07-30 2015-09-16 Malik, S.S.,Varney, K.M.,Pozharski, E.,Drohat, A.C. Characterizing the enzyme-product complexes of thymine DNA glycosylase using crystallography and NMR Nucleic Acids Res. 2015 0 0 0 4D6Z 26371436 Cytochrome P450 3A4 bound to imidazole and an inhibitor 2014-11-19 2015-09-23 Kaur, P.,Chamberlin, R.,Poulos, T.L.,Sevrioukova, I.F. Structure-Based Inhibitor Design for Evaluation of a Cyp3A4 Pharmacophore Model. J.Med.Chem. 2016 59 4210 0 4YW9 26322521 Structure of rat cytosolic pepck in complex with 3-mercaptopicolinic acid and GTP 2015-03-20 2015-09-23 Balan, M.D.,Mcleod, M.J.,Lotosky, W.R.,Ghaly, M.,Holyoak, T. Inhibition and Allosteric Regulation of Monomeric Phosphoenolpyruvate Carboxykinase by 3-Mercaptopicolinic Acid. Biochemistry 2015 54 5878 5887 4YWB 26322521 Structure of rat cytosolic pepck in complex with 3-mercaptopicolinic acid and oxalic acid 2015-03-20 2015-09-23 Balan, M.D.,Mcleod, M.J.,Lotosky, W.R.,Ghaly, M.,Holyoak, T. Inhibition and Allosteric Regulation of Monomeric Phosphoenolpyruvate Carboxykinase by 3-Mercaptopicolinic Acid. Biochemistry 2015 54 5878 5887 4ZKH 26396187 Crystal structure of the PmFTN variant E44Q soaked in iron (overnight) 2015-04-30 2015-09-30 Pfaffen, S.,Bradley, J.M.,Abdulqadir, R.,Firme, M.R.,Moore, G.R.,Le Brun, N.E.,Murphy, M.E. A Diatom Ferritin Optimized for Iron Oxidation but Not Iron Storage. J.Biol.Chem. 2015 290 28416 28427 4ZKW 26396187 Crystal structure of the PmFTN variant E44Q soaked in iron (45 min) 2015-04-30 2015-09-30 Pfaffen, S.,Bradley, J.M.,Abdulqadir, R.,Firme, M.R.,Moore, G.R.,Le Brun, N.E.,Murphy, M.E. A Diatom Ferritin Optimized for Iron Oxidation but Not Iron Storage. J.Biol.Chem. 2015 290 28416 28427 4ZKX 26396187 Crystal structure of the PmFTN variant E44Q soaked in iron (5 min) 2015-04-30 2015-09-30 Pfaffen, S.,Bradley, J.M.,Abdulqadir, R.,Firme, M.R.,Moore, G.R.,Le Brun, N.E.,Murphy, M.E. A Diatom Ferritin Optimized for Iron Oxidation but Not Iron Storage. J.Biol.Chem. 2015 290 28416 28427 4ZL5 26396187 Crystal structure of the PmFTN variant E44H soaked in iron (45 min) 2015-05-01 2015-09-30 Pfaffen, S.,Bradley, J.M.,Abdulqadir, R.,Firme, M.R.,Moore, G.R.,Le Brun, N.E.,Murphy, M.E. A Diatom Ferritin Optimized for Iron Oxidation but Not Iron Storage. J.Biol.Chem. 2015 290 28416 28427 4ZL6 26396187 Crystal structure of the PmFTN variant E44H soaked in iron (3 h) 2015-05-01 2015-09-30 Pfaffen, S.,Bradley, J.M.,Abdulqadir, R.,Firme, M.R.,Moore, G.R.,Le Brun, N.E.,Murphy, M.E. A Diatom Ferritin Optimized for Iron Oxidation but Not Iron Storage. J.Biol.Chem. 2015 290 28416 28427 4ZLW 26396187 Crystal structure of the PmFTN variant E130A soaked in iron (overnight) 2015-05-01 2015-09-30 Pfaffen, S.,Bradley, J.M.,Abdulqadir, R.,Firme, M.R.,Moore, G.R.,Le Brun, N.E.,Murphy, M.E. A Diatom Ferritin Optimized for Iron Oxidation but Not Iron Storage. J.Biol.Chem. 2015 290 28416 28427 4ZMC 26396187 Crystal structure of the PmFTN variant E130A soaked in iron (5 min) 2015-05-02 2015-09-30 Pfaffen, S.,Bradley, J.M.,Abdulqadir, R.,Firme, M.R.,Moore, G.R.,Le Brun, N.E.,Murphy, M.E. A Diatom Ferritin Optimized for Iron Oxidation but Not Iron Storage. J.Biol.Chem. 2015 290 28416 28427 4Y88 26483485 Crystal structure of the N-terminal domain of CEACAM8 2015-02-16 2015-10-07 Bonsor, D.A.,Gunther, S.,Beadenkopf, R.,Beckett, D.,Sundberg, E.J. Diverse oligomeric states of CEACAM IgV domains. Proc.Natl.Acad.Sci.USA 2015 112 13561 13566 5CVL 26388029 WDR48 (UAF-1), residues 2-580 2015-07-27 2015-10-07 Yin, J.,Schoeffler, A.J.,Wickliffe, K.,Newton, K.,Starovasnik, M.A.,Dueber, E.C.,Harris, S.F. Structural Insights into WD-Repeat 48 Activation of Ubiquitin-Specific Protease 46. Structure 2015 23 2043 2054 4PCO 26425937 Crystal structure of double-stranded RNA with four terminal GU wobble base pairs 2014-04-15 2015-10-14 Gu, X.,Mooers, B.H.,Thomas, L.M.,Malone, J.,Harris, S.,Schroeder, S.J. Structures and Energetics of Four Adjacent GU Pairs That Stabilize an RNA Helix. J.Phys.Chem.B 2015 119 13252 13261 4WNN 26455391 SPT16-H2A-H2B FACT HISTONE Complex 2014-10-13 2015-10-21 Kemble, D.J.,McCullough, L.L.,Whitby, F.G.,Formosa, T.,Hill, C.P. FACT Disrupts Nucleosome Structure by Binding H2A-H2B with Conserved Peptide Motifs. Mol.Cell 2015 60 294 306 4ZI4 26445170 YopH W354H Yersinia enterocolitica PTPase bond with Divanadate glycerol ester in the active site 2015-04-27 2015-10-28 Moise, G.,Gallup, N.M.,Alexandrova, A.N.,Hengge, A.C.,Johnson, S.J. Conservative Tryptophan Mutants of the Protein Tyrosine Phosphatase YopH Exhibit Impaired WPD-Loop Function and Crystallize with Divanadate Esters in Their Active Sites. Biochemistry 2015 54 6490 6500 4ZN5 26445170 YopH W354Y Yersinia enterocolitica PTPase bond with Divanadate glycerol ester in the active site 2015-05-04 2015-10-28 Moise, G.,Gallup, N.M.,Alexandrova, A.N.,Hengge, A.C.,Johnson, S.J. Conservative Tryptophan Mutants of the Protein Tyrosine Phosphatase YopH Exhibit Impaired WPD-Loop Function and Crystallize with Divanadate Esters in Their Active Sites. Biochemistry 2015 54 6490 6500 4ZQU 26449640 CdiA-CT/CdiI toxin and immunity complex from Yersinia pseudotuberculosis 2015-05-11 2015-10-28 Morse, R.P.,Willett, J.L.,Johnson, P.M.,Zheng, J.,Credali, A.,Iniguez, A.,Nowick, J.S.,Hayes, C.S.,Goulding, C.W. Diversification of beta-Augmentation Interactions between CDI Toxin/Immunity Proteins. J.Mol.Biol. 2015 427 3766 3784 4ZQV 26449640 CdiI Immunity protein from Yersinia kristensenii 2015-05-11 2015-10-28 Morse, R.P.,Willett, J.L.,Johnson, P.M.,Zheng, J.,Credali, A.,Iniguez, A.,Nowick, J.S.,Hayes, C.S.,Goulding, C.W. Diversification of beta-Augmentation Interactions between CDI Toxin/Immunity Proteins. J.Mol.Biol. 2015 427 3766 3784 5AD4 26469213 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-((3-(2-(Dimethylamino)ethyl)phenoxy)methyl)quinolin-2- amine 2015-08-20 2015-10-28 Cinelli, M.A.,Li, H.,Pensa, A.V.,Kang, S.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 8694 0 5AD6 26469213 Structure of rat neuronal nitric oxide synthase heme domain in complex with 7-((3-(Dimethylamino)methyl)phenoxy)methyl)quinolin-2- amine 2015-08-20 2015-10-28 Cinelli, M.A.,Li, H.,Pensa, A.V.,Kang, S.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 8694 0 5ADD 26469213 Structure of rat neuronal nitric oxide synthase d597n m336v mutant heme domain in complex with 7-((3-(methylamino)methyl) phenoxy)methyl)quinolin-2-amine 2015-08-20 2015-10-28 Cinelli, M.A.,Li, H.,Pensa, A.V.,Kang, S.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase. J.Med.Chem. 2015 58 8694 0 5DHJ 26459208 PIM1 in complex with Cpd4 (3-methyl-5-(pyridin-3-yl)-1H-pyrazolo[3,4-c]pyridine) 2015-08-31 2015-10-28 Hu, H.,Wang, X.,Chan, G.K.,Chang, J.H.,Do, S.,Drummond, J.,Ebens, A.,Lee, W.,Ly, J.,Lyssikatos, J.P.,Murray, J.,Moffat, J.G.,Chao, Q.,Tsui, V.,Wallweber, H.,Kolesnikov, A. Discovery of 3,5-substituted 6-azaindazoles as potent pan-Pim inhibitors. Bioorg.Med.Chem.Lett. 2015 25 5258 5264 5DIA 26459208 PIM1 in complex with Cpd36 ((1S,3S)-N1-(6-(5-(pyridin-3-yl)-1H-pyrazolo[3,4-c]pyridin-3-yl)pyridin-2-yl)cyclohexane-1,3-diamine) 2015-08-31 2015-10-28 Hu, H.,Wang, X.,Chan, G.K.,Chang, J.H.,Do, S.,Drummond, J.,Ebens, A.,Lee, W.,Ly, J.,Lyssikatos, J.P.,Murray, J.,Moffat, J.G.,Chao, Q.,Tsui, V.,Wallweber, H.,Kolesnikov, A. Discovery of 3,5-substituted 6-azaindazoles as potent pan-Pim inhibitors. Bioorg.Med.Chem.Lett. 2015 25 5258 5264 4RBQ 32 base pair oligo(U) RNA 2014-09-12 2015-11-11 Mooers, B.H.M. Structure of the Trypanosome RNA Editing U-Helix with 16 Contiguous Us To be Published 0 0 0 0 5DJF 26512869 Structure of M. tuberculosis CysQ, a PAP phosphatase - ligand-free structure 2015-09-02 2015-11-11 Erickson, A.I.,Sarsam, R.D.,Fisher, A.J. Crystal Structures of Mycobacterium tuberculosis CysQ, with Substrate and Products Bound. Biochemistry 2015 54 6830 6841 5DJG 26512869 Structure of M. tuberculosis CysQ, a PAP phosphatase with PAP, Mg, and Li bound 2015-09-02 2015-11-11 Erickson, A.I.,Sarsam, R.D.,Fisher, A.J. Crystal Structures of Mycobacterium tuberculosis CysQ, with Substrate and Products Bound. Biochemistry 2015 54 6830 6841 5DJH 26512869 Structure of M. tuberculosis CysQ, a PAP phosphatase with AMP, PO4, and 3Mg bound 2015-09-02 2015-11-11 Erickson, A.I.,Sarsam, R.D.,Fisher, A.J. Crystal Structures of Mycobacterium tuberculosis CysQ, with Substrate and Products Bound. Biochemistry 2015 54 6830 6841 5DJI 26512869 Structure of M. tuberculosis CysQ, a PAP phosphatase with AMP, PO4, and 2Mg bound 2015-09-02 2015-11-11 Erickson, A.I.,Sarsam, R.D.,Fisher, A.J. Crystal Structures of Mycobacterium tuberculosis CysQ, with Substrate and Products Bound. Biochemistry 2015 54 6830 6841 5DJJ 26512869 Structure of M. tuberculosis CysQ, a PAP phosphatase with PO4 and 2Mg bound 2015-09-02 2015-11-11 Erickson, A.I.,Sarsam, R.D.,Fisher, A.J. Crystal Structures of Mycobacterium tuberculosis CysQ, with Substrate and Products Bound. Biochemistry 2015 54 6830 6841 5DJK 26512869 Structure of M. tuberculosis CysQ, a PAP phosphatase with PO4 and 2Ca bound 2015-09-02 2015-11-11 Erickson, A.I.,Sarsam, R.D.,Fisher, A.J. Crystal Structures of Mycobacterium tuberculosis CysQ, with Substrate and Products Bound. Biochemistry 2015 54 6830 6841 5D83 26571340 Crystal Structure of Ketosteroid Isomerase from Pseudomonas putida (pKSI); D40N, Y32(Cl-Y) 2015-08-15 2015-12-02 Wu, Y.,Fried, S.D.,Boxer, S.G. Dissecting Proton Delocalization in an Enzyme's Hydrogen Bond Network with Unnatural Amino Acids. Biochemistry 2015 54 7110 7119 5DFV 26637054 CRYSTAL STRUCTURE OF HUMAN CD81 LARGE EXTRACELLULAR LOOP IN COMPLEX WITH MURINE FAB FRAGMENT K04 2015-08-27 2015-12-16 Bujotzek, A.,Lipsmeier, F.,Harris, S.F.,Benz, J.,Kuglstatter, A.,Georges, G. VH-VL orientation prediction for antibody humanization candidate selection: A case study. Mabs 2016 8 288 305 5DFW 26637054 CRYSTAL STRUCTURE OF HUMAN CD81 LARGE EXTRACELLULAR LOOP IN COMPLEX WITH SINGLE CHAIN FV FRAGMENT K13 2015-08-27 2015-12-16 Bujotzek, A.,Lipsmeier, F.,Harris, S.F.,Benz, J.,Kuglstatter, A.,Georges, G. VH-VL orientation prediction for antibody humanization candidate selection: A case study. Mabs 2016 8 288 305 5DKQ 26727270 Crystal Structure of Calcium-loaded S100B bound to SBi4214 2015-09-03 2016-01-20 Cavalier, M.C.,Ansari, M.I.,Pierce, A.D.,Wilder, P.T.,McKnight, L.E.,Raman, E.P.,Neau, D.B.,Bezawada, P.,Alasady, M.J.,Charpentier, T.H.,Varney, K.M.,Toth, E.A.,MacKerell, A.D.,Coop, A.,Weber, D.J. Small Molecule Inhibitors of Ca(2+)-S100B Reveal Two Protein Conformations. J.Med.Chem. 2016 59 592 608 5DKR 26727270 Crystal Structure of Calcium-loaded S100B bound to SBi29 2015-09-03 2016-01-20 Cavalier, M.C.,Ansari, M.I.,Pierce, A.D.,Wilder, P.T.,McKnight, L.E.,Raman, E.P.,Neau, D.B.,Bezawada, P.,Alasady, M.J.,Charpentier, T.H.,Varney, K.M.,Toth, E.A.,MacKerell, A.D.,Coop, A.,Weber, D.J. Small Molecule Inhibitors of Ca(2+)-S100B Reveal Two Protein Conformations. J.Med.Chem. 2016 59 592 608 5EW9 26732741 Crystal Structure of Aurora A Kinase Domain Bound to MK-5108 2015-11-20 2016-01-20 de Groot, C.O.,Hsia, J.E.,Anzola, J.V.,Motamedi, A.,Yoon, M.,Wong, Y.L.,Jenkins, D.,Lee, H.J.,Martinez, M.B.,Davis, R.L.,Gahman, T.C.,Desai, A.,Shiau, A.K. A Cell Biologist's Field Guide to Aurora Kinase Inhibitors. Front Oncol 2015 5 285 285 4ZAM 26340563 Crystal structure of SHV-1 beta-lactamase bound to avibactam 2015-04-13 2016-01-27 Krishnan, N.P.,Nguyen, N.Q.,Papp-Wallace, K.M.,Bonomo, R.A.,van den Akker, F. Inhibition of Klebsiella beta-Lactamases (SHV-1 and KPC-2) by Avibactam: A Structural Study. Plos One 2015 10 0 0 4ZBE 26340563 Crystal structure of KPC-2 beta-lactamase complexed with avibactam 2015-04-14 2016-01-27 Krishnan, N.P.,Nguyen, N.Q.,Papp-Wallace, K.M.,Bonomo, R.A.,van den Akker, F. Inhibition of Klebsiella beta-Lactamases (SHV-1 and KPC-2) by Avibactam: A Structural Study. Plos One 2015 10 0 0 5EE8 26729491 Crystal structure of S02030 boronic acid inhibitor complexed to SHV-1 beta-lactamase 2015-10-22 2016-01-27 Nguyen, N.Q.,Krishnan, N.P.,Rojas, L.J.,Prati, F.,Caselli, E.,Romagnoli, C.,Bonomo, R.A.,van den Akker, F. Crystal Structures of KPC-2 and SHV-1 beta-Lactamases in Complex with the Boronic Acid Transition State Analog S02030. Antimicrob.Agents Chemother. 2016 60 1760 1766 5D85 26794841 Staphyloferrin B precursor biosynthetic enzyme SbnA bound to aminoacrylate intermediate 2015-08-15 2016-02-03 Kobylarz, M.J.,Grigg, J.C.,Liu, Y.,Lee, M.S.,Heinrichs, D.E.,Murphy, M.E. Deciphering the Substrate Specificity of SbnA, the Enzyme Catalyzing the First Step in Staphyloferrin B Biosynthesis. Biochemistry 2016 55 927 939 5D86 26794841 Staphyloferrin B precursor biosynthetic enzyme SbnA Y152F variant 2015-08-15 2016-02-03 Kobylarz, M.J.,Grigg, J.C.,Liu, Y.,Lee, M.S.,Heinrichs, D.E.,Murphy, M.E. Deciphering the Substrate Specificity of SbnA, the Enzyme Catalyzing the First Step in Staphyloferrin B Biosynthesis. Biochemistry 2016 55 927 939 5D87 26794841 Staphyloferrin B precursor biosynthetic enzyme SbnA Y152F/S185G variant 2015-08-15 2016-02-03 Kobylarz, M.J.,Grigg, J.C.,Liu, Y.,Lee, M.S.,Heinrichs, D.E.,Murphy, M.E. Deciphering the Substrate Specificity of SbnA, the Enzyme Catalyzing the First Step in Staphyloferrin B Biosynthesis. Biochemistry 2016 55 927 939 5E58 26826176 Crystal Structure Of Cytochrome P450 2B35 from Desert Woodrat Neotoma Lepida in complex with 4-(4-chlorophenyl)imidazole 2015-10-08 2016-02-10 Shah, M.B.,Liu, J.,Huo, L.,Zhang, Q.,Dearing, M.D.,Wilderman, P.R.,Szklarz, G.D.,Stout, C.D.,Halpert, J.R. Structure-Function Analysis of Mammalian CYP2B Enzymes Using 7-Substituted Coumarin Derivatives as Probes: Utility of Crystal Structures and Molecular Modeling in Understanding Xenobiotic Metabolism. Mol.Pharmacol. 2016 89 435 445 4XEM Crystal Structure of wild type human AlaRS catalytic domain 2014-12-24 2016-02-17 Zhou, H.,Yang, X.L. Crystal structure of wild type human AlaRS catalytic domain To Be Published 0 0 0 0 5CAJ 32796037 Crystal structure of E. coli YaaA, a member of the DUF328/UPF0246 family 2015-06-29 2016-02-24 Prahlad, J.,Yuan, Y.,Lin, J.,Chang, C.W.,Iwata-Reuyl, D.,Liu, Y.,de Crecy-Lagard, V.,Wilson, M.A. The DUF328 family member YaaA is a DNA-binding protein with a novel fold. J.Biol.Chem. 2020 295 14236 14247 4YBL 27041594 Crystal structure of the stabilized inner domain of clade A/E HIV-1 gp120 in complex with the ADCC mediating ANTI-HIV-1 antibody A32 2015-02-18 2016-03-02 Tolbert, W.D.,Gohain, N.,Veillette, M.,Chapleau, J.P.,Orlandi, C.,Visciano, M.L.,Ebadi, M.,DeVico, A.L.,Fouts, T.R.,Finzi, A.,Lewis, G.K.,Pazgier, M. Paring Down HIV Env: Design and Crystal Structure of a Stabilized Inner Domain of HIV-1 gp120 Displaying a Major ADCC Target of the A32 Region. Structure 2016 24 697 709 5EM4 26982502 Structure of CYP2B4 F244W in a ligand free conformation 2015-11-05 2016-03-23 Liu, J.,Shah, M.B.,Zhang, Q.,Stout, C.D.,Halpert, J.R.,Wilderman, P.R. Coumarin Derivatives as Substrate Probes of Mammalian Cytochromes P450 2B4 and 2B6: Assessing the Importance of 7-Alkoxy Chain Length, Halogen Substitution, and Non-Active Site Mutations. Biochemistry 2016 55 1997 2007 5FQF 27038508 The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens 2015-12-10 2016-03-30 Noach, I.,Pluvinage, B.,Laurie, C.,Abe, K.T.,Alteen, M.,Vocadlo, D.J.,Boraston, A.B. The Details of Glycolipid Glycan Hydrolysis by the Structural Analysis of a Family 123 Glycoside Hydrolase from Clostridium Perfringens J.Mol.Biol. 2016 428 3253 0 4YZB CDPK1 from Eimeria tenella in complex with inhibitor UW1521 2015-03-24 2016-04-06 Ojo, K.K.,Vidadala, R.,Maly, D.J.,Van Voorhis, W.C.,Merritt, E.A. CDPK is a druggable target in the apicomplexan parasite Eimeria to be published 0 0 0 0 5DA6 27050127 Atomic resolution crystal structure of double-stranded RNA 32 base pairs long determined from random starting phases angles in the presence of pseudo translational symmetry using the direct methods program SIR2014. 2015-08-19 2016-04-13 Mooers, B.H. Direct-methods structure determination of a trypanosome RNA-editing substrate fragment with translational pseudosymmetry. Acta Crystallogr D Struct Biol 2016 72 477 487 5EWR 26833716 C merolae U4 snRNP protein Snu13 2015-11-20 2016-04-20 Black, C.S.,Garside, E.L.,MacMillan, A.M.,Rader, S.D. Conserved structure of Snu13 from the highly reduced spliceosome of Cyanidioschyzon merolae. Protein Sci. 2016 25 911 916 5FVR 27050842 Structure of rat neuronal nitric oxide synthase heme domain in complex with 4-METHYL-6-(2-(5-(1-METHYLPIPERIDIN-4-YL)PYRIDIN-3-YL) ETHYL)PYRIDIN-2-AMINE 2016-02-10 2016-04-20 Wang, H.,Qin, Y.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibition by Optimization of the 2-Aminopyridine-Based Scaffold with a Pyridine Linker. J.Med.Chem. 2016 59 4913 0 5FVT 27050842 Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(2-(5-(3-(dimethylamino)propyl)pyridin-3-yl)ethyl)-4- methylpyridin-2-amine 2016-02-10 2016-04-20 Wang, H.,Qin, Y.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibition by Optimization of the 2-Aminopyridine-Based Scaffold with a Pyridine Linker. J.Med.Chem. 2016 59 4913 0 5FVV 27050842 Structure of human nNOS R354A G357D mutant heme domain in complex with 4-methyl-6-(2-(5-(1-methylpiperidin-4-yl)pyridin-3-yl)ethyl) pyridin-2-amine 2016-02-10 2016-04-20 Wang, H.,Qin, Y.,Li, H.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibition by Optimization of the 2-Aminopyridine-Based Scaffold with a Pyridine Linker. J.Med.Chem. 2016 59 4913 0 4YV8 27498895 Crystal structure of cathepsin K bound to the covalent inhibitor lichostatinal 2015-03-19 2016-05-04 Aguda, A.H.,Lavallee, V.,Cheng, P.,Bott, T.M.,Meimetis, L.G.,Law, S.,Nguyen, N.T.,Williams, D.E.,Kaleta, J.,Villanueva, I.,Davies, J.,Andersen, R.J.,Brayer, G.D.,Bromme, D. Affinity Crystallography: A New Approach to Extracting High-Affinity Enzyme Inhibitors from Natural Extracts. J.Nat.Prod. 2016 79 1962 1970 4YVA 27498895 Cathepsin K co-crystallized with actinomycetes extract 2015-03-19 2016-05-04 Aguda, A.H.,Lavallee, V.,Cheng, P.,Bott, T.M.,Meimetis, L.G.,Law, S.,Nguyen, N.T.,Williams, D.E.,Kaleta, J.,Villanueva, I.,Davies, J.,Andersen, R.J.,Brayer, G.D.,Bromme, D. Affinity Crystallography: A New Approach to Extracting High-Affinity Enzyme Inhibitors from Natural Extracts. J.Nat.Prod. 2016 79 1962 1970 5IK1 27452076 Open state of P450cam after soaking in camphor 2016-03-03 2016-05-04 Liou, S.H.,Mahomed, M.,Lee, Y.T.,Goodin, D.B. Effector Roles of Putidaredoxin on Cytochrome P450cam Conformational States. J.Am.Chem.Soc. 2016 138 10163 10172 5C9S Crystal Structure of the C-terminal domain of Rrp5 2015-06-28 2016-05-18 Khoshnevis, S.,Karbstein, K. Crystal Structure of the C-terminal domain of Rrp5 Plos Biol. 2016 0 0 0 5I3F 27149328 Structure-Function Studies on Role of Hydrophobic Clamping of a Basic Glutamate in Catalysis by Triosephosphate Isomerase 2016-02-10 2016-05-18 Richard, J.P.,Amyes, T.L.,Malabanan, M.M.,Zhai, X.,Kim, K.J.,Reinhardt, C.J.,Wierenga, R.K.,Drake, E.J.,Gulick, A.M. Structure-Function Studies of Hydrophobic Residues That Clamp a Basic Glutamate Side Chain during Catalysis by Triosephosphate Isomerase. Biochemistry 2016 55 3036 3047 5I3I 27149328 Structure-Function Studies on Role of Hydrophobic Clamping of a Basic Glutamate in Catalysis by Triosephosphate Isomerase 2016-02-10 2016-05-18 Richard, J.P.,Amyes, T.L.,Malabanan, M.M.,Zhai, X.,Kim, K.J.,Reinhardt, C.J.,Wierenga, R.K.,Drake, E.J.,Gulick, A.M. Structure-Function Studies of Hydrophobic Residues That Clamp a Basic Glutamate Side Chain during Catalysis by Triosephosphate Isomerase. Biochemistry 2016 55 3036 3047 5I3J 27149328 Structure-Function Studies on Role of Hydrophobic Clamping of a Basic Glutamate in Catalysis by Triosephosphate Isomerase 2016-02-10 2016-05-18 Richard, J.P.,Amyes, T.L.,Malabanan, M.M.,Zhai, X.,Kim, K.J.,Reinhardt, C.J.,Wierenga, R.K.,Drake, E.J.,Gulick, A.M. Structure-Function Studies of Hydrophobic Residues That Clamp a Basic Glutamate Side Chain during Catalysis by Triosephosphate Isomerase. Biochemistry 2016 55 3036 3047 5I3K 27149328 Structure-Function Studies on Role of Hydrophobic Clamping of a Basic Glutamate in Catalysis by Triosephosphate Isomerase 2016-02-10 2016-05-18 Richard, J.P.,Amyes, T.L.,Malabanan, M.M.,Zhai, X.,Kim, K.J.,Reinhardt, C.J.,Wierenga, R.K.,Drake, E.J.,Gulick, A.M. Structure-Function Studies of Hydrophobic Residues That Clamp a Basic Glutamate Side Chain during Catalysis by Triosephosphate Isomerase. Biochemistry 2016 55 3036 3047 5ER5 27303795 Crystal Structure of Calcium-loaded S100B bound to SC1990 2015-11-13 2016-06-08 Cavalier, M.C.,Melville, Z.,Aligholizadeh, E.,Raman, E.P.,Yu, W.,Fang, L.,Alasady, M.,Pierce, A.D.,Wilder, P.T.,MacKerell, A.D.,Weber, D.J. Novel protein-inhibitor interactions in site 3 of Ca(2+)-bound S100B as discovered by X-ray crystallography. Acta Crystallogr D Struct Biol 2016 72 753 760 5G0N 27250740 Structure of rat neuronal nitric oxide synthase D597N mutant heme domain in complex with N1-(5-(2-(6-AMINO-4-METHYLPYRIDIN-2-YL)ETHYL) PYRIDIN-3-YL)-N1,N2-DIMETHYLETHANE-1,2-DIAMINE 2016-03-21 2016-06-15 Li, H.,Wang, H.,Kang, S.,Silverman, R.B.,Poulos, T.L. Electrostatic Control of Isoform Selective Inhibitor Binding in Nitric Oxide Synthase. Biochemistry 2016 55 3702 0 4Z4A 27401545 Avirulence protein 4 (Avr4) from Pseudocercospora fuligena 2015-04-01 2016-06-29 Kohler, A.C.,Chen, L.H.,Hurlburt, N.,Salvucci, A.,Schwessinger, B.,Fisher, A.J.,Stergiopoulos, I. Structural Analysis of an Avr4 Effector Ortholog Offers Insight into Chitin Binding and Recognition by the Cf-4 Receptor. Plant Cell 2016 28 1945 1965 5EBU 27302031 Aerococcus viridans L-lactate oxidase Y215F mutant 2015-10-19 2016-06-29 Stoisser, T.,Brunsteiner, M.,Wilson, D.K.,Nidetzky, B. Conformational flexibility related to enzyme activity: evidence for a dynamic active-site gatekeeper function of Tyr(215) in Aerococcus viridans lactate oxidase. Sci Rep 2016 6 27892 27892 5IWL 27294525 CD47-diabody complex 2016-03-22 2016-06-29 Weiskopf, K.,Jahchan, N.S.,Schnorr, P.J.,Cristea, S.,Ring, A.M.,Maute, R.L.,Volkmer, A.K.,Volkmer, J.P.,Liu, J.,Lim, J.S.,Yang, D.,Seitz, G.,Nguyen, T.,Wu, D.,Jude, K.,Guerston, H.,Barkal, A.,Trapani, F.,George, J.,Poirier, J.T.,Gardner, E.E.,Miles, L.A.,de Stanchina, E.,Lofgren, S.M.,Vogel, H.,Winslow, M.M.,Dive, C.,Thomas, R.K.,Rudin, C.M.,van de Rijn, M.,Majeti, R.,Garcia, K.C.,Weissman, I.L.,Sage, J. CD47-blocking immunotherapies stimulate macrophage-mediated destruction of small-cell lung cancer. J.Clin.Invest. 2016 126 2610 2620 5D9S 26824387 Structure of HLA-A2:01 with the 11-mer peptide F11V 2015-08-19 2016-07-06 McMurtrey, C.,Trolle, T.,Sansom, T.,Remesh, S.G.,Kaever, T.,Bardet, W.,Jackson, K.,McLeod, R.,Sette, A.,Nielsen, M.,Zajonc, D.M.,Blader, I.J.,Peters, B.,Hildebrand, W. Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove. Elife 2016 5 0 0 5JW8 27698424 Crystal structure of the Type IV pilin subunit PilE from Neisseria meningitidis 2016-05-11 2016-07-06 Kolappan, S.,Coureuil, M.,Yu, X.,Nassif, X.,Egelman, E.H.,Craig, L. Structure of the Neisseria meningitidis Type IV pilus. Nat Commun 2016 7 13015 13015 5IOJ 27353520 Crystal structure of the Sphingobium sp. TCM1 phosphotriesterase without the binuclear manganese center 2016-03-08 2016-07-13 Mabanglo, M.F.,Xiang, D.F.,Bigley, A.N.,Raushel, F.M. Structure of a Novel Phosphotriesterase from Sphingobium sp. TCM1: A Familiar Binuclear Metal Center Embedded in a Seven-Bladed beta-Propeller Protein Fold. Biochemistry 2016 55 3963 3974 5JXZ 27373320 A low magnesium structure of the isochorismate synthase, EntC 2016-05-13 2016-07-20 Meneely, K.M.,Sundlov, J.A.,Gulick, A.M.,Moran, G.R.,Lamb, A.L. An Open and Shut Case: The Interaction of Magnesium with MST Enzymes. J.Am.Chem.Soc. 2016 138 9277 9293 5JY8 27373320 An iron-bound structure of the isochorismate synthase EntC 2016-05-13 2016-07-20 Meneely, K.M.,Sundlov, J.A.,Gulick, A.M.,Moran, G.R.,Lamb, A.L. An Open and Shut Case: The Interaction of Magnesium with MST Enzymes. J.Am.Chem.Soc. 2016 138 9277 9293 5JY9 27373320 An iron-bound structure of the salicylate synthase Irp9 2016-05-13 2016-07-20 Meneely, K.M.,Sundlov, J.A.,Gulick, A.M.,Moran, G.R.,Lamb, A.L. An Open and Shut Case: The Interaction of Magnesium with MST Enzymes. J.Am.Chem.Soc. 2016 138 9277 9293 5CUM 29858013 Crystal structure of Human Defensin-5 Y27A mutant crystal form 1. 2015-07-24 2016-07-27 Xu, D.,Liao, C.,Zhang, B.,Tolbert, W.D.,He, W.,Dai, Z.,Zhang, W.,Yuan, W.,Pazgier, M.,Liu, J.,Yu, J.,Sansonetti, P.J.,Bevins, C.L.,Shao, Y.,Lu, W. Human Enteric alpha-Defensin 5 Promotes Shigella Infection by Enhancing Bacterial Adhesion and Invasion. Immunity 2018 0 0 0 5DDH 26824387 Structure of HLA-A2:01 with the 12-mer peptide F12K 2015-08-24 2016-07-27 McMurtrey, C.,Trolle, T.,Sansom, T.,Remesh, S.G.,Kaever, T.,Bardet, W.,Jackson, K.,McLeod, R.,Sette, A.,Nielsen, M.,Zajonc, D.M.,Blader, I.J.,Peters, B.,Hildebrand, W. Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove. Elife 2016 5 0 0 5J43 27531961 CdiA-CT from uropathogenic Escherichia coli in complex with CysK 2016-03-31 2016-07-27 Johnson, P.M.,Beck, C.M.,Morse, R.P.,Garza-Sanchez, F.,Low, D.A.,Hayes, C.S.,Goulding, C.W. Unraveling the essential role of CysK in CDI toxin activation. Proc. Natl. Acad. Sci. U.S.A. 2016 113 9792 9797 5J4A 27445337 CdiA-CT toxin from Burkholderia pseudomallei E479 in complex with cognate CdiI immunity protein 2016-03-31 2016-07-27 Johnson, P.M.,Gucinski, G.C.,Garza-Sanchez, F.,Wong, T.,Hung, L.W.,Hayes, C.S.,Goulding, C.W. Functional Diversity of Cytotoxic tRNase/Immunity Protein Complexes from Burkholderia pseudomallei. J.Biol.Chem. 2016 291 19387 19400 5J5V 27531961 CdiA-CT from uropathogenic Escherichia coli in complex with cognate immunity protein and CysK 2016-04-04 2016-07-27 Johnson, P.M.,Beck, C.M.,Morse, R.P.,Garza-Sanchez, F.,Low, D.A.,Hayes, C.S.,Goulding, C.W. Unraveling the essential role of CysK in CDI toxin activation. Proc. Natl. Acad. Sci. U.S.A. 2016 113 9792 9797 5CXP X-ray crystallographic protein structure of the glycoside hydrolase family 30 subfamily 8 xylanase, Xyn30A, from Clostridium acetobutylicum 2015-07-29 2016-08-10 St John, J.F.,Dietrich, D.,Bologna, P.,Hurlbert, J.C.,Pozharski, E.P.,Crooks, C. Crystal structure of a GH30 xylanase To Be Published 0 0 0 0 5KUN 28009548 Human cyclophilin A at 100K, Data set 2 2016-07-13 2016-08-10 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KUQ 28009548 Human cyclophilin A at 100K, Data set 4 2016-07-13 2016-08-10 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KUS 28009548 Human cyclophilin A at 100K, Data set 6 2016-07-13 2016-08-10 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KUV 28009548 Human cyclophilin A at 100K, Data set 8 2016-07-13 2016-08-10 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KUW 28009548 Human cyclophilin A at 100K, Data set 9 2016-07-13 2016-08-10 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KUZ 28009548 Human cyclophilin A at 278K, Data set 1 2016-07-13 2016-08-10 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KV1 28009548 Human cyclophilin A at 278K, Data set 3 2016-07-13 2016-08-10 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KV2 28009548 Human cyclophilin A at 278K, Data set 4 2016-07-13 2016-08-10 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KV3 28009548 Human cyclophilin A at 278K, Data set 5 2016-07-13 2016-08-10 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KV4 28009548 Human cyclophilin A at 278K, Data set 6 2016-07-13 2016-08-10 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KV5 28009548 Human cyclophilin A at 278K, Data set 7 2016-07-13 2016-08-10 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KV6 28009548 Human cyclophilin A at 278K, Data set 8 2016-07-13 2016-08-10 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5JA3 27580226 Mycobacterium tuberculosis Dihydrofolate Reductase complexed with beta- NADPH and 3'-(3-(2,4-diamino-6-ethylpyrimidin-5-yl)prop-2-yn-1-yl)-4'-methoxy-[1,1'-b iphenyl]-4-carboxylic acid (UCP1106) 2016-04-11 2016-08-24 Hajian, B.,Scocchera, E.,Keshipeddy, S.,G-Dayanandan, N.,Shoen, C.,Krucinska, J.,Reeve, S.,Cynamon, M.,Anderson, A.C.,Wright, D.L. Propargyl-Linked Antifolates Are Potent Inhibitors of Drug-Sensitive and Drug-Resistant Mycobacterium tuberculosis. Plos One 2016 11 0 0 5KBD Structural Studies of Transcription Factor p73 DNA Binding Domain Bound to PA26 20-mer Response Element 2016-06-03 2016-08-31 Nguyen, H.T.,Huang, D. Structural Studies of Transcription Factor p73 DNA Binding Domain Bound to PA26 20-mer Response Element To Be Published 0 0 0 0 5KUO 28009548 Human cyclophilin A at 100K, Data set 3 2016-07-13 2016-08-31 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KUU 28009548 Human cyclophilin A at 100K, Data set 7 2016-07-13 2016-08-31 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KV0 28009548 Human cyclophilin A at 278K, Data set 2 2016-07-13 2016-08-31 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KV7 28009548 Human cyclophilin A at 278K, Data set 9 2016-07-13 2016-08-31 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5E0F Human pancreatic alpha-amylase in complex with mini-montbretin A 2015-09-28 2016-09-07 Caner, S.,Brayer, G.D. Human pancreatic alpha-amylase in complex with mini-montbretin A To Be Published 0 0 0 0 5K9G 28126741 Crystal Structure of GTP Cyclohydrolase-IB with Tris 2016-05-31 2016-09-07 Paranagama, N.,Bonnett, S.A.,Alvarez, J.,Luthra, A.,Stec, B.,Gustafson, A.,Iwata-Reuyl, D.,Swairjo, M.A. Mechanism and catalytic strategy of the prokaryotic-specific GTP cyclohydrolase-IB. Biochem.J. 2017 474 1017 1039 5KP1 27545569 Crystal Structure of Ketosteroid Isomerase from Pseudomonas putida (pKSI) bound to Equilenin; D40N, Y16(Cl-Y) 2016-07-01 2016-09-07 Wu, Y.,Boxer, S.G. A Critical Test of the Electrostatic Contribution to Catalysis with Noncanonical Amino Acids in Ketosteroid Isomerase. J.Am.Chem.Soc. 2016 138 11890 11895 5KUL 28009548 Human cyclophilin A at 100K, Data set 1 2016-07-13 2016-09-07 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KUR 28009548 Human cyclophilin A at 100K, Data set 5 2016-07-13 2016-09-07 Russi, S.,Gonzalez, A.,Kenner, L.R.,Keedy, D.A.,Fraser, J.S.,van den Bedem, H. Conformational variation of proteins at room temperature is not dominated by radiation damage. J Synchrotron Radiat 2017 24 73 82 5KU5 27583660 Crystal Structure of CusS Sensor Domain with Silver Bound 2016-07-12 2016-09-14 Affandi, T.,Issaian, A.V.,McEvoy, M.M. The Structure of the Periplasmic Sensor Domain of the Histidine Kinase CusS Shows Unusual Metal Ion Coordination at the Dimeric Interface. Biochemistry 2016 55 5296 5306 5DZG 27859885 Crystal Structure of the catalytic nucleophile mutant of VvEG16 in complex with a xyloglucan tetradecasaccharide 2015-09-25 2016-09-21 McGregor, N.,Yin, V.,Tung, C.C.,Van Petegem, F.,Brumer, H. Crystallographic insight into the evolutionary origins of xyloglucan endotransglycosylases and endohydrolases. Plant J. 2017 89 651 670 5G65 27607918 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with quinolin-2-amine 2016-06-18 2016-09-21 Holden, J.K.,Lewis, M.C.,Cinelli, M.A.,Abdullatif, Z.,Pensa, A.V.,Silverman, R.B.,Poulos, T.L. Targeting Bacterial Nitric Oxide Synthase with Aminoquinoline-Based Inhibitors. Biochemistry 2016 55 5587 5594 5G66 27607918 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 4-methylquinolin-2-amine 2016-06-18 2016-09-21 Holden, J.K.,Lewis, M.C.,Cinelli, M.A.,Abdullatif, Z.,Pensa, A.V.,Silverman, R.B.,Poulos, T.L. Targeting Bacterial Nitric Oxide Synthase with Aminoquinoline-Based Inhibitors. Biochemistry 2016 55 5587 5594 5G69 27607918 Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 7-(2-(3-Fluorobenzylamino)ethyl)quinolin-2-amine 2016-06-18 2016-09-21 Holden, J.K.,Lewis, M.C.,Cinelli, M.A.,Abdullatif, Z.,Pensa, A.V.,Silverman, R.B.,Poulos, T.L. Targeting Bacterial Nitric Oxide Synthase with Aminoquinoline-Based Inhibitors. Biochemistry 2016 55 5587 5594 5I59 27618671 Glutamate- and glycine-bound GluN1/GluN2A agonist binding domains with MPX 007 2016-02-14 2016-09-21 Yi, F.,Mou, T.C.,Dorsett, K.N.,Volkmann, R.A.,Menniti, F.S.,Sprang, S.R.,Hansen, K.B. Structural Basis for Negative Allosteric Modulation of GluN2A-Containing NMDA Receptors. Neuron 2016 91 1316 1329 5KVQ 27601130 NADP+ bound structure of Irp3, a Thiazolinyl Imine Reductase from Yersinia enterocolitica 2016-07-15 2016-09-21 Meneely, K.M.,Ronnebaum, T.A.,Riley, A.P.,Prisinzano, T.E.,Lamb, A.L. Holo Structure and Steady State Kinetics of the Thiazolinyl Imine Reductases for Siderophore Biosynthesis. Biochemistry 2016 55 5423 5433 5KVS 27601130 Substrate Analog and NADP+ bound structure of Irp3, a Thiazolinyl Imine Reductase from Yersinia enterocolitica 2016-07-15 2016-09-21 Meneely, K.M.,Ronnebaum, T.A.,Riley, A.P.,Prisinzano, T.E.,Lamb, A.L. Holo Structure and Steady State Kinetics of the Thiazolinyl Imine Reductases for Siderophore Biosynthesis. Biochemistry 2016 55 5423 5433 5DRZ 27827447 Crystal structure of anti-HIV-1 antibody F240 Fab in complex with gp41 peptide 2015-09-16 2016-10-19 Gohain, N.,Tolbert, W.D.,Orlandi, C.,Richard, J.,Ding, S.,Chen, X.,Bonsor, D.A.,Sundberg, E.J.,Lu, W.,Ray, K.,Finzi, A.,Lewis, G.K.,Pazgier, M. Molecular basis for epitope recognition by non-neutralizing anti-gp41 antibody F240. Sci Rep 2016 6 36685 36685 5EVF 28994410 Crystal structure of a Francisella virulence factor FvfA in the hexagonal form 2015-11-19 2016-10-26 Kolappan, S.,Lo, K.Y.,Shen, C.L.J.,Guttman, J.A.,Craig, L. Structure of the conserved Francisella virulence protein FvfA. Acta Crystallogr D Struct Biol 2017 73 814 821 5EVG 28994410 Crystal structure of a Francisella virulence factor FvfA in the orthorhombic form 2015-11-19 2016-10-26 Kolappan, S.,Lo, K.Y.,Shen, C.L.J.,Guttman, J.A.,Craig, L. Structure of the conserved Francisella virulence protein FvfA. Acta Crystallogr D Struct Biol 2017 73 814 821 5T5D 28168775 Crystal Structure of the PTS IIB protein associated with the fucose utilization operon from Streptococcus pneumoniae 2016-08-30 2016-10-26 Higgins, M.A.,Hamilton, A.M.,Boraston, A.B. Structural characterization of the PTS IIA and IIB proteins associated with pneumococcal fucose utilization. Proteins 2017 85 963 968 5SWJ 27770024 Crystal Structure of ATPase delta1-79 Spa47 2016-08-08 2016-11-02 Burgess, J.L.,Burgess, R.A.,Morales, Y.,Bouvang, J.M.,Johnson, S.J.,Dickenson, N.E. Structural and Biochemical Characterization of Spa47 Provides Mechanistic Insight into Type III Secretion System ATPase Activation and Shigella Virulence Regulation. J. Biol. Chem. 2016 291 25837 25852 5TD4 27756128 Starch binding sites on the Human pancreatic alpha amylase D300N variant complexed with an octaose substrate. 2016-09-16 2016-11-02 Zhang, X.,Caner, S.,Kwan, E.,Li, C.,Brayer, G.D.,Withers, S.G. Evaluation of the Significance of Starch Surface Binding Sites on Human Pancreatic alpha-Amylase. Biochemistry 2016 55 6000 6009 5FH3 26709450 The structure of rat cytosolic PEPCK variant E89A in complex with oxalic acid and GTP 2015-12-21 2016-11-09 Johnson, T.A.,Mcleod, M.J.,Holyoak, T. Utilization of Substrate Intrinsic Binding Energy for Conformational Change and Catalytic Function in Phosphoenolpyruvate Carboxykinase. Biochemistry 2016 55 575 587 5FH4 26709450 The structure of rat cytosolic PEPCK variant E89D in complex with beta-sulfopyruvate and GTP 2015-12-21 2016-11-09 Johnson, T.A.,Mcleod, M.J.,Holyoak, T. Utilization of Substrate Intrinsic Binding Energy for Conformational Change and Catalytic Function in Phosphoenolpyruvate Carboxykinase. Biochemistry 2016 55 575 587 5FH5 26709450 The structure of rat cytosolic PEPCK variant E89Q in complex with phosphoglycolate and GDP 2015-12-21 2016-11-09 Johnson, T.A.,Mcleod, M.J.,Holyoak, T. Utilization of Substrate Intrinsic Binding Energy for Conformational Change and Catalytic Function in Phosphoenolpyruvate Carboxykinase. Biochemistry 2016 55 575 587 5JYX 27802572 Crystal structure of the covalent thioimide intermediate of the archaeosine synthase QueF-Like 2016-05-15 2016-11-09 Mei, X.,Alvarez, J.,Bon Ramos, A.,Samanta, U.,Iwata-Reuyl, D.,Swairjo, M.A. Crystal structure of the archaeosine synthase QueF-like-Insights into amidino transfer and tRNA recognition by the tunnel fold. Proteins 2017 85 103 116 5K0P 27802572 Crystal structure of the archaeosine synthase QueF-Like in the apo form 2016-05-17 2016-11-09 Mei, X.,Alvarez, J.,Bon Ramos, A.,Samanta, U.,Iwata-Reuyl, D.,Swairjo, M.A. Crystal structure of the archaeosine synthase QueF-like-Insights into amidino transfer and tRNA recognition by the tunnel fold. Proteins 2017 85 103 116 5FMH Crystal structure of the E405K mutant of human apoptosis inducing factor 2015-11-04 2016-11-23 Sevrioukova, I. Novel Mutation in Aifm1 To be Published 0 0 0 0 5EOT 28179428 Structure of HLA-A2:01 with peptide G13E 2015-11-10 2016-12-07 Remesh, S.G.,Andreatta, M.,Ying, G.,Kaever, T.,Nielsen, M.,McMurtrey, C.,Hildebrand, W.,Peters, B.,Zajonc, D.M. Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT. J. Biol. Chem. 2017 292 5262 5270 5SWI 28056108 Crystal structure of SpGH92 in complex with mannose 2016-08-08 2016-12-14 Robb, M.,Hobbs, J.K.,Woodiga, S.A.,Shapiro-Ward, S.,Suits, M.D.,McGregor, N.,Brumer, H.,Yesilkaya, H.,King, S.J.,Boraston, A.B. Molecular Characterization of N-glycan Degradation and Transport in Streptococcus pneumoniae and Its Contribution to Virulence. PLoS Pathog. 2017 13 0 0 5F7D 28179428 Structure of HLA-A2:01 with peptide G11N 2015-12-07 2016-12-21 Remesh, S.G.,Andreatta, M.,Ying, G.,Kaever, T.,Nielsen, M.,McMurtrey, C.,Hildebrand, W.,Peters, B.,Zajonc, D.M. Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT. J. Biol. Chem. 2017 292 5262 5270 5FA3 28179428 Structure of HLA-A2:01 with peptide G9V 2015-12-10 2016-12-21 Remesh, S.G.,Andreatta, M.,Ying, G.,Kaever, T.,Nielsen, M.,McMurtrey, C.,Hildebrand, W.,Peters, B.,Zajonc, D.M. Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT. J. Biol. Chem. 2017 292 5262 5270 5FA4 28179428 Structure of HLA-A2:01 with peptide Y16R 2015-12-10 2016-12-21 Remesh, S.G.,Andreatta, M.,Ying, G.,Kaever, T.,Nielsen, M.,McMurtrey, C.,Hildebrand, W.,Peters, B.,Zajonc, D.M. Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT. J. Biol. Chem. 2017 292 5262 5270 5HF0 Staphylococcus aureus Dihydrofolate Reductase complexed with beta-NADPH, cyclic alpha-NADPH anomer and 3'-(3-(2,4-diamino-6-ethylpyrimidin-5-yl)prop-2-yn-1-yl)-4'-methoxy-[1,1'-biphenyl]-4-carboxylic acid (UCP1106) 2016-01-06 2017-01-18 Anderson, A.C.,Reeve, S.M. Staphylococcus aureus Dihydrofolate Reductase complexed with NADPH and 6-ETHYL-5-[(3S)-3-[3-METHOXY-5-(PYRIDIN-4-YL)PHENYL]BUT-1-YN-1-YL]PYRIMIDINE-2,4-DIAMINE (UCP1106) To Be Published 0 0 0 0 5TUN 28049758 Crystal structure of uninhibited human Cathepsin K at 1.62 Angstrom resolution 2016-11-06 2017-01-18 Law, S.,Andrault, P.M.,Aguda, A.H.,Nguyen, N.T.,Kruglyak, N.,Brayer, G.D.,Bromme, D. Identification of mouse cathepsin K structural elements that regulate the potency of odanacatib. Biochem. J. 2017 474 851 864 5I0W 32780051 IRON AND COPPER-BOUND P19 FROM CAMPYLOBACTER JEJUNI UNDER REDUCING CONDITIONS 2016-02-04 2017-02-08 Chan, A.C.K.,Lin, H.,Koch, D.,Grass, G.,Nies, D.H.,Murphy, M.E.P. A copper site is required for iron transport by the periplasmic proteins P19 and FetP. Metallomics 2020 12 1530 1541 5I0X 32780051 COPPER-BOUND M90I VARIANT OF UROPATHOGENIC ESCHERICHIA COLI STRAIN F11 FETP 2016-02-04 2017-02-08 Chan, A.C.K.,Lin, H.,Koch, D.,Grass, G.,Nies, D.H.,Murphy, M.E.P. A copper site is required for iron transport by the periplasmic proteins P19 and FetP. Metallomics 2020 12 1530 1541 5I0X 32780051 COPPER-BOUND M90I VARIANT OF UROPATHOGENIC ESCHERICHIA COLI STRAIN F11 FETP 2016-02-04 2017-02-08 Chan, A.C.K.,Lin, H.,Koch, D.,Grass, G.,Nies, D.H.,Murphy, M.E.P. A copper site is required for iron transport by the periplasmic proteins P19 and FetP. Metallomics 2020 12 1530 1541 5I0Y 32780051 COPPER-BOUND E46Q VARIANT OF UROPATHOGENIC ESCHERICHIA COLI STRAIN F11 FETP 2016-02-04 2017-02-08 Chan, A.C.K.,Lin, H.,Koch, D.,Grass, G.,Nies, D.H.,Murphy, M.E.P. A copper site is required for iron transport by the periplasmic proteins P19 and FetP. Metallomics 2020 12 1530 1541 5I0Y 32780051 COPPER-BOUND E46Q VARIANT OF UROPATHOGENIC ESCHERICHIA COLI STRAIN F11 FETP 2016-02-04 2017-02-08 Chan, A.C.K.,Lin, H.,Koch, D.,Grass, G.,Nies, D.H.,Murphy, M.E.P. A copper site is required for iron transport by the periplasmic proteins P19 and FetP. Metallomics 2020 12 1530 1541 5TKR 28196882 Crystal structure of a Lipomyces starkeyi levoglucosan kinase G359R mutant 2016-10-07 2017-02-08 Klesmith, J.R.,Bacik, J.P.,Wrenbeck, E.E.,Michalczyk, R.,Whitehead, T.A. Trade-offs between enzyme fitness and solubility illuminated by deep mutational scanning. Proc. Natl. Acad. Sci. U.S.A. 2017 114 2265 2270 5UGR 28177317 Malyl-CoA lyase from Methylobacterium extorquens 2017-01-09 2017-02-08 Gonzalez, J.M.,Marti-Arbona, R.,Chen, J.C.,Unkefer, C.J. Structure of Methylobacterium extorquens malyl-CoA lyase: CoA-substrate binding correlates with domain shift. Acta Crystallogr F Struct Biol 2017 73 79 85 5ULV 30279311 Malate dehydrogenase from Methylobacterium extorquens 2017-01-25 2017-02-08 Gonzalez, J.M.,Marti-Arbona, R.,Chen, J.C.H.,Broom-Peltz, B.,Unkefer, C.J. Conformational changes on substrate binding revealed by structures of Methylobacterium extorquens malate dehydrogenase. Acta Crystallogr F Struct Biol 2018 74 610 616 5ULV 30279311 Malate dehydrogenase from Methylobacterium extorquens 2017-01-25 2017-02-08 Gonzalez, J.M.,Marti-Arbona, R.,Chen, J.C.H.,Broom-Peltz, B.,Unkefer, C.J. Conformational changes on substrate binding revealed by structures of Methylobacterium extorquens malate dehydrogenase. Acta Crystallogr F Struct Biol 2018 74 610 616 5KO7 28157283 Crystal structure of haliscomenobacter hydrossis iodotyrosine deiodinase (IYD) bound to FMN 2016-06-29 2017-02-15 Ingavat, N.,Kavran, J.M.,Sun, Z.,Rokita, S.E. Active Site Binding Is Not Sufficient for Reductive Deiodination by Iodotyrosine Deiodinase. Biochemistry 2017 56 1130 1139 5ILS 28161714 Autoinhibited ETV1 2016-03-04 2017-02-22 Currie, S.L.,Lau, D.K.W.,Doane, J.J.,Whitby, F.G.,Okon, M.,McIntosh, L.P.,Graves, B.J. Structured and disordered regions cooperatively mediate DNA-binding autoinhibition of ETS factors ETV1, ETV4 and ETV5. Nucleic Acids Res. 2017 45 2223 2241 5ILU 28161714 Autoinhibited ETV4 2016-03-04 2017-02-22 Currie, S.L.,Lau, D.K.W.,Doane, J.J.,Whitby, F.G.,Okon, M.,McIntosh, L.P.,Graves, B.J. Structured and disordered regions cooperatively mediate DNA-binding autoinhibition of ETS factors ETV1, ETV4 and ETV5. Nucleic Acids Res. 2017 45 2223 2241 5ILV 28161714 Uninhibited ETV5 2016-03-04 2017-02-22 Currie, S.L.,Lau, D.K.W.,Doane, J.J.,Whitby, F.G.,Okon, M.,McIntosh, L.P.,Graves, B.J. Structured and disordered regions cooperatively mediate DNA-binding autoinhibition of ETS factors ETV1, ETV4 and ETV5. Nucleic Acids Res. 2017 45 2223 2241 5JUR 28197322 PB2 bound to an azaindole inhibitor 2016-05-10 2017-03-01 Farmer, L.J.,Clark, M.P.,Boyd, M.J.,Perola, E.,Jones, S.M.,Tsai, A.,Jacobs, M.D.,Bandarage, U.K.,Ledeboer, M.W.,Wang, T.,Deng, H.,Ledford, B.,Gu, W.,Duffy, J.P.,Bethiel, R.S.,Shannon, D.,Byrn, R.A.,Leeman, J.R.,Rijnbrand, R.,Bennett, H.B.,O'Brien, C.,Memmott, C.,Nti-Addae, K.,Bennani, Y.L.,Charifson, P.S. Discovery of Novel, Orally Bioavailable beta-Amino Acid Azaindole Inhibitors of Influenza PB2. ACS Med Chem Lett 2017 8 256 260 5IRQ 28373265 Human cytochrome P450 17A1 bound to inhibitors (R)- and (S)- orteronel 2016-03-14 2017-03-15 Petrunak, E.M.,Rogers, S.A.,Aube, J.,Scott, E.E. Structural and Functional Evaluation of Clinically Relevant Inhibitors of Steroidogenic Cytochrome P450 17A1. Drug Metab. Dispos. 2017 45 635 645 5UQC 28277940 Crystal structure of mouse CRMP2 2017-02-07 2017-03-22 Dustrude, E.T.,Perez-Miller, S.,Francois-Moutal, L.,Moutal, A.,Khanna, M.,Khanna, R. A single structurally conserved SUMOylation site in CRMP2 controls NaV1.7 function. Channels (Austin) 2017 11 316 328 5K89 28368280 Crystal Structure of Human Calcium-Bound S100A1 2016-05-27 2017-04-12 Melville, Z.,Aligholizadeh, E.,McKnight, L.E.,Weber, D.J.,Pozharski, E.,Weber, D.J. X-ray crystal structure of human calcium-bound S100A1. Acta Crystallogr F Struct Biol 2017 73 215 221 5V1Z 28442575 Crystal structure of the RPN13 PRU-RPN2 (932-953)-ubiquitin complex 2017-03-02 2017-05-03 VanderLinden, R.T.,Hemmis, C.W.,Yao, T.,Robinson, H.,Hill, C.P. Structure and energetics of pairwise interactions between proteasome subunits RPN2, RPN13, and ubiquitin clarify a substrate recruitment mechanism. J. Biol. Chem. 2017 292 9493 9504 5V7T 28315326 crystal structure of PARP14 bound to N-{4-[4-(diphenylmethoxy)piperidin-1-yl]butyl}[1,2,4]triazolo[4,3-b]pyridazin-6-amine inhibitor 2017-03-20 2017-05-03 Yoneyama-Hirozane, M.,Matsumoto, S.I.,Toyoda, Y.,Saikatendu, K.S.,Zama, Y.,Yonemori, K.,Oonishi, M.,Ishii, T.,Kawamoto, T. Identification of PARP14 inhibitors using novel methods for detecting auto-ribosylation. Biochem. Biophys. Res. Commun. 2017 486 626 631 5JUN 28197322 PB2 bound to an azaindole inhibitor 2016-05-10 2017-05-17 Farmer, L.J.,Clark, M.P.,Boyd, M.J.,Perola, E.,Jones, S.M.,Tsai, A.,Jacobs, M.D.,Bandarage, U.K.,Ledeboer, M.W.,Wang, T.,Deng, H.,Ledford, B.,Gu, W.,Duffy, J.P.,Bethiel, R.S.,Shannon, D.,Byrn, R.A.,Leeman, J.R.,Rijnbrand, R.,Bennett, H.B.,O'Brien, C.,Memmott, C.,Nti-Addae, K.,Bennani, Y.L.,Charifson, P.S. Discovery of Novel, Orally Bioavailable beta-Amino Acid Azaindole Inhibitors of Influenza PB2. ACS Med Chem Lett 2017 8 256 260 5THH 28531329 Crystal structure of a human tyrosyl-tRNA synthetase mutant 2016-09-29 2017-05-17 Blocquel, D.,Li, S.,Wei, N.,Daub, H.,Sajish, M.,Erfurth, M.L.,Kooi, G.,Zhou, J.,Bai, G.,Schimmel, P.,Jordanova, A.,Yang, X.L. Alternative stable conformation capable of protein misinteraction links tRNA synthetase to peripheral neuropathy. Nucleic Acids Res. 2017 45 8091 8104 5U4Y 28475752 IgG Fc bound to 3 helix of the B-domain from Protein A 2016-12-06 2017-05-17 Ultsch, M.,Braisted, A.,Maun, H.R.,Eigenbrot, C. 3-2-1: Structural insights from stepwise shrinkage of a three-helix Fc-binding domain to a single helix. Protein Eng. Des. Sel. 2017 30 619 625 5U66 28475752 Modified single helix from the B-domain of protein A bound to IgG1 Fc 2016-12-07 2017-05-24 Ultsch, M.,Braisted, A.,Maun, H.R.,Eigenbrot, C. 3-2-1: Structural insights from stepwise shrinkage of a three-helix Fc-binding domain to a single helix. Protein Eng. Des. Sel. 2017 30 619 625 5VMQ 28833948 STRUCTURE OF THE R105A MUTANT CATALYTIC TRIMER OF ESCHERICHIA COLI ASPARTATE TRANSCARBAMOYLASE AT 2.0-A RESOLUTION 2017-04-28 2017-05-24 Endrizzi, J.A.,Beernink, P.T. Charge neutralization in the active site of the catalytic trimer of aspartate transcarbamoylase promotes diverse structural changes. Protein Sci. 2017 26 2221 2228 5T8U 28543853 Crystal structure of P. falciparum LipL1 in complex lipoate 2016-09-08 2017-05-31 Guerra, A.J.,Afanador, G.A.,Prigge, S.T. Crystal structure of lipoate-bound lipoate ligase 1, LipL1, from Plasmodium falciparum. Proteins 2017 85 1777 1783 5G5J 28919040 Crystal structure of human CYP3A4 bound to metformin 2016-05-25 2017-06-07 Guo, Z.,Sevrioukova, I.F.,Denisov, I.G.,Zhang, X.,Chiu, T.L.,Thomas, D.G.,Hanse, E.A.,Cuellar, R.A.D.,Grinkova, Y.V.,Langenfeld, V.W.,Swedien, D.S.,Stamschror, J.D.,Alvarez, J.,Luna, F.,Galvan, A.,Bae, Y.K.,Wulfkuhle, J.D.,Gallagher, R.I.,Petricoin, E.F.,Norris, B.,Flory, C.M.,Schumacher, R.J.,O'Sullivan, M.G.,Cao, Q.,Chu, H.,Lipscomb, J.D.,Atkins, W.M.,Gupta, K.,Kelekar, A.,Blair, I.A.,Capdevila, J.H.,Falck, J.R.,Sligar, S.G.,Poulos, T.L.,Georg, G.I.,Ambrose, E.,Potter, D.A. Heme Binding Biguanides Target Cytochrome P450-Dependent Cancer Cell Mitochondria. Cell Chem Biol 2017 24 1259 0 5USR 28634302 Crystal structure of human NFS1-ISD11 in complex with E. coli acyl-carrier protein at 3.09 angstroms 2017-02-13 2017-06-21 Cory, S.A.,Van Vranken, J.G.,Brignole, E.J.,Patra, S.,Winge, D.R.,Drennan, C.L.,Rutter, J.,Barondeau, D.P. Structure of human Fe-S assembly subcomplex reveals unexpected cysteine desulfurase architecture and acyl-ACP-ISD11 interactions. Proc. Natl. Acad. Sci. U.S.A. 2017 114 0 0 5ISP 27308944 Staphylococcus aureus F98Y Dihydrofolate Reductase mutant complexed with beta-NADPH and 3'-(3-(2,4-diamino-6-ethylpyrimidin-5-yl)prop-2-yn-1-yl)-4'-methoxy-[1,1'-biphenyl]-4-carboxylic acid (UCP1106) 2016-03-15 2017-06-28 Reeve, S.M.,Scocchera, E.,Ferreira, J.J.,G-Dayanandan, N.,Keshipeddy, S.,Wright, D.L.,Anderson, A.C. Charged Propargyl-Linked Antifolates Reveal Mechanisms of Antifolate Resistance and Inhibit Trimethoprim-Resistant MRSA Strains Possessing Clinically Relevant Mutations. J. Med. Chem. 2016 59 6493 6500 5ISQ 27308944 Staphylococcus aureus H30N, F98Y Dihydrofolate Reductase mutant complexed with beta-NADPH and 3'-(3-(2,4-diamino-6-ethylpyrimidin-5-yl)prop-2-yn-1-yl)-4'-methoxy-[1,1'-biphenyl]-4-carboxylic acid (UCP1106) 2016-03-15 2017-06-28 Reeve, S.M.,Scocchera, E.,Ferreira, J.J.,G-Dayanandan, N.,Keshipeddy, S.,Wright, D.L.,Anderson, A.C. Charged Propargyl-Linked Antifolates Reveal Mechanisms of Antifolate Resistance and Inhibit Trimethoprim-Resistant MRSA Strains Possessing Clinically Relevant Mutations. J. Med. Chem. 2016 59 6493 6500 5IST 27308944 Staphylococcus aureus Dihydrofolate Reductase complexed with beta-NADPH, cyclic alpha-NADPH anomer and 3'-(3-(2,4-diamino-6-ethylpyrimidin-5-yl)prop-2-yn-1-yl)-4'-methoxy-[1,1'-biphenyl]-4-carboxylic acid (UCP1106) 2016-03-15 2017-06-28 Reeve, S.M.,Scocchera, E.,Ferreira, J.J.,G-Dayanandan, N.,Keshipeddy, S.,Wright, D.L.,Anderson, A.C. Charged Propargyl-Linked Antifolates Reveal Mechanisms of Antifolate Resistance and Inhibit Trimethoprim-Resistant MRSA Strains Possessing Clinically Relevant Mutations. J. Med. Chem. 2016 59 6493 6500 5JKQ 28681555 Crystal structure of Plasmodium falciparum Pf3D7_0606800 (PfVFT1) 2016-04-26 2017-07-19 Parker, M.L.,Ramaswamy, R.,van Gordon, K.,Powell, C.J.,Bosch, J.,Boulanger, M.J. The structure of Plasmodium falciparum 3D7_0606800 reveals a bi-lobed architecture that supports re-annotation as a Venus Flytrap protein. Protein Sci. 2017 26 1878 1885 5IXW Crystal structure of the signaling protein complex 3 2016-03-23 2017-08-09 Kumar, V.,van den Akker, F. Crystal structure of the signaling protein complex 3 To Be Published 0 0 0 0 5IXX Crystal structure of the signaling protein complex 4 2016-03-23 2017-08-09 Kumar, V.,van den Akker, F. Crystal structure of the signaling protein complex 4 To Be Published 0 0 0 0 5VL7 28825733 PCSK9 complex with Fab33 2017-04-25 2017-08-16 Zhang, Y.,Ultsch, M.,Skelton, N.J.,Burdick, D.J.,Beresini, M.H.,Li, W.,Kong-Beltran, M.,Peterson, A.,Quinn, J.,Chiu, C.,Wu, Y.,Shia, S.,Moran, P.,Di Lello, P.,Eigenbrot, C.,Kirchhofer, D. Discovery of a cryptic peptide-binding site on PCSK9 and design of antagonists. Nat. Struct. Mol. Biol. 2017 24 848 856 5VUQ 28776992 Structure of rat neuronal nitric oxide synthase heme domain in complex with 4-(2-(((2-Aminoquinolin-7-yl)methyl)amino)ethyl)benzonitrile 2017-05-19 2017-08-16 Pensa, A.V.,Cinelli, M.A.,Li, H.,Chreifi, G.,Mukherjee, P.,Roman, L.J.,Martasek, P.,Poulos, T.L.,Silverman, R.B. Hydrophilic, Potent, and Selective 7-Substituted 2-Aminoquinolines as Improved Human Neuronal Nitric Oxide Synthase Inhibitors. J. Med. Chem. 2017 60 7146 7165 5T99 29535379 Crystal structure of BuGH2Awt in complex with Galactoisofagomine 2016-09-09 2017-09-13 Pluvinage, B.,Grondin, J.M.,Amundsen, C.,Klassen, L.,Moote, P.E.,Xiao, Y.,Thomas, D.,Pudlo, N.A.,Anele, A.,Martens, E.C.,Inglis, G.D.,Uwiera, R.E.R.,Boraston, A.B.,Abbott, D.W. Molecular basis of an agarose metabolic pathway acquired by a human intestinal symbiont. Nat Commun 2018 9 1043 1043 5T9G 29535379 Crystal structure of BuGH2Cwt in complex with Galactoisofagomine 2016-09-09 2017-09-13 Pluvinage, B.,Grondin, J.M.,Amundsen, C.,Klassen, L.,Moote, P.E.,Xiao, Y.,Thomas, D.,Pudlo, N.A.,Anele, A.,Martens, E.C.,Inglis, G.D.,Uwiera, R.E.R.,Boraston, A.B.,Abbott, D.W. Molecular basis of an agarose metabolic pathway acquired by a human intestinal symbiont. Nat Commun 2018 9 1043 1043 5TW2 28655912 Structure of mouse CD1d with bound alpha-galactosylsphingamide JG168 2016-11-11 2017-09-20 Guillaume, J.,Wang, J.,Janssens, J.,Remesh, S.G.,Risseeuw, M.D.P.,Decruy, T.,Froeyen, M.,Elewaut, D.,Zajonc, D.M.,Calenbergh, S.V. Galactosylsphingamides: new alpha-GalCer analogues to probe the F'-pocket of CD1d. Sci Rep 2017 7 4276 4276 5TW5 28655912 Structure of mouse CD1d with bound glycosphingolipid JJ112 2016-11-11 2017-09-20 Guillaume, J.,Wang, J.,Janssens, J.,Remesh, S.G.,Risseeuw, M.D.P.,Decruy, T.,Froeyen, M.,Elewaut, D.,Zajonc, D.M.,Calenbergh, S.V. Galactosylsphingamides: new alpha-GalCer analogues to probe the F'-pocket of CD1d. Sci Rep 2017 7 4276 4276 5USL 29123031 Structure of vaccinia virus D8 protein bound to human Fab vv304 2017-02-13 2017-09-20 Matho, M.H.,Schlossman, A.,Gilchuk, I.M.,Miller, G.,Mikulski, Z.,Hupfer, M.,Wang, J.,Bitra, A.,Meng, X.,Xiang, Y.,Kaever, T.,Doukov, T.,Ley, K.,Crotty, S.,Peters, B.,Hsieh-Wilson, L.C.,Crowe, J.E.,Zajonc, D.M. Structure-function characterization of three human antibodies targeting the vaccinia virus adhesion molecule D8. J. Biol. Chem. 2018 293 390 401 5TWC 28463500 Oxidoreductase IruO in the oxidized form 2016-11-12 2017-10-04 Kobylarz, M.J.,Heieis, G.A.,Loutet, S.A.,Murphy, M.E.P. Iron Uptake Oxidoreductase (IruO) Uses a Flavin Adenine Dinucleotide Semiquinone Intermediate for Iron-Siderophore Reduction. ACS Chem. Biol. 2017 12 1778 1786 5VO2 28929759 DLK in complex with inhibitor 5-(1-isopropyl-5-(1-(oxetan-3-yl)piperidin-4-yl)-1H-pyrazol-3-yl)-3-(trifluoromethyl)pyridin-2-amine (compound 7) 2017-05-01 2017-10-04 Patel, S.,Meilandt, W.J.,Erickson, R.I.,Chen, J.,Deshmukh, G.,Estrada, A.A.,Fuji, R.N.,Gibbons, P.,Gustafson, A.,Harris, S.F.,Imperio, J.,Liu, W.,Liu, X.,Liu, Y.,Lyssikatos, J.P.,Ma, C.,Yin, J.,Lewcock, J.W.,Siu, M. Selective Inhibitors of Dual Leucine Zipper Kinase (DLK, MAP3K12) with Activity in a Model of Alzheimer's Disease. J. Med. Chem. 2017 60 8083 8102 5VT9 28972141 Myosin Light chain 1 and MyoA complex 2017-05-16 2017-10-04 Powell, C.J.,Jenkins, M.L.,Parker, M.L.,Ramaswamy, R.,Kelsen, A.,Warshaw, D.M.,Ward, G.E.,Burke, J.E.,Boulanger, M.J. Dissecting the molecular assembly of the Toxoplasma gondii MyoA motility complex. J. Biol. Chem. 2017 292 19469 19477 5UQV 29045385 USP7 in complex with GNE6640 (4-(2-amino-4-ethyl-5-(1H-indazol-5-yl)pyridin-3-yl)phenol) 2017-02-08 2017-10-25 Kategaya, L.,Di Lello, P.,Rouge, L.,Pastor, R.,Clark, K.R.,Drummond, J.,Kleinheinz, T.,Lin, E.,Upton, J.P.,Prakash, S.,Heideker, J.,McCleland, M.,Ritorto, M.S.,Alessi, D.R.,Trost, M.,Bainbridge, T.W.,Kwok, M.C.M.,Ma, T.P.,Stiffler, Z.,Brasher, B.,Tang, Y.,Jaishankar, P.,Hearn, B.R.,Renslo, A.R.,Arkin, M.R.,Cohen, F.,Yu, K.,Peale, F.,Gnad, F.,Chang, M.T.,Klijn, C.,Blackwood, E.,Martin, S.E.,Forrest, W.F.,Ernst, J.A.,Ndubaku, C.,Wang, X.,Beresini, M.H.,Tsui, V.,Schwerdtfeger, C.,Blake, R.A.,Murray, J.,Maurer, T.,Wertz, I.E. USP7 small-molecule inhibitors interfere with ubiquitin binding. Nature 2017 550 534 538 5VCL 28767728 Structure of the Qdm peptide bound to Qa-1a 2017-03-31 2017-10-25 Ying, G.,Wang, J.,Kumar, V.,Zajonc, D.M. Crystal structure of Qa-1a with bound Qa-1 determinant modifier peptide. PLoS ONE 2017 12 0 0 5IXZ Crystal structure of the signaling protein complex 5 2016-03-23 2017-11-01 Kumar, V.,van den Akker, F. Crystal structure of the signaling protein complex 5 To Be Published 0 0 0 0 5VEU 29093019 Human Cytochrome P450 3A5 (CYP3A5) 2017-04-05 2017-11-15 Hsu, M.H.,Savas, U.,Johnson, E.F. The X-Ray Crystal Structure of the Human Mono-Oxygenase Cytochrome P450 3A5-Ritonavir Complex Reveals Active Site Differences between P450s 3A4 and 3A5. Mol. Pharmacol. 2018 93 14 24 5VMM 29109153 Staphylococcus aureus IsdB bound to human hemoglobin 2017-04-27 2017-11-15 Bowden, C.F.M.,Chan, A.C.K.,Li, E.J.W.,Arrieta, A.L.,Eltis, L.D.,Murphy, M.E.P. Structure-function analyses reveal key features in Staphylococcus aureus IsdB-associated unfolding of the heme-binding pocket of human hemoglobin. J. Biol. Chem. 2018 293 177 190 5W4L 29056481 Crystal structure of the non-neutralizing and ADCC-potent C11-like antibody N12-i3 in complex with HIV-1 clade A/E gp120, the CD4 mimetic M48U1, and the antibody N5-i5. 2017-06-12 2017-11-15 Tolbert, W.D.,Gohain, N.,Alsahafi, N.,Van, V.,Orlandi, C.,Ding, S.,Martin, L.,Finzi, A.,Lewis, G.K.,Ray, K.,Pazgier, M. Targeting the Late Stage of HIV-1 Entry for Antibody-Dependent Cellular Cytotoxicity: Structural Basis for Env Epitopes in the C11 Region. Structure 2017 25 1719 0 5WDM 29114035 An ultra-stable single-chain insulin analog resists thermal inactivation and exhibits biological signaling duration equivalent to the native protein 2017-07-05 2017-11-15 Glidden, M.D.,Aldabbagh, K.,Phillips, N.B.,Carr, K.,Chen, Y.S.,Whittaker, J.,Phillips, M.,Wickramasinghe, N.P.,Rege, N.,Swain, M.,Peng, Y.,Yang, Y.,Lawrence, M.C.,Yee, V.C.,Ismail-Beigi, F.,Weiss, M.A. An ultra-stable single-chain insulin analog resists thermal inactivation and exhibits biological signaling duration equivalent to the native protein. J. Biol. Chem. 2018 293 47 68 6B9J 29123031 Structure of vaccinia virus D8 protein bound to human Fab vv138 2017-10-10 2017-11-22 Matho, M.H.,Schlossman, A.,Gilchuk, I.M.,Miller, G.,Mikulski, Z.,Hupfer, M.,Wang, J.,Bitra, A.,Meng, X.,Xiang, Y.,Kaever, T.,Doukov, T.,Ley, K.,Crotty, S.,Peters, B.,Hsieh-Wilson, L.C.,Crowe, J.E.,Zajonc, D.M. Structure-function characterization of three human antibodies targeting the vaccinia virus adhesion molecule D8. J. Biol. Chem. 2018 293 390 401 5UJI 28910573 Crystal structure of human T2-Tryptophanyl-tRNA synthetase with H130R mutation 2017-01-18 2018-01-17 Xu, X.,Zhou, H.,Zhou, Q.,Hong, F.,Vo, M.N.,Niu, W.,Wang, Z.,Xiong, X.,Nakamura, K.,Wakasugi, K.,Schimmel, P.,Yang, X.L. An alternative conformation of human TrpRS suggests a role of zinc in activating non-enzymatic function. RNA Biol 2018 15 649 658 5UJJ 28910573 Crystal structure of human H130R tryptophanyl-tRNA synthetase in complex with TrpAMP 2017-01-18 2018-01-17 Xu, X.,Zhou, H.,Zhou, Q.,Hong, F.,Vo, M.N.,Niu, W.,Wang, Z.,Xiong, X.,Nakamura, K.,Wakasugi, K.,Schimmel, P.,Yang, X.L. An alternative conformation of human TrpRS suggests a role of zinc in activating non-enzymatic function. RNA Biol 2018 15 649 658 5V23 SeMet crystal structure of the Neisseria meningitidis non-core minor pilin PilV in the orthorhombic form 2017-03-02 2018-02-07 Kolappan, S.,Craig, L. SeMet structure of the non-core minor pilin PilV from Neisseria meningitidis in the orthorhombic form To Be Published 0 0 0 0 5UWZ Protein 12 with aldehyde deformylating oxygenase activity from Gloeobacter violaceus 2017-02-21 2018-02-28 Wilson, D.K.,Mak, W.S.,Siegel, J.B. Protein 12 with aldehyde deformylating oxygenase activity from Gloeobacter violaceus To Be Published 0 0 0 0 5UX1 Protein 43 with aldehyde deformylating oxygenase activity from Synechococcus 2017-02-21 2018-02-28 Wilson, D.K.,Mak, W.S.,Siegel, J.B. Protein 43 with aldehyde deformylating oxygenase activity from Synechococcus To Be Published 0 0 0 0 6CV6 Crystal structure of 3-dehydroquinate dehydratase, type II, from Burkholderia phymatum STM815 2018-03-27 2018-04-11 Abendroth, J.,Lorimer, D.D.,Horanyi, P.S.,Edwards, T.E. Crystal structure of 3-dehydroquinate dehydratase, type II, from Burkholderia phymatum STM815 to be published 0 0 0 0 5VEA HIV Protease (PR) with TL-3 in active site and 4-methylbenzene-1,2-diamine in exosite 2017-04-04 2018-04-25 Forli, S.,Tiefenbrunn, T.,Baksh, M.M.,Chang, M.W.,Perryman, A.,Garg, D.,Happer, M.,Lin, Y.-C.,Goodsell, D.,Angelina, E.L.,De Vera, I.,Kojetin, D.,Torbett, B.E.,Finn, M.G.,Elder, J.,Stout, C.D.,Olson, A. Fragment-based campaign for the identification of potential exosite binders of HIV-1 Protease to be published 0 0 0 0 5VM6 30033524 The hapten triclocarban bound to the single domain camelid nanobody VHH T10 2017-04-26 2018-05-02 Tabares-da Rosa, S.,Wogulis, L.A.,Wogulis, M.D.,Gonzalez-Sapienza, G.,Wilson, D.K. Structure and specificity of several triclocarban-binding single domain camelid antibody fragments. J. Mol. Recognit. 2019 32 0 0 6CPB 29708736 Crystal structure of the heme domain of CooA from Carboxydothermus hydrogenoformans 2018-03-13 2018-05-16 Tripathi, S.,Poulos, T.L. Testing the N-Terminal Velcro Model of CooA Carbon Monoxide Activation. Biochemistry 2018 57 3059 3064 5U0H 29968680 Crystal structure of GH family 9 endoglucanase J30 2016-11-24 2018-05-30 Ellinghaus, T.L.,Pereira, J.H.,McAndrew, R.P.,Welner, D.H.,DeGiovanni, A.M.,Guenther, J.M.,Tran, H.M.,Feldman, T.,Simmons, B.A.,Sale, K.L.,Adams, P.D. Engineering glycoside hydrolase stability by the introduction of zinc binding. Acta Crystallogr D Struct Biol 2018 74 702 710 6EJM 29778602 CRYSTAL STRUCTURE OF HUMAN CD81 LARGE EXTRACELLULAR LOOP IN COMPLEX WITH SINGLE CHAIN FV FRAGMENT 5 2017-09-22 2018-05-30 Nelson, B.,Adams, J.,Kuglstatter, A.,Li, Z.,Harris, S.F.,Liu, Y.,Bohini, S.,Ma, H.,Klumpp, K.,Gao, J.,Sidhu, S.S. Structure-Guided Combinatorial Engineering Facilitates Affinity and Specificity Optimization of Anti-CD81 Antibodies. J. Mol. Biol. 2018 430 2139 2152 6CK2 29880646 Insulin analog containing a YB26W mutation 2018-02-27 2018-06-13 Rege, N.K.,Wickramasinghe, N.P.,Tustan, A.N.,Phillips, N.F.B.,Yee, V.C.,Ismail-Beigi, F.,Weiss, M.A. Structure-based stabilization of insulin as a therapeutic protein assembly via enhanced aromatic-aromatic interactions. J. Biol. Chem. 2018 293 10895 10910 5W51 28933854 Pol II elongation complex with an N6-methyladenine-containing template and a matched UMPNPP 2017-06-13 2018-06-20 Wang, W.,Xu, L.,Hu, L.,Chong, J.,He, C.,Wang, D. Epigenetic DNA Modification N6-Methyladenine Causes Site-Specific RNA Polymerase II Transcriptional Pausing. J.Am.Chem.Soc. 2017 139 14436 14442 6DHY 29996654 Crystallogrpahic tetramer of Zn-bound RIDC1 variant bearing two disulfide bonded cysteines 2018-05-21 2018-07-25 Churchfield, L.A.,Alberstein, R.G.,Williamson, L.M.,Tezcan, F.A. Determining the Structural and Energetic Basis of Allostery in a De Novo Designed Metalloprotein Assembly. J. Am. Chem. Soc. 2018 140 10043 10053 5WMD 29386193 N-terminal bromodomain of BRD4 in complex with OTX-015 2017-07-28 2018-08-01 Ozer, H.G.,El-Gamal, D.,Powell, B.,Hing, Z.A.,Blachly, J.S.,Harrington, B.,Mitchell, S.,Grieselhuber, N.R.,Williams, K.,Lai, T.H.,Alinari, L.,Baiocchi, R.A.,Brinton, L.,Baskin, E.,Cannon, M.,Beaver, L.,Goettl, V.M.,Lucas, D.M.,Woyach, J.A.,Sampath, D.,Lehman, A.M.,Yu, L.,Zhang, J.,Ma, Y.,Zhang, Y.,Spevak, W.,Shi, S.,Severson, P.,Shellooe, R.,Carias, H.,Tsang, G.,Dong, K.,Ewing, T.,Marimuthu, A.,Tantoy, C.,Walters, J.,Sanftner, L.,Rezaei, H.,Nespi, M.,Matusow, B.,Habets, G.,Ibrahim, P.,Zhang, C.,Mathe, E.A.,Bollag, G.,Byrd, J.C.,Lapalombella, R. BRD4 Profiling Identifies Critical Chronic Lymphocytic Leukemia Oncogenic Circuits and Reveals Sensitivity to PLX51107, a Novel Structurally Distinct BET Inhibitor. Cancer Discov 2018 8 458 477 5WMG 29386193 N-terminal bromodomain of BRD4 in complex with OTX-015 2017-07-28 2018-08-01 Ozer, H.G.,El-Gamal, D.,Powell, B.,Hing, Z.A.,Blachly, J.S.,Harrington, B.,Mitchell, S.,Grieselhuber, N.R.,Williams, K.,Lai, T.H.,Alinari, L.,Baiocchi, R.A.,Brinton, L.,Baskin, E.,Cannon, M.,Beaver, L.,Goettl, V.M.,Lucas, D.M.,Woyach, J.A.,Sampath, D.,Lehman, A.M.,Yu, L.,Zhang, J.,Ma, Y.,Zhang, Y.,Spevak, W.,Shi, S.,Severson, P.,Shellooe, R.,Carias, H.,Tsang, G.,Dong, K.,Ewing, T.,Marimuthu, A.,Tantoy, C.,Walters, J.,Sanftner, L.,Rezaei, H.,Nespi, M.,Matusow, B.,Habets, G.,Ibrahim, P.,Zhang, C.,Mathe, E.A.,Bollag, G.,Byrd, J.C.,Lapalombella, R. BRD4 Profiling Identifies Critical Chronic Lymphocytic Leukemia Oncogenic Circuits and Reveals Sensitivity to PLX51107, a Novel Structurally Distinct BET Inhibitor. Cancer Discov 2018 8 458 477 6B1F 29627985 Crystal structure KPC-2 beta-lactamase complexed with WCK 4234 by soaking 2017-09-18 2018-08-01 Papp-Wallace, K.M.,Nguyen, N.Q.,Jacobs, M.R.,Bethel, C.R.,Barnes, M.D.,Kumar, V.,Bajaksouzian, S.,Rudin, S.D.,Rather, P.N.,Bhavsar, S.,Ravikumar, T.,Deshpande, P.K.,Patil, V.,Yeole, R.,Bhagwat, S.S.,Patel, M.V.,van den Akker, F.,Bonomo, R.A. Strategic Approaches to Overcome Resistance against Gram-Negative Pathogens Using beta-Lactamase Inhibitors and beta-Lactam Enhancers: Activity of Three Novel Diazabicyclooctanes WCK 5153, Zidebactam (WCK 5107), and WCK 4234. J. Med. Chem. 2018 61 4067 4086 6B1H 29627985 Crystal structure KPC-2 beta-lactamase complexed with WCK 4234 by co-crystallization 2017-09-18 2018-08-01 Papp-Wallace, K.M.,Nguyen, N.Q.,Jacobs, M.R.,Bethel, C.R.,Barnes, M.D.,Kumar, V.,Bajaksouzian, S.,Rudin, S.D.,Rather, P.N.,Bhavsar, S.,Ravikumar, T.,Deshpande, P.K.,Patil, V.,Yeole, R.,Bhagwat, S.S.,Patel, M.V.,van den Akker, F.,Bonomo, R.A. Strategic Approaches to Overcome Resistance against Gram-Negative Pathogens Using beta-Lactamase Inhibitors and beta-Lactam Enhancers: Activity of Three Novel Diazabicyclooctanes WCK 5153, Zidebactam (WCK 5107), and WCK 4234. J. Med. Chem. 2018 61 4067 4086 6B1J 29627985 Crystal structure KPC-2 beta-lactamase complexed with WCK 5107 by soaking 2017-09-18 2018-08-01 Papp-Wallace, K.M.,Nguyen, N.Q.,Jacobs, M.R.,Bethel, C.R.,Barnes, M.D.,Kumar, V.,Bajaksouzian, S.,Rudin, S.D.,Rather, P.N.,Bhavsar, S.,Ravikumar, T.,Deshpande, P.K.,Patil, V.,Yeole, R.,Bhagwat, S.S.,Patel, M.V.,van den Akker, F.,Bonomo, R.A. Strategic Approaches to Overcome Resistance against Gram-Negative Pathogens Using beta-Lactamase Inhibitors and beta-Lactam Enhancers: Activity of Three Novel Diazabicyclooctanes WCK 5153, Zidebactam (WCK 5107), and WCK 4234. J. Med. Chem. 2018 61 4067 4086 6B1W 29627985 Crystal structure KPC-2 beta-lactamase complexed with WCK 5107 by co-crystallization 2017-09-19 2018-08-01 Papp-Wallace, K.M.,Nguyen, N.Q.,Jacobs, M.R.,Bethel, C.R.,Barnes, M.D.,Kumar, V.,Bajaksouzian, S.,Rudin, S.D.,Rather, P.N.,Bhavsar, S.,Ravikumar, T.,Deshpande, P.K.,Patil, V.,Yeole, R.,Bhagwat, S.S.,Patel, M.V.,van den Akker, F.,Bonomo, R.A. Strategic Approaches to Overcome Resistance against Gram-Negative Pathogens Using beta-Lactamase Inhibitors and beta-Lactam Enhancers: Activity of Three Novel Diazabicyclooctanes WCK 5153, Zidebactam (WCK 5107), and WCK 4234. J. Med. Chem. 2018 61 4067 4086 6B1X 29627985 Crystal structure KPC-2 beta-lactamase complexed with WCK 5153 by soaking 2017-09-19 2018-08-01 Papp-Wallace, K.M.,Nguyen, N.Q.,Jacobs, M.R.,Bethel, C.R.,Barnes, M.D.,Kumar, V.,Bajaksouzian, S.,Rudin, S.D.,Rather, P.N.,Bhavsar, S.,Ravikumar, T.,Deshpande, P.K.,Patil, V.,Yeole, R.,Bhagwat, S.S.,Patel, M.V.,van den Akker, F.,Bonomo, R.A. Strategic Approaches to Overcome Resistance against Gram-Negative Pathogens Using beta-Lactamase Inhibitors and beta-Lactam Enhancers: Activity of Three Novel Diazabicyclooctanes WCK 5153, Zidebactam (WCK 5107), and WCK 4234. J. Med. Chem. 2018 61 4067 4086 6B1Y 29627985 Crystal structure KPC-2 beta-lactamase complexed with WCK 5153 by co-crystallization 2017-09-19 2018-08-01 Papp-Wallace, K.M.,Nguyen, N.Q.,Jacobs, M.R.,Bethel, C.R.,Barnes, M.D.,Kumar, V.,Bajaksouzian, S.,Rudin, S.D.,Rather, P.N.,Bhavsar, S.,Ravikumar, T.,Deshpande, P.K.,Patil, V.,Yeole, R.,Bhagwat, S.S.,Patel, M.V.,van den Akker, F.,Bonomo, R.A. Strategic Approaches to Overcome Resistance against Gram-Negative Pathogens Using beta-Lactamase Inhibitors and beta-Lactam Enhancers: Activity of Three Novel Diazabicyclooctanes WCK 5153, Zidebactam (WCK 5107), and WCK 4234. J. Med. Chem. 2018 61 4067 4086 6DGT 30015489 Selective PI3K beta inhibitor bound to PI3K delta 2018-05-18 2018-08-01 Chandrasekhar, J.,Dick, R.,Van Veldhuizen, J.,Koditek, D.,Lepist, E.I.,McGrath, M.E.,Patel, L.,Phillips, G.,Sedillo, K.,Somoza, J.R.,Therrien, J.,Till, N.A.,Treiberg, J.,Villasenor, A.G.,Zherebina, Y.,Perreault, S. Atropisomerism by Design: Discovery of a Selective and Stable Phosphoinositide 3-Kinase (PI3K) beta Inhibitor. J. Med. Chem. 2018 61 6858 6868 5VTL Structure of metacyclic invariant surface protein , Tb427.07.360, from Trypanosoma brucei. 2017-05-17 2018-08-08 Ramswamy, R.,Workman, S.D.,Boulanger, M.J. Structure of Tb427.07.360, an insect stage antigen from Trypanosoma brucei. to be published 0 0 0 0 6DR7 30110154 YopH PTP1B WPD loop Chimera 2 PTPase bound to vanadate 2018-06-11 2018-08-29 Moise, G.,Morales, Y.,Beaumont, V.,Caradonna, T.,Loria, J.P.,Johnson, S.J.,Hengge, A.C. A YopH PTP1B Chimera Shows the Importance of the WPD-Loop Sequence to the Activity, Structure, and Dynamics of Protein Tyrosine Phosphatases. Biochemistry 2018 57 5315 5326 6DR9 30110154 Crystal Structure of the YopH PTP1B Chimera 3 PTPase apo form 2018-06-11 2018-08-29 Moise, G.,Morales, Y.,Beaumont, V.,Caradonna, T.,Loria, J.P.,Johnson, S.J.,Hengge, A.C. A YopH PTP1B Chimera Shows the Importance of the WPD-Loop Sequence to the Activity, Structure, and Dynamics of Protein Tyrosine Phosphatases. Biochemistry 2018 57 5315 5326 6DT6 30110154 Crystal Structure of the YopH PTP1B Chimera 3 PTPase bound to vanadate 2018-06-15 2018-08-29 Moise, G.,Morales, Y.,Beaumont, V.,Caradonna, T.,Loria, J.P.,Johnson, S.J.,Hengge, A.C. A YopH PTP1B Chimera Shows the Importance of the WPD-Loop Sequence to the Activity, Structure, and Dynamics of Protein Tyrosine Phosphatases. Biochemistry 2018 57 5315 5326 6AYL Human adipocyte lipid-binding protein FABP4 in complex with fluorescein 2017-09-08 2018-09-12 Pozharski, E.,St John, F.S. To be published To Be Published 0 0 0 0 6DLH 30282808 Endo-fucoidan hydrolase MfFcnA4 from glycoside hydrolase family 107 2018-06-01 2018-10-03 Vickers, C.,Liu, F.,Abe, K.,Salama-Alber, O.,Jenkins, M.,Springate, C.M.K.,Burke, J.E.,Withers, S.G.,Boraston, A.B. Endo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to alpha-l-fucosidases from GH29. J. Biol. Chem. 2018 293 18296 18308 5T2Q Unliganded Human HVEM at 1.9A in P 1 21 1 2016-08-24 2018-10-24 Nemcovicova, I.,Zajonc, D.M. Unliganded Human HVEM at 1.9A in P 1 21 1 To Be Published 0 0 0 0 5T2R Unliganded Human HVEM at 2.1A in P 21 21 21 2016-08-24 2018-10-24 Nemcovicova, I.,Zajonc, D.M. Unliganded Human HVEM at 2.1A in P 21 21 21 To Be Published 0 0 0 0 6BIK 30756207 BTK complex with compound 7 2017-11-02 2018-11-07 Nittinger, E.,Gibbons, P.,Eigenbrot, C.,Davies, D.R.,Maurer, B.,Yu, C.L.,Kiefer, J.R.,Kuglstatter, A.,Murray, J.,Ortwine, D.F.,Tang, Y.,Tsui, V. Water molecules in protein-ligand interfaces. Evaluation of software tools and SAR comparison. J. Comput. Aided Mol. Des. 2019 33 307 330 6N3E 30567737 Structure of HIV Tat-specific factor 1 U2AF Homology Motif bound to U2AF ligand motif 4 2018-11-15 2019-01-02 Loerch, S.,Leach, J.R.,Horner, S.W.,Maji, D.,Jenkins, J.L.,Pulvino, M.J.,Kielkopf, C.L. The pre-mRNA splicing and transcription factor Tat-SF1 is a functional partner of the spliceosome SF3b1 subunit via a U2AF homology motif interface. J. Biol. Chem. 2019 294 2892 2902 6BL6 31130486 Crystallization of lipid A transporter MsbA from Salmonella typhimurium 2017-11-09 2019-01-09 Padayatti, P.S.,Lee, S.C.,Stanfield, R.L.,Wen, P.C.,Tajkhorshid, E.,Wilson, I.A.,Zhang, Q. Structural Insights into the Lipid A Transport Pathway in MsbA. Structure 2019 27 1114 0 6C83 31239342 Structure of Aurora A (122-403) bound to inhibitory Monobody Mb2 and AMPPCP 2018-01-24 2019-02-27 Zorba, A.,Nguyen, V.,Koide, A.,Hoemberger, M.,Zheng, Y.,Kutter, S.,Kim, C.,Koide, S.,Kern, D. Allosteric modulation of a human protein kinase with monobodies. Proc.Natl.Acad.Sci.USA 2019 116 13937 13942 6CKK 31583886 N. meningitidis CMP-sialic acid synthetase in the presence of CTP and Ca2+ 2018-02-28 2019-03-06 Matthews, M.M.,McArthur, J.B.,Li, Y.,Yu, H.,Chen, X.,Fisher, A.J. Catalytic Cycle ofNeisseria meningitidisCMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography. Biochemistry 2019 0 0 0 6CKL 31583886 N. meningitidis CMP-sialic acid synthetase in the presence of CMP and Neu5Ac2en 2018-02-28 2019-03-06 Matthews, M.M.,McArthur, J.B.,Li, Y.,Yu, H.,Chen, X.,Fisher, A.J. Catalytic Cycle ofNeisseria meningitidisCMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography. Biochemistry 2019 0 0 0 6CKM 31583886 N. meningitidis CMP-sialic acid synthetase in the presence of CMP-sialic acid and Ca2+ 2018-02-28 2019-03-06 Matthews, M.M.,McArthur, J.B.,Li, Y.,Yu, H.,Chen, X.,Fisher, A.J. Catalytic Cycle ofNeisseria meningitidisCMP-Sialic Acid Synthetase Illustrated by High-Resolution Protein Crystallography. Biochemistry 2019 0 0 0 6NTT X-ray Crystal Structure of Soybean Trypsin Inhibitor (Kunitz) Complexed with 1,5-Disulfonyl Naphthalene 2019-01-30 2019-03-20 McPherson, A.,Day, J.,Larson, S.B. Lattice Interactions in Crystals of Soybean Trypsin Inhibitor (Kunitz) Produced by Inclusion of 1,5-Disulfonylnaphthalene Cryst.Growth Des. 2019 19 2963 2969 6CTZ Structure of the GDP and kanamycin complex of APH(2"")-IIia 2018-03-23 2019-03-27 Smith, C.A.,Toth, M.,Stewart, N.K.,Maltz, L.,Vakulenko, S.B. Structural basis for the diversity of the mechanism of nucleotide hydrolysis by the aminoglycoside-2''-phosphotransferases Acta Crystallogr.,Sect.D 2019 75 1129 1137 6CW6 31391251 Structure of alpha-GC[8,18] bound by CD1d and in complex with the Va14Vb8.2 TCR 2018-03-29 2019-04-03 Wang, J.,Guillaume, J.,Janssens, J.,Remesh, S.G.,Ying, G.,Bitra, A.,Van Calenbergh, S.,Zajonc, D.M. A molecular switch in mouse CD1d modulates natural killer T cell activation by alpha-galactosylsphingamides. J.Biol.Chem. 2019 294 14345 14356 6CWB 31391251 Structure of alpha-GSA[8,4P] bound by CD1d and in complex with the Va14Vb8.2 TCR 2018-03-30 2019-04-03 Wang, J.,Guillaume, J.,Janssens, J.,Remesh, S.G.,Ying, G.,Bitra, A.,Van Calenbergh, S.,Zajonc, D.M. A molecular switch in mouse CD1d modulates natural killer T cell activation by alpha-galactosylsphingamides. J.Biol.Chem. 2019 294 14345 14356 6BDN Crystal structure of human TAO3 kinase binding ADP 2017-10-23 2019-04-10 Aleshin, A.E.,Bankton, L.A.,Pinkerton, A.,Liddington, R.C.,Courtneidge, S.A. Crystal structure of human TAO3 kinase binding ADP To Be Published 0 0 0 0 6CYW 31636468 Structure of sphingomyelin in complex with mouse CD1d 2018-04-06 2019-04-10 Melum, E.,Jiang, X.,Baker, K.D.,Macedo, M.F.,Fritsch, J.,Dowds, C.M.,Wang, J.,Pharo, A.,Kaser, A.,Tan, C.,Pereira, C.S.,Kelly, S.L.,Duan, J.,Karlsen, T.H.,Exley, M.A.,Schutze, S.,Zajonc, D.M.,Merrill, A.H.,Schuchman, E.H.,Zeissig, S.,Blumberg, R.S. Control of CD1d-restricted antigen presentation and inflammation by sphingomyelin. Nat.Immunol. 2019 20 1644 1655 6CXW Synaptotagmin 1 C2A beta4 chimera with enhanced PIP2 binding function 2018-04-04 2019-04-17 Evans, C.S.,Lou, X.,Bai, H.,Rice, A.M.,Salcido-Holguin, L.,Rodriguez, E.N.,Sutton, R.B.,Chapman, E.R. Engineering a C2-domain to bind PIP2 To Be Published 0 0 0 0 6NMQ 31179408 Hypoxia-Inducible Factor (HIF) Prolyl Hydroxylase 2 (PHD2) in Complex with the Carboxamide Analog JNJ43058171 2019-01-11 2019-04-24 Bembenek, S.D.,Venkatesan, H.,Peltier, H.M.,Rosen, M.D.,Barrett, T.D.,Kanelakis, K.C.,Palomino, H.L.,Brondstetter, T.I.,Mirzadegan, T.,Rabinowitz, M.H. Beyond Traditional Structure-Based Drug Design: The Role of Iron Complexation, Strain, and Water in the Binding of Inhibitors for Hypoxia-Inducible Factor Prolyl Hydroxylase 2. Acs Omega 2019 4 6703 6708 6NNQ 31045562 Non-covalent structure of SENP1 in complex with SUMO2 2019-01-15 2019-05-08 Ambaye, N.D. Noncovalent structure of SENP1 in complex with SUMO2. Acta Crystallogr.,Sect.F 2019 75 332 339 6EEL 31004665 Crystal Structure of Myoferlin C2A with divalent cation 2018-08-14 2019-05-22 Harsini, F.M.,Bui, A.A.,Rice, A.M.,Chebrolu, S.,Fuson, K.L.,Turtoi, A.,Bradberry, M.,Chapman, E.R.,Sutton, R.B. Structural Basis for the Distinct Membrane Binding Activity of the Homologous C2A Domains of Myoferlin and Dysferlin. J.Mol.Biol. 2019 431 2112 2126 6DJA 31009467 ZN-DEPENDENT 5/B/6 METALLO-BETA-LACTAMASE FROM BACILLUS CEREUS 2018-05-24 2019-05-29 Khan, N.H.,Bui, A.A.,Xiao, Y.,Sutton, R.B.,Shaw, R.W.,Wylie, B.J.,Latham, M.P. A DNA aptamer reveals an allosteric site for inhibition in metallo-beta-lactamases. Plos One 2019 14 0 0 6NQL 31896714 Crystal structure of fast switching M159T mutant of fluorescent protein Dronpa (Dronpa2), Y63(3-ClY) 2019-01-21 2019-06-12 Romei, M.G.,Lin, C.Y.,Mathews, I.I.,Boxer, S.G. Electrostatic control of photoisomerization pathways in proteins. Science 2020 367 76 79 6DV5 Oligomeric complex of a Hsp27 24-mer at 3.6 A resolution 2018-06-22 2019-06-26 Nappi, L.,Aguda, A.H.,Al Nakouzi, N.,Lelj Garolla, B.,Beraldi, E.,Lallous, N.,Thi, M.,Moore, S.,Battsogt, D.,Stoffeliene, S.,Ban, F.,Nguyen, N.T.,Saxena, N.,Dueva, E.,Yamazaki, T.,Zoubeidi, A.,Cherkasov, A.,Brayer, G.D.,Gleave, M. Structure-Guided Discovery of Ivermectin as an Inhibitor of Heat Shock Protein-27 Phosphorylation and Depolymerization. To Be Published 0 0 0 0 6OJR 31292192 Crystal structure of Sphingomonas paucimobilis TMY1009 apo-LsdA 2019-04-12 2019-07-24 Kuatsjah, E.,Verstraete, M.M.,Kobylarz, M.J.,Liu, A.K.N.,Murphy, M.E.P.,Eltis, L.D. Identification of functionally important residues and structural features in a bacterial lignostilbene dioxygenase. J.Biol.Chem. 2019 294 12911 12920 6OJW 31292192 Crystal structure of Sphingomonas paucimobilis TMY1009 holo-LsdA 2019-04-12 2019-07-24 Kuatsjah, E.,Verstraete, M.M.,Kobylarz, M.J.,Liu, A.K.N.,Murphy, M.E.P.,Eltis, L.D. Identification of functionally important residues and structural features in a bacterial lignostilbene dioxygenase. J.Biol.Chem. 2019 294 12911 12920 6OO9 31480231 Human CYP3A4 bound to a drug mibefradil 2019-04-22 2019-09-11 Sevrioukova, I.F. Structural Insights into the Interaction of Cytochrome P450 3A4 with Suicide Substrates: Mibefradil, Azamulin and 6',7'-Dihydroxybergamottin. Int J Mol Sci 2019 20 0 0 6J5S 31604935 Crystal structure of human HINT1 mutant complexing with AP5A 2019-01-11 2019-09-25 Yu, J.,Liu, Z.,Liang, Y.,Luo, F.,Zhang, J.,Tian, C.,Motzik, A.,Zheng, M.,Kang, J.,Zhong, G.,Liu, C.,Fang, P.,Guo, M.,Razin, E.,Wang, J. Second messenger Ap4A polymerizes target protein HINT1 to transduce signals in Fc epsilon RI-activated mast cells. Nat Commun 2019 10 4664 4664 6J64 31604935 Crystal structure of human HINT1 mutant complexing with AP4A 2019-01-14 2019-09-25 Yu, J.,Liu, Z.,Liang, Y.,Luo, F.,Zhang, J.,Tian, C.,Motzik, A.,Zheng, M.,Kang, J.,Zhong, G.,Liu, C.,Fang, P.,Guo, M.,Razin, E.,Wang, J. Second messenger Ap4A polymerizes target protein HINT1 to transduce signals in Fc epsilon RI-activated mast cells. Nat Commun 2019 10 4664 4664 6MYO 34089891 Avian mitochondrial complex II with flutolanyl bound 2018-11-02 2019-11-06 Huang, L.S.,Lummen, P.,Berry, E.A. Crystallographic investigation of the ubiquinone binding site of respiratory Complex II and its inhibitors. Biochim Biophys Acta Proteins 2021 1869 140679 140679 6MRJ Crystal structure of H.pylori NikR in complex with DNA 2018-10-13 2019-11-20 Pozharski, E.,de Serrano, V. Crystal structure of H.pylori NikR in complex with DNA To Be Published 0 0 0 0 6NI4 31801874 Pseudomonas fluorescens isocyanide hydratase at 277 K G150T mutant 2018-12-26 2019-11-20 Dasgupta, M.,Budday, D.,de Oliveira, S.H.P.,Madzelan, P.,Marchany-Rivera, D.,Seravalli, J.,Hayes, B.,Sierra, R.G.,Boutet, S.,Hunter, M.S.,Alonso-Mori, R.,Batyuk, A.,Wierman, J.,Lyubimov, A.,Brewster, A.S.,Sauter, N.K.,Applegate, G.A.,Tiwari, V.K.,Berkowitz, D.B.,Thompson, M.C.,Cohen, A.E.,Fraser, J.S.,Wall, M.E.,van den Bedem, H.,Wilson, M.A. Mix-and-inject XFEL crystallography reveals gated conformational dynamics during enzyme catalysis. Proc.Natl.Acad.Sci.USA 2019 116 25634 25640 6NI7 31801874 Pseudomonas fluorescens isocyanide hydratase at 277 K 2018-12-26 2019-11-20 Dasgupta, M.,Budday, D.,de Oliveira, S.H.P.,Madzelan, P.,Marchany-Rivera, D.,Seravalli, J.,Hayes, B.,Sierra, R.G.,Boutet, S.,Hunter, M.S.,Alonso-Mori, R.,Batyuk, A.,Wierman, J.,Lyubimov, A.,Brewster, A.S.,Sauter, N.K.,Applegate, G.A.,Tiwari, V.K.,Berkowitz, D.B.,Thompson, M.C.,Cohen, A.E.,Fraser, J.S.,Wall, M.E.,van den Bedem, H.,Wilson, M.A. Mix-and-inject XFEL crystallography reveals gated conformational dynamics during enzyme catalysis. Proc.Natl.Acad.Sci.USA 2019 116 25634 25640 6NEJ scoulerine 9-O-methyltransferase from Thalictrum flavum complexed (13aS)-3,10-dimethoxy-5,8,13,13a-tetrahydro-6H-isoquino[3,2-a]isoquinoline-2,9-diol and with S-ADENOSYL-L-HOMOCYSTEINE 2018-12-17 2019-12-18 Valentic, T.R.,Smolke, C.S.,Payne, J.T. Structural and functional characterization of the scoulerine 9-O methyltransferase from Thalictrum flavum. To Be Published 0 0 0 0 6OOY 31857588 Asymmetric hTNF-alpha 2019-04-23 2019-12-25 O'Connell, J.,Porter, J.,Kroeplien, B.,Norman, T.,Rapecki, S.,Davis, R.,McMillan, D.,Arakaki, T.,Burgin, A.,Fox Iii, D.,Ceska, T.,Lecomte, F.,Maloney, A.,Vugler, A.,Carrington, B.,Cossins, B.P.,Bourne, T.,Lawson, A. Small molecules that inhibit TNF signalling by stabilising an asymmetric form of the trimer. Nat Commun 2019 10 5795 5795 6OP0 31857588 Asymmetric hTNF-alpha 2019-04-23 2019-12-25 O'Connell, J.,Porter, J.,Kroeplien, B.,Norman, T.,Rapecki, S.,Davis, R.,McMillan, D.,Arakaki, T.,Burgin, A.,Fox Iii, D.,Ceska, T.,Lecomte, F.,Maloney, A.,Vugler, A.,Carrington, B.,Cossins, B.P.,Bourne, T.,Lawson, A. Small molecules that inhibit TNF signalling by stabilising an asymmetric form of the trimer. Nat Commun 2019 10 5795 5795 6PYF 31852737 Sex Hormone-binding globulin mutant E176K in complex with Estradiol 2019-07-29 2019-12-25 Round, P.,Das, S.,Wu, T.S.,Wahala, K.,Van Petegem, F.,Hammond, G.L. Molecular interactions between sex hormone-binding globulin and nonsteroidal ligands that enhance androgen activity. J.Biol.Chem. 2020 295 1202 1211 6OFB 31911602 Crystal structure of human glutamine-dependent NAD+ synthetase complexed with NaAD+, AMP, pyrophosphate, and Mg2+ 2019-03-28 2020-01-08 Chuenchor, W.,Doukov, T.I.,Chang, K.T.,Resto, M.,Yun, C.S.,Gerratana, B. Different ways to transport ammonia in human and Mycobacterium tuberculosis NAD+synthetases. Nat Commun 2020 11 16 16 6NQT 32325029 GalNac-T2 soaked with UDP-sugar 2019-01-21 2020-01-29 Schumann, B.,Malaker, S.A.,Wisnovsky, S.P.,Debets, M.F.,Agbay, A.J.,Fernandez, D.,Wagner, L.J.S.,Lin, L.,Li, Z.,Choi, J.,Fox, D.M.,Peh, J.,Gray, M.A.,Pedram, K.,Kohler, J.J.,Mrksich, M.,Bertozzi, C.R. Bump-and-Hole Engineering Identifies Specific Substrates of Glycosyltransferases in Living Cells. Mol.Cell 2020 78 824 0 6PSA 31640718 PIE12 D-PEPTIDE AGAINST HIV ENTRY (IN COMPLEX WITH IQN17 Q577R RESISTANCE MUTANT) 2019-07-12 2020-02-05 Smith, A.R.,Weinstock, M.T.,Siglin, A.E.,Whitby, F.G.,Francis, J.N.,Hill, C.P.,Eckert, D.M.,Root, M.J.,Kay, M.S. Characterization of resistance to a potent D-peptide HIV entry inhibitor. Retrovirology 2019 16 28 28 6OBX 32206255 Montbretin A analogue M10-MbA in complex with Human pancreatic alpha-amylase 2019-03-21 2020-02-12 Tysoe, C.R.,Caner, S.,Calvert, M.B.,Win-Mason, A.,Brayer, G.D.,Withers, S.G. Synthesis of montbretin A analogues yields potent competitive inhibitors of human pancreatic alpha-amylase. Chem Sci 2019 10 11073 11077 6OCN 32206255 Montbretin A analogue M06-MbA in complex with Human pancreatic alpha-amylase 2019-03-25 2020-02-12 Tysoe, C.R.,Caner, S.,Calvert, M.B.,Win-Mason, A.,Brayer, G.D.,Withers, S.G. Synthesis of montbretin A analogues yields potent competitive inhibitors of human pancreatic alpha-amylase. Chem Sci 2019 10 11073 11077 6UI1 Crystal structure of BoNT/A-LCHn domain in complex with VHH ciA-D12, ciA-B5, and ciA-H7 2019-09-29 2020-03-04 Lam, K.,Tremblay, J.M.,Vazquez-Cintron, E.,Perry, K.,Ondeck, C.,Webb, R.,McNutt, P.M.,Shoemaker, C.B.,Jin, R. Structural Insights into Rational Design of Single-Domain Antibody-Based Antitoxins against Botulinum Neurotoxins Cell Rep 2020 30 2526 0 6OG8 33073990 Crystal structure of Green Fluorescent Protein (GFP); S65T, H148D with globally incorporated 3-F1Y; circular permutant (50-51) 2019-04-01 2020-04-08 Lin, C.Y.,Boxer, S.G. Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems. J.Phys.Chem.B 2020 124 9513 9525 6OG9 33073990 Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3,5-F2Y), H148D; circular permutant (50-51) 2019-04-02 2020-04-08 Lin, C.Y.,Boxer, S.G. Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems. J.Phys.Chem.B 2020 124 9513 9525 6TZ3 32362337 Crystal Structure of Human Synaptotagmin 1 C2B without Ca2+ 2019-08-09 2020-05-13 Bradberry, M.M.,Courtney, N.A.,Dominguez, M.J.,Lofquist, S.M.,Knox, A.T.,Sutton, R.B.,Chapman, E.R. Molecular Basis for Synaptotagmin-1-Associated Neurodevelopmental Disorder. Neuron 2020 107 52 0 6U41 32362337 1.7 angstrom structure of a pathogenic human Syt 1 C2B (D304G) 2019-08-22 2020-05-13 Bradberry, M.M.,Courtney, N.A.,Dominguez, M.J.,Lofquist, S.M.,Knox, A.T.,Sutton, R.B.,Chapman, E.R. Molecular Basis for Synaptotagmin-1-Associated Neurodevelopmental Disorder. Neuron 2020 107 52 0 6U4U 32362337 1.3 A structure of a pathogenic human Syt 1 C2B (I368T) 2019-08-26 2020-05-13 Bradberry, M.M.,Courtney, N.A.,Dominguez, M.J.,Lofquist, S.M.,Knox, A.T.,Sutton, R.B.,Chapman, E.R. Molecular Basis for Synaptotagmin-1-Associated Neurodevelopmental Disorder. Neuron 2020 107 52 0 6U4W 32362337 1.4 A structure of a pathogenic human Syt 1 C2B (D366E) 2019-08-26 2020-05-13 Bradberry, M.M.,Courtney, N.A.,Dominguez, M.J.,Lofquist, S.M.,Knox, A.T.,Sutton, R.B.,Chapman, E.R. Molecular Basis for Synaptotagmin-1-Associated Neurodevelopmental Disorder. Neuron 2020 107 52 0 6UIO 32601205 Crystal structure of mouse CRES (Cystatin-Related Epididymal Spermatogenic) 2019-10-01 2020-07-01 Hewetson, A.,Khan, N.H.,Dominguez, M.J.,Do, H.Q.,Kusko, R.E.,Borcik, C.G.,Rigden, D.J.,Keegan, R.M.,Sutton, R.B.,Latham, M.P.,Wylie, B.J.,Cornwall, G.A. Maturation of the functional mouse CRES amyloid from globular form. Proc.Natl.Acad.Sci.USA 2020 117 16363 16372 6U4L 32368901 cysteine dioxygenase variant - C93E 2019-08-26 2020-07-08 Forbes, D.L.,Meneely, K.M.,Chilton, A.S.,Lamb, A.L.,Ellis, H.R. The 3-His Metal Coordination Site Promotes the Coupling of Oxygen Activation to Cysteine Oxidation in Cysteine Dioxygenase. Biochemistry 2020 59 2022 2031 6U7V 33378677 xRRM structure of spPof8 2019-09-03 2020-09-09 Hu, X.,Kim, J.K.,Yu, C.,Jun, H.I.,Liu, J.,Sankaran, B.,Huang, L.,Qiao, F. Quality-Control Mechanism for Telomerase RNA Folding in the Cell. Cell Rep 2020 33 108568 108568 6VLB 33135674 Crystal structure of ligand-free UDP-GlcNAc 2-epimerase from Neisseria meningitidis 2020-01-23 2020-11-11 Hurlburt, N.K.,Guan, J.,Ong, H.,Yu, H.,Chen, X.,Fisher, A.J. Structural characterization of a nonhydrolyzing UDP-GlcNAc 2-epimerase from Neisseria meningitidis serogroup A. Acta Crystallogr.,Sect.F 2020 76 557 567 6VLC 33135674 Crystal structure of UDP-GlcNAc 2-epimerase from Neisseria meningitidis bound to UDP-GlcNAc 2020-01-23 2020-11-11 Hurlburt, N.K.,Guan, J.,Ong, H.,Yu, H.,Chen, X.,Fisher, A.J. Structural characterization of a nonhydrolyzing UDP-GlcNAc 2-epimerase from Neisseria meningitidis serogroup A. Acta Crystallogr.,Sect.F 2020 76 557 567 6LLC 33087132 Discovery of A Dual Inhibitor of NQO1 and GSTP1 for Treating Malignant Glioblastoma 2019-12-23 2020-11-25 Lei, K.,Gu, X.,Alvarado, A.G.,Du, Y.,Luo, S.,Ahn, E.H.,Kang, S.S.,Ji, B.,Liu, X.,Mao, H.,Fu, H.,Kornblum, H.I.,Jin, L.,Li, H.,Ye, K. Discovery of a dual inhibitor of NQO1 and GSTP1 for treating glioblastoma. J Hematol Oncol 2020 13 141 141 6V42 Crystal structure of the flavin oxygenase with cofactor bound involved in folate catabolism 2019-11-27 2020-12-02 Begley, T.P.,Adak, S.,Zhao, B.,Li, P. A novel flavoenzyme catalyzed Baeyer-Villiger type rearrangement in bacterial folic acid catabolic pathway To Be Published 0 0 0 0 7K4Y 33214289 Crystal structure of Kemp Eliminase HG3.17 at 343 K 2020-09-16 2020-12-02 Otten, R.,Padua, R.A.P.,Bunzel, H.A.,Nguyen, V.,Pitsawong, W.,Patterson, M.,Sui, S.,Perry, S.L.,Cohen, A.E.,Hilvert, D.,Kern, D. How directed evolution reshapes the energy landscape in an enzyme to boost catalysis. Science 2020 370 1442 1446 6XSX The structure of the catalytic module of the metalloprotease ZmpA from Clostridium perfringens 2020-07-16 2021-02-03 Pluvinage, B.,Ficko-Blean, E.,Noach, I.,Stuart, C.,Thompson, N.,McClure, H.,Buenbrazo, N.,Wakarchuck, W.,Boraston, A.B. Molecular insights into architecturally complex glycopeptidases Proc.Natl.Acad.Sci.USA 2021 0 0 0 7LP1 34284061 Structure of Nedd4L WW3 domain 2021-02-11 2021-07-28 Rheinemann, L.,Thompson, T.,Mercenne, G.,Paine, E.L.,Peterson, F.C.,Volkman, B.F.,Alam, S.L.,Alian, A.,Sundquist, W.I. Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release. J.Biol.Chem. 2021 297 100975 100975 7LP2 34284061 Structure of Nedd4L WW3 domain 2021-02-11 2021-07-28 Rheinemann, L.,Thompson, T.,Mercenne, G.,Paine, E.L.,Peterson, F.C.,Volkman, B.F.,Alam, S.L.,Alian, A.,Sundquist, W.I. Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release. J.Biol.Chem. 2021 297 100975 100975 7LP3 34284061 Structure of Nedd4L WW3 domain 2021-02-11 2021-07-28 Rheinemann, L.,Thompson, T.,Mercenne, G.,Paine, E.L.,Peterson, F.C.,Volkman, B.F.,Alam, S.L.,Alian, A.,Sundquist, W.I. Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release. J.Biol.Chem. 2021 297 100975 100975 7L4W 34328319 Crystal structure of human monoacylglycerol lipase in complex with compound 2d 2020-12-21 2021-08-11 Ikeda, S.,Sugiyama, H.,Tokuhara, H.,Murakami, M.,Nakamura, M.,Oguro, Y.,Aida, J.,Morishita, N.,Sogabe, S.,Dougan, D.R.,Gay, S.C.,Qin, L.,Arimura, N.,Takahashi, Y.,Sasaki, M.,Kamada, Y.,Aoyama, K.,Kimoto, K.,Kamata, M. Design and Synthesis of Novel Spiro Derivatives as Potent and Reversible Monoacylglycerol Lipase (MAGL) Inhibitors: Bioisosteric Transformation from 3-Oxo-3,4-dihydro-2 H -benzo[ b ][1,4]oxazin-6-yl Moiety. J.Med.Chem. 2021 64 11014 11044 7RCL 34491744 Crystal Structure of ADP-bound Galactokinase 2021-07-07 2021-09-29 Liu, L.,Tang, M.,Pragani, R.,Whitby, F.G.,Zhang, Y.Q.,Balakrishnan, B.,Fang, Y.,Karavadhi, S.,Tao, D.,LeClair, C.A.,Hall, M.D.,Marugan, J.J.,Boxer, M.,Shen, M.,Hill, C.P.,Lai, K.,Patnaik, S. Structure-Based Optimization of Small Molecule Human Galactokinase Inhibitors. J.Med.Chem. 2021 64 13551 13571 7RCM 34491744 Crystal Structure of ADP-bound Galactokinase 2021-07-07 2021-09-29 Liu, L.,Tang, M.,Pragani, R.,Whitby, F.G.,Zhang, Y.Q.,Balakrishnan, B.,Fang, Y.,Karavadhi, S.,Tao, D.,LeClair, C.A.,Hall, M.D.,Marugan, J.J.,Boxer, M.,Shen, M.,Hill, C.P.,Lai, K.,Patnaik, S. Structure-Based Optimization of Small Molecule Human Galactokinase Inhibitors. J.Med.Chem. 2021 64 13551 13571 7S49 34491744 Crystal Structure of Inhibitor-bound Galactokinase 2021-09-08 2021-09-29 Liu, L.,Tang, M.,Pragani, R.,Whitby, F.G.,Zhang, Y.Q.,Balakrishnan, B.,Fang, Y.,Karavadhi, S.,Tao, D.,LeClair, C.A.,Hall, M.D.,Marugan, J.J.,Boxer, M.,Shen, M.,Hill, C.P.,Lai, K.,Patnaik, S. Structure-Based Optimization of Small Molecule Human Galactokinase Inhibitors. J.Med.Chem. 2021 64 13551 13571 7S4C 34491744 Crystal Structure of Inhibitor-bound Galactokinase 2021-09-08 2021-09-29 Liu, L.,Tang, M.,Pragani, R.,Whitby, F.G.,Zhang, Y.Q.,Balakrishnan, B.,Fang, Y.,Karavadhi, S.,Tao, D.,LeClair, C.A.,Hall, M.D.,Marugan, J.J.,Boxer, M.,Shen, M.,Hill, C.P.,Lai, K.,Patnaik, S. Structure-Based Optimization of Small Molecule Human Galactokinase Inhibitors. J.Med.Chem. 2021 64 13551 13571 6X41 Crystal structure of inactive enzymatic binary toxin component from Clostridium difficile 2020-05-21 2021-12-15 Pozharski, E. Crystal structure of inactive enzymatic binary toxin component from Clostridium difficile To Be Published 0 0 0 0 7EZJ 35217090 Crystal structure of p73 DNA binding domain complex bound with 1 bp and 2 bp spacer DNA response elements. 2021-06-01 2022-04-13 Koley, T.,Roy Chowdhury, S.,Kushwaha, T.,Kumar, M.,Inampudi, K.K.,Kaur, P.,Singh, T.P.,Viadiu, H.,Ethayathulla, A.S. Deciphering the mechanism of p73 recognition of p53 response elements using the crystal structure of p73-DNA complexes and computational studies. Int.J.Biol.Macromol. 2022 206 40 50 7TYB 35513576 Salicylate Adenylate PchD from Pseudomonas aeruginosa containing salicyl-AMS 2022-02-11 2022-05-18 Shelton, C.L.,Meneely, K.M.,Ronnebaum, T.A.,Chilton, A.S.,Riley, A.P.,Prisinzano, T.E.,Lamb, A.L. Rational inhibitor design for Pseudomonas aeruginosa salicylate adenylation enzyme PchD. J.Biol.Inorg.Chem. 2022 27 541 551 7TUA Human Synaptotagmin-1 C2B Y312F without Ca2+ 2022-02-02 2023-03-22 Dominguez, M.J.,Karmakar, S.,Fuson, K.L.,Sutton, R.B. Human Synaptotagmin-1 C2B Y312F without Ca2+ To Be Published 0 0 0 0 7TX9 Human Synaptotagmin-1 C2B Y312F Ca2+ bound 2022-02-08 2023-03-29 Dominguez, M.J.,Karmakar, S.,Fuson, K.L.,Sutton, R.B. Human Synaptotagmin-1 C2B Y312F Ca2+ bound To Be Published 0 0 0 0 8A83 37418747 rsEGFP2 with a chlorinated chromophore in the fluorescent ON-state in a crystal dehydrated after illumination 2022-06-21 2023-07-19 Fadini, A.,Hutchison, C.D.M.,Morozov, D.,Chang, J.,Maghlaoui, K.,Perrett, S.,Luo, F.,Kho, J.C.X.,Romei, M.G.,Morgan, R.M.L.,Orr, C.M.,Cordon-Preciado, V.,Fujiwara, T.,Nuemket, N.,Tosha, T.,Tanaka, R.,Owada, S.,Tono, K.,Iwata, S.,Boxer, S.G.,Groenhof, G.,Nango, E.,van Thor, J.J. Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc. 2023 145 15796 15808