PDB_ID	STRUCTURE TITLE	DEPOSITION DATE	RELEASE DATE	AUTHORS	TITLE	JOURNAL	YEAR	VOLUME	FIRST PAGE	LAST PAGE
1FVP	FLAVOPROTEIN 390	1995-07-07	1995-10-15	Kita, A.,Kasai, S.,Miyata, M.,Miki, K.	Structure of flavoprotein FP390 from a luminescent bacterium Photobacterium phosphoreum refined at 2.7 A resolution.	Acta Crystallogr.,Sect.D	1996	52	77	86
2HEB	CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY	1997-09-16	1998-01-28	Takano, K.,Funahashi, J.,Yamagata, Y.,Fujii, S.,Yutani, K.	Contribution of water molecules in the interior of a protein to the conformational stability.	J.Mol.Biol.	1997	274	132	142
1HJP	HOLLIDAY JUNCTION BINDING PROTEIN RUVA FROM E. COLI	1997-08-21	1998-02-25	Nishino, T.,Ariyoshi, M.,Iwasaki, H.,Shinagawa, H.,Morikawa, K.	Functional Analyses of the Domain Structure in the Holliday Junction Binding Protein Ruva	Structure	1998	6	11	21
2OCC	BOVINE HEART CYTOCHROME C OXIDASE AT THE FULLY OXIDIZED STATE	1998-05-26	1999-01-13	Yoshikawa, S.,Shinzawa-Itoh, K.,Nakashima, R.,Yaono, R.,Yamashita, E.,Inoue, N.,Yao, M.,Fei, M.J.,Libeu, C.P.,Mizushima, T.,Yamaguchi, H.,Tomizaki, T.,Tsukihara, T.	Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase.	Science	1998	280	1723	1729
1B5Y	CONTRIBUTION OF HYDROGEN BONDS TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME: CALORIMETRY AND X-RAY ANALYSIS OF SIX SER->ALA MUTANTS	1999-01-11	1999-01-20	Takano, K.,Yamagata, Y.,Kubota, M.,Funahashi, J.,Fujii, S.,Yutani, K.	Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six Ser --> Ala mutants.	Biochemistry	1999	38	6623	6629
1B7M	VERIFICATION OF SPMP USING MUTANT HUMAN LYSOZYMES	1999-01-24	1999-01-27	Takano, K.,Ota, M.,Ogasahara, K.,Yamagata, Y.,Nishikawa, K.,Yutani, K.	Experimental verification of the 'stability profile of mutant protein' (SPMP) data using mutant human lysozymes.	Protein Eng.	1999	12	663	672
1VFR	THE MAJOR NAD(P)H:FMN OXIDOREDUCTASE FROM VIBRIO FISCHERI	1998-01-09	1999-02-16	Koike, H.,Sasaki, H.,Kobori, T.,Zenno, S.,Saigo, K.,Murphy, M.E.,Adman, E.T.,Tanokura, M.	1.8 A crystal structure of the major NAD(P)H:FMN oxidoreductase of a bioluminescent bacterium, Vibrio fischeri: overall structure, cofactor and substrate-analog binding, and comparison with related flavoproteins.	J.Mol.Biol.	1998	280	259	273
1DPT	D-DOPACHROME TAUTOMERASE	1998-05-11	1999-03-30	Sugimoto, H.,Taniguchi, M.,Nakagawa, A.,Tanaka, I.,Suzuki, M.,Nishihira, J.	Crystal structure of human D-dopachrome tautomerase, a homologue of macrophage migration inhibitory factor, at 1.54 A resolution.	Biochemistry	1999	38	3268	3279
1KDJ	OXIDIZED FORM OF PLASTOCYANIN FROM DRYOPTERIS CRASSIRHIZOMA	1998-05-08	1999-05-11	Kohzuma, T.,Inoue, T.,Yoshizaki, F.,Sasakawa, Y.,Onodera, K.,Nagatomo, S.,Kitagawa, T.,Uzawa, S.,Isobe, Y.,Sugimura, Y.,Gotowda, M.,Kai, Y.	The structure and unusual pH dependence of plastocyanin from the fern Dryopteris crassirhizoma. The protonation of an active site histidine is hindered by pi-pi interactions.	J.Biol.Chem.	1999	274	11817	11823
7CEI	THE ENDONUCLEASE DOMAIN OF COLICIN E7 IN COMPLEX WITH ITS INHIBITOR IM7 PROTEIN	1998-09-17	1999-09-17	Ko, T.P.,Liao, C.C.,Ku, W.Y.,Chak, K.F.,Yuan, H.S.	The crystal structure of the DNase domain of colicin E7 in complex with its inhibitor Im7 protein.	Structure Fold.Des.	1999	7	91	102
1VSR	VERY SHORT PATCH REPAIR (VSR) ENDONUCLEASE FROM ESCHERICHIA COLI	1999-02-13	1999-10-27	Tsutakawa, S.E.,Muto, T.,Kawate, T.,Jingami, H.,Kunishima, N.,Ariyoshi, M.,Kohda, D.,Nakagawa, M.,Morikawa, K.	Crystallographic and functional studies of very short patch repair endonuclease.	Mol.Cell	1999	3	621	628
1QUV	CRYSTAL STRUCTURE OF THE RNA DIRECTED RNA POLYMERASE OF HEPATITIS C VIRUS	1999-07-04	1999-11-05	Ago, H.,Adachi, T.,Yoshida, A.,Yamamoto, M.,Habuka, N.,Yatsunami, K.,Miyano, M.	Crystal structure of the RNA-dependent RNA polymerase of hepatitis C virus.	Structure Fold.Des.	1999	7	1417	1426
456D	MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGMO6AATCCGCG): THE WATSON-CRICK TYPE N6-METHOXYADENOSINE/CYTIDINE BASE-PAIRS IN B-DNA	1999-03-06	2000-01-01	Chatake, T.,Ono, A.,Ueno, Y.,Matsuda, A.,Takenaka, A.	Crystallographic studies on damaged DNAs. I. An N(6)-methoxyadenine residue forms a Watson-Crick pair with a cytosine residue in a B-DNA duplex.	J.Mol.Biol.	1999	294	1215	1222
1DEJ	CRYSTAL STRUCTURE OF A DICTYOSTELIUM/TETRAHYMENA CHIMERA ACTIN (MUTANT 646: Q228K/T229A/A230Y/A231K/S232E/E360H) IN COMPLEX WITH HUMAN GELSOLIN SEGMENT 1	1999-11-15	2000-03-01	Matsuura, Y.,Stewart, M.,Kawamoto, M.,Kamiya, N.,Saeki, K.,Yasunaga, T.,Wakabayashi, T.	Structural basis for the higher Ca(2+)-activation of the regulated actin-activated myosin ATPase observed with Dictyostelium/Tetrahymena actin chimeras.	J.Mol.Biol.	2000	296	579	595
1C3A	CRYSTAL STRUCTURE OF FLAVOCETIN-A FROM THE HABU SNAKE VENOM, A NOVEL CYCLIC TETRAMER OF C-TYPE LECTIN-LIKE HETERODIMERS	1999-07-27	2000-03-06	Fukuda, K.,Mizuno, H.,Atoda, H.,Morita, T.	Crystal structure of flavocetin-A, a platelet glycoprotein Ib-binding protein, reveals a novel cyclic tetramer of C-type lectin-like heterodimers.	Biochemistry	2000	39	1915	1923
1PGR	2:2 COMPLEX OF G-CSF WITH ITS RECEPTOR	1999-03-08	2000-03-08	Aritomi, M.,Kunishima, N.,Okamoto, T.,Kuroki, R.,Ota, Y.,Morikawa, K.	Atomic structure of the GCSF-receptor complex showing a new cytokine-receptor recognition scheme.	Nature	1999	401	713	717
1POO	THERMOSTABLE PHYTASE FROM BACILLUS SP	1999-04-16	2000-04-19	Ha, N.C.,Oh, B.C.,Shin, S.,Kim, H.J.,Oh, T.K.,Kim, Y.O.,Choi, K.Y.,Oh, B.H.	Crystal structures of a novel, thermostable phytase in partially and fully calcium-loaded states.	Nat.Struct.Biol.	2000	7	147	153
1SMA	CRYSTAL STRUCTURE OF A MALTOGENIC AMYLASE	1999-04-21	2000-04-26	Kim, J.S.,Cha, S.S.,Kim, H.J.,Kim, T.J.,Ha, N.C.,Oh, S.T.,Cho, H.S.,Cho, M.J.,Kim, M.J.,Lee, H.S.,Kim, J.W.,Choi, K.Y.,Park, K.H.,Oh, B.H.	Crystal structure of a maltogenic amylase provides insights into a catalytic versatility.	J.Biol.Chem.	1999	274	26279	26286
1MR8	MIGRATION INHIBITORY FACTOR-RELATED PROTEIN 8 FROM HUMAN	1999-04-13	2000-05-17	Ishikawa, K.,Nakagawa, A.,Tanaka, I.,Suzuki, M.,Nishihira, J.	The structure of human MRP8, a member of the S100 calcium-binding protein family, by MAD phasing at 1.9 A resolution.	Acta Crystallogr.,Sect.D	2000	56	559	566
1QTO	1.5 A CRYSTAL STRUCTURE OF A BLEOMYCIN RESISTANCE DETERMINANT FROM BLEOMYCIN-PRODUCING STREPTOMYCES VERTICILLUS	1999-06-28	2000-06-28	Kawano, Y.,Kumagai, T.,Muta, K.,Matoba, Y.,Davies, J.,Sugiyama, M.	The 1.5 A crystal structure of a bleomycin resistance determinant from bleomycin-producing Streptomyces verticillus.	J.Mol.Biol.	2000	295	915	925
1C7Y	E.COLI RUVA-HOLLIDAY JUNCTION COMPLEX	2000-04-03	2000-07-21	Ariyoshi, M.,Nishino, T.,Iwasaki, H.,Shinagawa, H.,Morikawa, K.	Crystal structure of the holliday junction DNA in complex with a single RuvA tetramer.	Proc.Natl.Acad.Sci.USA	2000	97	8257	8262
1D2T	CRYSTAL STRUCTURE OF ACID PHOSPHATASE FROM ESCHERICHIA BLATTAE	1999-09-28	2000-12-06	Ishikawa, K.,Mihara, Y.,Gondoh, K.,Suzuki, E.,Asano, Y.	X-ray structures of a novel acid phosphatase from Escherichia blattae and its complex with the transition-state analog molybdate.	EMBO J.	2000	19	2412	2423
1G72	CATALYTIC MECHANISM OF QUINOPROTEIN METHANOL DEHYDROGENASE: A THEORETICAL AND X-RAY CRYSTALLOGRAPHIC INVESTIGATION	2000-11-08	2001-01-24	Zheng, Y.J.,Xia, Z.x.,Chen, Z.w.,Mathews, F.S.,Bruice, T.C.	Catalytic mechanism of quinoprotein methanol dehydrogenase: A theoretical and x-ray crystallographic investigation.	Proc.Natl.Acad.Sci.USA	2001	98	432	434
1G8N	MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG):5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNA	2000-11-20	2001-02-05	Tsunoda, M.,Karino, N.,Ueno, Y.,Matsuda, A.,Takenaka, A.	Crystallization and preliminary X-ray analysis of a DNA dodecamer containing 2'-deoxy-5-formyluridine; what is the role of magnesium cation in crystallization of Dickerson-type DNA dodecamers?	Acta Crystallogr.,Sect.D	2001	57	345	348
1G8V	MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG):5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNA	2000-11-21	2001-02-05	Tsunoda, M.,Karino, N.,Ueno, Y.,Matsuda, A.,Takenaka, A.	Crystallization and preliminary X-ray analysis of a DNA dodecamer containing 2'-deoxy-5-formyluridine; what is the role of magnesium cation in crystallization of Dickerson-type DNA dodecamers?	Acta Crystallogr.,Sect.D	2001	57	345	348
1GCZ	MACROPHAGE MIGRATION INHIBITORY FACTOR (MIF) COMPLEXED WITH INHIBITOR.	2000-08-24	2001-02-21	Orita, M.,Yamamoto, S.,Katayama, N.,Aoki, M.,Takayama, K.,Yamagiwa, Y.,Seki, N.,Suzuki, H.,Kurihara, H.,Sakashita, H.,Takeuchi, M.,Fujita, S.,Yamada, T.,Tanaka, A.	Coumarin and chromen-4-one analogues as tautomerase inhibitors of macrophage migration inhibitory factor: discovery and X-ray crystallography.	J.Med.Chem.	2001	44	540	547
1GD0	HUMAN MACROPHAGE MIGRATION INHIBITORY FACTOR (MIF)	2000-08-24	2001-02-21	Orita, M.,Yamamoto, S.,Katayama, N.,Aoki, M.,Takayama, K.,Yamagiwa, Y.,Seki, N.,Suzuki, H.,Kurihara, H.,Sakashita, H.,Takeuchi, M.,Fujita, S.,Yamada, T.,Tanaka, A.	Coumarin and chromen-4-one analogues as tautomerase inhibitors of macrophage migration inhibitory factor: discovery and X-ray crystallography.	J.Med.Chem.	2001	44	540	547
1EOI	CRYSTAL STRUCTURE OF ACID PHOSPHATASE FROM ESCHERICHIA BLATTAE COMPLEXED WITH THE TRANSITION STATE ANALOG MOLYBDATE	2000-03-23	2001-03-23	Ishikawa, K.,Mihara, Y.,Gondoh, K.,Suzuki, E.,Asano, Y.	X-ray structures of a novel acid phosphatase from Escherichia blattae and its complex with the transition-state analog molybdate.	EMBO J.	2000	19	2412	2423
1F75	CRYSTAL STRUCTURE OF UNDECAPRENYL DIPHOSPHATE SYNTHASE FROM MICROCOCCUS LUTEUS B-P 26	2000-06-26	2001-03-28	Fujihashi, M.,Zhang, Y.W.,Higuchi, Y.,Li, X.Y.,Koyama, T.,Miki, K.	Crystal structure of cis-prenyl chain elongating enzyme, undecaprenyl diphosphate synthase.	Proc.Natl.Acad.Sci.USA	2001	98	4337	4342
1G0D	CRYSTAL STRUCTURE OF RED SEA BREAM TRANSGLUTAMINASE	2000-10-06	2001-05-23	Noguchi, K.,Ishikawa, K.,Yokoyama, K.i.,Ohtsuka, T.,Nio, N.,Suzuki, E.	Crystal structure of red sea bream transglutaminase.	J.Biol.Chem.	2001	276	12055	12059
1F99	CRYSTAL STRUCTURE OF R-PHYCOCYANIN FROM POLYSIPHONIA AT 2.4 A RESOLUTION	2000-07-09	2001-07-09	Jiang, T.,Zhang, J.P.,Chang, W.R.,Liang, D.C.	Crystal structure of R-phycocyanin and possible energy transfer pathways in the phycobilisome.	Biophys.J.	2001	81	1171	1179
1I3T	MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATT(MO4)CGCG): THE WATSON-CRICK TYPE AND WOBBLE N4-METHOXYCYTIDINE/GUANOSINE BASE PAIRS IN B-DNA	2001-02-16	2001-09-14	Hossain, M.T.,Chatake, T.,Hikima, T.,Tsunoda, M.,Sunami, T.,Ueno, Y.,Matsuda, A.,Takenaka, A.	Crystallographic studies on damaged DNAs: III. N(4)-methoxycytosine can form both Watson-Crick type and wobbled base pairs in a B-form duplex.	J.Biochem.(Tokyo)	2001	130	9	12
1IQP	Crystal Structure of the Clamp Loader Small Subunit from Pyrococcus furiosus	2001-07-24	2001-09-19	Oyama, T.,Ishino, Y.,Cann, I.K.O.,Ishino, S.,Morikawa, K.	Atomic Structure of the Clamp Loader Small Subunit from Pyrococcus furiosus	Mol.Cell	2001	8	455	463
1IQ5	CALMODULIN/NEMATODE CA2+/CALMODULIN DEPENDENT KINASE KINASE FRAGMENT	2001-06-14	2001-09-26	Kurokawa, H.,Osawa, M.,Kurihara, H.,Katayama, N.,Tokumitsu, H.,Swindells, M.B.,Kainosho, M.,Ikura, M.	Target-induced conformational adaptation of calmodulin revealed by the crystal structure of a complex with nematode Ca(2+)/calmodulin-dependent kinase kinase peptide.	J.Mol.Biol.	2001	312	59	68
1IOK	CRYSTAL STRUCTURE OF CHAPERONIN-60 FROM PARACOCCUS DENITRIFICANS	2001-03-16	2001-10-03	Fukami, T.A.,Yohda, M.,Taguchi, H.,Yoshida, M.,Miki, K.	Crystal structure of chaperonin-60 from Paracoccus denitrificans.	J.Mol.Biol.	2001	312	501	509
1GEH	CRYSTAL STRUCTURE OF ARCHAEAL RUBISCO (RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE)	2000-11-13	2001-12-19	Kitano, K.,Maeda, N.,Fukui, T.,Atomi, H.,Imanaka, T.,Miki, K.	Crystal Structure of a Novel-Type Archaeal Rubisco with Pentagonal Symmetry	Structure	2001	9	473	481
1IQW	CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF THE MOUSE ANTI-HUMAN FAS ANTIBODY HFE7A	2001-08-10	2002-01-23	Ito, S.,Takayama, T.,Hanzawa, H.,Ichikawa, K.,Ohsumi, J.,Serizawa, N.,Hata, T.,Haruyama, H.	Crystal structure of the antigen-binding fragment of apoptosis-inducing mouse anti-human Fas monoclonal antibody HFE7A.	J.Biochem.(Tokyo)	2002	131	137	143
1GII	HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE CDK4 INHIBITOR	2001-02-06	2002-02-06	Ikuta, M.,Kamata, K.,Fukasawa, K.,Honma, T.,Machida, T.,Hirai, H.,Suzuki-Takahashi, I.,Hayama, T.,Nishimura, S.	Crystallographic approach to identification of cyclin-dependent kinase 4 (CDK4)-specific inhibitors by using CDK4 mimic CDK2 protein.	J.Biol.Chem.	2001	276	27548	27554
1GIJ	HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE CDK4 INHIBITOR	2001-02-06	2002-02-06	Ikuta, M.,Kamata, K.,Fukasawa, K.,Honma, T.,Machida, T.,Hirai, H.,Suzuki-Takahashi, I.,Hayama, T.,Nishimura, S.	Crystallographic approach to identification of cyclin-dependent kinase 4 (CDK4)-specific inhibitors by using CDK4 mimic CDK2 protein.	J.Biol.Chem.	2002	276	27548	27554
1JWF	Crystal Structure of human GGA1 VHS domain.	2001-09-04	2002-03-06	Shiba, T.,Takatsu, H.,Nogi, T.,Matsugaki, N.,Kawasaki, M.,Igarashi, N.,Suzuki, M.,Kato, R.,Earnest, T.,Nakayama, K.,Wakatsuki, S.	Structural basis for recognition of acidic-cluster dileucine sequence by GGA1.	Nature	2002	415	937	941
1ISF	Crystal Structure Analysis of BST-1/CD157	2001-12-05	2002-03-13	Yamamoto-Katayama, S.,Ariyoshi, M.,Ishihara, K.,Hirano, T.,Jingami, H.,Morikawa, K.	Crystallographic studies on human BST-1/CD157 with ADP-ribosyl cyclase and NAD glycohydrolase activities.	J.Mol.Biol.	2002	316	711	723
1IEI	CRYSTAL STRUCTURE OF HUMAN ALDOSE REDUCTASE COMPLEXED WITH THE INHIBITOR ZENARESTAT.	2001-04-09	2002-04-10	Kinoshita, T.,Miyake, H.,Fujii, T.,Takakura, S.,Goto, T.	The structure of human recombinant aldose reductase complexed with the potent inhibitor zenarestat.	Acta Crystallogr.,Sect.D	2002	58	622	626
1IU4	Crystal Structure Analysis of the Microbial Transglutaminase	2002-02-27	2002-08-27	Kashiwagi, T.,Yokoyama, K.,Ishikawa, K.,Ono, K.,Ejima, D.,Matsui, H.,Suzuki, E.	Crystal structure of microbial transglutaminase from Streptoverticillium mobaraense	J.Biol.Chem.	2002	277	44252	44260
1IW8	Crystal Structure of a mutant of acid phosphatase from Escherichia blattae (G74D/I153T)	2002-04-22	2002-09-11	Ishikawa, K.,Mihara, Y.,Shimba, N.,Ohtsu, N.,Kawasaki, H.,Suzuki, E.,Asano, Y.	Enhancement of nucleoside phosphorylation activity in an acid phosphatase	PROTEIN ENG.	2002	15	539	543
1ISQ	Pyrococcus furiosus PCNA complexed with RFCL PIP-box peptide	2001-12-19	2002-10-23	Matsumiya, S.,Ishino, S.,Ishino, Y.,Morikawa, K.	Physical interaction between proliferating cell nuclear antigen and replication factor C from Pyrococcus furiosus	Genes Cells	2002	7	911	922
1IYK	CRYSTAL STRUCTURE OF CANDIDA ALBICANS N-MYRISTOYLTRANSFERASE WITH MYRISTOYL-COA AND PEPTIDIC INHIBITOR	2002-08-29	2002-12-30	Sogabe, S.,Masubuchi, M.,Sakata, K.,Fukami, T.A.,Morikami, K.,Shiratori, Y.,Ebiike, H.,Kawasaki, K.,Aoki, Y.,Shimma, N.,D'Arcy, A.,Winkler, F.K.,Banner, D.W.,Ohtsuka, T.	Crystal Structures of Candida albicans N-Myristoyltransferase with Two Distinct Inhibitors	CHEM.BIOL.	2002	9	1119	1128
1IYL	Crystal Structure of Candida albicans N-myristoyltransferase with Non-peptidic Inhibitor	2002-08-29	2002-12-30	Sogabe, S.,Masubuchi, M.,Sakata, K.,Fukami, T.A.,Morikami, K.,Shiratori, Y.,Ebiike, H.,Kawasaki, K.,Aoki, Y.,Shimma, N.,D'Arcy, A.,Winkler, F.K.,Banner, D.W.,Ohtsuka, T.	Crystal Structures of Candida albicans N-Myristoyltransferase with Two Distinct Inhibitors	CHEM.BIOL.	2002	9	1119	1128
1I47	MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATT(MO4)CGCG): THE WATSON-CRICK TYPE AND WOBBLE N4-METHOXYCYTIDINE/GUANOSINE BASE PAIRS IN B-DNA	2001-02-20	2003-02-11	Hossain, M.T.,Chatake, T.,Hikima, T.,Tsunoda, M.,Sunami, T.,Ueno, Y.,Matsuda, A.,Takenaka, A.	Crystallographic studies on damaged DNAs: III. N(4)-methoxycytosine can form both Watson-Crick type and wobbled base pairs in a B-form duplex	J.Biochem.(Tokyo)	2001	130	9	12
1LHP	Crystal Structure of Pyridoxal Kinase from Sheep Brain	2002-04-17	2003-02-11	Li, M.H.,Kwok, F.,Chang, W.R.,Lau, C.K.,Zhang, J.P.,Lo, S.C.,Jiang, T.,Liang, D.C.	Crystal structure of brain pyridoxal kinase, a novel member of the ribokinase superfamily	J.BIOL.CHEM.	2002	277	46385	46390
1IT9	CRYSTAL STRUCTURE OF AN ANTIGEN-BINDING FRAGMENT FROM A HUMANIZED VERSION OF THE ANTI-HUMAN FAS ANTIBODY HFE7A	2002-01-11	2003-02-25	Haruyama, H.,Ito, S.,Miyadai, K.,Takahashi, T.,Kawaida, R.,Takayama, T.,Hanzawa, H.,Hata, T.,Yamaguchi, J.,Yoshida-Kato, H.,Ichikawa, K.,Ohsumi, J.,Yonehara, S.,Serizawa, N.	Humanization of the Mouse Anti-Fas Antibody HFE7A and Crystal Structure of the Humanized HFE7A Fab Fragment	BIOL.PHARM.BULL.	2002	25	1537	1545
1NP2	Crystal structure of thermostable beta-glycosidase from thermophilic eubacterium Thermus nonproteolyticus HG102	2003-01-16	2003-07-15	Wang, X.,He, X.,Yang, S.,An, X.,Chang, W.,Liang, D.	Structural Basis for Thermostability of beta-Glycosidase from the Thermophilic Eubacterium Thermus nonproteolyticus HG102.	J.Bacteriol.	2003	185	4248	4255
1UEX	Crystal structure of von Willebrand Factor A1 domain complexed with snake venom bitiscetin	2003-05-22	2003-09-30	Maita, N.,Nishio, K.,Nishimoto, E.,Matsui, T.,Shikamoto, Y.,Morita, T.,Sadler, J.E.,Mizuno, H.	Crystal structure of von Willebrand factor A1 domain complexed with snake venom, bitiscetin. Insight into glycoprotein Ibalpha binding mechanism induced by snake venom proteins.	J.Biol.Chem.	2003	278	37777	37781
1UF2	The Atomic Structure of Rice dwarf Virus (RDV)	2003-05-23	2003-10-14	Nakagawa, A.,Miyazaki, N.,Taka, J.,Naitow, H.,Ogawa, A.,Fujimoto, Z.,Mizuno, H.,Higashi, T.,Watanabe, Y.,Omura, T.,Cheng, R.H.,Tsukihara, T.	The atomic structure of rice dwarf virus reveals the self-assembly mechanism of component proteins.	Structure	2003	11	1227	1238
1KCB	Crystal Structure of a NO-forming Nitrite Reductase Mutant: an Analog of a Transition State in Enzymatic Reaction	2001-11-07	2003-11-04	Liu, S.Q.,Chang, T.,Liu, M.Y.,LeGall, J.,Chang, W.C.,Zhang, J.P.,Liang, D.C.,Chang, W.R.	Crystal structure of a NO-forming nitrite reductase mutant: an analog of a transition state in enzymatic reaction	BIOCHEM.BIOPHYS.RES.COMM.	2003	302	568	574
1JUV	Crystal structure analysis of Dihydrofolate reductase from Bacteriophage T4	2001-08-28	2003-12-23	Moon, J.H.,Oh, Y.K.,Lee, J.Y.,Suh, S.W.	Crystal structure analysis of Dihydrofolate reductase from Bacteriophage T4	To be Published	0	0	0	0
1J2T	Creatininase Mn	2003-01-11	2004-01-27	Yoshimoto, T.,Tanaka, N.,Kanada, N.,Inoue, T.,Nakajima, Y.,Haratake, M.,Nakamura, K.T.,Xu, Y.,Ito, K.	Crystal structures of creatininase reveal the substrate binding site and provide an insight into the catalytic mechanism	J.Mol.Biol.	2004	337	399	416
1J2U	Creatininase Zn	2003-01-11	2004-01-27	Yoshimoto, T.,Tanaka, N.,Kanada, N.,Inoue, T.,Nakajima, Y.,Haratake, M.,Nakamura, K.T.,Xu, Y.,Ito, K.	Crystal structures of creatininase reveal the substrate binding site and provide an insight into the catalytic mechanism	J.Mol.Biol.	2004	337	399	416
1UK0	Crystal structure of catalytic domain of human poly(ADP-ribose) polymerase with a novel inhibitor	2003-08-13	2004-01-27	Kinoshita, T.,Nakanishi, I.,Warizaya, M.,Iwashita, A.,Kido, Y.,Hattori, K.,Fujii, T.	Inhibitor-induced structural change of the active site of human poly(ADP-ribose) polymerase.	Febs Lett.	2004	556	43	46
1J1Q	Structure of Pokeweed Antiviral Protein from Seeds (PAP-S1)	2002-12-14	2004-02-03	Watanabe, K.,Sato, E.,Honjo, E.,Motoshima, H.,Kurokawa, H.,Mikami, B.,Monzingo, A.F.,Robertus, J.D.,Fujii, H.,Hidaka, A.	Crystal Structure of Pokweed Antiviral Protein from Seeds (PAP-S1) at 1.8 Angstrom Resolution	To be published	0	0	0	0
1J1R	Structure of Pokeweed Antiviral Protein from Seeds (PAP-S1) Complexed with Adenine	2002-12-14	2004-02-03	Watanabe, K.,Sato, E.,Honjo, E.,Motoshima, H.,Kurokawa, H.,Mikami, B.,Monzingo, A.F.,Robertus, J.D.,Fujii, H.,Hidaka, A.	Crystal Structure of Pokweed Antiviral Protein from Seeds (PAP-S1) at 1.8 Angstrom Resolution	To be published	0	0	0	0
1J1S	Pokeweed Antiviral Protein from Seeds (PAP-S1) Complexed with Formycin	2002-12-14	2004-02-03	Watanabe, K.,Sato, E.,Honjo, E.,Motoshima, H.,Kurokawa, H.,Mikami, B.,Monzingo, A.F.,Robertus, J.D.,Fujii, H.,Hidaka, A.	Crystal Structure of Pokweed Antiviral Protein from Seeds (PAP-S1) at 1.8 Angstrom Resolution	To be published	0	0	0	0
1V7N	Human Thrombopoietin Functional Domain Complexed To Neutralizing Antibody TN1 Fab	2003-12-18	2004-03-02	Feese, M.D.,Tamada, T.,Kato, Y.,Maeda, Y.,Hirose, M.,Matsukura, Y.,Shigematsu, H.,Muto, T.,Matsumoto, A.,Watarai, H.,Ogami, K.,Tahara, T.,Kato, T.,Miyazaki, H.,Kuroki, R.	Structure of the receptor-binding domain of human thrombopoietin determined by complexation with a neutralizing antibody fragment	Proc.Natl.Acad.Sci.USA	2004	101	1816	1821
1RWT	Crystal Structure of Spinach Major Light-harvesting complex at 2.72 Angstrom Resolution	2003-12-17	2004-03-30	Liu, Z.,Yan, H.,Wang, K.,Kuang, T.,Zhang, J.,Gui, L.,An, X.,Chang, W.	Crystal structure of spinach major light-harvesting complex at 2.72 A resolution	Nature	2004	428	287	292
1RZP	Crystal Structure of C-Terminal Despentapeptide Nitrite Reductase from Achromobacter Cycloclastes at pH6.2	2003-12-26	2004-03-30	Li, H.T.,Wang, C.,Chang, T.,Chang, W.C.,Liu, M.Y.,Le Gall, J.,Gui, L.L.,Zhang, J.P.,An, X.M.,Chang, W.R.	pH-profile crystal structure studies of C-terminal despentapeptide nitrite reductase from Achromobacter cycloclastes	BIOCHEM.BIOPHYS.RES.COMM.	2004	316	107	113
1V4S	Crystal structure of human glucokinase	2003-11-19	2004-03-30	Kamata, K.,Mitsuya, M.,Nishimura, T.,Eiki, J.,Nagata, Y.	Structural basis for allosteric regulation of the monomeric allosteric enzyme human glucokinase	Structure	2004	12	429	438
1V6W	Crystal Structure Of Xylanase From Streptomyces Olivaceoviridis E-86 Complexed With 2(2)-4-O-methyl-alpha-D-glucuronosyl-xylobiose	2003-12-04	2004-04-27	Fujimoto, Z.,Kaneko, S.,Kuno, A.,Kobayashi, H.,Kusakabe, I.,Mizuno, H.	Crystal structures of decorated xylooligosaccharides bound to a family 10 xylanase from Streptomyces olivaceoviridis E-86	J.Biol.Chem.	2004	279	9606	9614
1RFJ	Crystal Structure of Potato Calmodulin PCM6	2003-11-10	2004-06-29	Yun, C.H.,Bai, J.,Sun, D.Y.,Cui, D.F.,Chang, W.R.,Liang, D.C.	Structure of potato calmodulin PCM6: the first report of the three-dimensional structure of a plant calmodulin.	Acta Crystallogr.,Sect.D	2004	60	1214	1219
1VZZ	CRYSTAL STRUCTURE OF MUTANT ENZYME Y32F/D103L OF KETOSTEROID ISOMERASE FROM PSEUDOMONAS PUTIDA BIOTYPE B	2004-05-30	2004-07-08	Jang, D.S.,Cha, H.J.,Cha, S.S.,Hong, B.H.,Ha, N.C.,Lee, J.Y.,Oh, B.H.,Lee, H.S.,Choi, K.Y.	Structural double-mutant cycle analysis of a hydrogen bond network in ketosteroid isomerase from Pseudomonas putida biotype B.	Biochem.J.	2004	382	967	973
1WDU	Endonuclease domain of TRAS1, a telomere-specific non-LTR retrotransposon	2004-05-17	2004-08-10	Maita, N.,Anzai, T.,Aoyagi, H.,Mizuno, H.,Fujiwara, H.	Crystal structure of the endonuclease domain encoded by the telomere-specific long interspersed nuclear element, TRAS1	J.Biol.Chem.	2004	279	41067	41076
1UK1	Crystal structure of human poly(ADP-ribose) polymerase complexed with a potent inhibitor	2003-08-14	2004-09-14	Hattori, K.,Kido, Y.,Yamamoto, H.,Ishida, J.,Kamijo, K.,Murano, K.,Ohkubo, M.,Kinoshita, T.,Iwashita, A.,Mihara, K.,Yamazaki, S.,Matsuoka, N.,Teramura, Y.,Miyake, H.	Rational approaches to discovery of orally active and brain-penetrable quinazolinone inhibitors of poly(ADP-ribose)polymerase	J.Med.Chem.	2004	47	4151	4154
1TGR	Crystal Structure of mini-IGF-1(2)	2004-05-29	2004-12-28	Yun, C.H.,Tang, Y.H.,Feng, Y.M.,An, X.M.,Chang, W.R.,Liang, D.C.	1.42A crystal structure of mini-IGF-1(2): an analysis of the disulfide isomerization property and receptor binding property of IGF-1 based on the three-dimensional structure	Biochem.Biophys.Res.Commun.	2004	326	52	59
1XD6	Crystal structures of novel monomeric monocot mannose-binding lectins from Gastrodia elata	2004-09-04	2005-01-11	Liu, W.,Yang, N.,Ding, J.,Huang, R.H.,Hu, Z.,Wang, D.C.	Structural Mechanism Governing the Quaternary Organization of Monocot Mannose-binding Lectin Revealed by the Novel Monomeric Structure of an Orchid Lectin	J.Biol.Chem.	2005	280	14865	14876
1V5Y	Binding of coumarins to NAD(P)H:FMN oxidoreductase	2003-11-26	2005-03-08	Kobori, T.,Koike, H.,Sasaki, H.,Zenno, S.,Saigo, K.,Tanokura, M.	Binding of coumarins to NAD(P)H:FMN oxidoreductase	To be Published	0	0	0	0
1V5Z	Binding of coumarins to NAD(P)H:FMN oxidoreductase	2003-11-26	2005-03-08	Kobori, T.,Koike, H.,Sasaki, H.,Zenno, S.,Saigo, K.,Tanokura, M.	Binding of coumarins to NAD(P)H:FMN oxidoreductase	To be Published	0	0	0	0
1SQW	Crystal structure of KD93, a novel protein expressed in the human pro	2004-03-19	2005-03-22	Liu, J.F.,Wang, X.Q.,Wang, Z.X.,Chen, J.R.,Jiang, T.,An, X.M.,Chang, W.R.,Liang, D.C.	Crystal structure of KD93, a novel protein expressed in human hematopoietic stem/progenitor cells.	J.Struct.Biol.	2004	148	370	374
1YM0	Crystal Structure of Earthworm Fibrinolytic Enzyme Component B: a Novel, Glycosylated Two-chained Trypsin	2005-01-20	2005-04-19	Wang, F.,Wang, C.,Li, M.,Zhang, J.P.,Gui, L.L.,An, X.M.,Chang, W.R.	Crystal structure of earthworm fibrinolytic enzyme component B: a novel, glycosylated two-chained trypsin.	J.Mol.Biol.	2005	348	671	685
1W00	CRYSTAL STRUCTURE OF MUTANT ENZYME D103L OF KETOSTEROID ISOMERASE FROM PSEUDOMONAS PUTIDA BIOTYPE B	2004-05-30	2005-05-26	Jang, D.S.,Cha, H.J.,Cha, S.S.,Hong, B.H.,Ha, N.C.,Lee, J.Y.,Oh, B.H.,Lee, H.S.,Choi, K.Y.	Structural double-mutant cycle analysis of a hydrogen bond network in ketosteroid isomerase from Pseudomonas putida biotype B.	Biochem.J.	2004	382	967	973
1ZJ6	Crystal structure of human ARL5	2005-04-28	2005-06-07	Wang, Z.X.,Shi, L.,Liu, J.F.,An, X.M.,Chang, W.R.,Liang, D.C.	2.0A crystal structure of human ARL5-GDP3'P, a novel member of the small GTP-binding proteins	Biochem.Biophys.Res.Commun.	2005	332	640	645
1YXK	Crystal structure of human lectin-like oxidized low-density lipoprotein receptor 1 (LOX-1) disulfide-linked dimer	2005-02-22	2005-06-14	Ohki, I.,Ishigaki, T.,Oyama, T.,Matsunaga, S.,Xie, Q.,Ohnishi-Kameyama, M.,Murata, T.,Tsuchiya, D.,Machida, S.,Morikawa, K.,Tate, S.	Crystal structure of human lectin-like, oxidized low-density lipoprotein receptor 1 ligand binding domain and its ligand recognition mode to OxLDL.	Structure	2005	13	905	917
1WQV	Human Factor Viia-Tissue Factor Complexed with propylsulfonamide-D-Thr-Met-p-aminobenzamidine	2004-10-02	2005-10-02	Kadono, S.,Sakamoto, A.,Kikuchi, Y.,Oh-eda, M.,Yabuta, N.,Koga, T.,Hattori, K.,Shiraishi, T.,Haramura, M.,Kodama, H.,Esaki, T.,Sato, H.,Watanabe, Y.,Itoh, S.,Ohta, M.,Kozono, T.	Crystal structure of human factor VIIa/tissue factor in complex with peptide mimetic inhibitor	Biochem.Biophys.Res.Commun.	2004	324	1227	1233
2AO5	Crystal structure of an RNA duplex r(GGCGBrUGCGCU)2 with terminal and internal tandem G-U base pairs	2005-08-12	2006-03-28	Utsunomiya, R.,Suto, K.,Balasundaresan, D.,Fukamizu, A.,Kumar, P.K.,Mizuno, H.	Structure of an RNA duplex r(GGCGBrUGCGCU)2 with terminal and internal tandem G.U base pairs.	Acta Crystallogr.,Sect.D	2006	62	331	338
2CFM	ATP-DEPENDENT DNA LIGASE FROM PYROCOCCUS FURIOSUS	2006-02-22	2006-07-12	Nishida, H.,Kiyonari, S.,Ishino, Y.,Morikawa, K.	The closed structure of an archaeal DNA ligase from Pyrococcus furiosus.	J.Mol.Biol.	2006	360	956	967
2FB9	Crystal structure of the Apo form of D-alanine: D-alanine ligase (Ddl) from Thermus caldophilus: a basis for the substrate-induced conformational changes	2005-12-08	2006-08-29	Lee, J.H.,Na, Y.,Song, H.E.,Kim, D.,Park, B.H.,Rho, S.H.,Im, Y.J.,Kim, M.K.,Kang, G.B.,Lee, D.S.,Eom, S.H.	Crystal structure of the apo form of D-alanine: D-alanine ligase (Ddl) from Thermus caldophilus: A basis for the substrate-induced conformational changes	Proteins	2006	64	1078	1082
2BC1	Structural Analysis of Streptococcus pyogenes NADH oxidase: C44S Nox	2005-10-18	2006-10-31	Mallett, T.C.,Sakai, H.,Okuno, T.,Parsonage, D.,Boles, W.H.,Tsukihara, T.,Claiborne, A.	Structural Analysis of Streptococcus pyogenes NADH Oxidase: Conformational dynamics involved in formation of the C(4a)-peroxyflavin intermediate	To be Published	0	0	0	0
2BCP	Structural Analysis of Streptococcus pyogenes NADH oxidase: C44S Nox with Azide	2005-10-19	2006-10-31	Mallett, T.C.,Sakai, H.,Okuno, T.,Parsonage, D.,Boles, W.H.,Tsukihara, T.,Claiborne, A.	Structural Analysis of Streptococcus pyogenes NADH Oxidase: Conformational dynamics involved in formation of the C(4a)-peroxyflavin intermediate	To be Published	0	0	0	0
2DDB	Crystal structure of pseudecin from Pseudechis porphyriacus	2006-01-25	2007-01-30	Suzuki, N.,Yamazaki, Y.,Fujimoto, Z.,Morita, T.,Mizuno, H.	Crystal Structure of snake venom CRISPs that target cyclic nucleotide-gated ion channels	To be Published	0	0	0	0
2EGO	Crystal Structure of Tamalin PDZ Domain	2007-03-01	2007-05-01	Sugi, T.,Oyama, T.,Muto, T.,Nakanishi, S.,Morikawa, K.,Jingami, H.	Crystal structures of autoinhibitory PDZ domain of Tamalin: implications for metabotropic glutamate receptor trafficking regulation	Embo J.	2007	26	2192	2205
2DS1	Human cyclin dependent kinase 2 complexed with the CDK4 inhibitor	2006-06-17	2007-06-19	Kawanishi, N.,Sugimoto, T.,Shibata, J.,Nakamura, K.,Masutani, K.,Ikuta, M.,Hirai, H.	Structure-based drug design of a highly potent CDK1,2,4,6 inhibitor with novel macrocyclic quinoxalin-2-one structure	Bioorg.Med.Chem.Lett.	2006	16	5122	5126
2ZP0	Human factor viia-tissue factor complexed with benzylsulfonamide-D-ile-gln-P-aminobenzamidine	2008-06-20	2008-07-15	Kadono, S.,Sakamoto, A.,Kikuchi, Y.,Oh-eda, M.,Yabuta, N.,Koga, T.,Hattori, K.,Shiraishi, T.,Haramura, M.,Kodama, H.,Esaki, T.,Sato, H.,Watanabe, S.,Itoh, S.,Ohta, M.,Kozono, T.	Peptide Mimetic Factor VIIa Inhibitor: Importance of Hydrophilic Pocket in S2 Site to Improve Selectivity aganist Thrombin	LETT.DRUG DES.DISCOVERY	2005	2	177	181
2Z8C	Phosphorylated insulin receptor tyrosine kinase in complex with (4-{[5-carbamoyl-4-(3-methylanilino)pyrimidin-2-yl]amino}phenyl)acetic acid	2007-09-05	2008-08-12	Katayama, N.,Orita, M.,Yamaguchi, T.,Hisamichi, H.,Kuromitsu, S.,Kurihara, H.,Sakashita, H.,Matsumoto, Y.,Fujita, S.,Niimi, T.	Identification of a key element for hydrogen-bonding patterns between protein kinases and their inhibitors.	Proteins	2008	73	795	801
2ZB2	Human liver glycogen phosphorylase a complexed with glcose and 5-chloro-N-[4-(1,2-dihydroxyethyl)phenyl]-1H-indole-2-carboxamide	2007-10-15	2008-09-02	Onda, K.,Suzuki, T.,Shiraki, R.,Yonetoku, Y.,Negoro, K.,Momose, K.,Katayama, N.,Orita, M.,Yamaguchi, T.,Ohta, M.,Tsukamoto, S.	Synthesis of 5-chloro-N-aryl-1H-indole-2-carboxamide derivatives as inhibitors of human liver glycogen phosphorylase a.	Bioorg.Med.Chem.	2008	16	5452	5464