PDB_ID	STRUCTURE TITLE	DEPOSITION DATE	RELEASE DATE	AUTHORS	TITLE	JOURNAL	YEAR	VOLUME	FIRST PAGE	LAST PAGE
1DDZ	X-RAY STRUCTURE OF A BETA-CARBONIC ANHYDRASE FROM THE RED ALGA, PORPHYRIDIUM PURPUREUM R-1	1999-11-12	2000-03-08	Mitsuhashi, S.,Mizushima, T.,Yamashita, E.,Yamamoto, M.,Kumasaka, T.,Moriyama, H.,Ueki, T.,Miyachi, S.,Tsukihara, T.	X-ray structure of beta-carbonic anhydrase from the red alga, Porphyridium purpureum, reveals a novel catalytic site for CO(2) hydration.	J.Biol.Chem.	2000	275	5521	5526
1GCJ	N-TERMINAL FRAGMENT OF IMPORTIN-BETA	2000-07-31	2000-10-18	Lee, S.J.,Imamoto, N.,Sakai, H.,Nakagawa, A.,Kose, S.,Koike, M.,Yamamoto, M.,Kumasaka, T.,Yoneda, Y.,Tsukihara, T.	The adoption of a twisted structure of importin-beta is essential for the protein-protein interaction required for nuclear transport.	J.Mol.Biol.	2000	302	251	264
1EWK	CRYSTAL STRUCTURE OF METABOTROPIC GLUTAMATE RECEPTOR SUBTYPE 1 COMPLEXED WITH GLUTAMATE	2000-04-26	2000-12-18	Kunishima, N.,Shimada, Y.,Tsuji, Y.,Sato, T.,Yamamoto, M.,Kumasaka, T.,Nakanishi, S.,Jingami, H.,Morikawa, K.	Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor.	Nature	2000	407	971	977
1EE8	CRYSTAL STRUCTURE OF MUTM (FPG) PROTEIN FROM THERMUS THERMOPHILUS HB8	2000-01-31	2001-01-31	Sugahara, M.,Mikawa, T.,Kumasaka, T.,Yamamoto, M.,Kato, R.,Fukuyama, K.,Inoue, Y.,Kuramitsu, S.	Crystal structure of a repair enzyme of oxidatively damaged DNA, MutM (Fpg), from an extreme thermophile, Thermus thermophilus HB8.	EMBO J.	2000	19	3857	3869
1HJC	CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER	2001-01-11	2001-03-09	Tahirov, T.H.,Inoue-Bungo, T.,Morii, H.,Fujikawa, A.,Sasaki, M.,Kimura, K.,Shiina, M.,Sato, K.,Kumasaka, T.,Yamamoto, M.,Ishii, S.,Ogata, K.	Structural Analyses of DNA Recognition by the Aml1/Runx-1 Runt Domain and its Allosteric Control by Cbfbeta	Cell (Cambridge,Mass.)	2001	104	755	767
1IO4	CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN-CBFBETA CORE DOMAIN HETERODIMER AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER	2001-01-10	2001-03-12	Tahirov, T.H.,Inoue-Bungo, T.,Morii, H.,Fujikawa, A.,Sasaki, M.,Kimura, K.,Shiina, M.,Sato, K.,Kumasaka, T.,Yamamoto, M.,Ishii, S.,Ogata, K.	Structural analyses of DNA recognition by the AML1/Runx-1 Runt domain and its allosteric control by CBFbeta.	Cell	2001	104	755	767
1G12	ZINC PEPTIDASE FROM GRIFOLA FRONDOSA	2000-10-10	2001-03-14	Hori, T.,Kumasaka, T.,Yamamoto, M.,Nonaka, N.,Tanaka, N.,Hashimoto, Y.,Ueki, U.,Takio, K.	Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms.	Acta Crystallogr.,Sect.D	2001	57	361	368
1GE6	ZINC PEPTIDASE FROM GRIFOLA FRONDOSA	2000-10-11	2001-03-14	Hori, T.,Kumasaka, T.,Yamamoto, M.,Nonaka, N.,Tanaka, N.,Hashimoto, Y.,Ueki, U.,Takio, K.	Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms.	Acta Crystallogr.,Sect.D	2001	57	361	368
1GE7	ZINC PEPTIDASE FROM GRIFOLA FRONDOSA	2000-10-11	2001-03-14	Hori, T.,Kumasaka, T.,Yamamoto, M.,Nonaka, N.,Tanaka, N.,Hashimoto, Y.,Ueki, U.,Takio, K.	Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms.	Acta Crystallogr.,Sect.D	2001	57	361	368
1ERZ	CRYSTAL STRUCTURE OF N-CARBAMYL-D-AMINO ACID AMIDOHYDROLASE WITH A NOVEL CATALYTIC FRAMEWORK COMMON TO AMIDOHYDROLASES	2000-04-06	2001-04-06	Nakai, T.,Hasegawa, T.,Yamashita, E.,Yamamoto, M.,Kumasaka, T.,Ueki, T.,Nanba, H.,Ikenaka, Y.,Takahashi, S.,Sato, M.,Tsukihara, T.	Crystal structure of N-carbamyl-D-amino acid amidohydrolase with a novel catalytic framework common to amidohydrolases.	Structure Fold.Des.	2000	8	729	737
1H88	CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX1	2001-01-29	2002-01-28	Tahirov, T.H.,Sato, K.,Ichikawa-Iwata, E.,Sasaki, M.,Inoue-Bungo, T.,Shiina, M.,Kimura, K.,Takata, S.,Fujikawa, A.,Morii, H.,Kumasaka, T.,Yamamoto, M.,Ishii, S.,Ogata, K.	Mechanism of C-Myb-C/Ebpbeta Cooperation from Separated Sites on a Promoter	Cell (Cambridge,Mass.)	2002	108	57	70
1H89	CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX2	2001-01-30	2002-01-28	Tahirov, T.H.,Sato, K.,Ichikawa-Iwata, E.,Sasaki, M.,Inoue-Bungo, T.,Shiina, M.,Kimura, K.,Takata, S.,Fujikawa, A.,Morii, H.,Kumasaka, T.,Yamamoto, M.,Ishii, S.,Ogata, K.	Mechanism of C-Myb-C/Ebpbeta Cooperation from Separated Sites on a Promoter	Cell (Cambridge,Mass.)	2002	108	57	70
1H8A	CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX3	2001-01-31	2002-01-28	Tahirov, T.H.,Sato, K.,Ichikawa-Iwata, E.,Sasaki, M.,Inoue-Bungo, T.,Shiina, M.,Kimura, K.,Takata, S.,Fujikawa, A.,Morii, H.,Kumasaka, T.,Yamamoto, M.,Ishii, S.,Ogata, K.	Mechanism of C-Myb-C/Ebpbeta Cooperation from Separated Sites on a Promoter	Cell (Cambridge,Mass.)	2002	108	57	70
1GC0	CRYSTAL STRUCTURE OF THE PYRIDOXAL-5'-PHOSPHATE DEPENDENT L-METHIONINE GAMMA-LYASE FROM PSEUDOMONAS PUTIDA	2000-07-06	2002-05-08	Motoshima, H.,Inagaki, K.,Kumasaka, T.,Furuichi, M.,Inoue, H.,Tamura, T.,Esaki, N.,Soda, K.,Tanaka, N.,Yamamoto, M.,Tanaka, H.	Crystal structure of the pyridoxal 5'-phosphate dependent L-methionine gamma-lyase from Pseudomonas putida	J.BIOCHEM.(TOKYO)	2000	128	349	354
1GC2	CRYSTAL STRUCTURE OF THE PYRIDOXAL-5'-PHOSPHATE DEPENDENT L-METHIONINE GAMMA-LYASE FROM PSEUDOMONAS PUTIDA	2000-07-06	2002-05-08	Motoshima, H.,Inagaki, K.,Kumasaka, T.,Furuichi, M.,Inoue, H.,Tamura, T.,Esaki, N.,Soda, K.,Tanaka, N.,Yamamoto, M.,Tanaka, H.	Crystal structure of the pyridoxal 5'-phosphate dependent L-methionine gamma-lyase from Pseudomonas putida	J.BIOCHEM.(TOKYO)	2000	128	349	354
1GC2	CRYSTAL STRUCTURE OF THE PYRIDOXAL-5'-PHOSPHATE DEPENDENT L-METHIONINE GAMMA-LYASE FROM PSEUDOMONAS PUTIDA	2000-07-06	2002-05-08	Motoshima, H.,Inagaki, K.,Kumasaka, T.,Furuichi, M.,Inoue, H.,Tamura, T.,Esaki, N.,Soda, K.,Tanaka, N.,Yamamoto, M.,Tanaka, H.	Crystal structure of the pyridoxal 5'-phosphate dependent L-methionine gamma-lyase from Pseudomonas putida	J.BIOCHEM.(TOKYO)	2000	128	349	354
1GC2	CRYSTAL STRUCTURE OF THE PYRIDOXAL-5'-PHOSPHATE DEPENDENT L-METHIONINE GAMMA-LYASE FROM PSEUDOMONAS PUTIDA	2000-07-06	2002-05-08	Motoshima, H.,Inagaki, K.,Kumasaka, T.,Furuichi, M.,Inoue, H.,Tamura, T.,Esaki, N.,Soda, K.,Tanaka, N.,Yamamoto, M.,Tanaka, H.	Crystal structure of the pyridoxal 5'-phosphate dependent L-methionine gamma-lyase from Pseudomonas putida	J.BIOCHEM.(TOKYO)	2000	128	349	354
1IOO	CRYSTAL STRUCTURE OF NICOTIANA ALATA GEMETOPHYTIC SELF-INCOMPATIBILITY ASSOCIATED SF11-RNASE	2001-03-26	2002-05-08	Ida, K.,Norioka, S.,Yamamoto, M.,Kumasaka, T.,Yamashita, E.,Newbigin, E.,Clarke, A.E.,Sakiyama, F.,Sato, M.	The 1.55 A resolution structure of Nicotiana alata S(F11)-RNase associated with gametophytic self-incompatibility.	J.Mol.Biol.	2001	314	103	112
1I2H	CRYSTAL STRUCTURE ANALYSIS OF PSD-ZIP45(HOMER1C/VESL-1L)CONSERVED HOMER 1 DOMAIN	2001-02-09	2002-05-29	Irie, K.,Nakatsu, T.,Mitsuoka, K.,Miyazawa, A.,Sobue, K.,Hiroaki, Y.,Doi, T.,Fujiyoshi, Y.,Kato, H.	Crystal Structure of the Homer 1 Family Conserved Region Reveals the Interaction Between the EVH1 Domain and  Own Proline-rich Motif	J.Mol.Biol.	2002	318	1117	1126
1H38	STRUCTURE OF A T7 RNA POLYMERASE ELONGATION COMPLEX AT 2.9A RESOLUTION	2002-08-24	2002-11-20	Tahirov, T.H.,Temiakov, D.,Anikin, M.,Patlan, V.,McAllister, W.T.,Vassylyev, D.G.,Yokoyama, S.	Structure of a T7 RNA polymerase elongation complex at 2.9 A resolution.	Nature	2002	420	43	50
1N75	Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with ATP.	2002-11-12	2003-02-25	Sekine, S.,Nureki, O.,Dubois, D.Y.,Bernier, S.,Chenevert, R.,Lapointe, J.,Vassylyev, D.G.,Yokoyama, S.	ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding	EMBO J.	2003	22	676	688
1ODE	CRYSTAL ANALYSIS OF CHORISMATE MUTASE FROM THERMUS THERMOPHILUS.	2003-02-18	2003-02-27	Inagaki, E.,Kuramitsu, S.,Yokoyama, S.,Miyano, M.,Tahirov, T.H.	The Crystal Structure of Chorismate Mutase from Thermus Thermophilus	To be Published	0	0	0	0
1J3N	Crystal Structure of 3-oxoacyl-(acyl-carrier protein) Synthase II from Thermus thermophilus HB8	2003-02-10	2003-03-11	Bagautdinov, B.,Ukita, Y.,Miyano, M.,Kunishima, N.	Structure of 3-oxoacyl-(acyl-carrier protein) synthase II from Thermus thermophilus HB8.	Acta Crystallogr.,Sect.F	2008	64	358	366
1GU4	CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A HIGH AFFINITY DNA FRAGMENT	2002-01-23	2003-06-26	Tahirov, T.H.,Inoue-Bungo, T.,Sato, K.,Sasaki, M.,Ogata, K.	Structural Basis for Flexible Base Recognition by C/Ebpbeta	To be Published	0	0	0	0
1GU5	CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE MIM-1 PROMOTER	2002-01-24	2003-06-26	Tahirov, T.H.,Inoue-Bungo, T.,Sato, K.,Sasaki, M.,Ogata, K.	Structural Basis for Flexible Base Recognition by C/Ebpbeta	To be Published	0	0	0	0
1IUK	The structure of native ID.343 from Thermus thermophilus	2002-03-05	2003-07-15	Wada, T.,Shirouzu, M.,Terada, T.,Ishizuka, Y.,Matsuda, T.,Kigawa, T.,Kuramitsu, S.,Park, S.Y.,Tame, J.R.,Yokoyama, S.	Structure of a conserved CoA-binding protein synthesized by a cell-free system.	Acta Crystallogr.,Sect.D	2003	59	1213	1218
1UI0	Crystal Structure Of Uracil-DNA Glycosylase From Thermus Thermophilus HB8	2003-07-14	2003-10-14	Hoseki, J.,Okamoto, A.,Masui, R.,Shibata, T.,Inoue, Y.,Yokoyama, S.,Kuramitsu, S.	Crystal Structure of a Family 4 Uracil-DNA Glycosylase from Thermus thermophilus HB8	J.Mol.Biol.	2003	333	515	526
1UI1	Crystal Structure Of Uracil-DNA Glycosylase From Thermus Thermophilus HB8	2003-07-14	2003-10-14	Hoseki, J.,Okamoto, A.,Masui, R.,Shibata, T.,Inoue, Y.,Yokoyama, S.,Kuramitsu, S.	Crystal Structure of a Family 4 Uracil-DNA Glycosylase from Thermus thermophilus HB8	J.Mol.Biol.	2003	333	515	526
1UHN	The crystal structure of the calcium binding protein AtCBL2 from Arabidopsis thaliana	2003-07-07	2003-11-04	Nagae, M.,Nozawa, A.,Koizumi, N.,Sano, H.,Hashimoto, H.,Sato, M.,Shimizu, T.	The Crystal Structure of the Novel Calcium-binding Protein AtCBL2 from Arabidopsis thaliana	J.Biol.Chem.	2003	278	42240	42246
1Q3Q	Crystal structure of the chaperonin from Thermococcus strain KS-1 (two-point mutant complexed with AMP-PNP)	2003-07-31	2004-01-27	Shomura, Y.,Yoshida, T.,Iizuka, R.,Maruyama, T.,Yohda, M.,Miki, K.	Crystal Structures of the Group II Chaperonin from Thermococcus strain KS-1: Steric Hindrance by the Substituted Amino Acid, and Inter-subunit Rearrangement between Two Crystal Forms.	J.Mol.Biol.	2004	335	1265	1278
1J1T	Alginate lyase from Alteromonas sp.272	2002-12-14	2004-02-03	Motoshima, H.,Iwatomo, Y.,Watanabe, K.,Oda, T.,Muramatsu, T.	Crystal Strucutre of Alginate Lyase from Alteromonas sp.272	To be published	0	0	0	0
1GVJ	ETS-1 DNA BINDING AND AUTOINHIBITORY DOMAINS	2002-02-14	2004-02-06	Tahirov, T.H.,Inoue-Bungo, T.,Ogata, K.	Crystal Structure of C-Ets-1 DNA-Binding and Autoinhibitory Domains	To be Published	0	0	0	0
1UMD	branched-chain 2-oxo acid dehydrogenase (E1) from Thermus thermophilus HB8 with 4-methyl-2-oxopentanoate as an intermediate	2003-09-25	2004-03-30	Nakai, T.,Nakagawa, N.,Maoka, N.,Masui, R.,Kuramitsu, S.,Kamiya, N.	Ligand-induced Conformational Changes and a Reaction Intermediate in Branched-chain 2-Oxo Acid Dehydrogenase (E1) from Thermus thermophilus HB8, as Revealed by X-ray Crystallography	J.Mol.Biol.	2004	337	1011	1033
1V9M	Crystal structure of the C subunit of V-type ATPase from Thermus thermophilus	2004-01-26	2004-05-04	Numoto, N.,Kita, A.,Miki, K.	Structure of the C subunit of V-type ATPase from Thermus thermophilus at 1.85 A resolution.	Acta Crystallogr.,Sect.D	2004	60	810	815
1UJ4	Crystal structure of Thermus thermophilus ribose-5-phosphate isomerase	2003-07-26	2004-07-13	Hamada, K.,Ago, H.,Sugahara, M.,Nodake, Y.,Kuramitsu, S.,Miyano, M.	Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi)	J.Biol.Chem.	2003	278	49183	49190
1UJ5	Crystal structure of Thermus thermophilus ribose-5-phosphate isomerase complexed with ribose-5-phosphate	2003-07-26	2004-07-13	Hamada, K.,Ago, H.,Sugahara, M.,Nodake, Y.,Kuramitsu, S.,Miyano, M.	Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi)	J.Biol.Chem.	2003	278	49183	49190
1UJ6	Crystal structure of Thermus thermophilus ribose-5-phosphate isomerase complexed with arabinose-5-phosphate	2003-07-26	2004-07-13	Hamada, K.,Ago, H.,Sugahara, M.,Nodake, Y.,Kuramitsu, S.,Miyano, M.	Oxyanion hole-stabilized stereospecific isomerization in ribose-5-phosphate isomerase (Rpi)	J.Biol.Chem.	2003	278	49183	49190
1V3U	Crystal structure of leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase in apo form	2003-11-05	2004-07-13	Hori, T.,Yokomizo, T.,Ago, H.,Sugahara, M.,Ueno, G.,Yamamoto, M.,Kumasaka, T.,Shimizu, T.,Miyano, M.	Structural basis of leukotriene B4 12-hydroxydehydrogenase/15-Oxo-prostaglandin 13-reductase catalytic mechanism and a possible Src homology 3 domain binding loop	J.Biol.Chem.	2004	279	22615	22623
1V3V	Crystal structure of leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase complexed with NADP and 15-oxo-PGE2	2003-11-06	2004-07-13	Hori, T.,Yokomizo, T.,Ago, H.,Sugahara, M.,Ueno, G.,Yamamoto, M.,Kumasaka, T.,Shimizu, T.,Miyano, M.	Structural basis of leukotriene B4 12-hydroxydehydrogenase/15-Oxo-prostaglandin 13-reductase catalytic mechanism and a possible Src homology 3 domain binding loop	J.Biol.Chem.	2004	279	22615	22623
1V25	Crystal structure of tt0168 from Thermus thermophilus HB8	2003-10-07	2004-07-27	Hisanaga, Y.,Ago, H.,Nakagawa, N.,Hamada, K.,Ida, K.,Yamamoto, M.,Hori, T.,Arii, Y.,Sugahara, M.,Kuramitsu, S.,Yokoyama, S.,Miyano, M.	Structural Basis of the Substrate-specific Two-step Catalysis of Long Chain Fatty Acyl-CoA Synthetase Dimer	J.Biol.Chem.	2004	279	31717	31726
1V26	Crystal structure of tt0168 from Thermus thermophilus HB8	2003-10-07	2004-07-27	Hisanaga, Y.,Ago, H.,Nakagawa, N.,Hamada, K.,Ida, K.,Yamamoto, M.,Hori, T.,Arii, Y.,Sugahara, M.,Kuramitsu, S.,Yokoyama, S.,Miyano, M.	Structural Basis of the Substrate-specific Two-step Catalysis of Long Chain Fatty Acyl-CoA Synthetase Dimer	J.Biol.Chem.	2004	279	31717	31726
1VDH	Structure-based functional identification of a novel heme-binding protein from thermus thermophilus HB8	2004-03-22	2004-09-22	Ebihara, A.,Okamoto, A.,Kousumi, Y.,Yamamoto, H.,Masui, R.,Ueyama, N.,Yokoyama, S.,Kuramitsu, S.	Structure-based functional identification of a novel heme-binding protein from Thermus thermophilus HB8.	J.Struct.Funct.Genomics	2005	6	21	32
1VDH	Structure-based functional identification of a novel heme-binding protein from thermus thermophilus HB8	2004-03-22	2004-09-22	Ebihara, A.,Okamoto, A.,Kousumi, Y.,Yamamoto, H.,Masui, R.,Ueyama, N.,Yokoyama, S.,Kuramitsu, S.	Structure-based functional identification of a novel heme-binding protein from Thermus thermophilus HB8.	J.Struct.Funct.Genomics	2005	6	21	32
1ULR	Crystal structure of tt0497 from Thermus thermophilus HB8	2003-09-16	2004-11-02	Ago, H.,Hamada, K.,Sugahara, M.,Kuroishi, C.,Kuramitsu, S.,Yokoyama, S.,Miyano, M.	Crystal structure of tt0497 from Thermus thermophilus HB8	To be Published	0	0	0	0
1ULS	Crystal structure of tt0140 from Thermus thermophilus HB8	2003-09-16	2004-11-02	Hisanaga, Y.,Ago, H.,Hamada, K.,Sugahara, M.,Nodake, Y.,Kuramitsu, S.,Yokoyama, S.,Miyano, M.	Crystal structure of tt0140 from Thermus thermophilus HB8	To be Published	0	0	0	0
1WVP	Structure of chemically modified myoglobin with distal N-tetrazolyl-histidine E7(64)	2004-12-23	2005-01-18	Kamiya, N.,Shiro, Y.,Iwata, T.,Iizuka, T.,Iwasaki, H.	Heme environmental structure of a novel artificial myoglobin with a closed heme pocket: site-specific chemical modification producing distal N-tetrazolylhistidine E7 by cyanogen bromide and azide ion	J.Am.Chem.Soc.	1991	113	1826	1829
1WN0	Crystal Structure of Histidine-containing Phosphotransfer Protein, ZmHP2, from maize	2004-07-24	2005-01-25	Sugawara, H.,Kawano, Y.,Hatakeyama, T.,Yamaya, T.,Kamiya, N.,Sakakibara, H.	Crystal structure of the histidine-containing phosphotransfer protein ZmHP2 from maize	Protein Sci.	2005	14	202	208
1WN0	Crystal Structure of Histidine-containing Phosphotransfer Protein, ZmHP2, from maize	2004-07-24	2005-01-25	Sugawara, H.,Kawano, Y.,Hatakeyama, T.,Yamaya, T.,Kamiya, N.,Sakakibara, H.	Crystal structure of the histidine-containing phosphotransfer protein ZmHP2 from maize	Protein Sci.	2005	14	202	208
1WYT	Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in apo form	2005-02-17	2005-04-05	Nakai, T.,Nakagawa, N.,Maoka, N.,Masui, R.,Kuramitsu, S.,Kamiya, N.	Structure of P-protein of the glycine cleavage system: implications for nonketotic hyperglycinemia	Embo J.	2005	24	1523	1536
1WYU	Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in holo form	2005-02-17	2005-04-05	Nakai, T.,Nakagawa, N.,Maoka, N.,Masui, R.,Kuramitsu, S.,Kamiya, N.	Structure of P-protein of the glycine cleavage system: implications for nonketotic hyperglycinemia	Embo J.	2005	24	1523	1536
1VCD	Crystal Structure of a T.thermophilus HB8 Ap6A hydrolase Ndx1	2004-03-05	2005-04-26	Iwai, T.,Nakagawa, N.,Kuramitsu, S.,Masui, R.	Crystal Structure of Nudix Protein Ndx1 from Thermus thermophilus HB8 in binary complex with diadenosine hexaphosphate	To be Published	0	0	0	0
1WCW	Crystal Structure of Uroporphyrinogen III Synthase from an Extremely Thermophilic Bacterium Thermus thermophilus HB8 (Wild type, Native, Form-1 crystal)	2004-05-06	2005-05-06	Mizohata, E.,Matsuura, T.,Sakai, H.,Murayama, K.,Terada, T.,Shirouzu, M.,Kuramitsu, S.,Yokoyama, S.	Crystal Structure of Uroporphyrinogen III Synthase from Thermus thermophilus HB8	To be Published	0	0	0	0
1WUQ	Structure of GTP cyclohydrolase I Complexed with 8-oxo-GTP	2004-12-08	2005-07-19	Tanaka, Y.,Nakagawa, N.,Kuramitsu, S.,Yokoyama, S.,Masui, R.	Novel reaction mechanism of GTP cyclohydrolase I. High-resolution X-ray crystallography of Thermus thermophilus HB8 enzyme complexed with a transition state analogue, the 8-oxoguanine derivative	J.Biochem.(Tokyo)	2005	138	263	275
1WUR	Structure of GTP cyclohydrolase I Complexed with 8-oxo-dGTP	2004-12-08	2005-07-19	Tanaka, Y.,Nakagawa, N.,Kuramitsu, S.,Yokoyama, S.,Masui, R.	Novel reaction mechanism of GTP cyclohydrolase I. High-resolution X-ray crystallography of Thermus thermophilus HB8 enzyme complexed with a transition state analogue, the 8-oxoguanine derivative	J.Biochem.(Tokyo)	2005	138	263	275
1WKJ	Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8	2004-05-31	2005-08-23	Takeishi, S.,Nakagawa, N.,Masui, R.,Kuramitsu, S.	Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8	To be Published	0	0	0	0
1WN5	Crystal Structure of Blasticidin S Deaminase (BSD) Complexed with Cacodylic Acid	2004-07-27	2005-10-25	Kumasaka, T.,Yamamoto, M.,Furuichi, M.,Nakasako, M.,Teh, A.H.,Kimura, M.,Yamaguchi, I.,Ueki, T.	Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc	J.Biol.Chem.	2007	282	37103	37111
1WN6	Crystal Structure of Blasticidin S Deaminase (BSD) Complexed with Tetrahedral Intermediate of Blasticidin S	2004-07-27	2005-10-25	Kumasaka, T.,Yamamoto, M.,Furuichi, M.,Nakasako, M.,Teh, A.H.,Kimura, M.,Yamaguchi, I.,Ueki, T.	Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc	J.Biol.Chem.	2007	282	37103	37111
2D0Q	Complex of Fe-type NHase with Cyclohexyl isocyanide, photo-activated for 1hr at 277K	2005-08-05	2006-02-05	Nojiri, M.,Kawano, Y.,Hashimoto, K.,Kamiya, N.	X-ray snap shots of Inhibitor Binding Process in Photo-reactive Nitrile Hydratase	To be Published	0	0	0	0
2D1R	Crystal structure of the thermostable Japanese firefly Luciferase complexed with OXYLUCIFERIN and AMP	2005-08-31	2006-03-21	Nakatsu, T.,Ichiyama, S.,Hiratake, J.,Saldanha, A.,Kobashi, N.,Sakata, K.,Kato, H.	Structural basis for the spectral difference in luciferase bioluminescence.	Nature	2006	440	372	376
2D1S	Crystal structure of the thermostable Japanese Firefly Luciferase complexed with High-energy intermediate analogue	2005-08-31	2006-03-21	Nakatsu, T.,Ichiyama, S.,Hiratake, J.,Saldanha, A.,Kobashi, N.,Sakata, K.,Kato, H.	Structural basis for the spectral difference in luciferase bioluminescence.	Nature	2006	440	372	376
2DDR	Crystal structure of sphingomyelinase from Bacillus cereus with calcium ion	2006-02-02	2006-05-02	Ago, H.,Oda, M.,Takahashi, M.,Tsuge, H.,Ochi, S.,Katunuma, N.,Miyano, M.,Sakurai, J.	Structural Basis of the Sphingomyelin Phosphodiesterase Activity in Neutral Sphingomyelinase from Bacillus cereus.	J.Biol.Chem.	2006	281	16157	16167
2DN1	1.25A resolution crystal structure of human hemoglobin in the oxy form	2006-04-25	2006-05-09	Park, S.-Y.,Yokoyama, T.,Shibayama, N.,Shiro, Y.,Tame, J.R.	1.25 a resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms.	J.Mol.Biol.	2006	360	690	701
2CZT	lipocalin-type prostaglandin D synthase	2005-07-17	2006-10-03	Kumasaka, T.,Irikura, D.,Ago, H.,Aritake, K.,Yamamoto, M.,Inoue, T.,Miyano, M.,Urade, Y.,Hayaishi, O.	Structural Basis of Multi-functional Lipocalin-type Prostaglandin D Synthase	To be Published	0	0	0	0
2CZU	lipocalin-type prostaglandin D synthase	2005-07-17	2006-10-03	Kumasaka, T.,Irikura, D.,Ago, H.,Aritake, K.,Yamamoto, M.,Inoue, T.,Miyano, M.,Urade, Y.,Hayaishi, O.	Structural Basis of Multi-functional Lipocalin-type Prostaglandin D Synthase	To be Published	0	0	0	0
2D3Y	Crystal structure of uracil-DNA glycosylase from Thermus Thermophilus HB8	2005-10-04	2006-10-17	Kosaka, H.,Nakagawa, N.,Masui, R.,Kuramitsu, S.	Crystal structure of uracil-DNA glycosylase from Thermus Thermophilus HB8	To be Published	0	0	0	0
2DM6	Crystal structure of anti-configuration of indomethacin and leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase complex	2006-04-20	2006-11-28	Hori, T.,Ishijima, J.,Yokomizo, T.,Ago, H.,Shimizu, T.,Miyano, M.	Crystal structure of anti-configuration of indomethacin and leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase complex reveals the structural basis of broad spectrum indomethacin efficacy	J.Biochem.(Tokyo)	2006	140	457	466
2IPC	Crystal structure of the translocation ATPase SecA from Thermus thermophilus reveals a parallel, head-to-head dimer	2006-10-12	2006-11-28	Vassylyev, D.G.,Mori, H.,Vassylyeva, M.N.,Tsukazaki, T.,Kimura, Y.,Tahirov, T.H.,Ito, K.	Crystal Structure of the Translocation ATPase SecA from Thermus thermophilus Reveals a Parallel, Head-to-Head Dimer.	J.Mol.Biol.	2006	364	248	258
2DQB	Crystal structure of dNTP triphosphohydrolase from Thermus thermophilus HB8, which is homologous to dGTP triphosphohydrolase	2006-05-25	2007-01-23	Kondo, N.,Nakagawa, N.,Ebihara, A.,Chen, L.,Liu, Z.-J.,Wang, B.-C.,Yokoyama, S.,Kuramitsu, S.,Masui, R.	Structure of dNTP-inducible dNTP triphosphohydrolase: insight into broad specificity for dNTPs and triphosphohydrolase-type hydrolysis	ACTA CRYSTALLOGR.,SECT.D	2007	63	230	239
2YW9	Crystal structure of TT0143 from Thermus thermophilus HB8	2007-04-20	2007-05-15	Ago, H.,Hamada, K.,Ida, K.,Kanda, H.,Sugahara, M.,Yamamoto, M.,Nodake, Y.,Kuramitsu, S.,Yokoyama, S.,Miyano, M.	Crystal structure of TT0143 from Thermus thermophilus HB8	To be Published	0	0	0	0
2YQH	Crystal structure of uridine-diphospho-N-acetylglucosamine pyrophosphorylase from Candida albicans, in the substrate-binding form	2007-03-30	2007-05-22	Maruyama, D.,Nishitani, Y.,Nonaka, T.,Kita, A.,Fukami, T.A.,Mio, T.,Yamada-Okabe, H.,Yamada-Okabe, T.,Miki, K.	Crystal Structure of Uridine-diphospho-N-acetylglucosamine Pyrophosphorylase from Candida albicans and Catalytic Reaction Mechanism	J.Biol.Chem.	2007	282	17221	17230
2YQJ	Crystal Structure of uridine-diphospho-N-acetylglucosamine pyrophosphorylase from Candida albicans, in the reaction-completed form	2007-03-30	2007-05-22	Maruyama, D.,Nishitani, Y.,Nonaka, T.,Kita, A.,Fukami, T.A.,Mio, T.,Yamada-Okabe, H.,Yamada-Okabe, T.,Miki, K.	Crystal Structure of Uridine-diphospho-N-acetylglucosamine Pyrophosphorylase from Candida albicans and Catalytic Reaction Mechanism	J.Biol.Chem.	2007	282	17221	17230
2YQS	Crystal structure of uridine-diphospho-N-acetylglucosamine pyrophosphorylase from Candida albicans, in the product-binding form	2007-03-30	2007-05-22	Maruyama, D.,Nishitani, Y.,Nonaka, T.,Kita, A.,Fukami, T.A.,Mio, T.,Yamada-Okabe, H.,Yamada-Okabe, T.,Miki, K.	Crystal Structure of Uridine-diphospho-N-acetylglucosamine Pyrophosphorylase from Candida albicans and Catalytic Reaction Mechanism	J.Biol.Chem.	2007	282	17221	17230
2DQ4	Crystal structure of threonine 3-dehydrogenase	2006-05-19	2007-06-12	Omi, R.,Yao, T.,Goto, M.,Miyahara, I.,Hirotsu, K.	Crystal structure of threonine 3-dehydrogenase	To be Published	0	0	0	0
2EKU	Crystal structure of myoglobin reconstituted with 7-methyl-7-depropionatehemin	2007-03-25	2007-08-14	Harada, K.,Makino, M.,Sugimoto, H.,Hirota, S.,Matsuo, T.,Shiro, Y.,Hisaeda, Y.,Hayashi, T.	Structure and ligand binding properties of myoglobins reconstituted with monodepropionated heme: functional role of each heme propionate side chain	Biochemistry	2007	46	9406	9416
2DXB	Recombinant thiocyanate hydrolase comprising partially-modified cobalt centers	2006-08-25	2007-08-28	Arakawa, T.,Kawano, Y.,Katayama, Y.,Yohda, M.,Odaka, M.	Structural basis for the autocatalytic oxidation process of the unique cobalt center	To be Published	0	0	0	0
2E6E	Crystal structure of the stationary phase survival protein SurE from Thermus thermophilus HB8	2006-12-26	2007-08-28	Iwasaki, W.,Miki, K.	Crystal Structure of the Stationary Phase Survival Protein SurE with Metal Ion and AMP	J.Mol.Biol.	2007	371	123	136
2EGU	Crystal structure of O-acetylserine sulfhydrase from Geobacillus kaustophilus HTA426	2007-03-02	2007-09-04	Rehse, P.H.,Yokoyama, S.	Crystal structure of O-acetylserine sulfhydrase from Geobacillus kaustophilus HTA426	To be Published	0	0	0	0
2YYK	Crystal structure of the mutant of HpaB (T198I, A276G, and R466H)	2007-04-30	2007-09-04	Kim, S.-H.,Hisano, T.,Takeda, K.,Iwasaki, W.,Ebihara, A.,Miki, K.	Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8	J.Biol.Chem.	2007	282	33107	33117
2YYK	Crystal structure of the mutant of HpaB (T198I, A276G, and R466H)	2007-04-30	2007-09-04	Kim, S.-H.,Hisano, T.,Takeda, K.,Iwasaki, W.,Ebihara, A.,Miki, K.	Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8	J.Biol.Chem.	2007	282	33107	33117
2YYL	Crystal structure of the mutant of HpaB (T198I, A276G, and R466H) complexed with FAD	2007-04-30	2007-09-04	Kim, S.-H.,Hisano, T.,Takeda, K.,Iwasaki, W.,Ebihara, A.,Miki, K.	Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8	J.Biol.Chem.	2007	282	33107	33117
2YYM	Crystal structure of the mutant of HpaB (T198I, A276G, and R466H) complexed with FAD and 4-hydroxyphenylacetate	2007-04-30	2007-09-04	Kim, S.-H.,Hisano, T.,Takeda, K.,Iwasaki, W.,Ebihara, A.,Miki, K.	Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8	J.Biol.Chem.	2007	282	33107	33117
2EMQ	Hypothetical Conserved Protein (GK1048) from Geobacillus Kaustophilus	2007-03-28	2007-10-02	Rehse, P.H.,Yokoyama, S.	Hypothetical Conserved Protein (GK1048) from Geobacillus Kaustophilus	To be Published	0	0	0	0
2YV2	Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1	2007-04-06	2007-10-09	Niwa, H.,Kuramitsu, S.,Yokoyama, S.	Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1	To be Published	0	0	0	0
2Z3G	Crystal structure of blasticidin S deaminase (BSD)	2007-06-04	2007-10-23	Kumasaka, T.,Yamamoto, M.,Furuichi, M.,Nakasako, M.,Teh, A.H.,Kimura, M.,Yamaguchi, I.,Ueki, T.	Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc	J.Biol.Chem.	2007	282	37103	37111
2Z3H	Crystal structure of blasticidin S deaminase (BSD) complexed with deaminohydroxy blasticidin S	2007-06-04	2007-10-23	Kumasaka, T.,Yamamoto, M.,Furuichi, M.,Nakasako, M.,Teh, A.H.,Kimura, M.,Yamaguchi, I.,Ueki, T.	Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc	J.Biol.Chem.	2007	282	37103	37111
2Z3I	Crystal structure of blasticidin S deaminase (BSD) mutant E56Q complexed with substrate	2007-06-04	2007-10-23	Kumasaka, T.,Yamamoto, M.,Furuichi, M.,Nakasako, M.,Teh, A.H.,Kimura, M.,Yamaguchi, I.,Ueki, T.	Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc	J.Biol.Chem.	2007	282	37103	37111
2Z0J	Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8	2007-05-07	2007-11-13	Nakagawa, N.,Kukimoto-Niino, M.,Yokoyama, S.,Kuramitsu, S.	Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8	To be Published	0	0	0	0
2Z1A	Crystal structure of 5'-nucleotidase precursor from Thermus thermophilus HB8	2007-05-08	2007-11-13	Nakakaga, N.,Kishishita, S.,Yokoyama, S.,Kuramitsu, S.	Crystal structure of 5'-nucleotidase precursor from Thermus thermophilus HB8	To be Published	0	0	0	0
2ECR	Crystal structure of the ligand-free form of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase	2007-02-13	2008-01-15	Kim, S.H.,Hisano, T.,Iwasaki, W.,Ebihara, A.,Miki, K.	Crystal structure of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8: Structural basis for the flavin affinity	Proteins	2008	70	718	730
2ECU	Crystal structure of flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase	2007-02-14	2008-01-15	Kim, S.H.,Hisano, T.,Iwasaki, W.,Ebihara, A.,Miki, K.	Crystal structure of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8: Structural basis for the flavin affinity	Proteins	2008	70	718	730
2ED4	Crystal structure of flavin reductase HpaC complexed with FAD and NAD	2007-02-14	2008-01-15	Kim, S.H.,Hisano, T.,Iwasaki, W.,Ebihara, A.,Miki, K.	Crystal structure of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8: Structural basis for the flavin affinity	Proteins	2008	70	718	730
2EFN	Crystal Structure of Ser 32 to Ala of ST1022 from Sulfolobus tokodaii 7	2007-02-23	2008-02-26	Kumarevel, T.S.,Karthe, P.,Nakano, N.,Shinkai, A.,Yokoyama, S.	Crystal Structure of Ser 32 to Ala of ST1022 from Sulfolobus tokodaii7	To be Published	0	0	0	0
2EFO	Crystal structure of Tyr77 to Ala of ST1022 from Sulfolobus tokodaii 7	2007-02-23	2008-02-26	Kumarevel, T.S.,Karthe, P.,Nakano, N.,Shinkai, A.,Yokoyama, S.	Crystal Structure of Tyr77 to Ala of ST1022 from Solfolobus tokodaii	To be Published	0	0	0	0
2EFQ	Crystal Structure of Thr134 to Ala of ST1022-Glutamine Complex from Sulfolobus tokodaii 7	2007-02-23	2008-03-04	Kumarevel, T.S.,Karthe, P.,Nakano, N.,Shinkai, A.,Yokoyama, S.	Crystal Structure of Thr134 to Ala of ST1022-Glutamine Complex from Sulfolobus tokodaii 7	To be Published	0	0	0	0
2EG2	The crystal structure of PII protein	2007-02-27	2008-03-04	Sakai, H.,Shinkai, A.,Kitamura, Y.,Kuramitsu, S.,Yokoyama, S.	The crystal structure of PII protein	To be Published	0	0	0	0
2EJV	Crystal structure of threonine 3-dehydrogenase complexed with NAD+	2007-03-20	2008-03-25	Omi, R.,Yao, T.,Goto, M.,Miyahara, I.,Hirotsu, K.	Crystal structure of threonine 3-dehydrogenase	To be Published	0	0	0	0
2EQ8	Crystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdp	2007-03-30	2008-04-01	Nakai, T.,Kamiya, N.	Crystal structure of lipoamide dehydrogenase from Thermus thermophilus HB8	To be Published	0	0	0	0
2EQ9	Crystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdb	2007-03-30	2008-04-01	Nakai, T.,Kamiya, N.	Crystal structure of lipoamide dehydrogenase from Thermus thermophilus HB8	To be Published	0	0	0	0
2YSK	Crystal structure of a hypothetical protein TTHA1432 from Thermus thermophilus	2007-04-03	2008-04-08	Okamoto, A.,Yokoyama, S.,Kuramitsu, S.	Crystal structure of a hypothetical protein TTHA1432 from Thermus thermophilus	To be Published	0	0	0	0
2YR5	Crystal structure of L-phenylalanine oxidase from Psuedomonas sp.P501	2007-04-02	2008-04-15	Ida, K.,Kurabayashi, M.,Suguro, M.,Hikima, T.,Yamamoto, M.,Suzuki, H.	Structural basis of proteplytic activation and the catalytic mechanism of L-phenylalanine oxidase (deaminating and decarboxylating) from Pseudomonas sp.P-501	To be Published	0	0	0	0
2ZIY	Crystal structure of squid rhodopsin	2008-02-27	2008-05-06	Shimamura, T.,Hiraki, K.,Takahashi, N.,Hori, T.,Ago, H.,Masuda, K.,Takio, K.,Ishiguro, M.,Miyano, M.	Crystal structure of squid rhodopsin with intracellularly extended cytoplasmic region	J.Biol.Chem.	2008	283	17753	17756