PDB_ID	STRUCTURE TITLE	DEPOSITION DATE	RELEASE DATE	AUTHORS	TITLE	JOURNAL	YEAR	VOLUME	FIRST PAGE	LAST PAGE
1KUF	High-resolution Crystal Structure of a Snake Venom Metalloproteinase from Taiwan Habu	2002-01-21	2002-07-03	Huang, K.F.,Chiou, S.H.,Ko, T.P.,Yuann, J.M.,Wang, A.H.	The 1.35 A structure of cadmium-substituted TM-3, a snake-venom metalloproteinase from Taiwan habu: elucidation of a TNFalpha-converting enzyme-like active-site structure with a distorted octahedral geometry of cadmium.	Acta Crystallogr.,Sect.D	2002	58	1118	1128
1KUI	Crystal Structure of a Taiwan Habu Venom Metalloproteinase complexed with pEQW.	2002-01-22	2002-07-10	Huang, K.F.,Chiou, S.H.,Ko, T.P.,Wang, A.H.	Determinants of the inhibition of a Taiwan habu venom metalloproteinase by its endogenous inhibitors revealed by X-ray crystallography and synthetic inhibitor analogues.	Eur.J.Biochem.	2002	269	3047	3056
1IXR	RuvA-RuvB complex	2002-07-04	2002-11-06	Yamada, K.,Miyata, T.,Tsuchiya, D.,Oyama, T.,Fujiwara, Y.,Ohnishi, T.,Iwasaki, H.,Shinagawa, H.,Ariyoshi, M.,Mayanagi, K.,Morikawa, K.	Crystal Structure of the RuvA-RuvB Complex: A Structural Basis for the Holliday Junction Migrating Motor Machinery	Mol. Cell	2002	10	671	681
1J33	Crystal structure of CobT from Thermus thermophilus HB8	2003-01-17	2003-02-04	Kunishima, N.,Asada, Y.,Miyano, M.	Crystal Structure of CobT from Thermus thermophilus HB8	To be Published	0	0	0	0
1J3B	Crystal structure of ATP-dependent phosphoenolpyruvate carboxykinase from Thermus thermophilus HB8	2003-01-21	2003-02-11	Sugahara, M.,Ohshima, N.,Ukita, Y.,Kunishima, N.	Structure of ATP-dependent phosphoenolpyruvate carboxykinase from Thermus thermophilus HB8 showing the structural basis of induced fit and thermostability.	Acta Crystallogr.,Sect.D	2005	61	1500	1507
1J22	Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, selenomet derivative	2002-12-25	2003-04-22	Nishino, T.,Komori, K.,Ishino, Y.,Morikawa, K.	X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes	Structure	2003	11	445	457
1J23	Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain	2002-12-25	2003-04-22	Nishino, T.,Komori, K.,Ishino, Y.,Morikawa, K.	X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes	Structure	2003	11	445	457
1J24	Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, Ca cocrystal	2002-12-25	2003-04-22	Nishino, T.,Komori, K.,Ishino, Y.,Morikawa, K.	X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes	Structure	2003	11	445	457
1J25	Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, Mn cocrystal	2002-12-25	2003-04-22	Nishino, T.,Komori, K.,Ishino, Y.,Morikawa, K.	X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes	Structure	2003	11	445	457
1IY8	Crystal Structure of Levodione Reductase	2002-07-25	2003-05-27	Sogabe, S.,Yoshizumi, A.,Fukami, T.,Shiratori, Y.,Shimizu, S.,Takagi, H.,Nakamori, S.,Wada, M.	The Crystal Structure and Stereospecificity of Levodione Reductase from Corynebacterium aquaticum M-13	J.BIOL.CHEM.	2003	278	19387	19395
1IVN	E.coli Thioesterase I/Protease I/Lysophospholiase L1	2002-03-27	2003-07-08	Lo, Y.-C.,Lin, S.-C.,Shaw, J.-F.,Liaw, Y.-C.	Crystal Structure of Escherichia coli Thioesterase I/Protease I/Lysophospholipase L1: Consensus Sequence Blocks Constitute the Catalytic Center of SGNH-hydrolases through a Conserved Hydrogen Bond Network	J.Mol.Biol.	2003	330	539	551
1IWM	Crystal Structure of the Outer Membrane Lipoprotein Receptor, LolB	2002-05-17	2003-07-15	Takeda, K.,Miyatake, H.,Yokota, N.,Matsuyama, S.,Tokuda, H.,Miki, K.	Crystal structures of bacterial lipoprotein localization factors, LolA and LolB.	Embo J.	2003	22	3199	3209
1UG9	Crystal Structure of Glucodextranase from Arthrobacter globiformis I42	2003-06-16	2003-12-09	Mizuno, M.,Tonozuka, T.,Suzuki, S.,Uotsu-Tomita, R.,Kamitori, S.,Nishikawa, A.,Sakano, Y.	Structural insights into substrate specificity and function of glucodextranase	J.Biol.Chem.	2004	279	10575	10583
1UKU	Crystal Structure of Pyrococcus horikoshii CutA1 Complexed with Cu2+	2003-09-01	2004-01-13	Tanaka, Y.,Tsumoto, K.,Nakanishi, T.,Yasutake, Y.,Sakai, N.,Yao, M.,Tanaka, I.,Kumagai, I.	Structural implications for heavy metal-induced reversible assembly and aggregation of a protein: the case of Pyrococcus horikoshii CutA.	Febs Lett.	2004	556	167	174
1V7O	Alanyl-tRNA synthetase editing domain homologue protein from Pyrococcus horikoshii	2003-12-18	2004-01-13	Sokabe, M.,Okada, A.,Yao, M.,Nakashima, T.,Tanaka, I.	Molecular basis of alanine discrimination in editing site	Proc.Natl.Acad.Sci.Usa	2005	102	11669	11674
1VCR	An icosahedral assembly of light-harvesting chlorophyll a/b protein complex from pea thylakoid membranes	2004-03-10	2004-03-30	Hino, T.,Kanamori, E.,Shen, J.R.,Kouyama, T.	An icosahedral assembly of the light-harvesting chlorophyll a/b protein complex from pea chloroplast thylakoid membranes.	Acta Crystallogr.,Sect.D	2004	60	803	809
1UGR	Crystal structure of aT109S mutant of Co-type nitrile hydratase	2003-06-17	2004-06-17	Miyanaga, A.,Fushinobu, S.,Ito, K.,Shoun, H.,Wakagi, T.	Mutational and structural analysis of cobalt-containing nitrile hydratase on substrate and metal binding	Eur.J.Biochem.	2004	271	429	438
1V97	Crystal Structure of Bovine Milk Xanthine Dehydrogenase FYX-051 bound form	2004-01-21	2004-06-22	Okamoto, K.,Matsumoto, K.,Hille, R.,Eger, B.T.,Pai, E.F.,Nishino, T.	The crystal structure of xanthine oxidoreductase during catalysis: Implications for reaction mechanism and enzyme inhibition.	Proc.Natl.Acad.Sci.USA	2004	101	7931	7936
1VD5	Crystal Structure of Unsaturated Glucuronyl Hydrolase, Responsible for the Degradation of Glycosaminoglycan, from Bacillus sp. GL1 at 1.8 A Resolution	2004-03-18	2004-07-13	Itoh, T.,Akao, S.,Hashimoto, W.,Mikami, B.,Murata, K.	Crystal Structure of Unsaturated Glucuronyl Hydrolase, Responsible for the Degradation of Glycosaminoglycan, from Bacillus sp. GL1 at 1.8 A Resolution	J.Biol.Chem.	2004	279	31804	31812
1WD8	Calcium free form of human peptidylarginine deiminase type4 (PAD4)	2004-05-12	2004-07-13	Arita, K.,Hashimoto, H.,Shimizu, T.,Nakashima, K.,Yamada, M.,Sato, M.	Structural basis for Ca(2+)-induced activation of human PAD4	Nat.Struct.Mol.Biol.	2004	11	777	783
1Q1Y	Crystal Structures of Peptide Deformylase from Staphylococcus aureus Complexed with Actinonin	2003-07-23	2004-07-23	Yoon, H.J.,Kim, H.L.,Lee, S.K.,Kim, H.W.,Lee, J.Y.,Mikami, B.,Suh, S.W.	Crystal structure of peptide deformylase from Staphylococcus aureus in complex with actinonin, a naturally occurring antibacterial agent	Proteins	2004	57	639	642
1UJ3	Crystal structure of a humanized Fab fragment of anti-tissue-factor antibody in complex with tissue factor	2003-07-25	2004-07-25	Ohto, U.,Mizutani, R.,Nakamura, M.,Adachi, H.,Satow, Y.	Crystal structure of a humanized Fab fragment of anti-tissue-factor antibody in complex with tissue factor.	J.Synchrotron Radiat.	2004	11	105	108
1WDK	fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native2)	2004-05-17	2004-07-27	Ishikawa, M.,Tsuchiya, D.,Oyama, T.,Tsunaka, Y.,Morikawa, K.	Structural basis for channelling mechanism of a fatty acid beta-oxidation multienzyme complex	Embo J.	2004	23	2745	2754
1PP0	volvatoxin A2 in monoclinic crystal	2003-06-16	2004-08-24	Lin, S.-C.,Lo, Y.-C.,Lin, J.-Y.,Liaw, Y.-C.	Crystal structures and electron micrographs of fungal volvatoxin A2	J.Mol.Biol.	2004	343	477	491
1T1R	Crystal Structure of the Reductoisomerase Complexed with a Bisphosphonate	2004-04-17	2004-09-14	Yajima, S.,Hara, K.,Sanders, J.M.,Yin, F.,Ohsawa, K.,Wiesner, J.,Jomaa, H.,Oldfield, E.	Crystallographic Structures of Two Bisphosphonate:1-Deoxyxylulose-5-Phosphate Reductoisomerase Complexes	J.Am.Chem.Soc.	2004	126	10824	10825
1UMJ	Crystal structure of Pyrococcus horikoshii CutA in the presence of 3M guanidine hydrochloride	2003-10-02	2004-10-05	Tanaka, Y.,Tsumoto, K.,Umetsu, M.,Nakanishi, T.,Yasutake, Y.,Sakai, N.,Yao, M.,Tanaka, I.,Arakawa, T.,Kumagai, I.	Structural evidence for guanidine-protein side chain interactions: crystal structure of CutA from Pyrococcus horikoshii in 3M guanidine hydrochloride	Biochem.Biophys.Res.Comm.	2004	323	185	191
1V76	Crystal Structure of Archaeal Ribonuclease P Protein Ph1771p from Pyrococcus horikoshii OT3	2003-12-12	2004-10-05	Numata, T.,Ishimatsu, I.,Kakuta, Y.,Tanaka, I.,Kimura, M.	Crystal structure of archaeal ribonuclease P protein Ph1771p from Pyrococcus horikoshii OT3: an archaeal homolog of eukaryotic ribonuclease P protein Rpp29	Rna	2004	10	1423	1432
1VGF	volvatoxin A2 (diamond crystal form)	2004-04-24	2004-10-05	Lin, S.-C.,Lo, Y.-C.,Lin, J.-Y.,Liaw, Y.-C.	Crystal structures and electron micrographs of fungal volvatoxin A2	J.Mol.Biol.	2004	343	477	491
1WTD	Crystal structure of type II restrcition endonuclease, EcoO109I DNA-free form	2004-11-22	2004-12-14	Hashimoto, H.,Shimizu, T.,Imasaki, T.,Kato, M.,Shichijo, N.,Kita, K.,Sato, M.	Crystal structures of type II restriction endonuclease EcoO109I and its complex with cognate DNA	J.Biol.Chem.	2005	280	5605	5610
1Y3I	Crystal Structure of Mycobacterium tuberculosis NAD kinase-NAD complex	2004-11-25	2005-01-18	Mori, S.,Yamasaki, M.,Maruyama, Y.,Momma, K.,Kawai, S.,Hashimoto, W.,Mikami, B.,Murata, K.	NAD-binding mode and the significance of intersubunit contact revealed by the crystal structure of Mycobacterium tuberculosis NAD kinase-NAD complex	Biochem.Biophys.Res.Commun.	2005	327	500	508
1WOC	Crystal structure of PriB	2004-08-13	2005-01-25	Shioi, S.,Ose, T.,Maenaka, K.,Shiroishi, M.,Abe, Y.,Kohda, D.,Katayama, T.,Ueda, T.	Crystal structure of a biologically functional form of PriB from Escherichia coli reveals a potential single-stranded DNA-binding site	Biochem.Biophys.Res.Commun.	2005	326	766	776
1WOM	Crystal structure of RsbQ	2004-08-21	2005-02-01	Kaneko, T.,Tanaka, N.,Kumasaka, T.	Crystal structures of RsbQ, a stress-response regulator in Bacillus subtilis	Protein Sci.	2005	14	558	565
1WP9	Crystal structure of Pyrococcus furiosus Hef helicase domain	2004-08-31	2005-02-01	Nishino, T.,Komori, K.,Tsuchiya, D.,Ishino, Y.,Morikawa, K.	Crystal Structure and Functional Implications of Pyrococcus furiosus Hef Helicase Domain Involved in Branched DNA Processing	Structure	2005	13	143	153
1WPR	Crystal structure of RsbQ inhibited by PMSF	2004-09-11	2005-02-01	Kaneko, T.,Tanaka, N.,Kumasaka, T.	Crystal structures of RsbQ, a stress-response regulator in Bacillus subtilis	Protein Sci.	2005	14	558	565
1WSG	Co-crystal structure of E.coli RNase HI active site mutant (E48A/D134N*) with Mn2+	2004-11-05	2005-02-08	Tsunaka, Y.,Takano, K.,Matsumura, H.,Yamagata, Y.,Kanaya, S.	Identification of Single Mn(2+) Binding Sites Required for Activation of the Mutant Proteins of E.coli RNase HI at Glu48 and/or Asp134 by X-ray Crystallography	J.Mol.Biol.	2005	345	1171	1183
1V6A	Crystal Structure of L-lactate dehydrogenase from Cyprinus carpio	2003-11-28	2005-02-15	Watanabe, K.,Motoshima, H.	Crystal Structure of L-lactate dehydrogenase from Cyprinus carpio	To be Published	0	0	0	0
1UL1	Crystal structure of the human FEN1-PCNA complex	2003-09-05	2005-03-01	Sakurai, S.,Kitano, K.,Yamaguchi, H.,Okada, K.,Hamada, K.,Fukuda, K.,Uchida, M.,Ohtsuka, E.,Morioka, H.,Hakoshima, T.	Structural basis for recruitment of human flap endonuclease 1 to PCNA	EMBO J.	2005	24	683	693
1WLS	Crystal structure of L-asparaginase I homologue protein from Pyrococcus horikoshii	2004-06-29	2005-03-15	Yao, M.,Yasutake, Y.,Morita, H.,Tanaka, I.	Structure of the type I L-asparaginase from the hyperthermophilic archaeon Pyrococcus horikoshii at 2.16 angstroms resolution.	Acta Crystallogr.,Sect.D	2005	61	294	301
1U8U	E. coli Thioesterase I/Protease I/Lysophospholiase L1 in complexed with octanoic acid	2004-08-07	2005-04-05	Lo, Y.-C.,Lin, S.-C.,Shaw, J.-F.,Liaw, Y.-C.	Substrate specificities of Escherichia coli thioesterase I/protease I/lysophospholipase L1 are governed by its switch loop movement	Biochemistry	2005	44	1971	1979
1WDQ	The role of an inner loop in the catalytic mechanism of soybean beta-amylase	2004-05-17	2005-04-05	Kang, Y.N.,Tanabe, A.,Adachi, M.,Utsumi, S.,Mikami, B.	Structural analysis of threonine 342 mutants of soybean beta-amylase: role of a conformational change of the inner loop in the catalytic mechanism.	Biochemistry	2005	44	5106	5116
1VD1	Crystal structure of RNase NT in complex with 5'-AMP	2004-03-17	2005-04-26	Kawano, S.,Kakuta, Y.,Kimura, M.	Crystal Structure of the Nicotiana glutinosa Ribonuclease NT in Complex with Nucleotide Monophosphates	to be published	0	0	0	0
1VD3	Ribonuclease NT in complex with 2'-UMP	2004-03-18	2005-04-26	Kawano, S.,Kakuta, Y.,Kimura, M.	Crystal Structure of the Nicotiana glutinosa Ribonuclease NT in Complex with Nucleotide Monophosphates	to be published	0	0	0	0
1WYG	Crystal Structure of a Rat Xanthine Dehydrogenase Triple Mutant (C535A, C992R and C1324S)	2005-02-14	2005-05-31	Nishino, T.,Okamoto, K.,Kawaguchi, Y.,Hori, H.,Matsumura, T.,Eger, B.T.,Pai, E.F.	Mechanism of the Conversion of Xanthine Dehydrogenase to Xanthine Oxidase: IDENTIFICATION OF THE TWO CYSTEINE DISULFIDE BONDS AND CRYSTAL STRUCTURE OF A NON-CONVERTIBLE RAT LIVER XANTHINE DEHYDROGENASE MUTANT	J.Biol.Chem.	2005	280	24888	24894
1V5E	Crystal Structure of Pyruvate oxidase containing FAD, from Aerococcus viridans	2003-11-22	2005-06-28	Hossain, M.T.,Suzuki, K.,Yamamoto, T.,Imamura, S.,Sekiguchi, T.,Takenaka, A.	Crystal Structure of Pyruvate oxidase containing FAD, from Aerococcus viridans	To be Published	0	0	0	0
1VBU	Crystal structure of native xylanase 10B from Thermotoga maritima	2004-03-02	2005-06-28	Ihsanawati,Kumasaka, T.,Kaneko, T.,Morokuma, C.,Yatsunami, R.,Sato, T.,Nakamura, S.,Tanaka, N.	Structural basis of the substrate subsite and the highly thermal stability of xylanase 10B from Thermotoga maritima MSB8	Proteins	2005	61	999	1009
1VDN	Crystal Structure Of Yeast Cyclophilin A Complexed With ACE-Ala-Ala-Pro-Ala-7-Amino-4-Methylcoumarin	2004-03-24	2005-06-28	Konno, M.,Shibano, T.,Okudaira, K.,Takahashi, N.	Crystal Structure Of Yeast Cyclophilin A Complexed With ACE-Ala-Ala-Pro-Ala-7-Amino-4-Methylcoumarin	to be published	0	0	0	0
1VGM	Crystal Structure of an Isozyme of Citrate Synthase from Sulfolbus tokodaii strain7	2004-04-27	2005-06-28	Murakami, M.,Ihara, K.,Kouyama, T.	Crystal Structures of two Isozymes of Citrate Synthase from Sulfolbus tokodaii strain7	TO BE PUBLISHED	0	0	0	0
1VGP	Crystal Structure of an Isozyme of Citrate Synthase from Sulfolbus tokodaii strain7	2004-04-28	2005-06-28	Murakami, M.,Ihara, K.,Kouyama, T.	Crystal Structures of two Isozymes of Citrate Synthase from Sulfolbus tokodaii strain7	TO BE PUBLISHED	0	0	0	0
1X1H	Crystal Structure of Xanthan Lyase (N194A)	2005-04-04	2005-07-19	Maruyama, Y.,Hashimoto, W.,Mikami, B.,Murata, K.	Crystal Structure of Bacillus sp. GL1 Xanthan Lyase Complexed with a Substrate: Insights into the Enzyme Reaction Mechanism	J.Mol.Biol.	2005	350	974	986
1X1I	Crystal Structure of Xanthan Lyase (N194A) Complexed with a Product	2005-04-04	2005-07-19	Maruyama, Y.,Hashimoto, W.,Mikami, B.,Murata, K.	Crystal Structure of Bacillus sp. GL1 Xanthan Lyase Complexed with a Substrate: Insights into the Enzyme Reaction Mechanism	J.Mol.Biol.	2005	350	974	986
1WN7	Crystal structure of archaeal family B DNA polymerase mutant	2004-07-28	2005-08-02	Kuroita, T.,Matsumura, H.,Yokota, N.,Kitabayashi, M.,Hashimoto, H.,Inoue, T.,Imanaka, T.,Kai, Y.	Structural Mechanism for Coordination of Proofreading and Polymerase Activities in Archaeal DNA Polymerases	J.Mol.Biol.	2005	351	291	298
1X0I	Crystal Structure of the Acid Blue Form of Bacteriorhodopsin	2005-03-23	2005-08-02	Okumura, H.,Murakami, M.,Kouyama, T.	Crystal Structures of Acid Blue and Alkaline Purple Forms of Bacteriorhodopsin	J.Mol.Biol.	2005	351	481	495
1X0K	Crystal Structure of Bacteriorhodopsin at pH 10	2005-03-23	2005-08-02	Okumura, H.,Murakami, M.,Kouyama, T.	Crystal Structures of Acid Blue and Alkaline Purple Forms of Bacteriorhodopsin	J.Mol.Biol.	2005	351	481	495
1WKK	Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8 in Complex with GDP	2004-06-01	2005-08-23	Takeishi, S.,Nakagawa, N.,Masui, R.,Kuramitsu, S.	Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8	To be Published	0	0	0	0
1WKL	Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8 in Complex with ATP and ADP	2004-06-01	2005-08-23	Takeishi, S.,Nakagawa, N.,Masui, R.,Kuramitsu, S.	Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8	To be Published	0	0	0	0
1WLZ	Crystal structure of DJBP fragment which was obtained by limited proteolysis	2004-07-01	2005-08-23	Honbou, K.,Suzuki, N.,Horiuchi, M.,Taira, T.,Niki, T.,Ariga, H.,Inagaki, F.	Crystal Structure of DJBP Fragment which was obtained by Limited Proteolysis	To be Published	0	0	0	0
1X0S	Crystal structure of the 13-cis isomer of bacteriorhodopsin	2005-03-28	2005-08-30	Nishikawa, T.,Murakami, M.,Kouyama, T.	Crystal structure of the 13-cis isomer of bacteriorhodopsin in the dark-adapted state.	J.Mol.Biol.	2005	352	319	328
1WMB	Crystal structure of NAD dependent D-3-hydroxybutylate dehydrogenase	2004-07-06	2005-09-06	Ito, K.,Nakajima, Y.,Ichihara, E.,Ogawa, K.,Katayama, N.,Nakashima, K.,Yoshimoto, T.	d-3-Hydroxybutyrate Dehydrogenase from Pseudomonas fragi: Molecular Cloning of the Enzyme Gene and Crystal Structure of the Enzyme	J.Mol.Biol.	2006	355	722	733
1WOY	Crystal structure of methionyl tRNA synthetase Y225F mutant from Thermus thermophilus	2004-08-27	2005-09-13	Konno, M.,Takeda, R.,Nureki, O.,Yokoyama, S.	Crystal structure of methionyl tRNA synthetase Y225F mutant from Thermus thermophilus	TO BE PUBLISHED	0	0	0	0
1X2I	Crystal Structure Of Archaeal Xpf/Mus81 Homolog, Hef From Pyrococcus Furiosus, Helix-hairpin-helix Domain	2005-04-24	2005-09-13	Nishino, T.,Komori, K.,Ishino, Y.,Morikawa, K.	Structural and Functional Analyses of an Archaeal XPF/Rad1/Mus81 Nuclease: Asymmetric DNA Binding and Cleavage Mechanisms	STRUCTURE	2005	13	1183	1192
1VGO	Crystal Structure of Archaerhodopsin-2	2004-04-28	2005-10-04	Enami, N.,Yoshimura, K.,Murakami, M.,Okumura, H.,Ihara, K.,Kouyama, T.	Crystal structures of archaerhodopsin-1 and -2: Common structural motif in archaeal light-driven proton pumps	J.Mol.Biol.	2006	358	675	685
1WOZ	Crystal structure of uncharacterized protein ST1454 from Sulfolobus tokodaii	2004-08-27	2005-10-04	Sasaki, T.,Tanaka, Y.,Yasutake, Y.,Yao, M.,Tanaka, I.,Tsumoto, K.,Kumagai, I.	Crystal structure of the uncharacterized protein ST1454 from Sulfolobus tokodaii.	To be Published	0	0	0	0
2CWF	Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH	2005-06-20	2005-10-04	Goto, M.,Muramatsu, H.,Mihara, H.,Kurihara, T.,Esaki, N.,Omi, R.,Miyahara, I.,Hirotsu, K.	Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction	J.Biol.Chem.	2005	280	40875	40884
2CWH	Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH and pyrrole-2-carboxylate	2005-06-20	2005-10-04	Goto, M.,Muramatsu, H.,Mihara, H.,Kurihara, T.,Esaki, N.,Omi, R.,Miyahara, I.,Hirotsu, K.	Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction	J.Biol.Chem.	2005	280	40875	40884
1WNZ	Isoleucyl-tRNA synthetase editing domain complexed with the post-transfer editing substrate analogue, Val-2AA	2004-08-11	2005-10-25	Fukunaga, R.,Yokoyama, S.	Structural basis for substrate recognition by the editing domain of isoleucyl-tRNA synthetase	J.Mol.Biol.	2006	359	901	912
2D2M	Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi	2005-09-12	2005-10-25	Numoto, N.,Nakagawa, T.,Kita, A.,Sasayama, Y.,Fukumori, Y.,Miki, K.	Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi.	Proc.Natl.Acad.Sci.USA	2005	102	14521	14526
2D2N	Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi	2005-09-12	2005-10-25	Numoto, N.,Nakagawa, T.,Kita, A.,Sasayama, Y.,Fukumori, Y.,Miki, K.	Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi.	Proc.Natl.Acad.Sci.USA	2005	102	14521	14526
1YUM	Crystal Structure of Nicotinic Acid Mononucleotide Adenylyltransferase from Pseudomonas aeruginosa	2005-02-14	2005-11-08	Yoon, H.J.,Kim, H.L.,Mikami, B.,Suh, S.W.	Crystal structure of nicotinic acid mononucleotide adenylyltransferase from Pseudomonas aeruginosa in its Apo and substrate-complexed forms reveals a fully open conformation	J.Mol.Biol.	2005	351	258	265
2CWS	Crystal structure at 1.0 A of alginate lyase A1-II', a member of polysaccharide lyase family-7	2005-06-25	2005-11-15	Yamasaki, M.,Ogura, K.,Hashimoto, W.,Mikami, B.,Murata, K.	A Structural Basis for Depolymerization of Alginate by Polysaccharide Lyase Family-7	J.Mol.Biol.	2005	352	11	21
1WOL	Crystal Structure of ST0689, an archaeal HEPN homologue	2004-08-20	2005-11-22	Arakawa, T.,Akutsu, J.,Yohda, M.	Crystal Structure Analysis of ST0689, an archaeal HEPN protein	To be Published	0	0	0	0
2D3I	Crystal Structure of Aluminum-Bound Ovotransferrin at 2.15 Angstrom Resolution	2005-09-28	2005-11-29	Mizutani, K.,Mikami, B.,Aibara, S.,Hirose, M.	Structure of aluminium-bound ovotransferrin at 2.15 Angstroms resolution.	Acta Crystallogr.,Sect.D	2005	61	1636	1642
2F5G	Crystal structure of IS200 transposase	2005-11-25	2005-12-13	Lee, H.H.,Yoon, J.Y.,Kim, H.S.,Kang, J.Y.,Kim, K.H.,Kim, D.J.,Ha, J.Y.,Mikami, B.,Yoon, H.J.,Suh, S.W.	Crystal Structure of a Metal Ion-bound IS200 Transposase	J.Biol.Chem.	2006	281	4261	4266
1X0R	Thioredoxin Peroxidase from Aeropyrum pernix K1	2005-03-28	2005-12-20	Nakamura, T.,Yamamoto, T.,Inoue, T.,Matsumura, H.,Kobayashi, A.,Hagihara, Y.,Uegaki, K.,Ataka, M.,Kai, Y.,Ishikawa, K.	Crystal structure of thioredoxin peroxidase from aerobic hyperthermophilic archaeon Aeropyrum pernix K1	Proteins	2006	62	822	826
1X1P	Crystal structure of Tk-RNase HII(1-197)-A(28-42)	2005-04-11	2006-01-17	Takano, K.,Endo, S.,Mukaiyama, A.,Chon, H.,Matsumura, H.,Koga, Y.,Kanaya, S.	Structure of amyloid beta fragments in aqueous environments	Febs J.	2006	273	150	158
1WZ1	Crystal structure of the Fv fragment complexed with dansyl-lysine	2005-02-21	2006-01-31	Nakasako, M.,Oka, T.,Mashumo, M.,Takahashi, H.,Shimada, I.,Yamaguchi, Y.,Kato, K.,Arata, Y.	Conformational dynamics of complementarity-determining region H3 of an anti-dansyl Fv fragment in the presence of its hapten	J.Mol.Biol.	2005	351	627	640
2D9Q	Crystal Structure of the Human GCSF-Receptor Signaling Complex	2005-12-12	2006-02-07	Tamada, T.,Honjo, E.,Maeda, Y.,Okamoto, T.,Ishibashi, M.,Tokunaga, M.,Kuroki, R.	Homodimeric cross-over structure of the human granulocyte colony-stimulating factor (GCSF) receptor signaling complex	Proc.Natl.Acad.Sci.Usa	2006	103	3135	3140
1WUA	The structure of Aplyronine A-actin complex	2004-12-03	2006-02-14	Hirata, K.,Muraoka, S.,Suenaga, K.,Kuroda, T.,Kato, K.,Tanaka, H.,Yamamoto, M.,Takata, M.,Yamada, K.,Kigoshi, H.	Structure basis for antitumor effect of aplyronine a	J.Mol.Biol.	2006	356	945	954
2D0O	Strcuture of diol dehydratase-reactivating factor complexed with ADP and Mg2+	2005-08-05	2006-02-28	Shibata, N.,Mori, K.,Hieda, N.,Higuchi, Y.,Yamanishi, M.,Toraya, T.	Release of a damaged cofactor from a coenzyme B12-dependent enzyme: X-ray structures of diol dehydratase-reactivating factor	Structure	2005	13	1745	1754
2D31	Crystal structure of disulfide-linked HLA-G dimer	2005-09-23	2006-03-14	Shiroishi, M.,Kuroki, K.,Ose, T.,Rasubala, L.,Shiratori, I.,Arase, H.,Tsumoto, K.,Kumagai, I.,Kohda, D.,Maenaka, K.	Efficient Leukocyte Ig-like Receptor Signaling and Crystal Structure of Disulfide-linked HLA-G Dimer	J.Biol.Chem.	2006	281	10439	10447
1WVM	Crystal Structure of Psychrophilic Subtilisin-like Serine Protease APA1 from Antarctic Psychrotroph Pseudoaleromonas sp. AS-11, Complexed with Inhibitor Chymostatin	2004-12-16	2006-03-21	Dong, D.,Watanabe, K.	Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.16 nm resolution	To be Published	0	0	0	0
2DEW	Crystal structure of human peptidylarginine deiminase 4 in complex with histone H3 N-terminal tail including Arg8	2006-02-18	2006-04-11	Arita, K.,Shimizu, T.,Hashimoto, H.,Hidaka, Y.,Yamada, M.,Sato, M.	Structural basis for histone N-terminal recognition by human peptidylarginine deiminase 4	Proc.Natl.Acad.Sci.Usa	2006	103	5291	5296
2DEY	Crystal structure of human peptidylarginine deiminase 4 in complex with histone H4 N-terminal tail including Arg3	2006-02-18	2006-04-11	Arita, K.,Shimizu, T.,Hashimoto, H.,Hidaka, Y.,Yamada, M.,Sato, M.	Structural basis for histone N-terminal recognition by human peptidylarginine deiminase 4	Proc.Natl.Acad.Sci.Usa	2006	103	5291	5296
2DNS	The crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 complexed with D-Phenylalanine	2006-04-26	2006-05-09	Okazaki, S.,Suzuki, A.,Komeda, H.,Yamaguchi, S.,Asano, Y.,Yamane, T.	Crystal Structure and Functional Characterization of a D-Stereospecific Amino Acid Amidase from Ochrobactrum anthropi SV3, a New Member of the Penicillin-recognizing Proteins	J.Mol.Biol.	2007	368	79	91
2CV3	Crystal structure of porcine pancreatic elastase complexed with a macroclyclic peptide inhibitor	2005-05-31	2006-05-16	Kinoshita, T.,Kitatani, T.,Warizaya, M.,Tada, T.	Structure of the complex of porcine pancreatic elastase with a trimacrocyclic peptide inhibitor FR901451	Acta Crystallogr., Sect.F	2005	61	808	811
2CXQ	Crystal structure of mouse AMF / S6P complex	2005-06-30	2006-05-23	Tanaka, N.,Haga, A.,Naba, N.,Shiraiwa, K.,Kusakabe, Y.,Hashimoto, K.,Funasaka, T.,Nagase, H.,Raz, A.,Nakamura, K.T.	Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors	J.Mol.Biol.	2006	356	312	324
2CXS	Crystal structure of mouse AMF / F6P complex	2005-06-30	2006-05-23	Tanaka, N.,Haga, A.,Naba, N.,Shiraiwa, K.,Kusakabe, Y.,Hashimoto, K.,Funasaka, T.,Nagase, H.,Raz, A.,Nakamura, K.T.	Crystal structures of mouse autocrine motility factor in complex with carbohydrate phosphate inhibitors provide insight into structure-activity relationship of the inhibitors	J.Mol.Biol.	2006	356	312	324
2FV0	UGL_D88N/dGlcA-Glc-Rha-Glc	2006-01-28	2006-05-30	Itoh, T.,Hashimoto, W.,Mikami, B.,Murata, K.	Substrate recognition by unsaturated glucuronyl hydrolase from Bacillus sp. GL1	Biochem.Biophys.Res.Commun.	2006	344	253	262
2FV1	UGL_D88N/dGlcA-GlcNAc	2006-01-28	2006-05-30	Itoh, T.,Hashimoto, W.,Mikami, B.,Murata, K.	Substrate recognition by unsaturated glucuronyl hydrolase from Bacillus sp. GL1	Biochem.Biophys.Res.Commun.	2006	344	253	262
2DI4	Crystal structure of the FtsH protease domain	2006-03-28	2006-06-27	Suno, R.,Niwa, H.,Tsuchiya, D.,Zhang, X.,Yoshida, M.,Morikawa, K.	Structure of the Whole Cytosolic Region of ATP-Dependent Protease FtsH	Mol.Cell	2006	22	575	585
1X0U	Crystal Structure of the carboxyl transferase subunit of putative PCC of Sulfolobus tokodaii	2005-03-29	2006-07-04	Kakuta, Y.,Sueda, S.,Kondo, H.	Crystal Structure of the carboxyl transferase subunit of putative PCC of Sulfolobus tokodaii	To be Published	0	0	0	0
2DRW	The crystal structutre of D-amino acid amidase from Ochrobactrum anthropi SV3	2006-06-15	2006-07-04	Okazaki, S.,Suzuki, A.,Komeda, H.,Yamaguchi, S.,Asano, Y.,Yamane, T.	Crystal Structure and Functional Characterization of a D-Stereospecific Amino Acid Amidase from Ochrobactrum anthropi SV3, a New Member of the Penicillin-recognizing Proteins	J.Mol.Biol.	2007	368	79	91
2CWR	Crystal structure of chitin biding domain of chitinase from Pyrococcus furiosus	2005-06-24	2006-07-11	Uegaki, K.,Nakamura, T.,Ishikawa, K.,Matsumura, H.	NMR and X-ray crystal structures of the chitin-binding domain of hyperthermophilic chitinase from Pyrococcus furiosus	To be Published	0	0	0	0
2D4C	Crystal structure of the endophilin BAR domain mutant	2005-10-13	2006-07-11	Masuda, M.,Takeda, S.,Sone, M.,Ohki, T.,Mori, H.,Kamioka, Y.,Mochizuki, N.	Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms	Embo J.	2006	25	2889	2897
1X19	Crystal structure of BchU involved in bacteriochlorophyll c biosynthesis	2005-04-02	2006-07-18	Wada, K.,Yamaguchi, H.,Harada, J.,Niimi, K.,Osumi, S.,Saga, Y.,Oh-Oka, H.,Tamiaki, H.,Fukuyama, K.	Crystal Structures of BchU, a Methyltransferase Involved in Bacteriochlorophyll c Biosynthesis, and its Complex with S-adenosylhomocysteine: Implications for Reaction Mechanism.	J.Mol.Biol.	2006	360	839	849
1X19	Crystal structure of BchU involved in bacteriochlorophyll c biosynthesis	2005-04-02	2006-07-18	Wada, K.,Yamaguchi, H.,Harada, J.,Niimi, K.,Osumi, S.,Saga, Y.,Oh-Oka, H.,Tamiaki, H.,Fukuyama, K.	Crystal Structures of BchU, a Methyltransferase Involved in Bacteriochlorophyll c Biosynthesis, and its Complex with S-adenosylhomocysteine: Implications for Reaction Mechanism.	J.Mol.Biol.	2006	360	839	849
1X1D	Crystal structure of BchU complexed with S-adenosyl-L-homocysteine and Zn-bacteriopheophorbide d	2005-04-04	2006-07-18	Wada, K.,Yamaguchi, H.,Harada, J.,Niimi, K.,Osumi, S.,Saga, Y.,Oh-Oka, H.,Tamiaki, H.,Fukuyama, K.	Crystal Structures of BchU, a Methyltransferase Involved in Bacteriochlorophyll c Biosynthesis, and its Complex with S-adenosylhomocysteine: Implications for Reaction Mechanism.	J.Mol.Biol.	2006	360	839	849
2A4X	Crystal Structure Of Mitomycin C-Binding Protein Complexed with Metal-Free Bleomycin A2	2005-06-30	2006-07-18	Danshiitsoodol, N.,de Pinho, C.A.,Matoba, Y.,Kumagai, T.,Sugiyama, M.	The Mitomycin C (MMC)-binding Protein from MMC-producing Microorganisms Protects from the Lethal Effect of Bleomycin: Crystallographic Analysis to Elucidate the Binding Mode of the Antibiotic to the Protein	J.Mol.Biol.	2006	360	398	408
2D0B	Crystal structure of Bst-RNase HIII in complex with Mg2+	2005-07-31	2006-07-18	Chon, H.,Matsumura, H.,Koga, Y.,Takano, K.,Kanaya, S.	Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus	J.Mol.Biol.	2006	356	165	178
2DKE	Crystal structure of substrate-free form of PcyA	2006-04-10	2006-07-25	Hagiwara, Y.,Sugishima, M.,Takahashi, Y.,Fukuyama, K.	Induced-fitting and electrostatic potential change of PcyA upon substrate binding demonstrated by the crystal structure of the substrate-free form	Febs Lett.	2006	580	3823	3828
2AHF	Unsaturated glucuronyl hydrolase mutant D88N	2005-07-28	2006-08-15	Itoh, T.,Hashimoto, W.,Mikami, B.,Murata, K.	Crystal Structure of Unsaturated Glucuronyl Hydrolase Complexed with Substrate: MOLECULAR INSIGHTS INTO ITS CATALYTIC REACTION MECHANISM	J.Biol.Chem.	2006	281	29807	29816
2AHG	Unsaturated glucuronyl hydrolase mutant D88N with dGlcA-GalNAc	2005-07-28	2006-08-15	Itoh, T.,Hashimoto, W.,Mikami, B.,Murata, K.	Crystal Structure of Unsaturated Glucuronyl Hydrolase Complexed with Substrate: MOLECULAR INSIGHTS INTO ITS CATALYTIC REACTION MECHANISM	J.Biol.Chem.	2006	281	29807	29816
2D5J	Unsaturated Glucuronyl Hydrolase Triggers Hydration of Vinyl Ether Group but not of Glycosidic Bond	2005-11-02	2006-08-15	Itoh, T.,Hashimoto, W.,Mikami, B.,Murata, K.	Crystal Structure of Unsaturated Glucuronyl Hydrolase Complexed with Substrate: MOLECULAR INSIGHTS INTO ITS CATALYTIC REACTION MECHANISM	J.Biol.Chem.	2006	281	29807	29816
2DKN	Crystal structure of the 3-alpha-hydroxysteroid dehydrogenase from Pseudomonas sp. B-0831 complexed with NADH	2006-04-12	2006-08-15	Nakamura, S.,Oda, M.,Kataoka, S.,Ueda, S.,Uchiyama, S.,Yoshida, T.,Kobayashi, Y.,Ohkubo, T.	Apo- and Holo-structures of 3{alpha}-Hydroxysteroid Dehydrogenase from Pseudomonas sp. B-0831: LOOP-HELIX TRANSITION INDUCED BY COENZYME BINDING	J.Biol.Chem.	2006	281	31876	31884
2GH4	YteR/D143N/dGalA-Rha	2006-03-25	2006-08-29	Itoh, T.,Ochiai, A.,Mikami, B.,Hashimoto, W.,Murata, K.	Structure of unsaturated rhamnogalacturonyl hydrolase complexed with substrate	Biochem.Biophys.Res.Commun.	2006	347	1021	1029
2DCM	The Crystal Structure of S603A Mutated Prolyl Tripeptidyl Aminopeptidase Complexed with Substrate	2006-01-09	2006-09-19	Ito, K.,Nakajima, Y.,Xu, Y.,Yamada, N.,Onohara, Y.,Ito, T.,Matsubara, F.,Kabashima, T.,Nakayama, K.,Yoshimoto, T.	Crystal Structure and Mechanism of Tripeptidyl Activity of Prolyl Tripeptidyl Aminopeptidase from Porphyromonas gingivalis	J.Mol.Biol.	2006	362	228	240
2B9U	Crystal structure of dTDP-4-dehydrorhamnose 3,5-epimerase from sulfolobus tokodaii	2005-10-13	2006-10-13	Rajakannan, V.,Kondo, K.,Mizushima, T.,Suzuki, A.,Yamane, T.	Crystal structure of dTDP-4-dehydrorhamnose 3,5-epimerase from sulfolobus tokodaii	TO BE PUBLISHED	0	0	0	0
2D7G	Crystal structure of the aa complex of the N-terminal domain of PriA	2005-11-21	2006-11-07	Sasaki, K.,Ose, T.,Okamoto, N.,Tanaka, T.,Maenaka, K.,Masai, H.,Kohda, D.	Structural basis for the specific recognition of the 3' terminal nucleotide of DNA by the PriA protein from E. coli	To be Published	0	0	0	0
2D7H	Crystal structure of the ccc complex of the N-terminal domain of PriA	2005-11-21	2006-11-07	Sasaki, K.,Ose, T.,Okamoto, N.,Tanaka, T.,Maenaka, K.,Masai, H.,Kohda, D.	Structural basis for the specific recognition of the 3' terminal nucleotide of DNA by the PriA protein from E. coli	To be Published	0	0	0	0
2DWL	Crystal structure of the PriA protein complexed with oligonucleotides	2006-08-15	2006-11-07	Sasaki, K.,Ose, T.,Okamoto, N.,Tanaka, T.,Maenaka, K.,Shirai, T.,Masai, H.,Kohda, D.	Insights into base nonselective recognition of 3'-terminus of DNA in stalled replication forks by the PriA protein	To be Published	0	0	0	0
2DWM	Crystal structure of the PriA protein complexed with oligonucleotides	2006-08-15	2006-11-07	Sasaki, K.,Ose, T.,Okamoto, N.,Tanaka, T.,Maenaka, K.,Shirai, T.,Masai, H.,Kohda, D.	Insights into base nonselective recognition of 3'-terminus of DNA in stalled replication forks by the PriA protein	To be Published	0	0	0	0
2DWN	Crystal structure of the PriA protein complexed with oligonucleotides	2006-08-15	2006-11-07	Sasaki, K.,Ose, T.,Okamoto, N.,Tanaka, T.,Maenaka, K.,Shirai, T.,Masai, H.,Kohda, D.	Insights into base nonselective recognition of 3'-terminus of DNA in stalled replication forks by the PriA protein	To be Published	0	0	0	0
2D32	Crystal Structure of Michaelis Complex of gamma-Glutamylcysteine Synthetase	2005-09-25	2006-11-14	Hibi, T.,Nakayama, M.,Nii, H.,Kurokawa, Y.,Katano, H.,Oda, J.	Structural basis of efficient coupling peptide ligation and ATP hydrolysis by gamma-gluatamylcysteine synthetase	To be Published	0	0	0	0
2D4V	Crystal structure of NAD dependent isocitrate dehydrogenase from Acidithiobacillus thiooxidans	2005-10-24	2006-11-14	Imada, K.,Tamura, T.,Takenaka, R.,Kobayashi, I.,Namba, K.,Inagaki, K.	Structure and quantum chemical analysis of NAD+-dependent isocitrate dehydrogenase: hydride transfer and co-factor specificity	Proteins	2008	70	63	71
2D5F	Crystal Structure of Recombinant Soybean Proglycinin A3B4 subunit, its Comparison with Mature Glycinin A3B4 subunit, Responsible for Hexamer Assembly	2005-11-01	2006-11-14	Itoh, T.,Adachi, M.,Masuda, T.,Mikami, B.,Utsumi, S.	Crystal Structure of Recombinant Soybean Proglycinin A3B4 subunit, its Comparison with Mature Glycinin A3B4 subunit, Responsible for Hexamer Assembly	To be Published	0	0	0	0
2D8L	Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc	2005-12-06	2006-11-14	Itoh, T.,Ochiai, A.,Mikami, B.,Hashimoto, W.,Murata, K.	A novel glycoside hydrolase family 105: the structure of family 105 unsaturated rhamnogalacturonyl hydrolase complexed with a disaccharide in comparison with family 88 enzyme complexed with the disaccharide	J.Mol.Biol.	2006	360	573	585
2EVX	Crystal structure of pumpkin seed globulin	2005-11-01	2006-11-14	Itoh, T.,Fukuda, T.,Mikami, B.,Utsumi, S.	Crystal Structure of Pumpkin Seed Globulin	To be Published	0	0	0	0
2DOO	The structure of IMP-1 complexed with the detecting reagent (DansylC4SH) by a fluorescent probe	2006-05-01	2006-11-28	Kurosaki, H.,Yamaguchi, Y.,Yasuzawa, H.,Jin, W.,Yamagata, Y.,Arakawa, Y.	Probing, inhibition, and crystallographic characterization of metallo-beta-lactamase (IMP-1) with fluorescent agents containing dansyl and thiol groups	Chemmedchem	2006	1	969	972
2E0X	Crystal Structure of Gamma-glutamyltranspeptidase from Escherichia coli (monoclinic form)	2006-10-16	2006-11-28	Okada, T.,Suzuki, H.,Wada, K.,Kumagai, H.,Fukuyama, K.	Crystal structure of the gamma-glutamyltranspeptidase precursor protein from Escherichia coli. Structural changes upon autocatalytic processing and implications for the maturation mechanism	J.Biol.Chem.	2007	282	2433	2439
2DU2	Crystal Structure Analysis of the L-Lactate Oxidase	2006-07-19	2006-12-05	Umena, Y.,Yorita, K.,Matsuoka, T.,Kita, A.,Fukui, K.,Morimoto, Y.	The crystal structure of L-lactate oxidase from Aerococcus viridans at 2.1A resolution reveals the mechanism of strict substrate recognition	Biochem.Biophys.Res.Commun.	2006	350	249	256
2E1E	Crystal structure of the HRDC Domain of Human Werner Syndrome Protein, WRN	2006-10-25	2006-12-12	Kitano, K.,Yoshihara, N.,Hakoshima, T.	Crystal structure of the HRDC domain of human Werner syndrome protein, WRN	J.Biol.Chem.	2007	282	2717	2728
2E1F	Crystal structure of the HRDC Domain of Human Werner Syndrome Protein, WRN	2006-10-25	2006-12-12	Kitano, K.,Yoshihara, N.,Hakoshima, T.	Crystal structure of the HRDC domain of human Werner syndrome protein, WRN	J.Biol.Chem.	2007	282	2717	2728
2D54	Crystal Structure of Methionyl tRNA Synthetase Y225A Mutant from Thermus Thermophilus	2005-10-28	2006-12-19	Konno, M.,Takeda, R.,Takasaka, R.,Mori, Y.,Ishii, R.,Yokoyama, S.	Y225F/Amutation for Met-tRNA synthetase reveals importance of hydrophobic circumstance	To be Published	0	0	0	0
2E24	crystal structure of a mutant (R612A) of xanthan lyase	2006-11-07	2007-01-30	Maruyama, Y.,Mikami, B.,Hashimoto, W.,Murata, K.	A Structural Factor Responsible for Substrate Recognition by Bacillus sp. GL1 Xanthan Lyase that Acts Specifically on Pyruvated Side Chains of Xanthan	Biochemistry	2007	46	781	791
2DSK	Crystal structure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus	2006-06-30	2007-02-06	Nakamura, T.,Mine, S.,Hagihara, Y.,Ishikawa, K.,Uegaki, K.	Structure of the catalytic domain of the hyperthermophilic chitinase from Pyrococcus furiosus	ACTA CRYSTALLOGR.,SECT.F	2007	63	7	11
2DFH	Crystal structure of Tk-RNase HII(1-212)-C	2006-03-01	2007-03-06	Takano, K.,Katagiri, Y.,Mukaiyama, A.,Chon, H.,Matsumura, H.,Koga, Y.,Kanaya, S.	Conformational contagion in a protein: Structural properties of a chameleon sequence	Proteins	2007	68	617	625
2DFI	Crystal structure of Pf-MAP(1-292)-C	2006-03-01	2007-03-06	Takano, K.,Katagiri, Y.,Mukaiyama, A.,Chon, H.,Matsumura, H.,Koga, Y.,Kanaya, S.	Conformational contagion in a protein: Structural properties of a chameleon sequence	Proteins	2007	68	617	625
2EFU	The crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 complexed with L-phenylalanine	2007-02-26	2007-03-06	Okazaki, S.,Suzuki, A.,Mizushima, T.,Komeda, H.,Asano, Y.,Yamane, T.	Structures of D-amino-acid amidase complexed with L-phenylalanine and with L-phenylalanine amide: insight into the D-stereospecificity of D-amino-acid amidase from Ochrobactrum anthropi SV3	Acta Crystallogr.,Sect.D	2008	64	331	334
2DGJ	Crystal structure of EbhA (756-1003 domain) from Staphylococcus aureus	2006-03-14	2007-03-20	Tanaka, Y.,Sakamoto, S.,Kuroda, M.,Goda, S.,Gao, Y.-G.,Tsumoto, K.,Hiragi, Y.,Yao, M.,Watanabe, N.,Ohta, T.,Tanaka, I.	A helical string of alternately connected three-helix bundles for the cell wall-associated adhesion protein Ebh from Staphylococcus aureus	Structure	2008	16	488	496
2EGK	Crystal Structure of Tamalin PDZ-Intrinsic Ligand Fusion Protein	2007-03-01	2007-05-08	Sugi, T.,Oyama, T.,Muto, T.,Nakanishi, S.,Morikawa, K.,Jingami, H.	Crystal structures of autoinhibitory PDZ domain of Tamalin: implications for metabotropic glutamate receptor trafficking regulation	Embo J.	2007	26	2192	2205
2UWM	C-TERMINAL DOMAIN(WH2-WH4) OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA	2007-03-22	2007-05-08	Ose, T.,Soler, N.,Rasubala, L.,Kuroki, K.,Kohda, D.,Fourmy, D.,Yoshizawa, S.,Maenaka, K.	Structure Basis for Dynamical Interdomain Movement and RNA Recognition of the Selenocystein-Specific Elongation Factor Selb	To be Published	0	0	0	0
2DPH	Crystal Structure of Formaldehyde dismutase	2006-05-11	2007-05-29	Hasegawa, T.,Yamano, A.,Miura, K.,Katsube, Y.,Yanase, H.,Kato, N.	The X-ray crystal structure of formaldehyde dismutase at 2.3  A resolution	Acta Crystallogr.,Sect.A	2002	58	0	0
2DQL	Crytal structure of the circadian clock associated protein Pex from anabaena	2006-05-29	2007-05-29	Kurosawa, T.,Iwase, R.,Kouyama, T.,Sakata, S.,Murakami, M.,Hasegawa, D.,Uzumaki, T.,Hayashi, F.,Ishiura, M.	Crystal structure of the circadian clock associated protein Pex from anabena	To be Published	0	0	0	0
2P9J	Crystal structure of AQ2171 from Aquifex aeolicus	2007-03-26	2007-05-29	Yang, H.,Chen, L.,Agari, Y.,Ebihara, A.,Shinkai, A.,Kuramitsu, S.,Yokoyama, S.,Rose, J.P.,Wang, B-C.	Crystal structure of AQ2171 from Aquifex aeolicus	To be Published	0	0	0	0
2DQA	Crystal Structure of Tapes japonica Lysozyme	2006-05-24	2007-06-12	Goto, T.,Abe, Y.,Kakuta, Y.,Takeshita, K.,Imoto, T.,Ueda, T.	Crystal Structure of Tapes japonica Lysozyme with Substrate Analogue: STRUCTURAL BASIS OF THE CATALYTIC MECHANISM AND MANIFESTATION OF ITS CHITINASE ACTIVITY ACCOMPANIED BY QUATERNARY STRUCTURAL CHANGE	J.Biol.Chem.	2007	282	27459	27467
2DLC	Crystal structure of the ternary complex of yeast tyrosyl-tRNA synthetase	2006-04-18	2007-06-12	Tsunoda, M.,Kusakabe, Y.,Tanaka, N.,Ohno, S.,Nakamura, M.,Senda, T.,Moriguchi, T.,Asai, N.,Sekine, M.,Yokogawa, T.,Nishikawa, K.,Nakamura, K.T.	Structural basis for recognition of cognate tRNA by tyrosyl-tRNA synthetase from three kingdoms	To be Published	0	0	0	0
2E56	Crystal structure of human MD-2	2006-12-19	2007-06-26	Ohto, U.,Fukase, K.,Miyake, K.,Satow, Y.	Crystal Structures of Human MD-2 and Its Complex with Antiendotoxic Lipid IVa	SCIENCE	2007	316	1632	1634
2E59	Crystal structure of human MD-2 in complex with lipid IVa	2006-12-19	2007-06-26	Ohto, U.,Fukase, K.,Miyake, K.,Satow, Y.	Crystal Structures of Human MD-2 and Its Complex with Antiendotoxic Lipid IVa	SCIENCE	2007	316	1632	1634
2EB4	Crystal structure of apo-HpcG	2007-02-07	2007-07-17	Izumi, A.,Rea, D.,Adachi, T.,Unzai, S.,Park, S.Y.,Roper, D.I.,Tame, J.R.H.	Structure and Mechanism of HpcG, a Hydratase in the Homoprotocatechuate Degradation Pathway of Escherichia coli	J.Mol.Biol.	2007	370	899	911
2EB5	Crystal structure of HpcG complexed with oxalate	2007-02-07	2007-07-17	Izumi, A.,Rea, D.,Adachi, T.,Unzai, S.,Park, S.Y.,Roper, D.I.,Tame, J.R.H.	Structure and Mechanism of HpcG, a Hydratase in the Homoprotocatechuate Degradation Pathway of Escherichia coli	J.Mol.Biol.	2007	370	899	911
2E0J	Mutant Human Ribonuclease 1 (R31L, R32L)	2006-10-10	2007-08-28	Yamada, H.,Tamada, T.,Kosaka, M.,Miyata, K.,Fujiki, S.,Tano, M.,Moriya, M.,Yamanishi, M.,Honjo, E.,Tada, H.,Ino, T.,Yamaguchi, H.,Futami, J.,Seno, M.,Nomoto, T.,Hirata, T.,Yoshimura, M.,Kuroki, R.	'Crystal lattice engineering,' an approach to engineer protein crystal contacts by creating intermolecular symmetry: crystallization and structure determination of a mutant human RNase 1 with a hydrophobic interface of leucines	Protein Sci.	2007	16	1389	1397
2E0L	Mutant Human Ribonuclease 1 (Q28L, R31L, R32L)	2006-10-10	2007-08-28	Yamada, H.,Tamada, T.,Kosaka, M.,Miyata, K.,Fujiki, S.,Tano, M.,Moriya, M.,Yamanishi, M.,Honjo, E.,Tada, H.,Ino, T.,Yamaguchi, H.,Futami, J.,Seno, M.,Nomoto, T.,Hirata, T.,Yoshimura, M.,Kuroki, R.	'Crystal lattice engineering,' an approach to engineer protein crystal contacts by creating intermolecular symmetry: crystallization and structure determination of a mutant human RNase 1 with a hydrophobic interface of leucines	Protein Sci.	2007	16	1389	1397
2E0M	Mutant Human Ribonuclease 1 (T24L, Q28L, R31L, R32L)	2006-10-10	2007-08-28	Yamada, H.,Tamada, T.,Kosaka, M.,Miyata, K.,Fujiki, S.,Tano, M.,Moriya, M.,Yamanishi, M.,Honjo, E.,Tada, H.,Ino, T.,Yamaguchi, H.,Futami, J.,Seno, M.,Nomoto, T.,Hirata, T.,Yoshimura, M.,Kuroki, R.	'Crystal lattice engineering,' an approach to engineer protein crystal contacts by creating intermolecular symmetry: crystallization and structure determination of a mutant human RNase 1 with a hydrophobic interface of leucines	Protein Sci.	2007	16	1389	1397
2E0O	Mutant Human Ribonuclease 1 (V52L, D53L, N56L, F59L)	2006-10-10	2007-08-28	Yamada, H.,Tamada, T.,Kosaka, M.,Miyata, K.,Fujiki, S.,Tano, M.,Moriya, M.,Yamanishi, M.,Honjo, E.,Tada, H.,Ino, T.,Yamaguchi, H.,Futami, J.,Seno, M.,Nomoto, T.,Hirata, T.,Yoshimura, M.,Kuroki, R.	'Crystal lattice engineering,' an approach to engineer protein crystal contacts by creating intermolecular symmetry: crystallization and structure determination of a mutant human RNase 1 with a hydrophobic interface of leucines	Protein Sci.	2007	16	1389	1397
2E2R	Crystal structure of human estrogen-related receptor gamma ligand binding domain complex with bisphenol A	2006-11-16	2007-09-11	Matsushima, A.,Kakuta, Y.,Teramoto, T.,Koshiba, T.,Liu, X.,Okada, H.,Tokunaga, T.,Kawabata, S.,Kimura, M.,Shimohigashi, Y.	Structural Evidence for Endocrine Disruptor Bisphenol A Binding to Human Nuclear Receptor ERR{gamma}	J.Biochem.(Tokyo)	2007	142	517	524
2E9L	Crystal Structure of human Cytosolic Neutral beta-Glycosylceramidase (Klotho-related Prote:KLrP) complex with Glucose and fatty acids	2007-01-25	2007-09-11	Hayashi, Y.,Okino, N.,Kakuta, Y.,Shikanai, T.,Tani, M.,Narimatsu, H.,Ito, M.	Klotho-related protein is a novel cytosolic neutral beta-glycosylceramidase	J.Biol.Chem.	2007	282	30889	30900
2E9M	Crystal Structure of human Cytosolic Neutral beta-Glycosylceramidase (Klotho-related Prote:KLrP) complex with Galactose and fatty acids	2007-01-25	2007-09-11	Hayashi, Y.,Okino, N.,Kakuta, Y.,Shikanai, T.,Tani, M.,Narimatsu, H.,Ito, M.	Klotho-related protein is a novel cytosolic neutral beta-glycosylceramidase	J.Biol.Chem.	2007	282	30889	30900
2E0P	The crystal structure of Cel44A	2006-10-11	2007-09-18	Kitago, Y.,Karita, S.,Watanabe, N.,Sakka, K.,Tanaka, I.	Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum	To be Published	0	0	0	0
2E3T	Crystal structure of rat xanthine oxidoreductase mutant (W335A and F336L)	2006-11-28	2007-09-25	Asai, R.,Nishino, T.,Matsumura, T.,Okamoto, K.,Igarashi, K.,Pai, E.F.	Two mutations convert mammalian xanthine oxidoreductase to highly superoxide-productive xanthine oxidase	J.Biochem.(Tokyo)	2007	141	525	534
2YV1	Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Methanocaldococcus jannaschii DSM 2661	2007-04-06	2007-10-09	Niwa, H.,Kuramitsu, S.,Yokoyama, S.	Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Methanocaldococcus jannaschii DSM 2661	To be Published	0	0	0	0
2Z8R	Crystal structure of rhamnogalacturonan lyase YesW at 1.40 A resolution	2007-09-10	2007-10-16	Ochiai, A.,Itoh, T.,Maruyama, Y.,Kawamata, A.,Mikami, B.,Hashimoto, W.,Murata, K.	A Novel Structural Fold in Polysaccharide Lyases: BACILLUS SUBTILIS FAMILY 11 RHAMNOGALACTURONAN LYASE YesW WITH AN EIGHT-BLADED -PROPELLER	J.Biol.Chem.	2007	282	37134	37145
2E0C	crystal structure of isocitrate dehydrogenase from Sulfolobus tokodaii strain7 at 2.0 A resolution	2006-10-06	2007-10-30	Kondo, H.,Murakami, M.,Ihara, K.,Kouyama, T.	crystal structure of isocitrate dehydrogenase from Sulfolobus tokodaii at 2.0 A resolution	To be Published	0	0	0	0
2Z8X	Crystal structure of extracellular lipase from Pseudomonas sp. MIS38	2007-09-11	2007-10-30	Angkawidjaja, C.,You, D.J.,Matsumura, H.,Kuwahara, K.,Koga, Y.,Takano, K.,Kanaya, S.	Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation	FEBS Lett.	2007	581	5060	5064
2Z8Z	Crystal structure of a platinum-bound S445C mutant of Pseudomonas sp. MIS38 lipase	2007-09-13	2007-10-30	Angkawidjaja, C.,You, D.J.,Matsumura, H.,Kuwahara, K.,Koga, Y.,Takano, K.,Kanaya, S.	Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation	FEBS Lett.	2007	581	5060	5064
2Z04	Crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit from Aquifex aeolicus	2007-05-06	2007-11-06	Okada, K.,Tamura, S.,Baba, S.,Kanagawa, M.,Kawai, G.,Sampei, G.	Crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit from Aquifex aeolicus	To be Published	0	0	0	0
2Z9U	Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti at 2.0 A resolution	2007-09-26	2007-11-06	Yoshikane, Y.,Yokochi, N.,Yamasaki, M.,Mizutani, K.,Ohnishi, K.,Mikami, B.,Hayashi, H.,Yagi, T.	Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099	J.Biol.Chem.	2008	283	1120	1127
2Z9V	Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxamine	2007-09-26	2007-11-06	Yoshikane, Y.,Yokochi, N.,Yamasaki, M.,Mizutani, K.,Ohnishi, K.,Mikami, B.,Hayashi, H.,Yagi, T.	Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099	J.Biol.Chem.	2008	283	1120	1127
2Z9W	Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxal	2007-09-26	2007-11-06	Yoshikane, Y.,Yokochi, N.,Yamasaki, M.,Mizutani, K.,Ohnishi, K.,Mikami, B.,Hayashi, H.,Yagi, T.	Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099	J.Biol.Chem.	2008	283	1120	1127
2Z9X	Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxyl-L-alanine	2007-09-26	2007-11-06	Yoshikane, Y.,Yokochi, N.,Yamasaki, M.,Mizutani, K.,Ohnishi, K.,Mikami, B.,Hayashi, H.,Yagi, T.	Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099	J.Biol.Chem.	2008	283	1120	1127
2OKX	Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A	2007-01-17	2007-11-13	Cui, Z.,Maruyama, Y.,Mikami, B.,Hashimoto, W.,Murata, K.	Crystal Structure of Glycoside Hydrolase Family 78 alpha-L-Rhamnosidase from Bacillus sp. GL1	J.Mol.Biol.	2007	374	384	398
2OKX	Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A	2007-01-17	2007-11-13	Cui, Z.,Maruyama, Y.,Mikami, B.,Hashimoto, W.,Murata, K.	Crystal Structure of Glycoside Hydrolase Family 78 alpha-L-Rhamnosidase from Bacillus sp. GL1	J.Mol.Biol.	2007	374	384	398
2Z1J	Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K/N143K/T145K)	2007-05-08	2007-11-13	You, D.-J.,Fukuchi, S.,Nishikawa, K.,Koga, Y.,Takano, K.,Kanaya, S.	Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues	J.Biochem.(Tokyo)	2007	142	507	516
2Z2X	Crystal structure of mature form of Tk-subtilisin	2007-05-29	2007-12-04	Tanaka, S.,Matsumura, H.,Koga, Y.,Takano, K.,Kanaya, S.	Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation	J.Mol.Biol.	2007	372	1055	1069
2Z2Y	Crystal structure of autoprocessed form of Tk-subtilisin	2007-05-29	2007-12-04	Tanaka, S.,Matsumura, H.,Koga, Y.,Takano, K.,Kanaya, S.	Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation	J.Mol.Biol.	2007	372	1055	1069
2Z2Z	Crystal structure of unautoprocessed form of Tk-subtilisin soaked by 10mM CaCl2	2007-05-29	2007-12-04	Tanaka, S.,Matsumura, H.,Koga, Y.,Takano, K.,Kanaya, S.	Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation	J.Mol.Biol.	2007	372	1055	1069
2Z30	Crystal structure of complex form between mat-Tk-subtilisin and Tk-propeptide	2007-05-29	2007-12-04	Tanaka, S.,Matsumura, H.,Koga, Y.,Takano, K.,Kanaya, S.	Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation	J.Mol.Biol.	2007	372	1055	1069
2ZA1	Crystal Structure of orotidine 5'-monophosphate decarboxylase complexed with orotidine 5'-monophosphate from P.falciparum	2007-09-26	2007-12-04	Tokuoka, K.,Kusakari, Y.,Krungkrai, S.R.,Matsumura, H.,Kai, Y.,Krungkrai, J.,Horii, T.,Inoue, T.	Structural Basis for the Decarboxylation of Orotidine 5'-Monophosphate (OMP) by Plasmodium Falciparum OMP Decarboxylase	J.BIOCHEM.(TOKYO)	2008	143	69	78
2ZA3	Crystal Structure of orotidine 5'-monophosphate decarboxylase complexed with uridine 5'-monophosphate from P.falciparum	2007-09-26	2007-12-04	Tokuoka, K.,Kusakari, Y.,Krungkrai, S.R.,Matsumura, H.,Kai, Y.,Krungkrai, J.,Horii, T.,Inoue, T.	Structural Basis for the Decarboxylation of Orotidine 5'-Monophosphate (OMP) by Plasmodium Falciparum OMP Decarboxylase	J.Biochem.(Tokyo)	2008	143	69	78
2E5B	Crystal structure of Human NMPRTase as free-form	2006-12-20	2007-12-25	Takahashi, R.,Nakamura, S.,Nakazawa, T.,Minoura, K.,Yoshida, T.,Nishi, Y.,Kobayashi, Y.,Ohkubo, T.	Reaction Mechanism of Human NMPRTase Elucidated from X-ray Crystallography and NMR Kinetic Analysis	To be Published	0	0	0	0
2E5C	Crystal structure of Human NMPRTase complexed with 5'-phosphoribosyl-1'-pyrophosphate	2006-12-20	2007-12-25	Takahashi, R.,Nakamura, S.,Nakazawa, T.,Minoura, K.,Yoshida, T.,Nishi, Y.,Kobayashi, Y.,Ohkubo, T.	Reaction Mechanism of Human NMPRTase Elucidated from X-ray Crystallography and NMR Kinetic Analysis	To be Published	0	0	0	0
2E5D	Crystal structure of Human NMPRTase complexed with nicotinamide	2006-12-20	2007-12-25	Takahashi, R.,Nakamura, S.,Nakazawa, T.,Minoura, K.,Yoshida, T.,Nishi, Y.,Kobayashi, Y.,Ohkubo, T.	Reaction Mechanism of Human NMPRTase Elucidated from X-ray Crystallography and NMR Kinetic Analysis	To be Published	0	0	0	0
2YXW	The deletion mutant of Multicopper Oxidase CueO	2007-04-27	2008-01-01	Kataoka, K.,Komori, H.,Ueki, Y.,Konno, Y.,Kamitaka, Y.,Kurose, S.,Tsujimura, S.,Higuchi, Y.,Kano, K.,Seo, D.,Sakurai, T.	Structure and function of the engineered multicopper oxidase CueO from Escherichia coli--deletion of the methionine-rich helical region covering the substrate-binding site	J.Mol.Biol.	2007	373	141	152
2Z57	Crystal structure of G56E-propeptide:S324A-subtilisin complex	2007-06-29	2008-01-01	Pulido, M.A.,Tanaka, S.,Sringiew, C.,You, D.J.,Matsumura, H.,Koga, Y.,Takano, K.,Kanaya, S.	Requirement of left-handed glycine residue for high stability of the Tk-subtilisin propeptide as revealed by mutational and crystallographic analyses	J.Mol.Biol.	2007	374	1359	1373
2E5M	Crystal structure of isocitrate dehydrogenase from Sulfolobus tokodaii strain 7	2006-12-22	2008-01-15	Kouyama, T.,Kondo, H.	Isocitrate dehydrogenase from Sulfolobus tokodaii strain 7	To be Published	0	0	0	0
2YRF	Crystal structure of 5-methylthioribose 1-phosphate isomerase from Bacillus subtilis complexed with sulfate ion	2007-04-02	2008-01-22	Tamura, H.,Saito, Y.,Ashida, H.,Inoue, T.,Kai, Y.,Yokota, A.,Matsumura, H.	Crystal structure of 5-methylthioribose 1-phosphate isomerase product complex from Bacillus subtilis: Implications for catalytic mechanism	Protein Sci.	2008	17	126	135
2ZBI	Crysatl structure of a bacterial cell-surface flagellin	2007-10-22	2008-02-05	Maruyama, Y.,Momma, M.,Mikami, B.,Hashimoto, W.,Murata, K.	Crystal structure of a novel bacterial cell-surface flagellin binding to a polysaccharide	Biochemistry	2008	47	1393	1402
2EA7	Crystal Structure of Adzuki Bean 7S Globulin-1	2007-01-30	2008-02-05	Fukuda, T.,Maruyama, N.,Mikami, B.,Utsumi, S.	Crystallization and Characterization of Recombinant 7S Globulins of Adzuki Bean and Structure-Function Relationships with 7S Globulins of Various Crops	To Be Published	0	0	0	0
2EAA	Crystal Structure of Adzuki Bean 7S Globulin-3	2007-01-31	2008-02-05	Fukuda, T.,Maruyama, N.,Mikami, B.,Utsumi, S.	Crystallization and Characterization of Recombinant 7S Globulins of Adzuki Bean and Structure-Function Relationships with 7S Globulins of Various Crops	To Be Published	0	0	0	0
2ZBL	Functional annotation of Salmonella enterica yihS-encoded protein	2007-10-24	2008-02-05	Itoh, T.,Mikami, B.,Hashimoto, W.,Murata, K.	Crystal structure of YihS in complex with D-mannose: structural annotation of Escherichia coli and Salmonella enterica yihS-encoded proteins to an aldose-ketose isomerase	J.Mol.Biol.	2008	377	1443	1459
2E8Y	Crystal structure of pullulanase type I from Bacillus subtilis str. 168	2007-01-24	2008-02-19	Malle, D.,Iwamoto, H.,Katsuya, Y.,Utsumi, S.,Mikami, B.	Crystal structure of pullulanase type I from Bacillus subtilis str. 168    in complex with maltose and alpha-cyclodextrin	To be Published	0	0	0	0
2E8Z	Crystal structure of pullulanase type I from Bacillus subtilis str. 168 complexed with alpha-cyclodextrin	2007-01-24	2008-02-19	Malle, D.,Iwamoto, H.,Katsuya, Y.,Utsumi, S.,Mikami, B.	Crystal structure of pullulanase type I from Bacillus subtilis str. 168 in complex with maltose and alpha-cyclodextrin	To be Published	0	0	0	0
2EF8	Crystal structure of C.EcoT38IS	2007-02-21	2008-02-26	Kawanishi, Y.,Mikami, B.,Kita, K.	Crystal structure of C.EcoT38IS	To be published	0	0	0	0
2YV0	Structural and Thermodynamic Analyses of E. coli ribonuclease HI Variant with Quintuple Thermostabilizing Mutations	2007-04-06	2008-03-18	Haruki, M.,Tanaka, M.,Motegi, T.,Tadokoro, T.,Koga, Y.,Takano, K.,Kanaya, S.	Structural and thermodynamic analyses of Escherichia coli RNase HI variant with quintuple thermostabilizing mutations.	Febs J.	2007	274	5815	5825
2Z4T	Crystal Structure of Vibrionaceae Photobacterium sp. JT-ISH-224 2,6-sialyltransferase in a Ternary Complex with Donor Product CMP and Accepter Substrate Lactose	2007-06-25	2008-04-08	Kakuta, Y.,Okino, N.,Kajiwara, H.,Ichikawa, M.,Takakura, Y.,Ito, M.,Yamamoto, T.	Crystal structure of Vibrionaceae Photobacterium sp. JT-ISH-224 alpha2,6-sialyltransferase in a ternary complex with donor product CMP and acceptor substrate lactose: catalytic mechanism and substrate recognition	Glycobiology	2008	18	66	73
2PJZ	The crystal structure of putative Cobalt transport ATP-binding protein (cbiO-2), ST1066	2007-04-17	2008-04-22	Hirata, K.,Hasegawa, K.,Ebihara, A.,Yamamoto, M.,Yokoyama, S.	The crystal structure of putative Cobalt transport ATP-binding protein (cbiO-2), ST1066	To be Published	0	0	0	0
2Z73	Crystal structure of squid rhodopsin	2007-08-13	2008-05-13	Murakami, M.,Kouyama, T.	Crystal structure of squid rhodopsin	Nature	2008	453	363	367
2ZCT	Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate	2007-11-12	2008-05-27	Nakamura, T.,Yamamoto, T.,Abe, M.,Matsumura, H.,Hagihara, Y.,Goto, T.,Yamaguchi, T.,Inoue, T.	Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate	Proc.Natl.Acad.Sci.Usa	2008	105	6238	6242
2Z42	Crystal Struture of Family 7 Alginate Lyase A1-II' from Sphingomonas sp. A1	2007-06-12	2008-05-27	Ogura, K.,Yamasaki, M.,Hashimoto, W.,Mikami, B.,Murata, K.	Substrate Recognition by Family 7 Alginagte Lyase from Sphingomonas sp. A1	To be published	0	0	0	0
2ZA9	Crystal Structure of Alginate lyase A1-II' N141C/N199C	2007-10-02	2008-05-27	Ogura, K.,Yamasaki, M.,Mikami, B.,Hashimoto, W.,Murata, K.	Substrate Recognition in Tunnel of Family 7 Alginate Lyase from Sphingomonas sp. A1	To be Published	0	0	0	0
2ZAA	Crystal Structure of Family 7 Alginate Lyase A1-II' H191N/Y284F in Complex with Substrate (GGMG)	2007-10-02	2008-05-27	Ogura, K.,Yamasaki, M.,Mikami, B.,Hashimoto, W.,Murata, K.	Substrate Recognition in Tunnel of Family 7 Alginate Lyase from Sphingomonas sp. A1	To be Published	0	0	0	0
2ZAC	Crystal Structure of Family 7 Alginate Lyase A1-II' Y284F in Complex with Product (MMG)	2007-10-02	2008-05-27	Ogura, K.,Yamasaki, M.,Mikami, B.,Hashimoto, W.,Murata, K.	Substrate Recognition in Tunnel of Family 7 Alginate Lyase from Sphingomonas sp. A1	To be Published	0	0	0	0
2ZAB	Crystal Structure of Family 7 Alginate Lyase A1-II' Y284F in Cmplex with Product (GGG)	2007-10-02	2008-05-27	Ogura, K.,Yamasaki, M.,Mikami, B.,Hashimoto, W.,Murata, K.	Substrate Recognition in Tunnel of Family 7 Alginate Lyase from Sphingomonas sp. A1	To be Published	0	0	0	0
2Z2T	Crystal structure of the complex between gp41 fragment N36 and fusion inhibitor SC34EK	2007-05-28	2008-06-03	Nishikawa, H.,Nakamura, S.,Kodama, E.,Ito, S.,Kajiwara, K.,Izumi, K.,Sakagami, Y.,Oishi, S.,Ohkubo, T.,Kobayashi, Y.,Fujii, N.,Matsuoka, M.	Intrahelical Salt-bridges in a-Helical Peptide Enhances its Binding to the Target: A New Design for HIV-1 Fusion Inhibitors	To be Published	0	0	0	0
2ZOY	The multi-drug binding transcriptional repressor CgmR (CGL2612 protein) from C.glutamicum	2008-06-20	2008-07-08	Itou, H.,Okada, U.,Suzuki, H.,Yao, M.,Wachi, M.,Watanabe, N.,Tanaka, I.	The CGL2612 protein from Corynebacterium glutamicum is a drug resistance-related transcriptional repressor: structural and functional analysis of a newly identified transcription factor from genomic DNA analysis	J.Biol.Chem.	2005	280	38711	38719
2ZBM	Crystal Structure of I115M Mutant Cold-Active Protein Tyrosine Phosphatase	2007-10-24	2008-07-29	Tsuruta, H.,Mikami, B.,Yamamoto, C.,Yamagata, H.	The role of group bulkiness in the catalytic activity of psychrophile cold-active protein tyrosine phosphatase	Febs J.	2008	275	4317	4328
2Z72	New Structure Of Cold-Active Protein Tyrosine Phosphatase At 1.1 Angstrom	2007-08-10	2008-07-29	Tsuruta, H.,Mikami, B.,Yamamoto, C.,Yamagata, H.	The role of group bulkiness in the catalytic activity of psychrophile cold-active protein tyrosine phosphatase	Febs J.	2008	275	4317	4328
2Z7C	Crystal structure of chromatin protein alba from hyperthermophilic archaeon pyrococcus horikoshii	2007-08-17	2008-08-05	Hada, K.,Nakashima, T.,Osawa, T.,Shimada, H.,Kakuta, Y.,Kimura, M.	Crystal structure and functional analysis of an archaeal chromatin protein Alba from the hyperthermophilic archaeon Pyrococcus horikoshii OT3.	Biosci.Biotechnol.Biochem.	2008	72	749	758
2ZPO	Crystal Structure of Green Turtle Egg White Ribonuclease	2008-07-25	2008-08-19	Katekaew, S.,Kakuta, Y.,Torikata, T.,Kimura, M.,Yoneda, K.,Araki, T.	Crystal Structure of Newly Found Green Turtle Egg White Ribonuclease	To be Published	0	0	0	0
2RGK	Functional annotation of Escherichia coli yihS-encoded protein	2007-10-03	2008-08-26	Itoh, T.,Mikami, B.,Hashimoto, W.,Murata, K.	Crystal structure of YihS in complex with D-mannose: structural annotation of Escherichia coli and Salmonella enterica yihS-encoded proteins to an aldose-ketose isomerase	J.Mol.Biol.	2008	377	1443	1459
2ZPY	Crystal structure of the mouse radxin FERM domain complexed with the mouse CD44 cytoplasmic peptide	2008-07-31	2008-08-26	Mori, T.,Kitano, K.,Terawaki, S.,Maesaki, R.,Fukami, Y.,Hakoshima, T.	Structural basis for CD44 recognition by ERM proteins	To Be Published	0	0	0	0
2Z6V	Crystal structure of sulfotransferase STF9 from Mycobacterium avium	2007-08-09	2008-09-09	Hassain, M.M.,Moriizumi, Y.,Tanaka, S.,Kimura, M.,Kakuta, Y.	Crystal structure of sulfotransferase STF9 from Mycobacterium avium	To be Published	0	0	0	0
2ZAE	Crystal structure of protein Ph1601p in complex with protein Ph1771p of archaeal ribonuclease P from Pyrococcus horikoshii OT3	2007-10-04	2008-10-14	Honda, T.,Kakuta, Y.,Kimura, K.,Saho, J.,Kimura, M.	Structure of an archaeal homolog of the human protein complex Rpp21-Rpp29 that is a key core component for the assembly of active ribonuclease P.	J.Mol.Biol.	0	0	0	0
2ZS0	Structural Basis for the Heterotropic and Homotropic Interactions of Invertebrate Giant Hemoglobin	2008-09-02	2008-10-21	Numoto, N.,Nakagawa, T.,Kita, A.,Sasayama, Y.,Fukumori, Y.,Miki, K.	Structural Basis for the Heterotropic and Homotropic Interactions of Invertebrate Giant Hemoglobin	Biochemistry	2008	47	11231	11238
2ZFE	Crystal structure of bacteriorhodopsin-xenon complex	2007-12-31	2008-11-11	Hayakawa, N.,Kasahara, T.,Hasegawa, D.,Yoshimura, K.,Murakami, M.,Kouyama, T.	Effect of Xenon Binding to a Hydrophobic Cavity on the Proton Pumping Cycle in Bacteriorhodopsin	J.Mol.Biol.	2008	0	0	0
2ZPT	Crystal structure of mouse sulfotransferase SULT1D1 complex with PAP	2008-07-28	2008-11-18	Teramoto, T.,Sakakibara, Y.,Inada, K.,Kurogi, K.,Liu, M.-C.,Suiko, M.,Kimura, M.,Kakuta, Y.	Crystal structure of mSULT1D1, a mouse catecholamine sulfotransferase	Febs Lett.	2008	0	0	0