PDB_ID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 2QUN Crystal Structure of D-tagatose 3-epimerase from Pseudomonas cichorii in Complex with D-fructose 2007-08-06 2007-12-25 Yoshida, H.,Yamada, M.,Nishitani, T.,Takada, G.,Izumori, K.,Kamitori, S. Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose J.Mol.Biol. 2007 374 443 453 2QUL Crystal structure of D-tagatose 3-epimerase from Pseudomonas cichorii at 1.79 A resolution 2007-08-06 2007-12-25 Yoshida, H.,Yamada, M.,Nishitani, T.,Takada, G.,Izumori, K.,Kamitori, S. Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose J.Mol.Biol. 2007 374 443 453 2Z8D The galacto-N-biose-/lacto-N-biose I-binding protein (GL-BP) of the ABC transporter from Bifidobacterium longum in complex with lacto-N-biose 2007-09-05 2008-03-18 Suzuki, R.,Wada, J.,Katayama, T.,Fushinobu, S.,Wakagi, T.,Shoun, H.,Sugimoto, H.,Tanaka, A.,Kumagai, H.,Ashida, H.,Kitaoka, M.,Yamamoto, K. Structural and thermodynamic analyses of solute-binding Protein from Bifidobacterium longum specific for core 1 disaccharide and lacto-N-biose I. J.Biol.Chem. 2008 283 13165 13173 2Z8E The galacto-N-biose-/lacto-N-biose I-binding protein (GL-BP) of the ABC transporter from Bifidobacterium longum in complex with galacto-N-biose 2007-09-05 2008-03-18 Suzuki, R.,Wada, J.,Katayama, T.,Fushinobu, S.,Wakagi, T.,Shoun, H.,Sugimoto, H.,Tanaka, A.,Kumagai, H.,Ashida, H.,Kitaoka, M.,Yamamoto, K. Structural and thermodynamic analyses of solute-binding Protein from Bifidobacterium longum specific for core 1 disaccharide and lacto-N-biose I. J.Biol.Chem. 2008 283 13165 13173 2Z8F The galacto-N-biose-/lacto-N-biose I-binding protein (GL-BP) of the ABC transporter from Bifidobacterium longum in complex with lacto-N-tetraose 2007-09-05 2008-03-18 Suzuki, R.,Wada, J.,Katayama, T.,Fushinobu, S.,Wakagi, T.,Shoun, H.,Sugimoto, H.,Tanaka, A.,Kumagai, H.,Ashida, H.,Kitaoka, M.,Yamamoto, K. Structural and thermodynamic analyses of solute-binding Protein from Bifidobacterium longum specific for core 1 disaccharide and lacto-N-biose I. J.Biol.Chem. 2008 283 13165 13173 2PVP Crystal structure of D-Alanine-D-Alanine Ligase from Helicobacter pylori 2007-05-10 2008-04-01 Wu, D.,Zhang, L.,Kong, Y.,Du, J.,Chen, S.,Chen, J.,Ding, J.,Jiang, H.,Shen, X. Enzymatic characterization and crystal structure analysis of the D-alanine-D-alanine ligase from Helicobacter pylori Proteins 2008 72 1148 1160 2ZCZ Crytal structures and thermostability of mutant TRAP3 A7 (ENGINEERED TRAP) 2007-11-15 2008-04-29 Watanabe, M.,Mishima, Y.,Yamashita, I.,Park, S.Y.,Tame, J.R.,Heddle, J.G. Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP. Protein Sci. 2008 17 518 526 2Z0Q Crystal structure of DH-PH domain of RhoGEF3(Xpln) 2007-05-07 2008-05-13 Murayama, K.,Kato-Murayama, M.,Terada, T.,Shirouzu, M.,Yokoyama, S. Crystal structure of DH-PH domain of RhoGEF3(Xpln) To be Published 0 0 0 0 3BM4 Crystal Structure of Human ADP-ribose Pyrophosphatase NUDT5 In complex with magnesium and AMPcpr 2007-12-12 2008-05-20 Zha, M.,Guo, Q.,Zhang, Y.,Yu, B.,Ou, Y.,Zhong, C.,Ding, J. Molecular Mechanism of ADP-Ribose Hydrolysis By Human NUDT5 From Structural and Kinetic Studies J.Mol.Biol. 2008 379 568 578 3CTZ Structure of human cytosolic X-prolyl aminopeptidase 2008-04-15 2008-05-27 Li, X.,Lou, Z.,Rao, Z. Structure of human cytosolic X-prolyl aminopeptidase To be Published 0 0 0 0 2ZEA Crystal structure of Alcaligenes faecalis D-3-hydroxybutyrate dehydrogenase in complex with NAD+ and acetate 2007-12-07 2008-06-03 Hoque, M.M.,Shimizu, S.,Hossain, M.T.,Yamamoto, T.,Imamura, S.,Suzuki, K.,Tsunoda, M.,Amano, H.,Sekiguchi, T.,Takenaka, A. The structures of Alcaligenes faecalisD-3-hydroxybutyrate dehydrogenase before and after NAD(+) and acetate binding suggest a dynamical reaction mechanism as a member of the SDR family. Acta Crystallogr.,Sect.D 2008 64 496 505 3C67 Escherichia coli K12 YgjK in a complexed with glucose 2008-02-04 2008-06-10 Kurakata, Y.,Uechi, A.,Yoshida, H.,Kamitori, S.,Sakano, Y.,Nishikawa, A.,Tonozuka, T. Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63. J.Mol.Biol. 2008 381 116 128 3C68 Escherichia coli K12 YgjK in a complexed with mannose 2008-02-04 2008-06-10 Kurakata, Y.,Uechi, A.,Yoshida, H.,Kamitori, S.,Sakano, Y.,Nishikawa, A.,Tonozuka, T. Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63. J.Mol.Biol. 2008 381 116 128 3DEI Crystal Structures of Caspase-3 with Bound Isoquinoline-1,3,4-trione Derivative Inhibitors 2008-06-10 2008-09-02 Du, J.-Q.,Wu, J.,Zhang, H.-J.,Zhang, Y.-H.,Qiu, B.-Y.,Wu, F.,Chen, Y.-H.,Li, J.-Y.,Nan, F.-J.,Ding, J.-P.,Li, J. Isoquinoline-1,3,4-trione Derivatives Inactivate Caspase-3 by Generation of Reactive Oxygen Species J.Biol.Chem. 2008 283 30205 30215 3DEJ Crystal Structures of Caspase-3 with Bound Isoquinoline-1,3,4-trione Derivative Inhibitors 2008-06-10 2008-09-02 Du, J.-Q.,Wu, J.,Zhang, H.-J.,Zhang, Y.-H.,Qiu, B.-Y.,Wu, F.,Chen, Y.-H.,Li, J.-Y.,Nan, F.-J.,Ding, J.-P.,Li, J. Isoquinoline-1,3,4-trione Derivatives Inactivate Caspase-3 by Generation of Reactive Oxygen Species J.Biol.Chem. 2008 283 30205 30215 3DEH Crystal Structures of Caspase-3 with Bound Isoquinoline-1,3,4-trione Derivative Inhibitors 2008-06-10 2008-09-02 Du, J.-Q.,Wu, J.,Zhang, H.-J.,Zhang, Y.-H.,Qiu, B.-Y.,Wu, F.,Chen, Y.-H.,Li, J.-Y.,Nan, F.-J.,Ding, J.-P.,Li, J. Isoquinoline-1,3,4-trione Derivatives Inactivate Caspase-3 by Generation of Reactive Oxygen Species J.Biol.Chem. 2008 283 30205 30215 3DEK Crystal Structures of Caspase-3 with Bound Isoquinoline-1,3,4-trione Derivative Inhibitors 2008-06-10 2008-09-02 Du, J.-Q.,Wu, J.,Zhang, H.-J.,Zhang, Y.-H.,Qiu, B.-Y.,Wu, F.,Chen, Y.-H.,Li, J.-Y.,Nan, F.-J.,Ding, J.-P.,Li, J. Isoquinoline-1,3,4-trione Derivatives Inactivate Caspase-3 by Generation of Reactive Oxygen Species J.Biol.Chem. 2008 283 30205 30215 2ZND Crystal structure of Ca2+-free form of des3-20ALG-2 2008-04-22 2008-09-09 Suzuki, H.,Kawasaki, M.,Inuzuka, T.,Okumura, M.,Kakiuchi, T.,Shibata, H.,Wakatsuki, S.,Maki, M. Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism Structure 2008 16 1562 1573 2ZOT Crystal struture of human F-spondin reeler domain (fragment 1) 2008-06-07 2008-10-14 Nagae, M.,Nishikawa, K.,Yasui, N.,Yamasaki, M.,Nogi, T.,Takagi, J. Structure of the F-spondin reeler domain reveals a unique beta-sandwich fold with a deformable disulfide-bonded loop Acta Crystallogr.,Sect.D 2008 64 1138 1145 3E9G Crystal structure long-form (residue1-124) of Eaf3 chromo domain 2008-08-22 2008-11-04 Sun, B.,Hong, J.,Zhang, P.,Lin, D.,Ding, J. Molecular basis of the interaction of Saccharomyce scerevisiae Eaf3 chromo domain with methylated H3K36 to be published 0 0 0 0 3BLE Crystal structure of the catalytic domain of LiCMS in complexed with malonate 2007-12-11 2008-11-11 Ma, J.,Zhang, P.,Zhang, Z.,Zha, M.,Xu, H.,Zhao, G.,Ding, J. Molecular basis of the substrate specificity and the catalytic mechanism of citramalate synthase from Leptospira interrogans Biochem.J. 2008 415 45 56