PDB_ID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 1TQ8 Crystal Structure of protein Rv1636 from Mycobacterium tuberculosis H37Rv 2004-06-16 2004-06-29 RAJASHANKAR, K.R.,KNIEWEL, R.,SOLORZANO, V.,LIMA, C.D. Crystal Structure of hypothetical protein Rv1636 from Mycobacterium tuberculosis H37Rv To be Published 0 0 0 0 1U02 Crystal structure of trehalose-6-phosphate phosphatase related protein 2004-07-12 2004-07-20 Rao, K.N.,Kumaran, D.,Seetharaman, J.,Bonanno, J.B.,Burley, S.K.,Swaminathan, S. Crystal structure of trehalose-6-phosphate phosphatase-related protein: biochemical and biological implications. Protein Sci. 2006 15 1735 1744 1XD7 Crsytal structure of a putative DNA binding protein 2004-09-04 2004-09-21 Agarwal, R.,Swaminathan, S. Crystal structure of a putative DNA binding protein To be Published 0 0 0 0 1XM5 Crystal structure of metal-dependent hydrolase ybeY from E. coli, Pfam UPF0054 2004-10-01 2004-10-12 Zhan, C.,Fedorov, E.V.,Shi, W.,Ramagopal, U.A.,Thirumuruhan, R.,Manjasetty, B.A.,Almo, S.C.,Fiser, A.,Chance, M.R.,Fedorov, A.A. The ybeY protein from Escherichia coli is a metalloprotein. Acta Crystallogr.,Sect.F 2005 61 959 963 1XM5 Crystal structure of metal-dependent hydrolase ybeY from E. coli, Pfam UPF0054 2004-10-01 2004-10-12 Zhan, C.,Fedorov, E.V.,Shi, W.,Ramagopal, U.A.,Thirumuruhan, R.,Manjasetty, B.A.,Almo, S.C.,Fiser, A.,Chance, M.R.,Fedorov, A.A. The ybeY protein from Escherichia coli is a metalloprotein. Acta Crystallogr.,Sect.F 2005 61 959 963 1TWY Crystal structure of an ABC-type phosphate transport receptor from Vibrio cholerae 2004-07-01 2004-12-21 Ramagopal, U.A.,Patskovsky, Y.,Almo, S.C. Crystal structure of hypothetical ABC-type phosphate transporter To be Published 0 0 0 0 1Y8C Crystal structure of a S-adenosylmethionine-dependent methyltransferase from Clostridium acetobutylicum ATCC 824 2004-12-11 2004-12-28 Rajashankar, K.R.,Kniewel, R.,Lee, K.,Lima, C.D. Crystal structure of a S-adenosylmethionine-dependent methyltransferase from Clostridium acetobutylicum ATCC 824 To be Published 0 0 0 0 1Y7E The Crystal Structure of Aminopeptidase I from Borrelia burgdorferi B31 2004-12-08 2005-01-04 Min, T.,Gorman, J.,Shapiro, L. The crystal structure of aminopeptidase I (yscI) from Borrelia burgdorferi To be Published 0 0 0 0 1YBF Crystal structure of AMP nucleosidase from Bacteroides thetaiotaomicron VPI-5482 2004-12-20 2005-01-04 Krishnamurthy, N.R.,Swaminathan, S. Crystal structure of AMP nucleosidase from Bacteroides thetaiotaomicron To be published 0 0 0 0 1YCO Crystal structure of a branched-chain phosphotransacylase from Enterococcus faecalis V583 2004-12-22 2005-01-18 Rajashankar, K.R.,Kniewel, R.,Lee, K.,Lima, C.D. Crystal structure of a branched-chain phosphotransacylase from Enterococcus faecalis V583 To be Published 0 0 0 0 1YDF Crystal structure of a HAD-like phosphatase from Streptococcus pneumoniae 2004-12-23 2005-01-18 Seetharaman, J.,Swaminathan, S. Crystal Structure of a Hypothetical protein, hydrolase haloacid dehalogenase-like family To be Published 0 0 0 0 1YIR Crystal Structure of a Nicotinate Phosphoribosyltransferase 2005-01-12 2005-02-01 Seetharaman, J.,Swaminathan, S. Crystal Structure of a Nicotinate Phosphoribosyltransferase To be Published 0 0 0 0 1YMY Crystal Structure of the N-Acetylglucosamine-6-phosphate deacetylase from Escherichia coli K12 2005-01-21 2005-02-01 Fedorov, A.A.,Fedorov, E.V.,Xiang, D.F.,Raushel, F.M.,Almo, S.C. Crystal structure of the N-acetylglucosamine-6-phosphate deacetylase from Escherichia Coli To be Published 0 0 0 0 1YBD Crystal structure analysis of uridylate kinase from Neisseria meningitidis 2004-12-20 2005-02-15 Kumaran, D.,Swaminathan, S. Crystal structure analysis of uridylate kinase from Neisseria meningitidis To be Published 0 0 0 0 1YMM TCR/HLA-DR2b/MBP-peptide complex 2005-01-21 2005-05-03 Hahn, M.,Nicholson, M.J.,Pyrdol, J.,Wucherpfennig, K.W. Unconventional topology of self peptide-major histocompatibility complex binding by a human autoimmune T cell receptor. NAT.IMMUNOL. 2005 6 490 496 1ZA2 Structure of wild-type E. coli Aspartate Transcarbamoylase in the presence of CTP, carbamoyl phosphate at 2.50 A resolution 2005-04-05 2005-06-07 Wang, J.,Stieglitz, K.A.,Cardia, J.P.,Kantrowitz, E.R. Structural basis for ordered substrate binding and cooperativity in aspartate transcarbamoylase Proc.Natl.Acad.Sci.Usa 2005 102 8881 8886 1ZTP X-ray structure of gene product from homo sapiens Hs.433573 2005-05-27 2005-06-14 Bitto, E.,Bingman, C.A.,Robinson, H.,Allard, S.T.,Wesenberg, G.E.,Phillips, G.N. The structure at 2.5 A resolution of human basophilic leukemia-expressed protein BLES03. Acta Crystallogr.,Sect.F 2005 61 812 817 1ZWL Structure of WrbA from Pseudomonas aeruginosa in complex with FMN 2005-06-03 2005-06-14 Gorman, J.,Shapiro, L. Crystal structures of the tryptophan repressor binding protein WrbA and complexes with flavin mononucleotide. Protein Sci. 2005 14 3004 3012 1ZXU X-ray structure of protein from arabidopsis thaliana AT5G01750 2005-06-08 2005-06-21 CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS (CESG) X-ray structure of protein from arabidopsis thaliana AT5G01750 To be published 0 0 0 0 2A2L Crystal structure of Klebsiella pneumoniae protein ORFY, Pfam DUF336 2005-06-22 2005-06-28 Ramagopal, U.,Patskovsky, Y.,Almo, S.C. Crystal Structure of Klebsiella Pneumoniae Hypothetical Protein Orfy To be Published 0 0 0 0 1ZKL Multiple Determinants for Inhibitor Selectivity of Cyclic Nucleotide Phosphodiesterases 2005-05-03 2005-07-05 Wang, H.,Liu, Y.,Chen, Y.,Robinson, H.,Ke, H. Multiple elements jointly determine inhibitor selectivity of cyclic nucleotide phosphodiesterases 4 and 7 J.Biol.Chem. 2005 280 30949 30955 1ZL5 Crystal structure of Glu335Gln mutant of Clostridium botulinum neurotoxin E catalytic domain 2005-05-05 2005-07-05 Agarwal, R.,Binz, T.,Swaminathan, S. Analysis of Active Site Residues of Botulinum Neurotoxin E by Mutational, Functional, and Structural Studies: Glu335Gln Is an Apoenzyme. Biochemistry 2005 44 8291 8302 1YAU Structure of Archeabacterial 20S proteasome- PA26 complex 2004-12-17 2005-07-26 Forster, A.,Masters, E.I.,Whitby, F.G.,Robinson, H.,Hill, C.P. The 1.9 A structure of a proteasome-11S activator complex and implications for proteasome-PAN/PA700 interactions. Mol.Cell 2005 18 589 599 2A9F Crystal structure of a putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)) 2005-07-11 2005-08-02 Seetharaman, J.,Swaminathan, S. Crystal structure of a putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)) To be Published 0 0 0 0 2ABQ Crystal structure of fructose-1-phosphate kinase from Bacillus halodurans 2005-07-15 2005-08-02 Eswaramoorthy, S.,Swaminathan, S. Crystal structure of fructose-1-phosphate kinase from Bacillus halodurans To be Published 0 0 0 0 2AKO Crystal structure of Glutamate 5-kinase from Campylobacter jejuni 2005-08-03 2005-08-09 Gorman, J.,Shapiro, L. Crystal structure of Glutamate 5-kinase from Campylobacter jejuni To be Published 0 0 0 0 1YWO Phospholipase Cgamma1 SH3 in complex with a SLP-76 motif 2005-02-18 2005-08-16 Deng, L.,Velikovsky, C.A.,Swaminathan, C.P.,Cho, S.,Mariuzza, R.A. Structural Basis for Recognition of the T Cell Adaptor Protein SLP-76 by the SH3 Domain of Phospholipase Cgamma1 J.Mol.Biol. 2005 352 1 10 1YWP Phospholipase Cgamma1 SH3 2005-02-18 2005-08-16 Deng, L.,Velikovsky, C.A.,Swaminathan, C.P.,Cho, S.,Mariuzza, R.A. Structural Basis for Recognition of the T Cell Adaptor Protein SLP-76 by the SH3 Domain of Phospholipase Cgamma1 J.Mol.Biol. 2005 352 1 10 2AJT Crystal structure of L-Arabinose Isomerase from E.coli 2005-08-02 2005-08-16 Manjasetty, B.A.,Chance, M.R. Crystal Structure of Escherichia coli L-Arabinose Isomerase (ECAI), The Putative Target of Biological Tagatose Production J.Mol.Biol. 2006 360 297 309 2AP9 Crystal structure of acetylglutamate kinase from Mycobacterium tuberculosis CDC1551 2005-08-15 2005-08-30 Rajashankar, K.R.,Kniewel, R.,Lee, K.,Lima, C.D. Crystal structure of acetylglutamate kinase from Mycobacterium tuberculosis CDC1551 To be Published 0 0 0 0 1XEV Crystal structure of human carbonic anhydrase II in a new crystal form 2004-09-13 2005-09-20 Mazumdar, P.A.,Kumaran, D.,Das, A.K.,Swaminathan, S. Crystal structure of human carbonic anhydrase II in a new crystal form To be Published 0 0 0 0 2A8A Crystal structure of Clostridium botulinum neurotoxin serotype F light chain 2005-07-07 2005-09-20 Agarwal, R.,Binz, T.,Swaminathan, S. Structural analysis of botulinum neurotoxin serotype f light chain: implications on substrate binding and inhibitor design Biochemistry 2005 44 11758 11765 2B0A Crystal structure of protein MJ0783 from Methanococcus jannaschii 2005-09-13 2005-09-20 Patskovsky, Y.,Ramagopal, U.,Almo, S.C. Crystal Structure of Hypothetical Protein Mj0783 from Methanococcus Jannaschii To be Published 0 0 0 0 2B0O Crystal structure of UPLC1 GAP domain 2005-09-14 2005-09-20 Ismail, S.,Shen, L.,Arrowsmith, C.,Edwards, A.,Sundstrom, M.,Weigelt, J.,Bochkarev, A.,Park, H. Structural analysis of GAP and ankyrin domains of UPLC1 To be Published 0 0 0 0 1XEG Crystal structure of human carbonic anhydrase II complexed with an acetate ion 2004-09-10 2005-09-27 Mazumdar, P.A.,Kumaran, D.,Das, A.K.,Swaminathan, S. Crystal structure of human carbonic anhydrase II complexed with an acetate ion To be Published 0 0 0 0 2AHV Crystal Structure of Acyl-CoA transferase from E. coli O157:H7 (YdiF)-thioester complex with CoA- 1 2005-07-28 2005-11-01 Rangarajan, E.S.,Li, Y.,Ajamian, E.,Iannuzzi, P.,Kernaghan, S.D.,Fraser, M.E.,Cygler, M.,Matte, A. Crystal structure of E.coli YdiF: Structural basis for understanding the catalytic mechanism of family I coA transferase To be Published 0 0 0 0 2AHW Crystal Structure of Acyl-CoA transferase from E. coli O157:H7 (YdiF)-thioester complex with CoA- 2 2005-07-28 2005-11-01 Rangarajan, E.S.,Li, Y.,Ajamian, E.,Iannuzzi, P.,Kernaghan, S.D.,Fraser, M.E.,Cylgerm, M.,Matte, A. Crystal structure of E.coli YdiF: Structural basis for understanding the catalytic mechanism of family I coA transferase To be Published 0 0 0 0 2ETF Crystal structure of full length botulinum neurotoxin (Type B) light chain 2005-10-27 2005-12-06 Eswaramoorthy, S.,Swaminathan, S. Crystal structure of full length botulinum neurotoxin (Type B) light chain To be Published 0 0 0 0 2F4N Crystal structure of protein MJ1651 from Methanococcus jannaschii DSM 2661, Pfam DUF62 2005-11-23 2005-12-06 Rao, K.N.,Swaminathan, S. Crystal structure of a conserved hypothetical protein MJ1651 from Methanococcus jannaschii DSM 2661. To be Published 0 0 0 0 2B9C Structure of tropomyosin's mid-region: bending and binding sites for actin 2005-10-11 2006-01-03 Brown, J.H.,Zhou, Z.,Reshetnikova, L.,Robinson, H.,Yammani, R.D.,Tobacman, L.S.,Cohen, C. Structure of the mid-region of tropomyosin: Bending and binding sites for actin. Proc.Natl.Acad.Sci.Usa 2005 102 18878 18883 2FNU PseC aminotransferase with external aldimine 2006-01-11 2006-01-24 Schoenhofen, I.C.,Lunin, V.V.,Julien, J.P.,Li, Y.,Ajamian, E.,Matte, A.,Cygler, M.,Brisson, J.R.,Aubry, A.,Logan, S.M.,Bhatia, S.,Wakarchuk, W.W.,Young, N.M. Structural and Functional Characterization of PseC, an Aminotransferase Involved in the Biosynthesis of Pseudaminic Acid, an Essential Flagellar Modification in Helicobacter pylori J.Biol.Chem. 2006 281 8907 8916 2ESR conserved hypothetical protein- streptococcus pyogenes 2005-10-26 2006-02-07 Jiang, J.,Min, T.,Gorman, J.,Shapiro, L. Crystal Structure of hypothetical protein of Streptococcus Pygenes To be Published 0 0 0 0 1XXG Crystal Structure of Staphylococcal Enterotoxin G 2004-11-05 2006-02-21 Fernandez, M.M.,Bhattacharya, S.,Malchiodi, E.L.,Mariuzza, R.A. The Crystal Structure of Staphylococcal Enterotoxin G and binding affinity to T-cell receptor and MHC class II molecule To be Published 0 0 0 0 1Z3A Crystal structure of tRNA adenosine deaminase TadA from Escherichia coli 2005-03-10 2006-02-21 Malashkevich, V.N.,Kim, J.,Lisbin, M.,Almo, S.C. Crystal structure of tRNA deaminase TaDa from Escherichia coli To be Published 0 0 0 0 1ZWI Structure of mutant KcsA potassium channel 2005-06-03 2006-03-07 Cordero-Morales, J.F.,Cuello, L.G.,Zhao, Y.,Jogini, V.,Cortes, D.M.,Roux, B.,Perozo, E. Molecular determinants of gating at the potassium-channel selectivity filter. Nat.Struct.Mol.Biol. 2006 13 311 318 2ATK Structure of a mutant KcsA K+ channel 2005-08-25 2006-03-07 Cordero-Morales, J.F.,Cuello, L.G.,Zhao, Y.,Jogini, V.,Cortes, D.M.,Roux, B.,Perozo, E. Molecular determinants of gating at the potassium-channel selectivity filter. Nat.Struct.Mol.Biol. 2006 13 311 318 2G6T Crystal structure of an uncharacterized protein from Clostridium acetobutylicum 2006-02-25 2006-03-14 Rao, K.N.,Swaminathan, S. Crystal structure of an uncharacterized protein from Clostridium acetobutylicum To be Published 0 0 0 0 2F8Y Crystal structure of human Notch1 ankyrin repeats to 1.55A resolution. 2005-12-04 2006-04-04 Nam, Y.,Sliz, P.,Song, L.,Aster, J.C.,Blacklow, S.C. Structural basis for cooperativity in recruitment of MAML coactivators to Notch transcription complexes. Cell 2006 124 973 983 2FIQ Crystal structure of putative tagatose 6-phosphate kinase 2005-12-30 2006-04-04 Ramagopal, U.A.,Fedorov, E.,Almo, S.C. Crystal structure of putative tagatose 6-phosphate kinase To be Published 0 0 0 0 2FCW Structure of a Complex Between the Pair of the LDL Receptor Ligand-Binding Modules 3-4 and the Receptor Associated Protein (RAP). 2005-12-12 2006-05-16 Fisher, C.,Beglova, N.,Blacklow, S.C. Structure of an LDLR-RAP Complex Reveals a General Mode for Ligand Recognition by Lipoprotein Receptors Mol. Cell 2006 22 277 283 2FJI Crystal structure of the C-terminal domain of the exocyst subunit Sec6p 2006-01-02 2006-05-16 Sivaram, M.V.,Furgason, M.L.,Brewer, D.N.,Munson, M. The structure of the exocyst subunit Sec6p defines a conserved architecture with diverse roles. Nat.Struct.Mol.Biol. 2006 13 555 556 2DLJ 2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC 2006-04-19 2006-05-23 Jiang, J.,Sheng, J.,Carrasco, N.,Huang, Z. Selenium derivatization of nucleic acids for crystallography. Nucleic Acids Res. 2007 35 477 485 2FAO Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain 2005-12-07 2006-05-23 Zhu, H.,Nandakumar, J.,Aniukwu, J.,Wang, L.K.,Glickman, M.S.,Lima, C.D.,Shuman, S. Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D Proc.Natl.Acad.Sci.USA 2006 103 1711 1716 2FAQ Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain with ATP and Manganese 2005-12-07 2006-05-23 Zhu, H.,Nandakumar, J.,Aniukwu, J.,Wang, L.K.,Glickman, M.S.,Lima, C.D.,Shuman, S. Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D Proc.Natl.Acad.Sci.USA 2006 103 1711 1716 2FAR Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain with dATP and Manganese 2005-12-07 2006-05-23 Zhu, H.,Nandakumar, J.,Aniukwu, J.,Wang, L.K.,Glickman, M.S.,Lima, C.D.,Shuman, S. Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D Proc.Natl.Acad.Sci.USA 2006 103 1711 1716 2FRJ Nitrosyl Horse Heart Myoglobin, Nitrite/Dithionite Method 2006-01-19 2006-05-30 Copeland, D.M.,Soares, A.S.,West, A.H.,Richter-Addo, G.B. Crystal structures of the nitrite and nitric oxide complexes of horse heart myoglobin. J.Inorg.Biochem. 2006 100 1413 1425 2FRK Nitrosyl Horse Heart Myoglobin, Nitric Oxide Gas Method 2006-01-19 2006-05-30 Copeland, D.M.,Soares, A.S.,West, A.H.,Richter-Addo, G.B. Crystal structures of the nitrite and nitric oxide complexes of horse heart myoglobin. J.Inorg.Biochem. 2006 100 1413 1425 2A0W Structure of human purine nucleoside phosphorylase H257G mutant 2005-06-17 2006-06-06 Murkin, A.,Shi, W.,Schramm, V.L. Transition State Inhibitors and Structural analysis of Human PNP Mutants To be Published 0 0 0 0 2A0X Structure of human purine nucleoside phosphorylase H257F mutant 2005-06-17 2006-06-06 Murkin, A.,Shi, W.,Schramm, V.L. Transition State Inhibitors and Structural analysis of Human PNP Mutants To be Published 0 0 0 0 2A0Y Structure of human purine nucleoside phosphorylase H257D mutant 2005-06-17 2006-06-06 Murkin, A.,Shi, W.,Schramm, V.L. Transition State Inhibitors and Structural analysis of Human PNP Mutants To be Published 0 0 0 0 2FLO Crystal structure of exopolyphosphatase (PPX) from E. coli O157:H7 2006-01-06 2006-06-06 Rangarajan, E.S.,Nadeau, G.,Li, Y.,Wagner, J.,Hung, M.N.,Schrag, J.D.,Cygler, M.,Matte, A. The Structure of the Exopolyphosphatase (PPX) from Escherichia coli O157:H7 Suggests a Binding Mode for Long Polyphosphate Chains. J.Mol.Biol. 2006 359 1249 1260 2GPY Crystal structure of putative O-methyltransferase from Bacillus halodurans 2006-04-18 2006-06-06 Ramagopal, U.A.,V., Patskovsky Y.,Almo, S.C. Crystal structure of putative O-methyltransferase from Bacillus halodurans To be Published 0 0 0 0 2GUW Crystal structure of AMP Nucleosidase from Salmonella typhimurium LT2 2006-05-01 2006-06-06 Rao, K.N.,Swaminathan, S. Crystal structure of AMP Nucleosidase from Salmonella typhimurium LT2 To be Published 0 0 0 0 2GY5 Tie2 Ligand-Binding Domain Crystal Structure 2006-05-09 2006-06-06 Barton, W.A.,Tzvetkova-Robev, D.,Miranda, E.P.,Kolev, M.V.,Rajashankar, K.R.,Himanen, J.P.,Nikolov, D.B. Crystal structures of the Tie2 receptor ectodomain and the angiopoietin-2-Tie2 complex. Nat.Struct.Mol.Biol. 2006 13 524 532 2GY7 Angiopoietin-2/Tie2 Complex Crystal Structure 2006-05-09 2006-06-06 Barton, W.A.,Tzvetkova-Robev, D.,Miranda, E.P.,Kolev, M.V.,Rajashankar, K.R.,Himanen, J.P.,Nikolov, D.B. Crystal structures of the Tie2 receptor ectodomain and the angiopoietin-2-Tie2 complex. Nat.Struct.Mol.Biol. 2006 13 524 532 2H40 Crystal structure of the catalytic domain of unliganded PDE5 2006-05-23 2006-06-06 Wang, H.,Liu, Y.,Huai, Q.,Cai, J.,Zoraghi, R.,Francis, S.H.,Corbin, J.D.,Robinson, H.,Xin, Z.,Lin, G.,Ke, H. Multiple Conformations of Phosphodiesterase-5: Implications for enzyme function and drug development J.Biol.Chem. 2006 281 21469 21479 2H42 Crystal structure of PDE5 in complex with sildenafil 2006-05-23 2006-06-06 Wang, H.,Liu, Y.,Huai, Q.,Cai, J.,Zoraghi, R.,Francis, S.H.,Corbin, J.D.,Robinson, H.,Xin, Z.,Lin, G.,Ke, H. Multiple Conformations of Phosphodiesterase-5: Implications for enzyme function and drug development J.Biol.Chem. 2006 281 21469 21479 2H44 Crystal structure of PDE5A1 in complex with icarisid II 2006-05-23 2006-06-06 Wang, H.,Liu, Y.,Huai, Q.,Cai, J.,Zoraghi, R.,Francis, S.H.,Corbin, J.D.,Robinson, H.,Xin, Z.,Lin, G.,Ke, H. Multiple Conformations of Phosphodiesterase-5: Implications for enzyme function and drug development J.Biol.Chem. 2006 281 21469 21479 2FZW Structure of the binary complex of the E67L mutant of human glutathione-dependent formaldehyde dehydrogenase with NAD(H) 2006-02-10 2006-06-13 Sanghani, P.C.,Davis, W.I.,Zhai, L.,Robinson, H. Structure-function relationships in human glutathione-dependent formaldehyde dehydrogenase. Role of Glu-67 and Arg-368 in the catalytic mechanism. Biochemistry 2006 45 4819 4830 2GLF Crystal structure of Aminipeptidase (M18 family) from Thermotoga Maritima 2006-04-04 2006-06-13 Min, T.,Shapiro, L. Crystal structure of Aminipeptidase (M18 family) from Thermotoga Maritima To be Published 0 0 0 0 2GLJ crystal structure of aminopeptidase I from Clostridium acetobutylicum 2006-04-04 2006-06-13 Min, T.,Shapiro, L. crystal structure of aminopeptidase I from Clostridium acetobutylicum To be Published 0 0 0 0 2GPW Crystal Structure of the Biotin Carboxylase Subunit, F363A Mutant, of Acetyl-CoA Carboxylase from Escherichia coli. 2006-04-18 2006-07-04 Shen, Y.,Chou, C.Y.,Chang, G.G.,Tong, L. Is dimerization required for the catalytic activity of bacterial biotin carboxylase? Mol.Cell 2006 22 807 818 2GU1 Crystal structure of a zinc containing peptidase from vibrio cholerae 2006-04-28 2006-07-04 Ragumani, S.,Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure of a putative lysostaphin peptidase from Vibrio cholerae. Proteins 2008 72 1096 1103 2H68 Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex 2006-05-30 2006-07-04 Ruthenburg, A.J.,Wang, W.-K.,Graybosch, D.M.,Li, H.,Allis, C.D.,Patel, D.J.,Verdine, G.L. Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex. Nat.Struct.Mol.Biol. 2006 13 704 712 2HAE Crystal structure of a putative malic enzyme (malate oxidoreductase) 2006-06-12 2006-07-04 Seetharaman, J.,Swaminathan, S. Crystal structure of a putative malic enzyme (malate oxidoreductase) To be Published 0 0 0 0 2HAF Crystal structure of a putative translation repressor from Vibrio cholerae 2006-06-12 2006-07-04 Sugadev, R.,Seetharaman, J.,Kumaran, D.,Swaminathan, S. Crystal structure of a putative translation repressor from Vibrio cholerae To be Published 0 0 0 0 2EU3 Human Carbonic anhydrase II in complex with novel inhibitors 2005-10-28 2006-07-11 Fisher, S.Z.,Govindasamy, L.,Boyle, N.,Agbandje-McKenna, M.,Silverman, D.N.,Blackburn, G.M.,McKenna, R. X-ray crystallographic studies reveal that the incorporation of spacer groups in carbonic anhydrase inhibitors causes alternate binding modes. Acta Crystallogr.,Sect.F 2006 62 618 622 2G77 Crystal Structure of Gyp1 TBC domain in complex with Rab33 GTPase bound to GDP and AlF3 2006-02-27 2006-07-25 Pan, X.,Eathiraj, S.,Munson, M.,Lambright, D.G. TBC-domain GAPs for Rab GTPases accelerate GTP hydrolysis by a dual-finger mechanism. Nature 2006 442 303 306 2G77 Crystal Structure of Gyp1 TBC domain in complex with Rab33 GTPase bound to GDP and AlF3 2006-02-27 2006-07-25 Pan, X.,Eathiraj, S.,Munson, M.,Lambright, D.G. TBC-domain GAPs for Rab GTPases accelerate GTP hydrolysis by a dual-finger mechanism. Nature 2006 442 303 306 2GXA Crystal structure of papillomavirus E1 hexameric helicase with ssDNA and MgADP 2006-05-08 2006-07-25 Enemark, E.J.,Joshua-Tor, L. Mechanism of DNA translocation in a replicative hexameric helicase. Nature 2006 442 270 275 2FT0 Crystal structure of TDP-fucosamine acetyltransferase (WecD)- complex with acetyl-CoA 2006-01-23 2006-08-01 Hung, M.N.,Rangarajan, E.,Munger, C.,Nadeau, G.,Sulea, T.,Matte, A. Crystal Structure of TDP-Fucosamine Acetyltransferase (WecD) from Escherichia coli, an Enzyme Required for Enterobacterial Common Antigen Synthesis. J.Bacteriol. 2006 188 5606 5617 2HD0 Structure of the catalytic domain of hepatitis C virus NS2 2006-06-19 2006-08-01 Lorenz, I.C.,Marcotrigiano, J.,Dentzer, T.G.,Rice, C.M. Structure of the catalytic domain of the hepatitis C virus NS2-3 protease. Nature 2006 442 831 835 2FUF Crystal structure of the SV40 large T antigen origin-binding domain 2006-01-26 2006-08-22 Meinke, G.,Bullock, P.A.,Bohm, A. Crystal structure of the simian virus 40 large T-antigen origin-binding domain. J.Virol. 2006 80 4304 4312 2HV6 Crystal structure of the phosphotyrosyl phosphatase activator 2006-07-27 2006-08-22 Chao, Y.,Xing, Y.,Chen, Y.,Xu, Y.,Lin, Z.,Li, Z.,Jeffrey, P.D.,Stock, J.B.,Shi, Y. Structure and mechanism of the phosphotyrosyl phosphatase activator. Mol.Cell 2006 23 535 546 2HV7 Crystal structure of phosphotyrosyl phosphatase activator bound to ATPgammaS 2006-07-27 2006-08-22 Chao, Y.,Xing, Y.,Chen, Y.,Xu, Y.,Lin, Z.,Li, Z.,Jeffrey, P.D.,Stock, J.B.,Shi, Y. Structure and mechanism of the phosphotyrosyl phosphatase activator. Mol.Cell 2006 23 535 546 2FYU Crystal structure of bovine heart mitochondrial bc1 with jg144 inhibitor 2006-02-08 2006-08-29 Esser, L.,Gong, X.,Yang, S.,Yu, L.,Yu, C.A.,Xia, D. Surface-modulated motion switch: Capture and release of iron-sulfur protein in the cytochrome bc1 complex. Proc.Natl.Acad.Sci.Usa 2006 103 13045 13050 2HJ1 Crystal structure of a 3D domain-swapped dimer of protein HI0395 from Haemophilus influenzae 2006-06-29 2006-08-29 Ramagopal, U.A.,Patskovsky, Y.V.,Toro, R.,Almo, S.C. Crystal structure of a 3D domain-swapped dimer of hypothetical protein from Haemophilus influenzae (CASP Target) To be Published 0 0 0 0 2HZT Crystal Structure of a putative HTH-type transcriptional regulator ytcD 2006-08-09 2006-08-29 Madegowda, M.,Eswaramoorthy, S.,Desigan, K.,Burley, S.K.,Swaminathan, S. Crystal Structure of a putative HTH-type transcription regulator ytcD To be Published 0 0 0 0 2I44 Crystal structure of serine-threonine phosphatase 2C from Toxoplasma gondii 2006-08-21 2006-08-29 Almo, S.C.,Bonanno, J.B.,Sauder, J.M.,Emtage, S.,Dilorenzo, T.P.,Malashkevich, V.,Wasserman, S.R.,Swaminathan, S.,Eswaramoorthy, S.,Agarwal, R.,Kumaran, D.,Madegowda, M.,Ragumani, S.,Patskovsky, Y.,Alvarado, J.,Ramagopal, U.A.,Faber-Barata, J.,Chance, M.R.,Sali, A.,Fiser, A.,Zhang, Z.Y.,Lawrence, D.S.,Burley, S.K. Structural genomics of protein phosphatases. J.Struct.Funct.Genom. 2007 8 121 140 1ZYL Crystal Structure of Hypothetical Protein YihE from Escherichia coli 2005-06-10 2006-09-19 Zheng, J.,He, C.,Singh, V.K.,Martin, N.L.,Jia, Z. Crystal structure of a novel prokaryotic Ser/Thr kinase and its implication in the Cpx stress response pathway. Mol.Microbiol. 2007 63 1360 1371 2GHV Crystal structure of SARS spike protein receptor binding domain 2006-03-27 2006-09-19 Hwang, W.C.,Lin, Y.,Santelli, E.,Sui, J.,Jaroszewski, L.,Stec, B.,Farzan, M.,Marasco, W.A.,Liddington, R.C. Structural basis of neutralization by a human anti-severe acute respiratory syndrome spike protein antibody, 80R. J.Biol.Chem. 2006 281 34610 34616 2H7O Crystal structure of the Rho-GTPase binding domain of YpkA 2006-06-02 2006-09-19 Prehna, G.,Ivanov, M.I.,Bliska, J.B.,Stebbins, C.E. Yersinia virulence depends on mimicry of host rho-family nucleotide dissociation inhibitors. Cell(Cambridge,Mass.) 2006 126 869 880 2H7V Co-crystal structure of YpkA-Rac1 2006-06-04 2006-09-19 Prehna, G.,Ivanov, M.I.,Bliska, J.B.,Stebbins, C.E. Yersinia virulence depends on mimicry of host rho-family nucleotide dissociation inhibitors. Cell(Cambridge,Mass.) 2006 126 869 880 2H7V Co-crystal structure of YpkA-Rac1 2006-06-04 2006-09-19 Prehna, G.,Ivanov, M.I.,Bliska, J.B.,Stebbins, C.E. Yersinia virulence depends on mimicry of host rho-family nucleotide dissociation inhibitors. Cell(Cambridge,Mass.) 2006 126 869 880 2HTL Structure of the Escherichia coli ClC chloride channel Y445F mutant and Fab complex 2006-07-26 2006-09-19 Accardi, A.,Lobet, S.,Williams, C.,Miller, C.,Dutzler, R. Synergism Between Halide Binding and Proton Transport in a CLC-type Exchanger. J.Mol.Biol. 2006 362 691 699 2I9U Crystal Structure of Guanine Deaminase from C. acetobutylicum with bound guanine in the active site 2006-09-06 2006-09-19 Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal Structure of Guanine Deaminase from C. acetobutylicum with bound guanine in the active site To be Published 0 0 0 0 2G83 Structure of activated G-alpha-i1 bound to a nucleotide-state-selective peptide: Minimal determinants for recognizing the active form of a G protein alpha subunit 2006-03-01 2006-10-10 Johnston, C.A.,Lobanova, E.S.,Shavkunov, A.S.,Low, J.,Ramer, J.K.,Blaesius, R.,Fredericks, Z.,Willard, F.S.,Kuhlman, B.,Arshavsky, V.Y.,Siderovski, D.P. Minimal Determinants for Binding Activated Galpha from the Structure of a Galpha(i1)-Peptide Dimer. Biochemistry 2006 45 11390 11400 2HQ2 Structure of the Escherichia coli O157:H7 Heme Oxygenase ChuS in Complex with Heme 2006-07-18 2006-10-10 Suits, M.D.,Jaffer, N.,Jia, Z. Structure of the Escherichia coli O157:H7 heme oxygenase ChuS in complex with heme and enzymatic inactivation by mutation of the heme coordinating residue His-193. J.Biol.Chem. 2006 281 36776 36782 2HVQ Structure of Adenylated full-length T4 RNA Ligase 2 2006-07-30 2006-10-17 Nandakumar, J.,Shuman, S.,Lima, C.D. RNA Ligase Structures Reveal the Basis for RNA Specificity and Conformational Changes that Drive Ligation Forward. Cell 2006 127 71 84 2I5W Structure of hOGG1 crosslinked to DNA sampling a normal G adjacent to an oxoG 2006-08-26 2006-10-17 Banerjee, A.,Verdine, G.L. A nucleobase lesion remodels the interaction of its normal neighbor in a DNA glycosylase complex. Proc.Natl.Acad.Sci.Usa 2006 103 15020 15025 2ICS Crystal structure of an adenine deaminase 2006-09-13 2006-10-17 Sugadev, R.,Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure of an adenine deaminase TO BE PUBLISHED 0 0 0 0 2IF7 Crystal Structure of NTB-A 2006-09-20 2006-10-17 Cao, E.,Ramagopal, U.A.,Fedorov, A.,Fedorov, E.,Yan, Q.,Lary, J.W.,Cole, J.L.,Nathenson, S.G.,Almo, S.C. NTB-A Receptor Crystal Structure: Insights into Homophilic Interactions in the Signaling Lymphocytic Activation Molecule Receptor Family. Immunity 2006 25 559 570 2IM9 Crystal structure of protein LPG0564 from Legionella pneumophila str. Philadelphia 1, Pfam DUF1460 2006-10-04 2006-10-17 Bonanno, J.B.,Freeman, J.,Bain, K.T.,Powell, A.,Ozyurt, S.,Wasserman, S.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of hypothetical protein from Legionella pneumophila subsp. pneumophila str. Philadelphia 1 TO BE PUBLISHED 0 0 0 0 2IMG Crystal structure of dual specificity protein phosphatase 23 from Homo sapiens in complex with ligand malate ion 2006-10-04 2006-10-17 Agarwal, R.,Burley, S.K.,Swaminathan, S. Structure of human dual specificity protein phosphatase 23, VHZ, enzyme-substrate/product complex. J.Biol.Chem. 2008 283 8946 8953 2IMH Crystal structure of protein SPO2555 from Silicibacter pomeroyi, Pfam DUF1028 2006-10-04 2006-10-17 Bonanno, J.B.,Dickey, M.,Bain, K.T.,Slocombe, A.,Ozyurt, S.,Wasserman, S.,Burley, S.K.,Almo, S.C. Crystal structure of hypothetical protein from Silicibacter pomeroyi To be Published 0 0 0 0 2IML Crystal structure of a hypothetical protein from Archaeoglobus fulgidus binding riboflavin 5'-phosphate 2006-10-04 2006-10-17 Bonanno, J.B.,Dickey, M.,Bain, K.T.,Adams, J.,Ozyurt, S.,Wasserman, S.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of a hypothetical protein from Archaeoglobus fulgidus binding riboflavin 5'-phosphate To be Published 0 0 0 0 2HTH Structural basis for ubiquitin recognition by the human EAP45/ESCRT-II GLUE domain 2006-07-25 2006-10-24 Alam, S.L.,Langelier, C.,Whitby, F.G.,Koirala, S.,Robinson, H.,Hill, C.P.,Sundquist, W.I. Structural basis for ubiquitin recognition by the human ESCRT-II EAP45 GLUE domain. Nat.Struct.Mol.Biol. 2006 13 1029 1030 2IJQ Crystal structure of protein rrnAC1037 from Haloarcula marismortui, Pfam DUF309 2006-09-30 2006-10-24 Malashkevich, V.N.,Toro, R.,Sauder, J.M.,Thompson, D.A.,Rutter, M.E.,Dickey, M.,Groshong, C.,Bain, K.T.,Adams, J.M.,Reyes, C.,Rooney, I.,Powell, A.,Boice, A.,Gheyi, T.,Ozyurt, S.,Atwell, S.,Wasserman, S.R.,Schwinn, K.D.,Emtage, S.,Burley, S.K.,Almo, S.C. Crystal structure of the hypothetical Protein from Haloarcula marismortui To be Published 0 0 0 0 2F8S Crystal structure of Aa-Ago with externally-bound siRNA 2005-12-03 2006-10-31 Yuan, Y.R.,Pei, Y.,Chen, H.Y.,Tuschl, T.,Patel, D.J. A Potential Protein-RNA Recognition Event along the RISC-Loading Pathway from the Structure of A. aeolicus Argonaute with Externally Bound siRNA. Structure 2006 14 1557 1565 2IJR Crystal structure of a protein api92 from Yersinia pseudotuberculosis, Pfam DUF1281 2006-09-30 2006-10-31 Jin, X.,Min, T.,Bonanno, J.B.,Sauder, J.M.,Wasserman, S.,Smith, D.,Burley, S.K.,Shapiro, L. Crystal structure of a hypothetical protein from Yersinia pseudotuberculosis To be Published 0 0 0 0 2IOJ Crystal structure of protein AF1212 from Archaeoglobus fulgidus, Pfam DRTGG 2006-10-10 2006-10-31 Tyagi, R.,Burley, S.K.,Swaminathan, S. The crystal structure of a hypothetical protein (Y1212_ARCFU) from Archeoglobus fulgidus To be Published 0 0 0 0 2F3L Crystal Structure of a Lumenal Rfr-domain protein (Contig83.1_1_243_746) from Cyanothece sp. 51142 at 2.1 Angstrom resolution. 2005-11-21 2006-11-07 Buchko, G.W.,Ni, S.,Robinson, H.,Welsh, E.A.,Pakrasi, H.B.,Kennedy, M.A. Characterization of two potentially universal turn motifs that shape the repeated five-residues fold-Crystal structure of a lumenal pentapeptide repeat protein from Cyanothece 51142. Protein Sci. 2006 15 2579 2595 2F3L Crystal Structure of a Lumenal Rfr-domain protein (Contig83.1_1_243_746) from Cyanothece sp. 51142 at 2.1 Angstrom resolution. 2005-11-21 2006-11-07 Buchko, G.W.,Ni, S.,Robinson, H.,Welsh, E.A.,Pakrasi, H.B.,Kennedy, M.A. Characterization of two potentially universal turn motifs that shape the repeated five-residues fold-Crystal structure of a lumenal pentapeptide repeat protein from Cyanothece 51142. Protein Sci. 2006 15 2579 2595 2G0Y Crystal Structure of a Lumenal Pentapeptide Repeat Protein from Cyanothece sp 51142 at 2.3 Angstrom Resolution. Tetragonal Crystal Form 2006-02-13 2006-11-07 Buchko, G.W.,Ni, S.,Robinson, H.,Welsh, E.A.,Pakrasi, H.B.,Kennedy, M.A. Characterization of two potentially universal turn motifs that shape the repeated five-residues fold - Crystal structure of a lumenal pentapeptide repeat protein from Cyanothece 51142 Protein Sci. 2006 15 2579 2595 2IPQ Crystal structure of C-terminal domain of Salmonella Enterica protein STY4665, PFAM DUF1528 2006-10-12 2006-11-07 Ramagopal, U.A.,Bonanno, J.B.,Gilmore, J.,Toro, R.,Bain, K.T.,Reyes, C.,Sauder, J.M.,Burley, S.K.,Almo, S.C.,New York Structural GenomiX Research Consortium (NYSGXRC) Structure of C-terminal domain of Hypothetical protein STY4665 To be Published 0 0 0 0 2NLY Crystal structure of protein BH1492 from Bacillus halodurans, Pfam DUF610 2006-10-20 2006-11-07 Jin, X.,Sauder, J.M.,Wasserman, S.,Smith, D.,Burley, S.K.,Shapiro, L. Crystal structure of hypothetical protein BH1492 from Bacillus halodurans C-125 To be Published 0 0 0 0 2NQL Crystal structure of a member of the enolase superfamily from Agrobacterium tumefaciens 2006-10-31 2006-11-14 Patskovsky, Y.,Ramagopal, U.,Toro, R.,Sauder, J.M.,Dickey, M.,Adams, J.M.,Ozyurt, S.,Wasserman, S.R.,Gerlt, J.,Burley, S.K.,Almo, S.C. Crystal Structure of Enolase from Agrobacterium Tumefaciens C58 To be Published 0 0 0 0 2IJZ Crystal structure of aminopeptidase 2006-10-02 2006-11-14 Min, T.,Burley, S.,Shapiro, L. Crystal structrue of putative aminopeptidase 2 from Pseudomonas Aeruginosa To be Published 0 0 0 0 2IO3 Crystal structure of human Senp2 in complex with RanGAP1-SUMO-2 2006-10-09 2006-11-14 Reverter, D.,Lima, C.D. Structural basis for SENP2 protease interactions with SUMO precursors and conjugated substrates. Nat.Struct.Mol.Biol. 2006 13 1060 1068 2IRM Crystal structure of mitogen-activated protein kinase kinase kinase 7 interacting protein 1 from Anopheles gambiae 2006-10-15 2006-11-14 Almo, S.C.,Bonanno, J.B.,Sauder, J.M.,Emtage, S.,Dilorenzo, T.P.,Malashkevich, V.,Wasserman, S.R.,Swaminathan, S.,Eswaramoorthy, S.,Agarwal, R.,Kumaran, D.,Madegowda, M.,Ragumani, S.,Patskovsky, Y.,Alvarado, J.,Ramagopal, U.A.,Faber-Barata, J.,Chance, M.R.,Sali, A.,Fiser, A.,Zhang, Z.Y.,Lawrence, D.S.,Burley, S.K. Structural genomics of protein phosphatases. J Struct Funct Genomics 2007 8 121 140 2NRF Crystal Structure of GlpG, a Rhomboid family intramembrane protease 2006-11-02 2006-11-14 Wu, Z.,Yan, N.,Feng, L.,Oberstein, A.,Yan, H.,Baker, R.P.,Gu, L.,Jeffrey, P.D.,Urban, S.,Shi, Y. Structural analysis of a rhomboid family intramembrane protease reveals a gating mechanism for substrate entry. Nat.Struct.Mol.Biol. 2006 13 1084 1091 2IAK Crystal Structure of a protease resistant fragment of the plakin domain of Bullous Pemphigoid Antigen1 (BPAG1) 2006-09-08 2006-11-28 Jefferson, J.J.,Ciatto, C.,Shapiro, L.,Liem, R.K. Structural analysis of the plakin domain of bullous pemphigoid antigen1 (BPAG1) suggests that plakins are members of the spectrin superfamily. J.Mol.Biol. 2007 366 244 257 2NPP Structure of the Protein Phosphatase 2A Holoenzyme 2006-10-28 2006-12-12 Xu, Y.,Xing, Y.,Chen, Y.,Chao, Y.,Lin, Z.,Fan, E.,Yu, J.W.,Strack, S.,Jeffrey, P.D.,Shi, Y. Structure of the protein phosphatase 2A holoenzyme Cell(Cambridge,Mass.) 2006 127 1239 1251 2NW5 Structure of an Encephalitozoon cuniculi Methionine Aminopeptidase Type 2 2006-11-14 2006-12-12 Alvarado, J.,Russell, M.,Zhang, A.,Adams, J.,Burley, S.K.,Weiss, L.M.,Almo, S.C. Structural basis of inhibition of an Encephalitozoon cuniculi Methionine Aminopeptidase Type 2 To be Published 0 0 0 0 2NYL Crystal structure of Protein Phosphatase 2A (PP2A) holoenzyme with the catalytic subunit carboxyl terminus truncated 2006-11-20 2006-12-12 Xu, Y.,Xing, Y.,Chen, Y.,Chao, Y.,Lin, Z.,Fan, E.,Yu, J.W.,Strack, S.,Jeffrey, P.D.,Shi, Y. Structure of the Protein Phosphatase 2A Holoenzyme. Cell 2006 127 1239 1251 2NYM Crystal Structure of Protein Phosphatase 2A (PP2A) with C-terminus truncated catalytic subunit 2006-11-21 2006-12-12 Xu, Y.,Xing, Y.,Chen, Y.,Chao, Y.,Lin, Z.,Fan, E.,Yu, J.W.,Strack, S.,Jeffrey, P.D.,Shi, Y. Structure of the Protein Phosphatase 2A Holoenzyme. Cell 2006 127 1239 1251 2O3J Structure of Caenorhabditis Elegans UDP-Glucose Dehydrogenase 2006-12-01 2006-12-12 Zhang, Y.,Zhan, C.,Patskovsky, Y.,Ramagopal, U.,Shi, W.,Toro, R.,Wengerter, B.C.,Milstein, S.,Vidal, M.,Burley, S.K.,Almo, S.C. Crystal Structure of Caenorhabditis Elegans Udp-Glucose Dehydrogenase To be Published 0 0 0 0 2NX2 Crystal structure of protein ypsA from Bacillus subtilis, Pfam DUF1273 2006-11-16 2006-12-19 Ramagopal, U.A.,Alvarado, J.,Dickey, M.,Reyes, C.,Toro, R.,Bain, K.,Gheyi, T.,Sauder, J.M.,Burley, S.K.,Almo, S.C.,New York Structural GenomiX Research Consortium Crystal structure of hypothetical protein ypsA from Bacillus subtilis. To be Published 0 0 0 0 2NXO Crystal structure of protein SCO4506 from Streptomyces coelicolor, Pfam DUF178 2006-11-17 2006-12-19 Tyagi, R.,Eswaramoorthy, S.,Burley, S.K.,Swaminathan, S. The crystal structure of a hypothetical protein SCO4506 (gene ID: Q9L0T8) from Streptomyces coelicolor to 2.04 Angstrom resolution To be Published 0 0 0 0 2IQH Influenza A virus nucleoprotein NP at 3.2A resolution 2006-10-13 2006-12-26 Ye, Q.,Krug, R.M.,Tao, Y.J. The mechanism by which influenza A virus nucleoprotein forms oligomers and binds RNA. Nature 2006 444 1078 1082 2I53 Crystal structure of Cyclin K 2006-08-23 2007-01-02 Baek, K.,Brown, R.S.,Birrane, G.,Ladias, J.A. Crystal Structure of Human Cyclin K, a Positive Regulator of Cyclin-dependent Kinase 9. J.Mol.Biol. 2007 366 563 573 2FLE Structural analysis of asymmetric inhibitor bound to the HIV-1 Protease V82A mutant 2006-01-05 2007-01-16 Sussman, F.,Clemente, J.C.,Robbins, A.,Grana, P.,Paleo, M.R.,Correa, J.F.,Villaverde, M.C.,Sardina, F.J.,Govindasamy, L.,Agbandje-McKenna, M.,McKenna, R.,Dunn, B.M. Indunced Fit of Ligands by the HIV-1 Protease To be published 0 0 0 0 2E4O X-ray Crystal Structure of Aristolochene Synthase from Aspergillus terreus and the Evolution of Templates for the Cyclization of Farnesyl Diphosphate 2006-12-15 2007-01-23 Shishova, E.Y.,Di Costanzo, L.,Cane, D.E.,Christianson, D.W. X-ray Crystal Structure of Aristolochene Synthase from Aspergillus terreus and the Evolution of Templates for the Cyclization of Farnesyl Diphosphate To be published 0 0 0 0 2HHP Structure of yeast poly(A) polymerase in a closed conformation. 2006-06-28 2007-01-23 Bohm, A.,Toth, J. Movements of yeast poly(A) polymerase along two well-defined rotation axes. To be Published 0 0 0 0 2O09 Crystal structure of the H-NOX domain from Nostoc sp. PCC 7120 2006-11-27 2007-01-30 Ma, X.,Sayed, N.,Beuve, A.,van den Akker, F. NO and CO differentially activate soluble guanylyl cyclase via a heme pivot-bend mechanism. Embo J. 2007 26 578 588 2OB3 Structure of Phosphotriesterase mutant H257Y/L303T 2006-12-18 2007-01-30 Kim, J.,Ramagopal, U.A.,Tsai, P.,Raushel, F.M.,Almo, S.C. Structure of Phosphotriesterase mutant H257Y/L303T To be Published 0 0 0 0 2OO2 Crystal structure of protein AF1782 from Archaeoglobus fulgidus, Pfam DUF357 2007-01-25 2007-02-06 Bonanno, J.B.,Rutter, M.,Bain, K.T.,Adams, J.,Sridhar, V.,Smyth, L.,Freeman, J.,Atwell, S.,Sauder, M.J.,Burley, S.K.,Almo, S.C. Crystal structure of the hypothetical AF_1782 protein from Archaeoglobus fulgidus To be Published 0 0 0 0 2OO3 Crystal structure of protein LPL1258 from Legionella pneumophila str. Philadelphia 1, Pfam DUF519 2007-01-25 2007-02-06 Bonanno, J.B.,Freeman, J.,Bain, K.T.,Slocombe, A.,Reyes, C.,Ozyurt, S.,Smyth, L.,Atwell, S.,Sauder, M.J.,Burley, S.K.,Almo, S.C. Crystal structure of the hypothetical lpl1258 protein from Legionella pneumophila To be Published 0 0 0 0 2OO6 Crystal structure of hypothetical L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400 2007-01-25 2007-02-06 Bonanno, J.B.,Dickey, M.,Bain, K.T.,Wu, B.,Sridhar, V.,Freeman, J.,Smyth, L.,Atwell, S.,Sauder, M.J.,Burley, S.K.,Almo, S.C. Crystal structure of hypothetical L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400 To be Published 0 0 0 0 2IF9 Crystal Structure of SV40 T-antigen origin binding domain disulfide-linked dimer 2006-09-20 2007-02-13 Meinke, G.,Phelan, P.,Moine, S.,Bochkareva, E.,Bochkarev, A.,Bullock, P.A.,Bohm, A. The Crystal Structure of the SV40 T-Antigen Origin Binding Domain in Complex with DNA Plos Biol. 2007 5 0 0 2NTC Crystal Structure of sv40 large T antigen origin binding domain with DNA 2006-11-07 2007-02-13 Meinke, G.,Phelan, P.,Moine, S.,Bochkareva, E.,Bochkarev, A.,Bullock, P.A.,Bohm, A. The Crystal Structure of the SV40 T-Antigen Origin Binding Domain in Complex with DNA Plos Biol. 2007 5 0 0 2OJ5 Crystal Structure of Reovirus T3D Attachment Protein Sigma1 head domain wild-type at 1.75 A resolution 2007-01-12 2007-02-13 Schelling, P.,Guglielmi, K.M.,Kirchner, E.,Paetzold, B.,Dermody, T.S.,Stehle, T. The Reovirus Sigma1 Aspartic Acid Sandwich: A TRIMERIZATION MOTIF POISED FOR CONFORMATIONAL CHANGE. J.Biol.Chem. 2007 282 11582 11589 2HVK crystal structure of the KcsA-Fab-TBA complex in high K+ 2006-07-28 2007-02-20 Yohannan, S.,Hu, Y.,Zhou, Y. Crystallographic Study of the Tetrabutylammonium Block to the KcsA K(+) Channel. J.Mol.Biol. 2007 366 806 814 2OOD Crystal structure of guanine deaminase from Bradyrhizobium japonicum 2007-01-25 2007-02-20 Agarwal, R.,Burley, S.K.,Swaminathan, S. Crystal structure of guanine deaminase from Bradyrhizobium japonicum To be Published 0 0 0 0 2NWL Crystal structure of GltPh in complex with L-Asp 2006-11-15 2007-02-27 Boudker, O.,Ryan, R.M.,Yernool, D.,Shimamoto, K.,Gouaux, E. Coupling substrate and ion binding to extracellular gate of a sodium-dependent aspartate transporter. Nature 2007 445 387 393 2NWX Crystal structure of GltPh in complex with L-aspartate and sodium ions 2006-11-16 2007-02-27 Boudker, O.,Ryan, R.M.,Yernool, D.,Shimamoto, K.,Gouaux, E. Coupling substrate and ion binding to extracellular gate of a sodium-dependent aspartate transporter. Nature 2007 445 387 393 2O3Z X-ray crystal structure of LpxC complexed with 3-heptyloxybenzoate 2006-12-02 2007-02-27 Shin, H.,Gennadios, H.A.,Whittington, D.A.,Christianson, D.W. Amphipathic benzoic acid derivatives: synthesis and binding in the hydrophobic tunnel of the zinc deacetylase LpxC. Bioorg.Med.Chem. 2007 15 2617 2623 2OVB Crystal Structure of StaL-sulfate complex 2007-02-13 2007-02-27 Shi, R.,Lamb, S.S.,Bhat, S.,Sulea, T.,Wright, G.D.,Matte, A.,Cygler, M. Crystal structure of StaL, a glycopeptide antibiotic sulfotransferase from Streptomyces toyocaensis. J.Biol.Chem. 2007 282 13073 13086 2OQY The crystal structure of muconate cycloisomerase from Oceanobacillus iheyensis 2007-02-01 2007-03-06 Fedorov, A.A.,Toro, R.,Fedorov, E.V.,Bonanno, J.,Sauder, M.,Burley, S.K.,Gerlt, J.A.,Almo, S.C. The crystal structure of muconate cycloisomerase from Oceanobacillus iheyensis To be Published 0 0 0 0 2P27 Crystal Structure of Human Pyridoxal Phosphate Phosphatase with Mg2+ at 1.9 A resolution 2007-03-07 2007-03-13 Almo, S.C.,Bonanno, J.B.,Sauder, J.M.,Emtage, S.,Dilorenzo, T.P.,Malashkevich, V.,Wasserman, S.R.,Swaminathan, S.,Eswaramoorthy, S.,Agarwal, R.,Kumaran, D.,Madegowda, M.,Ragumani, S.,Patskovsky, Y.,Alvarado, J.,Ramagopal, U.A.,Faber-Barata, J.,Chance, M.R.,Sali, A.,Fiser, A.,Zhang, Z.Y.,Lawrence, D.S.,Burley, S.K. Structural genomics of protein phosphatases. J.Struct.Funct.Genom. 2007 8 121 140 2OUN crystal structure of PDE10A2 in complex with AMP 2007-02-12 2007-03-20 Wang, H.,Liu, Y.,Hou, J.,Zheng, M.,Robinson, H.,Ke, H. From the Cover: Structural insight into substrate specificity of phosphodiesterase 10. Proc.Natl.Acad.Sci.Usa 2007 104 5782 5787 2OUP crystal structure of PDE10A 2007-02-12 2007-03-20 Wang, H.,Liu, Y.,Hou, J.,Zheng, M.,Robinson, H.,Ke, H. From the Cover: Structural insight into substrate specificity of phosphodiesterase 10. Proc.Natl.Acad.Sci.Usa 2007 104 5782 5787 2OUQ crystal structure of PDE10A2 in complex with GMP 2007-02-12 2007-03-20 Wang, H.,Liu, Y.,Hou, J.,Zheng, M.,Robinson, H.,Ke, H. From the Cover: Structural insight into substrate specificity of phosphodiesterase 10. Proc.Natl.Acad.Sci.Usa 2007 104 5782 5787 2OUR crystal structure of PDE10A2 mutant D674A in complex with cAMP 2007-02-12 2007-03-20 Wang, H.,Liu, Y.,Hou, J.,Zheng, M.,Robinson, H.,Ke, H. From the Cover: Structural insight into substrate specificity of phosphodiesterase 10. Proc.Natl.Acad.Sci.Usa 2007 104 5782 5787 2OUS crystal structure of PDE10A2 mutant D674A 2007-02-12 2007-03-20 Wang, H.,Liu, Y.,Hou, J.,Zheng, M.,Robinson, H.,Ke, H. From the Cover: Structural insight into substrate specificity of phosphodiesterase 10. Proc.Natl.Acad.Sci.Usa 2007 104 5782 5787 2OUU crystal structure of PDE10A2 mutant D674A in complex with cGMP 2007-02-12 2007-03-20 Wang, H.,Liu, Y.,Hou, J.,Zheng, M.,Robinson, H.,Ke, H. From the Cover: Structural insight into substrate specificity of phosphodiesterase 10. Proc.Natl.Acad.Sci.Usa 2007 104 5782 5787 2OUV crystal structure of pde10a2 mutant of D564N 2007-02-12 2007-03-20 Wang, H.,Liu, Y.,Hou, J.,Zheng, M.,Robinson, H.,Ke, H. From the Cover: Structural insight into substrate specificity of phosphodiesterase 10. Proc.Natl.Acad.Sci.Usa 2007 104 5782 5787 2OUY crystal structure of pde10a2 mutant D564A in complex with cAMP. 2007-02-12 2007-03-20 Wang, H.,Liu, Y.,Hou, J.,Zheng, M.,Robinson, H.,Ke, H. From the Cover: Structural insight into substrate specificity of phosphodiesterase 10. Proc.Natl.Acad.Sci.Usa 2007 104 5782 5787 2OVL Crystal structure of a racemase from Streptomyces coelicolor A3(2) 2007-02-14 2007-03-20 Rao, K.N.,Burley, S.K.,Swaminathan, S. Crystal structure of a racemase from Streptomyces coelicolor A3(2) To be Published 0 0 0 0 2P2E Crystal structure of a putative Fe-S biosynthesis protein from Lactobacillus salivarius with novel protein fold 2007-03-07 2007-03-20 Agarwal, R.,Burley, S.K.,Swaminathan, S. Crystal structure of a putative Fe-S biosynthesis protein from Lactobacillus salivarius with novel protein fold To be Published 0 0 0 0 2JBY A VIRAL PROTEIN UNEXPECTEDLY MIMICS THE STRUCTURE AND FUNCTION OF PRO-SURVIVAL BCL-2 2006-12-14 2007-03-27 Kvansakul, M.,Van Delft, M.F.,Lee, E.F.,Gulbis, J.M.,Fairlie, W.D.,Huang, D.C.S.,Colman, P.M. A Structural Viral Mimic of Prosurvival Bcl-2: A Pivotal Role for Sequestering Proapoptotic Bax and Bak. Mol.Cell 2007 25 933 0 2NL9 Crystal structure of the Mcl-1:Bim BH3 complex 2006-10-19 2007-03-27 Czabotar, P.E.,Lee, E.F.,van Delft, M.F.,Day, C.L.,Smith, B.J.,Huang, D.C.S.,Fairlie, W.D.,Hinds, M.G.,Colman, P.M. Structural insights into the degradation of MCL-1 induced by BH3 domains To be Published 0 0 0 0 2NLA Crystal structure of the Mcl-1:mNoxaB BH3 complex 2006-10-19 2007-03-27 Czabotar, P.E.,Lee, E.F.,van Delft, M.F.,Day, C.L.,Smith, B.J.,Huang, D.C.S.,Fairlie, W.D.,Hinds, M.G.,Colman, P.M. Structural insights into the degradation of MCL-1 induced by BH3 domains To be Published 0 0 0 0 2OEV Crystal structure of ALIX/AIP1 2007-01-01 2007-03-27 Fisher, R.D.,Chung, H.Y.,Zhai, Q.,Robinson, H.,Sundquist, W.I.,Hill, C.P. Structural and Biochemical Studies of ALIX/AIP1 and Its Role in Retrovirus Budding Cell 2007 128 841 852 2OEX Structure of ALIX/AIP1 V Domain 2007-01-01 2007-03-27 Fisher, R.D.,Chung, H.Y.,Zhai, Q.,Robinson, H.,Sundquist, W.I.,Hill, C.P. Structural and Biochemical Studies of ALIX/AIP1 and Its Role in Retrovirus Budding Cell 2007 128 841 852 2GBB Crystal structure of secreted chorismate mutase from Yersinia pestis 2006-03-10 2007-04-03 Kim, S.-K.,Robinson, H.,Nelson, B.C.,Reddy, P.T.,Ladner, J.E. Crystal Structure of Yersinia pestis Chorismate Mutase To be Published 0 0 0 0 2IAL Structural basis for recognition of mutant self by a tumor-specific, MHC class II-restricted TCR 2006-09-08 2007-04-03 Deng, L.,Langley, R.J.,Brown, P.H.,Xu, G.,Teng, L.,Wang, Q.,Gonzales, M.I.,Callender, G.G.,Nishimura, M.I.,Topalian, S.L.,Mariuzza, R.A. Structural basis for the recognition of mutant self by a tumor-specific, MHC class II-restricted T cell receptor Nat.Immunol. 2007 8 398 408 2ITQ CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN G719S MUTATION IN COMPLEX WITH AFN941 2006-05-25 2007-04-03 Yun, C.-H.,Boggon, T.J.,Li, Y.,Woo, S.,Greulich, H.,Meyerson, M.,Eck, M.J. Structures of Lung Cancer-Derived Egfr Mutants and Inhibitor Complexes: Mechanism of Activation and Insights Into Differential Inhibitor Sensitivity Cancer Cell 2007 11 217 0 2OO4 Structure of LNR-HD (Negative Regulatory Region) from human Notch 2 2007-01-25 2007-04-03 Gordon, W.R.,Vardar-Ulu, D.,Histen, G.,Sanchez-Irizarry, C.,Aster, J.C.,Blacklow, S.C. Structural basis for autoinhibition of Notch Nat.Struct.Mol.Biol. 2007 14 295 300 2OTJ 13-deoxytedanolide bound to the large subunit of Haloarcula marismortui 2007-02-08 2007-04-03 Schroeder, S.J.,Blaha, G.,Tirado-Rives, J.,Steitz, T.A.,Moore, P.B. The Structures of Antibiotics Bound to the E Site Region of the 50 S Ribosomal Subunit of Haloarcula marismortui: 13-Deoxytedanolide and Girodazole. J.Mol.Biol. 2007 367 1471 1479 2OTL Girodazole bound to the large subunit of Haloarcula marismortui 2007-02-08 2007-04-03 Schroeder, S.J.,Blaha, G.,Tirado-Rives, J.,Steitz, T.A.,Moore, P.B. The Structures of Antibiotics Bound to the E Site Region of the 50 S Ribosomal Subunit of Haloarcula marismortui: 13-Deoxytedanolide and Girodazole. J.Mol.Biol. 2007 367 1471 1479 2P67 Crystal structure of LAO/AO transport system kinase 2007-03-16 2007-04-03 Ramagopal, U.A.,Adams, J.,Rodgers, L.,Toro, R.,Bain, K.,Rutter, M.,Schwinn, K.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of LAO/AO transport system kinase To be Published 0 0 0 0 2P69 Crystal Structure of Human Pyridoxal Phosphate Phosphatase with PLP 2007-03-16 2007-04-03 Almo, S.C.,Bonanno, J.B.,Sauder, J.M.,Emtage, S.,Dilorenzo, T.P.,Malashkevich, V.,Wasserman, S.R.,Swaminathan, S.,Eswaramoorthy, S.,Agarwal, R.,Kumaran, D.,Madegowda, M.,Ragumani, S.,Patskovsky, Y.,Alvarado, J.,Ramagopal, U.A.,Faber-Barata, J.,Chance, M.R.,Sali, A.,Fiser, A.,Zhang, Z.Y.,Lawrence, D.S.,Burley, S.K. Structural genomics of protein phosphatases. J.Struct.Funct.Genom. 2007 8 121 140 2P9B Crystal structure of putative prolidase from Bifidobacterium longum 2007-03-24 2007-04-03 Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure of putative prolidase from Bifidobacterium longum To be Published 0 0 0 0 2PAJ Crystal structure of an amidohydrolase from an environmental sample of Sargasso sea 2007-03-27 2007-04-03 Agarwal, R.,Burley, S.K.,Swaminathan, S. Crystal structure of an amidohydrolase from an environmental sample of Sargasso sea To be Published 0 0 0 0 2PBN Crystal structure of the human tyrosine receptor phosphate gamma 2007-03-28 2007-04-03 Almo, S.C.,Bonanno, J.B.,Sauder, J.M.,Emtage, S.,Dilorenzo, T.P.,Malashkevich, V.,Wasserman, S.R.,Swaminathan, S.,Eswaramoorthy, S.,Agarwal, R.,Kumaran, D.,Madegowda, M.,Ragumani, S.,Patskovsky, Y.,Alvarado, J.,Ramagopal, U.A.,Faber-Barata, J.,Chance, M.R.,Sali, A.,Fiser, A.,Zhang, Z.Y.,Lawrence, D.S.,Burley, S.K. Structural genomics of protein phosphatases. J.Struct.Funct.Genom. 2007 8 121 140 2OYP T Cell Immunoglobulin Mucin-3 Crystal Structure Revealed a Galectin-9-independent Binding Surface 2007-02-22 2007-04-10 Cao, E.,Zang, X.,Ramagopal, U.A.,Mukhopadhaya, A.,Fedorov, A.A.,Fedorov, E.V.,Zencheck, W.D.,Lary, J.W.,Cole, J.L.,Deng, H.,Xiao, H.,Dilorenzo, T.P.,Allison, J.P.,Nathenson, S.G.,Almo, S.C. T cell immunoglobulin mucin-3 crystal structure reveals a galectin-9-independent ligand-binding surface Immunity 2007 26 311 321 2PB9 Crystal structure of C-terminal domain of phosphomethylpyrimidine kinase 2007-03-28 2007-04-10 Eswaramoorthy, S.,Burley, S.K.,Swaminathan, S. Crystal structure of C-terminal domain of phosphomethylpyrimidine kinase To be Published 0 0 0 0 2PBE Crystal structure of an aminoglycoside 6-adenyltransferase from Bacillus subtilis 2007-03-28 2007-04-10 Tyagi, R.,Eswaramoorthy, S.,Burley, S.K.,Swaminathan, S. The crystal structure of an aminoglycoside 6-adenyltransferase from Bacillus subtilis To be Published 0 0 0 0 2PBZ Crystal structure of an IMP biosynthesis protein PurP from Thermococcus kodakaraensis 2007-03-29 2007-04-10 Agarwal, R.,Burley, S.K.,Swaminathan, S. Crystal structure of an IMP biosynthesis protein PurP from Thermococcus kodakaraensis To be Published 0 0 0 0 2PGE Crystal structure of MenC from Desulfotalea psychrophila LSv54 2007-04-09 2007-04-24 Agarwal, R.,Burley, S.K.,Swaminathan, S. Crystal structure of MenC from Desulfotalea psychrophila LSv54 To be Published 0 0 0 0 2PGS Crystal structure of a putative deoxyguanosinetriphosphate triphosphohydrolase from Pseudomonas syringae pv. phaseolicola 1448A 2007-04-10 2007-04-24 Rao, K.N.,Burley, S.K.,Swaminathan, S. Crystal structure of a putative deoxyguanosinetriphosphate triphosphohydrolase from Pseudomonas syringae pv. phaseolicola 1448A at 2.35 A resolution To be Published 0 0 0 0 2PGW Crystal structure of a putative muconate cycloisomerase from Sinorhizobium meliloti 1021 2007-04-10 2007-04-24 Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure of a putative muconate cycloisomerase from Sinorhizobium meliloti 1021 To be Published 0 0 0 0 2PKG Structure of a complex between the A subunit of protein phosphatase 2A and the small t antigen of SV40 2007-04-17 2007-05-15 Chen, Y.,Xu, Y.,Bao, Q.,Xing, Y.,Li, Z.,Lin, Z.,Stock, J.B.,Jeffrey, P.D.,Shi, Y. Structural and biochemical insights into the regulation of protein phosphatase 2A by small t antigen of SV40. Nat.Struct.Mol.Biol. 2007 14 527 534 2POF Crystal structure of CDP-diacylglycerol pyrophosphatase 2007-04-26 2007-05-15 Madegowda, M.,Eswaramoorthy, S.,Burley, S.K.,Swaminathan, S. Crystal structure of CDP-diacylglycerol pyrophosphatase. To be Published 0 0 0 0 2POZ Crystal structure of a putative dehydratase from Mesorhizobium loti 2007-04-27 2007-05-15 Sugadev, R.,Eswaramoorthy, S.,Burley, S.K.,Swaminathan, S. Crystal structure of a putative dehydratase from Mesorhizobium loti. To be Published 0 0 0 0 2PTF Crystal structure of protein MTH_863 from Methanobacterium thermoautotrophicum bound to FMN 2007-05-08 2007-05-15 Bonanno, J.B.,Rutter, M.,Bain, K.T.,Iizuka, M.,Ozyurt, S.,Smith, D.,Wasserman, S.,Sauder, M.J.,Burley, S.K.,Almo, S.C. Crystal structure of protein MTH_863 from Methanobacterium thermoautotrophicum bound to FMN. To be Published 0 0 0 0 2OC4 Crystal stucture of human purine nucleoside phosphorylase mutant H257D with Imm-H 2006-12-20 2007-05-22 Murkin, A.S.,Birck, M.R.,Rinaldo-Matthis, A.,Shi, W.,Taylor, E.A.,Almo, S.C.,Schramm, V.L. Neighboring Group Participation in the Transition State of Human Purine Nucleoside Phosphorylase Biochemistry 2007 46 5038 5049 2OC9 Crystal stucture of human purine nucleoside phosphorylase mutant H257G with Imm-H 2006-12-20 2007-05-22 Murkin, A.S.,Birck, M.R.,Rinaldo-Matthis, A.,Shi, W.,Taylor, E.A.,Almo, S.C.,Schramm, V.L. Neighboring Group Participation in the Transition State of Human Purine Nucleoside Phosphorylase Biochemistry 2007 46 5038 5049 2ON6 Crystal stucture of human purine nucleoside phosphorylase mutant H257F with Imm-H 2007-01-23 2007-05-22 Murkin, A.S.,Birck, M.R.,Rinaldo-Matthis, A.,Shi, W.,Taylor, E.A.,Almo, S.C.,Schramm, V.L. Neighboring Group Participation in the Transition State of Human Purine Nucleoside Phosphorylase Biochemistry 2007 46 5038 5049 2PFV S. cerevisiae Exo70 with additional residues to 2.1 Angrstrom resolution 2007-04-05 2007-05-22 Moore, B.A.,Robinson, H.H.,Xu, Z. The crystal structure of mouse Exo70 reveals unique features of the mammalian exocyst. J.Mol.Biol. 2007 371 410 421 2PJU Crystal structure of propionate catabolism operon regulatory protein prpR 2007-04-16 2007-05-22 Ramagopal, U.A.,Toro, R.,Gilmore, M.,Wu, B.,Koss, J.,Groshong, C.,Gheyi, T.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of propionate catabolism operon regulatory protein prpR To be Published 0 0 0 0 2PPG Crystal structure of putative isomerase from Sinorhizobium meliloti 2007-04-30 2007-05-22 Ramagopal, U.A.,Toro, R.,Dickey, M.,Logan, C.,Groshong, C.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of putative isomerase from Sinorhizobium meliloti. To be Published 0 0 0 0 2PWW Crystal structure of ABC2387 from Bacillus clausii 2007-05-14 2007-05-22 Ramagopal, U.A.,Freeman, J.,Lau, C.,Toro, R.,Bain, K.,Rodgers, L.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of ABC2387 from Bacillus clausii. To be Published 0 0 0 0 2P9L Crystal Structure of bovine Arp2/3 complex 2007-03-26 2007-05-29 Nolen, B.J.,Pollard, T.D. Insights into the Influence of Nucleotides on Actin Family Proteins from Seven Structures of Arp2/3 Complex. Mol.Cell 2007 26 449 457 2P9N Crystal Structure of bovine Arp2/3 complex co-crystallized with ADP 2007-03-26 2007-05-29 Nolen, B.J.,Pollard, T.D. Insights into the Influence of Nucleotides on Actin Family Proteins from Seven Structures of Arp2/3 Complex. Mol.Cell 2007 26 449 457 2P9P Crystal Structure of bovine Arp2/3 complex co-crystallized with ADP 2007-03-26 2007-05-29 Nolen, B.J.,Pollard, T.D. Insights into the Influence of Nucleotides on Actin Family Proteins from Seven Structures of Arp2/3 Complex. Mol.Cell 2007 26 449 457 2P9S Structure of bovine Arp2/3 complex co-crystallized with ATP/Mg2+ 2007-03-26 2007-05-29 Nolen, B.J.,Pollard, T.D. Insights into the Influence of Nucleotides on Actin Family Proteins from Seven Structures of Arp2/3 Complex. Mol.Cell 2007 26 449 457 2ED6 Crystal Structure of Envelope Protein VP28 from White Spot Syndrome Virus (WSSV) 2007-02-14 2007-06-05 Tang, X.H.,Wu, J.L.,Sivaraman, J.,Hew, C.L. Crystal Structures of Major Envelope Proteins VP26 and VP28 from White Spot Syndrome Virus Shed Light on Their Evolutionary Relationship J.Virol. 2007 81 6709 6717 2I4T Crystal stucture of Purine Nucleoside Phosphorylase from Trichomonas vaginalis with Imm-A 2006-08-22 2007-06-05 Rinaldo-Matthis, A.,Wing, C.,Ghanem, M.,Deng, H.,Wu, P.,Gupta, A.,Tyler, P.C.,Evans, G.B.,Furneaux, R.H.,Almo, S.C.,Wang, C.C.,Schramm, V.L. Inhibition and structure of Trichomonas vaginalis purine nucleoside phosphorylase with picomolar transition state analogues. Biochemistry 2007 46 659 668 2ISC Crystal stucture of Purine Nucleoside Phosphorylase from Trichomonas vaginalis with DADMe-Imm-A 2006-10-17 2007-06-05 Rinaldo-Matthis, A.,Wing, C.,Ghanem, M.,Deng, H.,Wu, P.,Gupta, A.,Tyler, P.C.,Evans, G.B.,Furneaux, R.H.,Almo, S.C.,Wang, C.C.,Schramm, V.L. Inhibition and structure of Trichomonas vaginalis purine nucleoside phosphorylase with picomolar transition state analogues Biochemistry 2007 46 659 668 2PDR 1.7 Angstrom Crystal Structure of the Photo-excited Blue-light Photoreceptor Vivid 2007-04-01 2007-06-05 Zoltowski, B.D.,Schwerdtfeger, C.,Widom, J.,Loros, J.J.,Bilwes, A.M.,Dunlap, J.C.,Crane, B.R. Conformational switching in the fungal light sensor Vivid Science 2007 316 1054 1057 2PDR 1.7 Angstrom Crystal Structure of the Photo-excited Blue-light Photoreceptor Vivid 2007-04-01 2007-06-05 Zoltowski, B.D.,Schwerdtfeger, C.,Widom, J.,Loros, J.J.,Bilwes, A.M.,Dunlap, J.C.,Crane, B.R. Conformational switching in the fungal light sensor Vivid Science 2007 316 1054 1057 2PDR 1.7 Angstrom Crystal Structure of the Photo-excited Blue-light Photoreceptor Vivid 2007-04-01 2007-06-05 Zoltowski, B.D.,Schwerdtfeger, C.,Widom, J.,Loros, J.J.,Bilwes, A.M.,Dunlap, J.C.,Crane, B.R. Conformational switching in the fungal light sensor Vivid Science 2007 316 1054 1057 2PDR 1.7 Angstrom Crystal Structure of the Photo-excited Blue-light Photoreceptor Vivid 2007-04-01 2007-06-05 Zoltowski, B.D.,Schwerdtfeger, C.,Widom, J.,Loros, J.J.,Bilwes, A.M.,Dunlap, J.C.,Crane, B.R. Conformational switching in the fungal light sensor Vivid Science 2007 316 1054 1057 2Q07 Crystal structure of AF0587, a protein of unknown function 2007-05-21 2007-06-05 Sugadev, R.,Burley, S.K.,Swaminathan, S. Crystal structure of AF0587, a protein of unknown function. To be Published 0 0 0 0 2OS5 Macrophage migration inhibitory factor from Ancylostoma ceylanicum 2007-02-05 2007-06-12 Cho, Y.,Jones, B.F.,Vermeire, J.J.,Leng, L.,DiFedele, L.,Harrison, L.M.,Xiong, H.,Kwong, Y.K.,Chen, Y.,Bucala, R.,Lolis, E.,Cappello, M. Structural and functional characterization of a secreted hookworm Macrophage Migration Inhibitory Factor (MIF) that interacts with the human MIF receptor CD74. J.Biol.Chem. 2007 282 23447 23456 2OS5 Macrophage migration inhibitory factor from Ancylostoma ceylanicum 2007-02-05 2007-06-12 Cho, Y.,Jones, B.F.,Vermeire, J.J.,Leng, L.,DiFedele, L.,Harrison, L.M.,Xiong, H.,Kwong, Y.K.,Chen, Y.,Bucala, R.,Lolis, E.,Cappello, M. Structural and functional characterization of a secreted hookworm Macrophage Migration Inhibitory Factor (MIF) that interacts with the human MIF receptor CD74. J.Biol.Chem. 2007 282 23447 23456 2OJR Structure of ubiquitin solved by SAD using the Lanthanide-Binding Tag 2007-01-13 2007-06-12 Silvaggi, N.R.,Martin, L.J.,Schwalbe, H.,Imperiali, B.,Allen, K.N. Double-Lanthanide-Binding Tags for Macromolecular Crystallographic Structure Determination. J.Am.Chem.Soc. 2007 129 7114 7120 2Q4M Ensemble refinement of the crystal structure of protein from Arabidopsis thaliana At5g01750 2007-05-31 2007-06-19 Levin, E.J.,Kondrashov, D.A.,Wesenberg, G.E.,Phillips, G.N. Ensemble refinement of protein crystal structures: validation and application. Structure 2007 15 1040 1052 2Q4K Ensemble refinement of the protein crystal structure of gene product from Homo sapiens Hs.433573 2007-05-31 2007-06-19 Levin, E.J.,Kondrashov, D.A.,Wesenberg, G.E.,Phillips, G.N. Ensemble refinement of protein crystal structures: validation and application. Structure 2007 15 1040 1052 2HKA Crystal structure of bovine NPC2 and cholesterol sulfate complex 2006-07-03 2007-06-26 Xu, S.,Benoff, B.,Liou, H.-L.,Lobel, P.,Stock, A.M. Structural Basis of Sterol Binding by NPC2, a Lysosomal Protein Deficient in Niemann-Pick Type C2 Disease J.Biol.Chem. 2007 282 23525 23531 2J0L CRYSTAL STRUCTURE OF A THE ACTIVE CONFORMATION OF THE KINASE DOMAIN OF FOCAL ADHESION KINASE WITH A PHOSPHORYLATED ACTIVATION LOOP. 2006-08-03 2007-06-26 Lietha, D.,Cai, X.,Ceccarelli, D.F.J.,Li, Y.,Schaller, M.D.,Eck, M.J. Structural Basis for the Autoinhibition of Focal Adhesion Kinase Cell(Cambridge,Mass.) 2007 129 1177 0 2PKD Crystal structure of CD84: Insite into SLAM family function 2007-04-17 2007-06-26 Yan, Q.,Malashkevich, V.N.,Fedorov, A.,Fedorov, E.,Cao, E.,Lary, J.W.,Cole, J.L.,Nathenson, S.G.,Almo, S.C. Structure of CD84 provides insight into SLAM family function. Proc.Natl.Acad.Sci.Usa 2007 104 10583 10588 2QAH Crystal structure of the 2-pyrone-4,6-dicarboxylic acid hydrolase from Sphingomonas paucimobilis 2007-06-15 2007-06-26 Malashkevich, V.N.,Toro, R.,Bonanno, J.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of the 2-pyrone-4,6-dicarboxylic acid hydrolase from Sphingomonas paucimobilis. To be Published 0 0 0 0 2QDE Crystal structure of mandelate racemase/muconate lactonizing family protein from Azoarcus sp. EbN1 2007-06-20 2007-07-03 Agarwal, R.,Burley, S.K.,Swaminathan, S. Crystal structure of mandelate racemase/muconate lactonizing enzyme family protein from Azoarcus sp. EbN1. To be Published 0 0 0 0 2Q5C Crystal structure of NtrC family transcriptional regulator from Clostridium acetobutylicum 2007-05-31 2007-07-03 Ramagopal, U.A.,Dickey, M.,Toro, R.,Iizuka, M.,Groshong, K.,Rodgers, L.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of NtrC family transcriptional regulator from Clostridium acetobutylicum. To be Published 0 0 0 0 2PJD Crystal structure of 16S rRNA methyltransferase RsmC 2007-04-16 2007-07-03 Sunita, S.,Purta, E.,Durawa, M.,Tkaczuk, K.L.,Swaathi, J.,Bujnicki, J.M.,Sivaraman, J. Functional specialization of domains tandemly duplicated within 16S rRNA methyltransferase RsmC Nucleic Acids Res. 2007 35 4264 4274 2J0M CRYSTAL STRUCTURE A TWO-CHAIN COMPLEX BETWEEN THE FERM AND KINASE DOMAINS OF FOCAL ADHESION KINASE. 2006-08-03 2007-07-03 Lietha, D.,Cai, X.,Li, Y.,Schaller, M.D.,Eck, M.J. Structural Basis for the Autoinhibition of Focal Adhesion Kinase. Cell(Cambridge,Mass.) 2007 129 1177 0 2HSE Structure of D236A E. coli Aspartate Transcarbamoylase in the presence of phosphonoacetamide and l-Aspartate at 2.60 A resolution 2006-07-21 2007-07-17 Wang, J.,Eldo, J.,Kantrowitz, E.R. The allosteric transition induced by the aspartate binding to Aspartate Transcarbamoylase To be Published 0 0 0 0 2QE3 Crystal structure of human tl1a extracellular domain 2007-06-22 2007-07-17 Zhan, C.,Yan, Q.,Patskovsky, Y.,Shi, W.,Toro, R.,Bonanno, J.,NATHENSON, S.G.,Almo, S.C. Crystal Structure of Human Tl1A To be Published 0 0 0 0 2QF9 Crystal structure of putative secreted protein DUF305 from Streptomyces coelicolor 2007-06-27 2007-07-17 Ramagopal, U.A.,Rutter, M.,Adams, J.,Toro, R.,Groshong, C.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Structure of putative secreted protein DUF305 from Streptomyces coelicolor. To be Published 0 0 0 0 2QH0 Crystal structure of a glyoxalase from clostridium acetobutylicum 2007-06-29 2007-07-17 Rao, K.N.,Burley, S.K.,Swaminathan, S. Crystal structure of a glyoxalase from clostridium acetobutylicum. To be Published 0 0 0 0 2Q7G Pyrrolysine tRNA Synthetase bound to a pyrrolysine analogue (cyc) and ATP 2007-06-06 2007-07-24 Kavran, J.M.,Gundllapalli, S.,O'donoghue, P.,Englert, M.,Soll, D.,Steitz, T.A. Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation. Proc.Natl.Acad.Sci.Usa 2007 104 11268 11273 2QGZ Crystal structure of a putative primosome component from Streptococcus pyogenes serotype M3. Northeast Structural Genomics target DR58 2007-06-29 2007-07-24 Seetharaman, J.,Chen, Y.,Wang, D.,Fang, Y.,Cunningham, K.,Ma, L-C.,Xia, R.,Liu, J.,Baran, M.C.,Acton, T.B.,Rost, B.,Montelione, G.T.,Hunt, J.F.,Tong, L. Crystal structure of a putative primosome component from Streptococcus pyogenes serotype M3. To be Published 0 0 0 0 2QKP Crystal structure of C-terminal domain of SMU_1151c from Streptococcus mutans 2007-07-11 2007-07-24 Ramagopal, U.A.,Toro, R.,Gilmore, M.,Wu, B.,Bain, K.,Gheyi, T.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Structure of C-terminal domain of SMU_1151c from Streptococcus mutans. To be Published 0 0 0 0 2PQW Crystal structure of L3MBTL1 in complex with H4K20Me2 (residues 17-25), trigonal form 2007-05-02 2007-07-31 Min, J.,Allali-Hassani, A.,Nady, N.,Qi, C.,Ouyang, H.,Liu, Y.,MacKenzie, F.,Vedadi, M.,Arrowsmith, C.H. L3MBTL1 recognition of mono- and dimethylated histones. Nat.Struct.Mol.Biol. 2007 14 1229 1230 2QGO Crystal structure of a putative Fe-S biosynthesis protein from Lactobacillus acidophilus 2007-06-29 2007-07-31 Agarwal, R.,Burley, S.K.,Swaminathan, S. Structural analysis of Fe-S cluster proteins. To be Published 0 0 0 0 2PLL Crystal structure of perdeuterated human arginase I 2007-04-19 2007-08-14 Di Costanzo, L.,Moulin, M.,Haertlein, M.,Meilleur, F.,Christianson, D.W. Expression, purification, assay, and crystal structure of perdeuterated human arginase I Arch.Biochem.Biophys. 2007 465 82 89 2QR4 Crystal structure of oligoendopeptidase-F from Enterococcus faecium 2007-07-27 2007-08-14 Ramagopal, U.A.,Toro, R.,Meyer, A.J.,Freeman, J.,Bain, K.,Rodgers, L.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of oligoendopeptidase-F from Enterococcus faecium. To be Published 0 0 0 0 2P7V Crystal structure of the Escherichia coli regulator of sigma 70, Rsd, in complex with sigma 70 domain 4 2007-03-20 2007-08-21 Patikoglou, G.A.,Westblade, L.F.,Campbell, E.A.,Lamour, V.,Lane, W.J.,Darst, S.A. Crystal structure of the Escherichia coli regulator of sigma70, Rsd, in complex with sigma70 domain 4. J.Mol.Biol. 2007 372 649 659 2Q72 Crystal Structure Analysis of LeuT complexed with L-leucine, sodium, and imipramine 2007-06-05 2007-08-21 Singh, S.K.,Yamashita, A.,Gouaux, E. Antidepressant binding site in a bacterial homologue of neurotransmitter transporters. Nature 2007 448 952 956 2QAP Fructose-1,6-bisphosphate aldolase from Leishmania mexicana 2007-06-15 2007-08-21 Lafrance-Vanasse, J.,Sygusch, J. Carboxy-Terminus Recruitment Induced by Substrate Binding in Eukaryotic Fructose Bis-phosphate Aldolases Biochemistry 2007 46 9533 9540 2QB4 Crystal Structure Analysis of LeuT complexed with L-leucine, sodium and desipramine 2007-06-15 2007-08-21 Singh, S.K.,Yamashita, A.,Gouaux, E. Antidepressant binding site in a bacterial homologue of neurotransmitter transporters. Nature 2007 448 952 956 2QDG Fructose-1,6-bisphosphate Schiff base intermediate in FBP aldolase from Leishmania mexicana 2007-06-20 2007-08-21 Lafrance-Vanasse, J.,Sygusch, J. Carboxy-Terminus Recruitment Induced by Substrate Binding in Eukaryotic Fructose Bis-phosphate Aldolases Biochemistry 2007 46 9533 9540 2QDH Fructose-1,6-bisphosphate aldolase from Leishmania mexicana in complex with mannitol-1,6-bisphosphate, a competitive inhibitor 2007-06-20 2007-08-21 Lafrance-Vanasse, J.,Sygusch, J. Carboxy-Terminus Recruitment Induced by Substrate Binding in Eukaryotic Fructose Bis-phosphate Aldolases Biochemistry 2007 46 9533 9540 2QJU Crystal Structure of an NSS Homolog with Bound Antidepressant 2007-07-09 2007-08-21 Zhou, Z.,Zhen, J.,Karpowich, N.K.,Goetz, R.M.,Law, C.J.,Reith, M.E.,Wang, D.N. LeuT-desipramine structure reveals how antidepressants block neurotransmitter reuptake. Science 2007 317 1390 1393 2QS8 Crystal structure of a Xaa-Pro dipeptidase with bound methionine in the active site 2007-07-30 2007-08-21 Kumaran, D.,Mahmood, A.,Levia, J.,Brown, A.C.,Burley, S.K.,Swaminathan, S. Crystal Structure of Xaa-Pro dipeptidase with bound methionine in the active site. To be Published 0 0 0 0 2Q66 Structure of Yeast Poly(A) Polymerase with ATP and oligo(A) 2007-06-04 2007-08-28 Balbo, P.B.,Bohm, A. Mechanism of poly(A) polymerase: structure of the enzyme-MgATP-RNA ternary complex and kinetic analysis. Structure 2007 15 1117 1131 2QKS Crystal structure of a Kir3.1-prokaryotic Kir channel chimera 2007-07-11 2007-08-28 Nishida, M.,Cadene, M.,Chait, B.T.,Mackinnon, R. Crystal structure of a Kir3.1-prokaryotic Kir channel chimera. Embo J. 2007 26 4005 4015 2QVC Crystal structure of a periplasmic sugar ABC transporter from Thermotoga maritima 2007-08-08 2007-08-28 Palani, K.,Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure of a periplasmic sugar ABC transporter from Thermotoga maritima. To be Published 0 0 0 0 2QVG The crystal structure of a two-component response regulator from Legionella pneumophila 2007-08-08 2007-08-28 Tyagi, R.,Eswaramoorthy, S.,Burley, S.K.,Swaminathan, S. The crystal structure of a two-component response regulator from Legionella pneumophila. To be Published 0 0 0 0 2QVH Crystal structure of O-succinylbenzoate synthase complexed with O-succinyl benzoate (OSB) 2007-08-08 2007-08-28 Sugadev, R.,Burley, S.K.,Swaminathan, S. Crystal structure of O-succinylbenzoate synthase complexed with O-succinyl benzoate. To be Published 0 0 0 0 2QYZ Crystal structure of the uncharacterized protein CTC02137 from Clostridium tetani E88 2007-08-15 2007-08-28 Malashkevich, V.N.,Toro, R.,Meyer, A.J.,Sauder, J.M.,Wasserman, T.,Burley, S.K.,Almo, S.C. Crystal structure of the uncharacterized protein CTC02137 from Clostridium tetani E88. To be Published 0 0 0 0 2QZB Crystal structure of the uncharacterized protein yfeY from Escherichia coli 2007-08-16 2007-08-28 Bonanno, J.B.,Gilmore, M.,Bain, K.T.,Wu, B.,Romero, R.,Smith, D.,Wasserman, S.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of the uncharacterized protein yfeY from Escherichia coli. To be Published 0 0 0 0 2R5X Crystal structure of uncharacterized conserved protein YugN from Geobacillus kaustophilus HTA426 2007-09-04 2007-09-11 Ramagopal, U.A.,Patskovsky, Y.,Shi, W.,Toro, R.,Meyer, A.J.,Freeman, J.,Wu, B.,Koss, J.,Groshong, C.,Rodgers, L.,Wasserman, S.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of uncharacterized protein YugN from Geobacillus kaustophilus HTA426. To be Published 0 0 0 0 2PWM Crystal Structure of HIV-1 CA146 A92E real cell 2007-05-11 2007-09-25 Kelly, B.N.,Kyere, S.,Kinde, I.,Tang, C.,Howard, B.R.,Robinson, H.,Sundquist, W.I.,Summers, M.F.,Hill, C.P. Structure of the Antiviral Assembly Inhibitor CAP-1 Complex with the HIV-1 CA Protein. J.Mol.Biol. 2007 373 355 366 2PWO Crystal Structure of HIV-1 CA146 A92E Psuedo Cell 2007-05-11 2007-09-25 Kelly, B.N.,Kyere, S.,Kinde, I.,Tang, C.,Howard, B.R.,Robinson, H.,Sundquist, W.I.,Summers, M.F.,Hill, C.P. Structure of the Antiviral Assembly Inhibitor CAP-1 Complex with the HIV-1 CA Protein. J.Mol.Biol. 2007 373 355 366 2O5N Crystal structure of a Viral Glycoprotein 2006-12-06 2007-09-25 Mans, J.,Natarajan, K.,Balbo, A.,Schuck, P.,Eikel, D.,Hess, S.,Robinson, H.,Simic, H.,Jonjic, S.,Tiemessen, C.T.,Margulies, D.H. Cellular Expression and Crystal Structure of the Murine Cytomegalovirus Major Histocompatibility Complex Class I-like Glycoprotein, m153. J.Biol.Chem. 2007 282 35247 35258 2QHO Crystal structure of the UBA domain from EDD ubiquitin ligase in complex with ubiquitin 2007-07-02 2007-09-25 Kozlov, G.,Nguyen, L.,Lin, T.,De Crescenzo, G.,Park, M.,Gehring, K. Structural basis of ubiquitin recognition by the ubiquitin-associated (UBA) domain of the ubiquitin ligase EDD. J.Biol.Chem. 2007 282 35787 35795 2QLV Crystal structure of the heterotrimer core of the S. cerevisiae AMPK homolog SNF1 2007-07-13 2007-09-25 Amodeo, G.A.,Rudolph, M.J.,Tong, L. Crystal structure of the heterotrimer core of Saccharomyces cerevisiae AMPK homologue SNF1. Nature 2007 449 492 495 2OPN Human Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-527 2007-01-29 2007-10-02 Zhang, Y.,Cao, R.,Leon, A.,Guo, R.T.,Krysiak, K.,Yin, F.,Hudock, M.P.,Mukherjee, S.,Gao, Y.G.,Robinson, H.,Song, Y.,No, J.H.,Hong, W.,Morita, C.,Wang, A.H.-J.,Oldfield, E. Bisphosphonates: Teaching Old Drugs with New Tricks To be Published 0 0 0 0 2QL6 human nicotinamide riboside kinase (NRK1) 2007-07-12 2007-10-02 Khan, J.A.,Xiang, S.,Tong, L. Crystal structure of human nicotinamide riboside kinase Structure 2007 15 1005 1013 2R9G Crystal structure of the C-terminal fragment of AAA ATPase from Enterococcus faecium 2007-09-12 2007-10-02 Ramagopal, U.A.,Patskovsky, Y.,Bonanno, J.B.,Shi, W.,Toro, R.,Meyer, A.J.,Rutter, M.,Wu, B.,Groshong, C.,Gheyi, T.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal Structure of the C-Terminal Domain of AAA ATPase from Enterococcus faecium. To be Published 0 0 0 0 2RDM Crystal structure of response regulator receiver protein from Sinorhizobium medicae WSM419 2007-09-24 2007-10-09 Patskovsky, Y.,Yan, Q.,Zhan, C.,Toro, R.,Meyer, A.J.,Gilmore, M.,Hu, S.,Groshong, C.,Rodgers, L.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of response regulator receiver protein from Sinorhizobium medicae WSM419. To be Published 0 0 0 0 2QHD Crystal structure of ecarpholin S (ser49-PLA2) complexed with fatty acid 2007-07-02 2007-10-16 Zhou, X.,Tan, T.C.,Valiyaveettil, S.,Go, M.L.,Kini, R.M.,Velazquez-Campoy, A.,Sivaraman, J. Structural Characterization of Myotoxic Ecarpholin S from Echis carinatus Venom Biophys.J. 2008 95 3366 3380 2RBB Crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase family enzyme from Burkholderia phytofirmans PsJN 2007-09-18 2007-10-16 Rao, K.N.,Sauder, J.M.,Burley, S.K.,Swaminathan, S. Crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase family enzyme from Burkholderia phytofirmans PsJN. To be Published 0 0 0 0 2RGY Crystal structure of transcriptional regulator of LacI family from Burkhoderia phymatum 2007-10-05 2007-10-23 Agarwal, R.,Burley, S.K.,Swaminathan, S. Structural analysis of transcription regulator of LacI family from Burkholderia phymatum. To be Published 0 0 0 0 2RG4 Crystal structure of the uncharacterized protein Q2CBJ1_9RHOB from Oceanicola granulosus HTCC2516 2007-10-02 2007-10-23 Malashkevich, V.N.,Toro, R.,Meyer, A.J.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of the uncharacterized protein Q2CBJ1_9RHOB from Oceanicola granulosus HTCC2516. To be Published 0 0 0 0 2PW3 Structure of the PDE4D-cAMP complex 2007-05-10 2007-10-23 Wang, H.,Robinson, H.,Ke, H. The molecular basis for different recognition of substrates by phosphodiesterase families 4 and 10. J.Mol.Biol. 2007 371 302 307 2RJO Crystal structure of Twin-arginine translocation pathway signal protein from Burkholderia phytofirmans 2007-10-15 2007-10-23 Agarwal, R.,Burley, S.K.,Swaminathan, S. Crystal structure of twin-arginine translocation pathway signal protein from Burkholderia phytofirmans. To be Published 0 0 0 0 2RJN Crystal structure of an uncharacterized protein Q2BKU2 from Neptuniibacter caesariensis 2007-10-15 2007-10-23 Malashkevich, V.N.,Toro, R.,Meyer, A.J.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of an uncharacterized protein Q2BKU2 from Neptuniibacter caesariensis. To be Published 0 0 0 0 3B2N Crystal structure of DNA-binding response regulator, LuxR family, from Staphylococcus aureus 2007-10-18 2007-10-30 Malashkevich, V.N.,Toro, R.,Meyer, A.J.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of DNA-binding response regulator, LuxR family, from Staphylococcus aureus. To be Published 0 0 0 0 2RK9 The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase superfamily member from Vibrio splendidus 12B01 2007-10-16 2007-10-30 Tyagi, R.,Eswaramoorthy, S.,Sauder, J.M.,Burley, S.K.,Swaminathan, S. The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase superfamily member from Vibrio splendidus 12B01. To be Published 0 0 0 0 2RK0 Crystal structure of glyoxylase/bleomycin resistance protein/dioxygenase domain from Frankia sp. EAN1pec 2007-10-16 2007-10-30 Sugadev, R.,Burley, S.K.,Swaminathan, S. Crystal structure of glyoxylase/bleomycin resistance protein/dioxygenase domain from Frankia sp. EAN1pec. To be Published 0 0 0 0 2Q1M Crystal Structure of human GITRL 2007-05-24 2007-11-13 Chattopadhyay, K.,Ramagopal, U.A.,Nathenson, S.G.,Almo, S.C. Crystal Structure of human GITRL To be Published 0 0 0 0 2PTV Structure of NK cell receptor ligand CD48 2007-05-08 2007-11-20 Velikovsky, C.A.,Deng, L.,Chlewicki, L.K.,Fernandez, M.M.,Kumar, V.,Mariuzza, R.A. Structure of natural killer receptor 2B4 bound to CD48 reveals basis for heterophilic recognition in signaling lymphocyte activation molecule family. Immunity 2007 27 572 584 2R9H Crystal Structure of Q207C Mutant of CLC-ec1 in complex with Fab 2007-09-12 2007-11-20 Miller, C.,Nguitragool, W. Crystal Structure of Q207C Mutant of CLC-ec1 in complex with Fab To be Published 0 0 0 0 2R32 Crystal Structure of human GITRL variant 2007-08-28 2007-11-20 Chattopadhyay, K.,Ramagopal, U.A.,Nathenson, S.G.,Almo, S.C. Crystal Structure of human GITRL variant To be Published 0 0 0 0 2PJO Ricin a-chain (recombinant) complex with n-methylurea 2007-04-16 2007-11-20 Carra, J.H.,McHugh, C.A.,Mulligan, S.,Machiesky, L.M.,Soares, A.S.,Millard, C.B. Fragment-based identification of determinants of conformational and spectroscopic change at the ricin active site. Bmc Struct.Biol. 2007 7 72 72 2PTT Structure of NK cell receptor 2B4 (CD244) bound to its ligand CD48 2007-05-08 2007-11-20 Velikovsky, C.A.,Deng, L.,Chlewicki, L.K.,Fernandez, M.M.,Kumar, V.,Mariuzza, R.A. Structure of natural killer receptor 2B4 bound to CD48 reveals basis for heterophilic recognition in signaling lymphocyte activation molecule family. Immunity 2007 27 572 584 2R9R Shaker family voltage dependent potassium channel (kv1.2-kv2.1 paddle chimera channel) in association with beta subunit 2007-09-13 2007-11-20 Long, S.B.,Tao, X.,Campbell, E.B.,MacKinnon, R. Atomic structure of a voltage-dependent K+ channel in a lipid membrane-like environment. Nature 2007 450 376 382 2RB8 High resolution design of a protein loop 2007-09-18 2007-11-20 Hu, X.,Wang, H.,Ke, H.,Kuhlman, B. High-resolution design of a protein loop. Proc.Natl.Acad.Sci.Usa 2007 104 17668 17673 2PTU Structure of NK cell receptor 2B4 (CD244) 2007-05-08 2007-11-20 Velikovsky, C.A.,Deng, L.,Chlewicki, L.K.,Fernandez, M.M.,Kumar, V.,Mariuzza, R.A. Structure of natural killer receptor 2B4 bound to CD48 reveals basis for heterophilic recognition in signaling lymphocyte activation molecule family. Immunity 2007 27 572 584 3B89 Crystal structure of rRNA methylase from Escherichia coli 2007-10-31 2007-11-27 Eswaramoorthy, S.,Burley, S.K.,Swaminathan, S. Crystal structure of rRNA methylase from Escherichia coli. To be Published 0 0 0 0 3BBL Crystal structure of a regulatory protein of LacI family from Chloroflexus aggregans 2007-11-09 2007-11-27 Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure of a regulatory protein of LacI family from the Chloroflexus aggregans. To be Published 0 0 0 0 3BCV Crystal structure of a putative glycosyltransferase from Bacteroides fragilis 2007-11-13 2007-11-27 Palani, K.,Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure of a putative glycosyltransferase from Bacteroides fragilis. To be Published 0 0 0 0 3BE7 Crystal structure of Zn-dependent arginine carboxypeptidase 2007-11-16 2007-11-27 Patskovsky, Y.,Ramagopal, U.A.,Toro, R.,Meyer, A.J.,Freeman, J.,Iizuka, M.,Bain, K.,Rodgers, L.,Raushel, F.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of arginine carboxypeptidase. To be Published 0 0 0 0 2R0D Crystal Structure of Autoinhibited Form of Grp1 Arf GTPase Exchange Factor 2007-08-18 2007-12-04 Dinitto, J.P.,Delprato, A.,Gabe Lee, M.T.,Cronin, T.C.,Huang, S.,Guilherme, A.,Czech, M.P.,Lambright, D.G. Structural Basis and Mechanism of Autoregulation in 3-Phosphoinositide-Dependent Grp1 Family Arf GTPase Exchange Factors. Mol.Cell 2007 28 569 583 2R2N The crystal structure of human kynurenine aminotransferase II in complex with kynurenine 2007-08-27 2007-12-04 Han, Q.,Robinson, H.,Li, J. Crystal structure of human kynurenine aminotransferase II. J.Biol.Chem. 2008 283 3567 3573 2QLR Crystal structure of human kynurenine aminotransferase II 2007-07-13 2007-12-04 Han, Q.,Robinson, H.,Li, J. Crystal Structure of Human Kynurenine Aminotransferase II J.Biol.Chem. 2008 283 3567 3573 3BCH Crystal Structure of the Human Laminin Receptor Precursor 2007-11-12 2007-12-04 Jamieson, K.V.,Wu, J.,Hubbard, S.R.,Meruelo, D. Crystal structure of the human laminin receptor precursor. J.Biol.Chem. 2008 283 3002 3005 2OPM Human Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-461 2007-01-29 2007-12-11 Zhang, Y.,Cao, R.,Leon, A.,Guo, R.T.,Krysiak, K.,Yin, F.,Hudock, M.P.,Mukherjee, S.,Gao, Y.G.,Robinson, H.,Song, Y.,No, J.H.,Hong, W.,Morita, C.,Wang, A.H.-J.,Oldfield, E. Bisphosphonates: Teaching Old Drugs with New Tricks To be Published 0 0 0 0 3BGA Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 2007-11-26 2007-12-11 Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure analysis of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482. To be Published 0 0 0 0 2O5F Crystal Structure of DR0079 from Deinococcus radiodurans at 1.9 Angstrom Resolution 2006-12-05 2007-12-18 Buchko, G.W.,Litvinova, O.,Robinson, H.,Yakunin, A.F.,Kennedy, M.A. Functional and Structural Characterization of DR_0079 from Deinococcus radiodurans, a Novel Nudix Hydrolase with a Preference for Cytosine (Deoxy)ribonucleoside 5'-Di- and Triphosphates. Biochemistry 2008 47 6571 6582 2O6W Crystal Structure of a Pentapeptide Repeat Protein (Rfr23) from the cyanobacterium Cyanothece 51142 2006-12-08 2007-12-18 Buchko, G.W.,Robinson, H.,Pakrasi, H.B.,Kennedy, M.A. Insights into the structural variation between pentapeptide repeat proteins-Crystal structure of Rfr23 from Cyanothece 51142. J.Struct.Biol. 2008 162 184 192 2QUD PP7 Coat Protein Dimer 2007-08-04 2007-12-18 Chao, J.A.,Patskovsky, Y.,Almo, S.C.,Singer, R.H. Structural basis for the coevolution of a viral RNA-protein complex. Nat.Struct.Mol.Biol. 2008 15 103 105 2OFM 1.11 A Crystal Structure of Apo Nitrophorin 4 From Rhodnius Prolixus 2007-01-03 2007-12-18 Amoia, A.M.,Montfort, W.R. Apo-nitrophorin 4 at atomic resolution. Protein Sci. 2007 16 2076 2081 2R8Q Structure of LmjPDEB1 in complex with IBMX 2007-09-11 2007-12-18 Wang, H.,Yan, Z.,Geng, J.,Kunz, S.,Seebeck, T.,Ke, H. Crystal structure of the Leishmania major phosphodiesterase LmjPDEB1 and insight into the design of the parasite-selective inhibitors. Mol.Microbiol. 2007 66 1029 1038 2RD0 Structure of a human p110alpha/p85alpha complex 2007-09-20 2007-12-25 Huang, C.H.,Mandelker, D.,Schmidt-Kittler, O.,Samuels, Y.,Velculescu, V.E.,Kinzler, K.W.,Vogelstein, B.,Gabelli, S.B.,Amzel, L.M. The structure of a human p110alpha/p85alpha complex elucidates the effects of oncogenic PI3Kalpha mutations. Science 2007 318 1744 1748 3BGE Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae 2007-11-26 2008-01-01 Ramagopal, U.A.,Patskovsky, Y.,Bonanno, J.B.,Meyer, A.J.,Toro, R.,Freeman, J.,Adams, J.,Koss, J.,Maletic, M.,Gheyi, T.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae. To be Published 0 0 0 0 3BGS Structure of human purine nucleoside phosphorylase with L-DADMe-ImmH and phosphate 2007-11-27 2008-01-08 Rinaldo-Matthis, A.,Murkin, A.S.,Ramagopal, U.A.,Clinch, K.,Mee, S.P.,Evans, G.B.,Tyler, P.C.,Furneaux, R.H.,Almo, S.C.,Schramm, V.L. L-Enantiomers of transition state analogue inhibitors bound to human purine nucleoside phosphorylase J.Am.Chem.Soc. 2008 130 842 844 3B4R Site-2 Protease from Methanocaldococcus jannaschii 2007-10-24 2008-01-15 Feng, L.,Yan, H.,Wu, Z.,Yan, N.,Wang, Z.,Jeffrey, P.D.,Shi, Y. Structure of a site-2 protease family intramembrane metalloprotease. Science 2007 318 1608 1612 3B4R Site-2 Protease from Methanocaldococcus jannaschii 2007-10-24 2008-01-15 Feng, L.,Yan, H.,Wu, Z.,Yan, N.,Wang, Z.,Jeffrey, P.D.,Shi, Y. Structure of a site-2 protease family intramembrane metalloprotease. Science 2007 318 1608 1612 3BEH Structure of a Bacterial Cyclic Nucleotide Regulated Ion Channel 2007-11-18 2008-01-15 Clayton, G.M.,Altieri, S.,Heginbotham, L.,Unger, V.M.,Morais-Cabral, J.H. Ion Channel To be Published 0 0 0 0 2V0L CHARACTERIZATION OF SUBSTRATE BINDING AND CATALYSIS OF THE POTENTIAL ANTIBACTERIAL TARGET N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLTRANSFERASE (GLMU) 2007-05-14 2008-01-15 Mochalkin, I.,Lightle, S.,Zhu, Y.,Ohren, J.F.,Spessard, C.,Chirgadze, N.Y.,Banotai, C.,Melnick, M.,Mcdowell, L. Characterization of Substrate Binding and Catalysis in the Potential Antibacterial Target N-Acetylglucosamine-1-Phosphate Uridyltransferase (Glmu). Protein Sci. 2007 16 2657 0 2P4S Structure of Purine Nucleoside Phosphorylase from Anopheles gambiae in complex with DADMe-ImmH 2007-03-13 2008-01-15 Taylor, E.A.,Rinaldo-Matthis, A.,Li, L.,Ghanem, M.,Hazleton, K.Z.,Cassera, M.B.,Almo, S.C.,Schramm, V.L. Anopheles gambiae purine nucleoside phosphorylase: catalysis, structure, and inhibition. Biochemistry 2007 46 12405 12415 2Q7O Structure of human purine nucleoside phosphorylase in complex with L-Immucillin-H 2007-06-07 2008-01-15 Rinaldo-Matthis, A.,Murkin, A.S.,Ramagopal, U.A.,Clinch, K.,Mee, S.P.,Evans, G.B.,Tyler, P.C.,Furneaux, R.H.,Almo, S.C.,Schramm, V.L. L-Enantiomers of transition state analogue inhibitors bound to human purine nucleoside phosphorylase. J.Am.Chem.Soc. 2008 130 842 844 3B45 Crystal structure of GlpG at 1.9A resolution 2007-10-23 2008-01-22 Wang, Y.,Maegawa, S.,Akiyama, Y.,Ha, Y. The role of L1 loop in the mechanism of rhomboid intramembrane protease GlpG. J.Mol.Biol. 2007 374 1104 1113 3BOB Carbonic anhydrase from marine diatom Thalassiosira weissflogii- cadmium bound domain 2 2007-12-17 2008-01-22 Xu, Y.,Feng, L.,Jeffrey, P.D.,Shi, Y.,Morel, F.M. Structure and metal exchange in the cadmium carbonic anhydrase of marine diatoms. Nature 2008 452 56 61 3B8O Structure of WzzE- Bacterial Polysaccharide Co-polymerase 2007-11-01 2008-01-22 Tocilj, A.,Munger, C.,Proteau, A.,Morona, R.,Purins, L.,Ajamian, E.,Wagner, J.,Papadopoulos, M.,Van Den Bosch, L.,Rubinstein, J.L.,Fethiere, J.,Matte, A.,Cygler, M. Bacterial polysaccharide co-polymerases share a common framework for control of polymer length Nat.Struct.Mol.Biol. 2008 15 130 138 3B8P Fragment of WzzB, Polysaccharide Co-polymerase from Salmonella Typhimurium 2007-11-01 2008-01-22 Tocilj, A.,Munger, C.,Proteau, A.,Morona, R.,Purins, L.,Ajamian, E.,Wagner, J.,Papadopoulos, M.,Van Den Bosch, L.,Rubinstein, J.L.,Fethiere, J.,Matte, A.,Cygler, M. 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Nature 2008 452 56 61 3B6W Crystal Structure of the GLUR2 Ligand Binding Core (S1S2J) T686S Mutant in Complex with Glutamate at 1.7 Resolution 2007-10-29 2008-02-05 Zhang, W.,Cho, Y.,Lolis, E.,Howe, J.R. Structural and single-channel results indicate that the rates of ligand binding domain closing and opening directly impact AMPA receptor gating. J.Neurosci. 2008 28 932 943 3C3M Crystal structure of the N-terminal domain of response regulator receiver protein from Methanoculleus marisnigri JR1 2008-01-28 2008-02-05 Patskovsky, Y.,Ramagopal, U.A.,Toro, R.,Meyer, A.J.,Dickey, M.,Chang, S.,Groshong, C.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of the N-terminal domain of response regulator receiver protein from Methanoculleus marisnigri JR1. To be Published 0 0 0 0 3BLX Yeast Isocitrate Dehydrogenase (Apo Form) 2007-12-11 2008-02-05 Taylor, A.B.,Hu, G.,Hart, P.J.,McAlister-Henn, L. Allosteric Motions in Structures of Yeast NAD+-specific Isocitrate Dehydrogenase. J.Biol.Chem. 2008 283 10872 10880 3BZW Crystal structure of a putative lipase from Bacteroides thetaiotaomicron 2008-01-18 2008-02-05 Palani, K.,Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure of a putative lipase from Bacteroides thetaiotaomicron. To be Published 0 0 0 0 3C3K Crystal structure of an uncharacterized protein from Actinobacillus succinogenes 2008-01-28 2008-02-05 Malashkevich, V.N.,Toro, R.,Meyer, A.J.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of an uncharacterized protein from Actinobacillus succinogenes. To be Published 0 0 0 0 2RF3 Crystal Structure of Tricyclo-DNA: An Unusual Compensatory Change of Two Adjacent Backbone Torsion Angles 2007-09-27 2008-02-12 Pallan, P.S.,Ittig, D.,Heroux, A.,Wawrzak, Z.,Leumann, C.J.,Egli, M. Crystal structure of tricyclo-DNA: an unusual compensatory change of two adjacent backbone torsion angles. Chem.Commun.(Camb.) 2008 0 883 885 3C5K Crystal structure of human HDAC6 zinc finger domain 2008-01-31 2008-02-19 Dong, A.,Ravichandran, M.,Schuetz, A.,Loppnau, P.,Li, Y.,MacKenzie, F.,Kozieradzki, I.,Edwards, A.M.,Arrowsmith, C.H.,Weigelt, J.,Bountra, C.,Bochkarev, A.,Dhe-Paganon, S.,Min, J.,Ouyang, H. Crystal Structure of Human HDAC6 zinc finger domain. To be Published 0 0 0 0 3BG3 Crystal Structure of Human Pyruvate Carboxylase (missing the biotin carboxylase domain at the N-terminus) 2007-11-26 2008-02-26 Xiang, S.,Tong, L. Crystal structures of human and Staphylococcus aureus pyruvate carboxylase and molecular insights into the carboxyltransfer reaction. Nat.Struct.Mol.Biol. 2008 15 295 302 3BUM Crystal structure of c-Cbl-TKB domain complexed with its binding motif in Sprouty2 2008-01-03 2008-02-26 Ng, C.,Jackson, R.A.,Buschdorf, J.P.,Sun, Q.,Guy, G.R.,Sivaraman, J. Structural basis for a novel intrapeptidyl H-bond and reverse binding of c-Cbl-TKB domain substrates Embo J. 2008 27 804 816 3BUN Crystal structure of c-Cbl-TKB domain complexed with its binding motif in Sprouty4 2008-01-03 2008-02-26 Ng, C.,Jackson, R.A.,Buschdorf, J.P.,Sun, Q.,Guy, G.R.,Sivaraman, J. Structural basis for a novel intrapeptidyl H-bond and reverse binding of c-Cbl-TKB domain substrates Embo J. 2008 27 804 816 3BUO Crystal structure of c-Cbl-TKB domain complexed with its binding motif in EGF receptor' 2008-01-03 2008-02-26 Ng, C.,Jackson, R.A.,Buschdorf, J.P.,Sun, Q.,Guy, G.R.,Sivaraman, J. Structural basis for a novel intrapeptidyl H-bond and reverse binding of c-Cbl-TKB domain substrates Embo J. 2008 27 804 816 3BUW Crystal structure of c-Cbl-TKB domain complexed with its binding motif in Syk 2008-01-03 2008-02-26 Ng, C.,Jackson, R.A.,Buschdorf, J.P.,Sun, Q.,Guy, G.R.,Sivaraman, J. Structural basis for a novel intrapeptidyl H-bond and reverse binding of c-Cbl-TKB domain substrates Embo J. 2008 27 804 816 3BUX Crystal structure of c-Cbl-TKB domain complexed with its binding motif in c-Met 2008-01-03 2008-02-26 Ng, C.,Jackson, R.A.,Buschdorf, J.P.,Sun, Q.,Guy, G.R.,Sivaraman, J. Structural basis for a novel intrapeptidyl H-bond and reverse binding of c-Cbl-TKB domain substrates Embo J. 2008 27 804 816 3B2T Structure of phosphotransferase 2007-10-19 2008-02-26 Lew, E.D.,Bae, J.H.,Rohmann, E.,Wollnik, B.,Schlessinger, J. Structural basis for reduced FGFR2 activity in LADD syndrome: Implications for FGFR autoinhibition and activation. Proc.Natl.Acad.Sci.Usa 2007 104 19802 19807 3BTS Crystal structure of a ternary complex of the transcriptional repressor Gal80p (Gal80S0 [G301R]) and the acidic activation domain of Gal4p (aa 854-874) from Saccharomyces cerevisiae with NAD 2007-12-30 2008-03-04 Kumar, P.R.,Yu, Y.,Sternglanz, R.,Johnston, S.A.,Joshua-Tor, L. NADP regulates the yeast GAL induction system. Science 2008 319 1090 1092 2VOF STRUCTURE OF MOUSE A1 BOUND TO THE PUMA BH3-DOMAIN 2008-02-17 2008-03-04 Smits, C.,Czabotar, P.E.,Hinds, M.G.,Day, C.L. Structural Plasticity Underpins Promiscuous Binding of the Prosurvival Protein A1. Structure 2008 16 818 0 2QCY Crystal Structure of a monomeric form of Severe Acute Respiratory Syndrome (SARS) 3C-like protease mutant 2007-06-20 2008-03-11 Shi, J.,Sivaraman, J.,Song, J. Mechanism for Controlling Dimer-monomer Switch and Coupling Dimerization to Catalysis of the SARS-CoV 3C-Like Protease. J.Virol. 2008 0 0 0 2R5C Aedes Kynurenine Aminotransferase in Complex with Cysteine 2007-09-03 2008-03-18 Han, Q.,Gao, Y.G.,Robinson, H.,Li, J. Structural insight into the mechanism of substrate specificity of aedes kynurenine aminotransferase. Biochemistry 2008 47 1622 1630 3CAX Crystal structure of uncharacterized protein PF0695 2008-02-20 2008-03-18 Ramagopal, U.A.,Hu, S.,Toro, R.,Gilmore, M.,Bain, K.,Meyer, A.J.,Rodgers, L.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of uncharacterized protein PF0695. To be Published 0 0 0 0 2R5E Aedes kynurenine aminotransferase in complex with glutamine 2007-09-03 2008-03-18 Han, Q.,Gao, Y.G.,Robinson, H.,Li, J. Structural insight into the mechanism of substrate specificity of aedes kynurenine aminotransferase. Biochemistry 2008 47 1622 1630 3CK5 Crystal structure of a racemase from Streptomyces coelicolor A3(2) with bound magnesium 2008-03-14 2008-03-25 Rao, K.N.,Burley, S.K.,Swaminathan, S. Crystal structure of a racemase from Streptomyces coelicolor A3(2) with bound magnesium. To be Published 0 0 0 0 3CJP Crystal structure of an uncharacterized amidohydrolase CAC3332 from Clostridium acetobutylicum 2008-03-13 2008-03-25 Malashkevich, V.N.,Toro, R.,Ramagopal, U.A.,Bonanno, J.B.,Meyer, A.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of an uncharacterized amidohydrolase CAC3332 from Clostridium acetobutylicum. To be Published 0 0 0 0 2QY2 Characterization of a trifunctional mimivirus mRNA capping enzyme and crystal structure of the RNA triphosphatase domainm. 2007-08-13 2008-04-01 Benarroch, D.,Smith, P.,Shuman, S. Characterization of a trifunctional mimivirus mRNA capping enzyme and crystal structure of the RNA triphosphatase domain. Structure 2008 16 501 512 3BGY Triclinic structure of Mimivirus Capping Enzyme Triphosphatase at 1.65 A 2007-11-27 2008-04-01 Benarroch, D.,Smith, P.,Shuman, S. Triclinic structure of Mimivirus Capping Enzyme Triphosphatase at 1.65 A To be Published 0 0 0 0 3BUV Crystal structure of human Delta(4)-3-ketosteroid 5-beta-reductase in complex with NADP and HEPES. Resolution: 1.35 A. 2008-01-03 2008-04-01 Di Costanzo, L.,Drury, J.E.,Penning, T.M.,Christianson, D.W. Crystal Structure of Human Liver {Delta}4-3-Ketosteroid 5{beta}-Reductase (AKR1D1) and Implications for Substrate Binding and Catalysis. J.Biol.Chem. 2008 283 16830 16839 3CIH Crystal structure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron 2008-03-11 2008-04-01 Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron. To be Published 0 0 0 0 3CO4 Crystal structure of a chitinase from Bacteroides thetaiotaomicron 2008-03-27 2008-04-08 Damodharan, L.,Burley, S.K.,Swaminathan, S. Crystal structure of a chitinase from Bacteroides thetaiotaomicron. To be Published 0 0 0 0 3BQ1 Insertion ternary complex of Dbh DNA polymerase 2007-12-19 2008-04-08 Wilson, R.C.,Pata, J.D. Structural Insights into the Generation of Single-Base Deletions by the Y Family DNA Polymerase Dbh Mol.Cell 2008 29 767 779 3BZC Crystal Structure of the Tex protein from Pseudomonas aeruginosa, crystal form I 2008-01-17 2008-04-08 Johnson, S.J.,Close, D.,Robinson, H.,Vallet-Gely, I.,Dove, S.L.,Hill, C.P. Crystal structure and RNA binding of the Tex protein from Pseudomonas aeruginosa. J.Mol.Biol. 2008 377 1460 1473 2QYK Crystal structure of PDE4A10 in complex with inhibitor NPV 2007-08-15 2008-04-08 Wang, H.,Peng, M.S.,Chen, Y.,Geng, J.,Robinson, H.,Houslay, M.D.,Cai, J.,Ke, H. Structures of the four subfamilies of phosphodiesterase-4 provide insight into the selectivity of their inhibitors. Biochem.J. 2007 408 193 201 2QYL Crystal structure of PDE4B2B in complex with inhibitor NPV 2007-08-15 2008-04-08 Wang, H.,Peng, M.S.,Chen, Y.,Geng, J.,Robinson, H.,Houslay, M.D.,Cai, J.,Ke, H. Structures of the four subfamilies of phosphodiesterase-4 provide insight into the selectivity of their inhibitors. Biochem.J. 2007 408 193 201 2QYM crystal structure of unliganded PDE4C2 2007-08-15 2008-04-08 Wang, H.,Peng, M.S.,Chen, Y.,Geng, J.,Robinson, H.,Houslay, M.D.,Cai, J.,Ke, H. Structures of the four subfamilies of phosphodiesterase-4 provide insight into the selectivity of their inhibitors. Biochem.J. 2007 408 193 201 2QYN Crystal structure of PDE4D2 in complex with inhibitor NPV 2007-08-15 2008-04-08 Wang, H.,Peng, M.S.,Chen, Y.,Geng, J.,Robinson, H.,Houslay, M.D.,Cai, J.,Ke, H. Structures of the four subfamilies of phosphodiesterase-4 provide insight into the selectivity of their inhibitors. Biochem.J. 2007 408 193 201 3COT Crystal structure of human liver delta(4)-3-ketosteroid 5beta-reductase (akr1d1) in complex with progesterone and nadp. Resolution: 2.03 A. 2008-03-29 2008-04-08 Di Costanzo, L.,Drury, J.E.,Penning, T.M.,Christianson, D.W. Crystal Structure of Human Liver {Delta}4-3-Ketosteroid 5{beta}-Reductase (AKR1D1) and Implications for Substrate Binding and Catalysis. J.Biol.Chem. 2008 283 16830 16839 3CMK Crystal structure of an Encephalitozoon cuniculi methionine aminopeptidase type 2 with angiogenesis inhibitor fumagillin bound 2008-03-22 2008-04-15 Alvarado, J.,Russell, M.,Zhang, A.,Adams, J.,Toro, R.,Burley, S.K.,Weiss, L.M.,Almo, S.C. Structural basis of inhibition of an Encephalitozoon cuniculi methionine aminopeptidase type 2. To be Published 0 0 0 0 3C5W Complex between PP2A-specific methylesterase PME-1 and PP2A core enzyme 2008-02-01 2008-04-15 Xing, Y.,Li, Z.,Chen, Y.,Stock, J.B.,Jeffrey, P.D.,Shi, Y. Structural mechanism of demethylation and inactivation of protein phosphatase 2A. Cell(Cambridge,Mass.) 2008 133 154 163 3C8J The crystal structure of natural killer cell receptor Ly49C 2008-02-12 2008-04-15 Deng, L.,Mariuzza, R.A. The crystal structure of natural killer cell receptor Ly49C To be Published 0 0 0 0 3C8B Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with inhibitory peptide RRGI 2008-02-11 2008-04-22 Kumaran, D.,Rawat, R.,Ludivico, M.L.,Ahmed, S.A.,Swaminathan, S. Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A J.Biol.Chem. 2008 283 18883 18891 3BJM Crystal structure of human DPP-IV in complex with (1S,3S, 5S)-2-[(2S)-2-AMINO-2-(3-HYDROXYTRICYCLO[3.3.1.13,7]DEC-1- YL)ACETYL]-2-AZABICYCLO[3.1.0]HEXANE-3-CARBONITRILE (CAS), (1S,3S,5S)-2-((2S)-2-AMINO-2-(3-HYDROXYADAMANTAN-1- YL)ACETYL)-2-AZABICYCLO[3.1.0]HEXANE-3-CARBONITRILE (IUPAC), OR BMS-477118 2007-12-04 2008-04-22 Metzler, W.J.,Yanchunas, J.,Weigelt, C.,Kish, K.,Klei, H.E.,Xie, D.,Zhang, Y.,Corbett, M.,Tamura, J.K.,He, B.,Hamann, L.G.,Kirby, M.S.,Marcinkeviciene, J. Involvement of DPP-IV catalytic residues in enzyme-saxagliptin complex formation Protein Sci. 2008 17 240 250 3BWI Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with an acetate ion bound at the active site 2008-01-09 2008-04-22 Kumaran, D.,Rawat, R.,Ludivico, M.L.,Ahmed, S.A.,Swaminathan, S. Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A J.Biol.Chem. 2008 283 18883 18891 3C88 Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with inhibitory peptide RRGC 2008-02-11 2008-04-22 Kumaran, D.,Rawat, R.,Ludivico, M.L.,Ahmed, S.A.,Swaminathan, S. Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A J.Biol.Chem. 2008 283 18883 18891 3C89 Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with inhibitory peptide RRGM 2008-02-11 2008-04-22 Kumaran, D.,Rawat, R.,Ludivico, M.L.,Ahmed, S.A.,Swaminathan, S. Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A J.Biol.Chem. 2008 283 18883 18891 3C8A Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with inhibitory peptide RRGL 2008-02-11 2008-04-22 Kumaran, D.,Rawat, R.,Ludivico, M.L.,Ahmed, S.A.,Swaminathan, S. Structure- and Substrate-based Inhibitor Design for Clostridium botulinum Neurotoxin Serotype A J.Biol.Chem. 2008 283 18883 18891 2R19 Crystal structure of the periplasmic lipopolysaccharide transport protein LptA (YhbN), orthorhombic form 2007-08-22 2008-04-29 Suits, M.D.,Sperandeo, P.,Deho, G.,Polissi, A.,Jia, Z. Novel structure of the conserved gram-negative lipopolysaccharide transport protein A and mutagenesis analysis. J.Mol.Biol. 2008 380 476 488 2R19 Crystal structure of the periplasmic lipopolysaccharide transport protein LptA (YhbN), orthorhombic form 2007-08-22 2008-04-29 Suits, M.D.,Sperandeo, P.,Deho, G.,Polissi, A.,Jia, Z. Novel structure of the conserved gram-negative lipopolysaccharide transport protein A and mutagenesis analysis. J.Mol.Biol. 2008 380 476 488 3CMG Crystal structure of putative beta-galactosidase from Bacteroides fragilis 2008-03-21 2008-04-29 Ramagopal, U.A.,Rutter, M.,Toro, R.,Hu, S.,Maletic, M.,Gheyi, T.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal structure of putative beta-galactosidase from Bacteroides fragilis. To be published 0 0 0 0 3BJC Crystal structure of the PDE5A catalytic domain in complex with a novel inhibitor 2007-12-03 2008-04-29 Chen, G.,Wang, H.,Robinson, H.,Cai, J.,Wan, Y.,Ke, H. An insight into the pharmacophores of phosphodiesterase-5 inhibitors from synthetic and crystal structural studies Biochem Pharmacol 2008 75 1717 1728 3D0D Crystal structure of an Encephalitozoon cuniculi methionine aminopeptidase type 2 with angiogenesis inhibitor TNP470 bound 2008-05-01 2008-05-13 Alvarado, J.,Russell, M.,Zhang, A.,Adams, J.,Toro, R.,Burley, S.K.,Weiss, L.M.,Almo, S.C. Structural basis of inhibition of an Encephalitozoon cuniculi methionine aminopeptidase type 2. To be Published 0 0 0 0 3CXJ Crystal structure of an uncharacterized protein from Methanothermobacter thermautotrophicus 2008-04-24 2008-05-13 Sugadev, R.,Burley, S.K.,Swaminathan, S. Crystal structure of an uncharacterized protein from Methanothermobacter thermautotrophicus. To be Published 0 0 0 0 3CYG Crystal structure of an uncharacterized protein from Fervidobacterium nodosum Rt17-B1 2008-04-25 2008-05-13 Damodharan, L.,Burley, S.K.,Swaminathan, S. Crystal structure of an uncharacterized protein from Fervidobacterium nodosum Rt17-B1. To be Published 0 0 0 0 3D0C Crystal structure of dihydrodipicolinate synthase from Oceanobacillus iheyensis at 1.9 A resolution 2008-05-01 2008-05-13 Satyanarayana, L.,Eswaramoorthy, S.,Sauder, J.M.,Burley, S.K.,Swaminathan, S. Crystal structure of dihydrodipicolinate synthase from Oceanobacillus iheyensis at 1.9 A resolution. To be Published 0 0 0 0 3CC4 Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit 2008-02-24 2008-05-20 Blaha, G.,Gurel, G.,Schroeder, S.J.,Moore, P.B.,Steitz, T.A. Mutations outside the anisomycin-binding site can make ribosomes drug-resistant. J.Mol.Biol. 2008 379 505 519 3CC7 Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2487U 2008-02-25 2008-05-20 Blaha, G.,Gurel, G.,Schroeder, S.J.,Moore, P.B.,Steitz, T.A. Mutations outside the anisomycin-binding site can make ribosomes drug-resistant. J.Mol.Biol. 2008 379 505 519 3CCE Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A 2008-02-25 2008-05-20 Blaha, G.,Gurel, G.,Schroeder, S.J.,Moore, P.B.,Steitz, T.A. Mutations outside the anisomycin-binding site can make ribosomes drug-resistant. J.Mol.Biol. 2008 379 505 519 3CCJ Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U 2008-02-26 2008-05-20 Blaha, G.,Gurel, G.,Schroeder, S.J.,Moore, P.B.,Steitz, T.A. Mutations outside the anisomycin-binding site can make ribosomes drug-resistant. J.Mol.Biol. 2008 379 505 519 3CCL Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535C. Density for Anisomycin is visible but not included in model. 2008-02-26 2008-05-20 Blaha, G.,Gurel, G.,Schroeder, S.J.,Moore, P.B.,Steitz, T.A. Mutations outside the anisomycin-binding site can make ribosomes drug-resistant. J.Mol.Biol. 2008 379 505 519 3CCM Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2611U 2008-02-26 2008-05-20 Blaha, G.,Gurel, G.,Schroeder, S.J.,Moore, P.B.,Steitz, T.A. Mutations outside the anisomycin-binding site can make ribosomes drug-resistant. J.Mol.Biol. 2008 379 505 519 3CCQ Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U 2008-02-26 2008-05-20 Blaha, G.,Gurel, G.,Schroeder, S.J.,Moore, P.B.,Steitz, T.A. Mutations outside the anisomycin-binding site can make ribosomes drug-resistant. J.Mol.Biol. 2008 379 505 519 3CCR Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model. 2008-02-26 2008-05-20 Blaha, G.,Gurel, G.,Schroeder, S.J.,Moore, P.B.,Steitz, T.A. Mutations outside the anisomycin-binding site can make ribosomes drug-resistant. J.Mol.Biol. 2008 379 505 519 3CCS Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A 2008-02-26 2008-05-20 Blaha, G.,Gurel, G.,Schroeder, S.J.,Moore, P.B.,Steitz, T.A. Mutations outside the anisomycin-binding site can make ribosomes drug-resistant. J.Mol.Biol. 2008 379 505 519 2RGJ Crystal structure of flavin-containing monooxygenase PhzS 2007-10-03 2008-05-20 Greenhagen, B.T.,Shi, K.,Robinson, H.,Gamage, S.,Bera, A.K.,Ladner, J.E.,Parsons, J.F. Crystal Structure of the Pyocyanin Biosynthetic Protein PhzS. Biochemistry 2008 47 5281 5289 3B2R Crystal Structure of PDE5A1 catalytic domain in complex with Vardenafil 2007-10-19 2008-05-20 Wang, H.,Ye, M.,Robinson, H.,Francis, S.H.,Ke, H. Conformational variations of both phosphodiesterase-5 and inhibitors provide the structural basis for the physiological effects of vardenafil and sildenafil. Mol.Pharmacol. 2008 73 104 110 3C66 Yeast poly(A) polymerase in complex with Fip1 residues 80-105 2008-02-02 2008-05-20 Meinke, G.,Ezeokonkwo, C.,Balbo, P.,Stafford, W.,Moore, C.,Bohm, A. Structure of yeast poly(A) polymerase in complex with a peptide from Fip1, an intrinsically disordered protein. Biochemistry 2008 47 6859 6869 3CJT Ribosomal protein L11 methyltransferase (PrmA) in complex with dimethylated ribosomal protein L11 2008-03-13 2008-05-20 Demirci, H.,Gregory, S.T.,Dahlberg, A.E.,Jogl, G. Multiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA Methyltransferase. Structure 2008 16 1059 1066 3D3A Crystal structure of a beta-galactosidase from Bacteroides thetaiotaomicron 2008-05-09 2008-05-27 Palani, K.,Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure of a beta-galactosidase from Bacteroides thetaiotaomicron. To be Published 0 0 0 0 2Q1K Cyrstal Structure of AscE from Aeromonas hydrophilla 2007-05-24 2008-06-03 Tan, Y.W.,Yu, H.B.,Leung, K.Y.,Sivaraman, J.,Mok, Y.K. Structure of AscE and induced burial regions in AscE and AscG upon formation of the chaperone needle-subunit complex of type III secretion system in Aeromonas hydrophila. Protein Sci. 2008 17 1748 1760 2REH Mechanistic and Structural Analyses of the Roles of Arg409 and Asp402 in the Reaction of the Flavoprotein Nitroalkane Oxidase 2007-09-26 2008-06-03 Fitzpatrick, P.F.,Bozinovski, D.M.,Heroux, A.,Shaw, P.G.,Valley, M.P.,Orville, A.M. Mechanistic and structural analyses of the roles of Arg409 and Asp402 in the reaction of the flavoprotein nitroalkane oxidase. Biochemistry 2007 46 13800 13808 3BS0 Crystal structure of the P. putida toluene transporter TodX 2007-12-21 2008-06-10 Hearn, E.M.,Patel, D.R.,van den Berg, B. Outer-membrane transport of aromatic hydrocarbons as a first step in biodegradation. Proc.Natl.Acad.Sci.Usa 2008 105 8601 8606 3B64 Macrophage Migration Inhibitory Factor (MIF) From /Leishmania Major 2007-10-27 2008-06-10 Kamir, D.,Zierow, S.,Leng, L.,Cho, Y.,Diaz, Y.,Griffith, J.,McDonald, C.,Merk, M.,Mitchell, R.A.,Trent, J.,Chen, Y.,Kwong, Y.K.,Xiong, H.,Vermeire, J.,Cappello, M.,McMahon-Pratt, D.,Walker, J.,Bernhagen, J.,Lolis, E.,Bucala, R. A leishmania ortholog of macrophage migration inhibitory factor modulates host macrophage responses. J.Immunol. 2008 180 8250 8261 3CSX Structural characterization of a protein in the DUF683 family- crystal structure of cce_0567 from the cyanobacterium Cyanothece 51142. 2008-04-10 2008-06-10 Buchko, G.W.,Robinson, H.,Addlagatta, A. Structural characterization of the protein cce_0567 from Cyanothece 51142, a protein associated with nitrogen fixation in the DUF683 family. To be Published 0 0 0 0 3D5L Crystal structure of regulatory protein RecX 2008-05-16 2008-06-10 Agarwal, R.,Burley, S.K.,Swaminathan, S. Crystal structure of DNA repair regulatory protein RecX. To be Published 0 0 0 0 2ZL1 MP1-p14 Scaffolding complex 2008-04-02 2008-06-24 Cui, Q.,Sulea, T.,Schrag, J.D.,Munger, C.,Hung, M.N.,Naim, M.,Cygler, M.,Purisima, E.O. Molecular dynamics-solvated interaction energy studies of protein-protein interactions: the MP1-p14 scaffolding complex. J.Mol.Biol. 2008 379 787 802 3BV4 Crystal structure of a rabbit muscle fructose-1,6-bisphosphate aldolase A dimer variant 2008-01-04 2008-06-24 Sherawat, M.,Tolan, D.R.,Allen, K.N. Structure of a rabbit muscle fructose-1,6-bisphosphate aldolase A dimer variant. Acta Crystallogr.,Sect.D 2008 64 543 550 2QTK Crystal Structure of the outer membrane protein opdK from Pseudomonas aeruginosa 2007-08-02 2008-06-24 Biswas, S.,Mohammad, M.M.,Movileanu, L.,van den Berg, B. Crystal Structure of the Outer Membrane Protein OpdK from Pseudomonas aeruginosa. Structure 2008 16 1027 1035 3CPT MP1-p14 Scaffolding complex 2008-04-01 2008-07-01 Cui, Q.,Sulea, T.,Schrag, J.D.,Munger, C.,Hung, M.N.,Naim, M.,Cygler, M.,Purisima, E.O. Molecular dynamics-solvated interaction energy studies of protein-protein interactions: the MP1-p14 scaffolding complex. J.Mol.Biol. 2008 379 787 802 3D0U Crystal Structure of Lysine Riboswitch Bound to Lysine 2008-05-02 2008-07-01 Garst, A.D.,Heroux, A.,Rambo, R.P.,Batey, R.T. Crystal structure of the lysine riboswitch regulatory mRNA element. J.Biol.Chem. 2008 283 22347 22351 3DJ8 Synthesis of (S)-2-amino-7,8-epoxyoctanoic acid and structure of its metal-bridging complex with human arginase I 2008-06-22 2008-07-08 Zakharian, T.Y.,Di Costanzo, L.,Christianson, D.W. Synthesis of (S)-2-amino-7,8-epoxyoctanoic acid and structure of its metal-bridging complex with human arginase I to be published 0 0 0 0 3D3X Crystal structure of botulinum neurotoxin serotype E catalytic domain in complex with SNAP-25 substrate peptide 2008-05-13 2008-07-08 Agarwal, R.,Swaminathan, S. SNAP-25 substrate peptide (residues 180-183) binds to but bypasses cleavage by catalytically active Clostridium botulinum neurotoxin E. J.Biol.Chem. 2008 283 25944 25951 3BOV Crystal structure of the receptor binding domain of mouse PD-L2 2007-12-17 2008-07-15 Lazar-Molnar, E.,Ramagopal, U.A.,Cao, E.,Toro, R.,Nathenson, S.G.,Almo, S.C. Crystal structure of the receptor binding domain of mouse PD-L2 To be published 0 0 0 0 3BP5 Crystal structure of the mouse PD-1 and PD-L2 complex 2007-12-18 2008-07-15 Lazar-Molnar, E.,Yan, Q.,Cao, E.,Ramagopal, U.,Nathenson, S.G.,Almo, S.C. Crystal structure of the complex between programmed death-1 (PD-1) and its ligand PD-L2. Proc.Natl.Acad.Sci.Usa 2008 105 10483 10488 2Z6M Crystal structure of Human Ferritin H8 as biotemplate for noble metal nanoparticle synthesis 2007-08-04 2008-07-22 Butts, C.A.,Swift, J.,Kang, S.G.,Di Costanzo, L.,Christianson, D.W.,Saven, J.G.,Dmochowski, I.J. Designed Ferritin Biotemplate for Noble Metal Nanoparticle Synthesis to be published 0 0 0 0 3DJE Crystal structure of the deglycating enzyme fructosamine oxidase from Aspergillus fumigatus (Amadoriase II) in complex with FSA 2008-06-23 2008-07-22 Collard, F.,Zhang, J.,Nemet, I.,Qanungo, K.R.,Monnier, V.M.,Yee, V.C. Crystal structure of the deglycating enzyme fructosamine oxidase (FAOX-II) To be Published 0 0 0 0 3DJE Crystal structure of the deglycating enzyme fructosamine oxidase from Aspergillus fumigatus (Amadoriase II) in complex with FSA 2008-06-23 2008-07-22 Collard, F.,Zhang, J.,Nemet, I.,Qanungo, K.R.,Monnier, V.M.,Yee, V.C. Crystal structure of the deglycating enzyme fructosamine oxidase (FAOX-II) To be Published 0 0 0 0 3DC1 Crystal structure of kynurenine aminotransferase II complex with alpha-ketoglutarate 2008-06-03 2008-07-29 Han, Q.,Cai, T.,Tagle, D.A.,Robinson, H.,Li, J. Substrate specificity and structure of human aminoadipate aminotransferase/kynurenine aminotransferase II Biosci.Rep. 2008 28 205 215 3DUG Crystal structure of zn-dependent arginine carboxypeptidase complexed with zinc 2008-07-17 2008-08-05 Patskovsky, Y.,Ramagopal, U.A.,Toro, R.,Meyer, A.J.,Freeman, J.,Iizuka, M.,Bain, K.,Rodgers, L.,Raushel, F.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal Structure of Arginine Carboxypeptidase. To be Published 0 0 0 0 3CLP M. loti cyclic-nucleotide binding domain mutant 2 2008-03-19 2008-08-05 Altieri, S.L.,Clayton, G.M.,Silverman, W.R.,Olivares, A.O.,De La Cruz, E.M.,Thomas, L.R.,Morais-Cabral, J.H. Structural and Energetic Analysis of Activation by a Cyclic Nucleotide Binding Domain. J.Mol.Biol. 2008 381 655 669 3CL1 M. loti cyclic-nucleotide binding domain, cyclic-GMP bound 2008-03-18 2008-08-05 Altieri, S.L.,Clayton, G.M.,Silverman, W.R.,Olivares, A.O.,De La Cruz, E.M.,Thomas, L.R.,Morais-Cabral, J.H. Structural and Energetic Analysis of Activation by a Cyclic Nucleotide Binding Domain. J.Mol.Biol. 2008 381 655 669 3CO2 Mlotik1 ion channel cyclic-nucleotide binding domain mutant 2008-03-27 2008-08-05 Altieri, S.L.,Clayton, G.M.,Silverman, W.R.,Olivares, A.O.,De La Cruz, E.M.,Thomas, L.R.,Morais-Cabral, J.H. Structural and Energetic Analysis of Activation by a Cyclic Nucleotide Binding Domain. J.Mol.Biol. 2008 381 655 669 3CMM Crystal Structure of the Uba1-Ubiquitin Complex 2008-03-23 2008-08-05 Lee, I.,Schindelin, H. Structural Insights into E1-Catalyzed Ubiquitin Activation and Transfer to Conjugating Enzymes Cell(Cambridge,Mass.) 2008 134 268 278 3E18 CRYSTAL STRUCTURE OF NAD-BINDING PROTEIN FROM Listeria innocua 2008-08-02 2008-08-12 Patskovsky, Y.,Ramagopal, U.A.,Toro, R.,Rutter, M.,Hu, S.,Groshong, C.,Sauder, J.M.,Burley, S.K.,Almo, S.C. CRYSTAL STRUCTURE OF NAD-BINDING PROTEIN FROM Listeria innocua To be Published 0 0 0 0 3E05 CRYSTAL STRUCTURE OF Precorrin-6y C5,15-methyltransferase FROM Geobacter metallireducens GS-15 2008-07-30 2008-08-12 Patskovsky, Y.,Ramagopal, U.A.,Toro, R.,Dickey, M.,Hu, S.,Maletic, M.,Sauder, J.M.,Burley, S.K.,Almo, S.C. CRYSTAL STRUCTURE OF Precorrin-6y C5,15-methyltransferase from Geobacter metallireducens To be Published 0 0 0 0 2QVI Crystal structure of N-cadherin domains EC12 2007-08-08 2008-08-12 Shapiro, L.S.,Carroll, K.J.,Honig, B. Biophysical characterization of N-cadherin and E-cadherin homophilic and heterophilic interactions To be Published 0 0 0 0 3DL5 Crystal Structure of the A287F Active Site Mutant of TS-DHFR from Cryptosporidium hominis 2008-06-26 2008-08-19 Martucci, W.E.,Vargo, M.A.,Anderson, K.S. Explaining an unusually fast parasitic enzyme: folate tail-binding residues dictate substrate positioning and catalysis in Cryptosporidium hominis thymidylate synthase. Biochemistry 2008 47 8902 8911 2RJL Crystal structure of human TL1A extracellular domain C95S/C135S mutant 2007-10-15 2008-08-26 Zhan, C.,Patskovsky, Y.,Yan, Q.,Shi, W.,Toro, R.,Bonanno, J.,Nathenson, S.G.,Almo, S.C. Crystal Structure of Human TL1A To be Published 0 0 0 0 3DWL Crystal Structure of Fission Yeast Arp2/3 Complex Lacking the Arp2 Subunit 2008-07-22 2008-08-26 Nolen, B.J.,Pollard, T.D. Structure and biochemical properties of fission yeast arp2/3 complex lacking the arp2 subunit. J.Biol.Chem. 2008 283 26490 26498 3C56 Class II fructose-1,6-bisphosphate aldolase from helicobacter pylori in complex with N-(3-Hydroxypropyl)-glycolohydroxamic acid bisphosphate, a competitive inhibitor 2008-01-30 2008-08-26 Fonvielle, M.,Coincon, M.,Daher, R.,Desbenoit, N.,Kosieradzka, K.,Barilone, N.,Gicquel, B.,Sygusch, J.,Jackson, M.,Therisod, M. Synthesis and Biochemical Evaluation of Selective Inhibitors of Class II Fructose Bisphosphate Aldolases: Towards New Synthetic Antibiotics. Chemistry 2008 14 8521 8529 3C52 Class II fructose-1,6-bisphosphate aldolase from helicobacter pylori in complex with phosphoglycolohydroxamic acid, a competitive inhibitor 2008-01-30 2008-08-26 Fonvielle, M.,Coincon, M.,Daher, R.,Desbenoit, N.,Kosieradzka, K.,Barilone, N.,Gicquel, B.,Sygusch, J.,Jackson, M.,Therisod, M. Synthesis and Biochemical Evaluation of Selective Inhibitors of Class II Fructose Bisphosphate Aldolases: Towards New Synthetic Antibiotics. Chemistry 2008 14 8521 8529 2RJK Crystal Structure of Human TL1A Extracellular Domain C95S Mutant 2007-10-15 2008-08-26 Zhan, C.,Yan, Q.,Patskovsky, Y.,Shi, W.,Ramagopal, U.A.,Toro, R.,Bonanno, J.,Nathenson, S.G.,Almo, S.C. Crystal Structure of Human TL1A To be Published 0 0 0 0 3E7P CRYSTAL STRUCTURE OF of putative methyltransferase from Bacteroides vulgatus ATCC 8482 2008-08-18 2008-09-02 Malashkevich, v.n.,Toro, R.,meyer, A.J.,Sauder, J.M.,Burley, S.K.,Almo, S.C. CRYSTAL STRUCTURE OF of putative methyltransferase from Bacteroides vulgatus ATCC 8482 To be Published 0 0 0 0 3BVH Crystal Structure of Recombinant gammaD364A Fibrinogen Fragment D with the Peptide Ligand Gly-Pro-Arg-Pro-Amide 2008-01-07 2008-09-02 Bowley, S.R.,Merenbloom, B.K.,Okumura, N.,Betts, L.,Heroux, A.,Gorkun, O.V.,Lord, S.T. Polymerization-defective fibrinogen variant gammaD364A binds knob ""A"" peptide mimic. Biochemistry 2008 47 8607 8613 3DUP Crystal structure of mutt/nudix family hydrolase from rhodospirillum rubrum atcc 11170 2008-07-17 2008-09-02 Patskovsky, Y.,Ramagopal, U.A.,Toro, R.,Freeman, J.,Chang, S.,Groshong, C.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal Structure of Mutt/Nudix Family Hydrolase from Rhodospirillum Rubrum To be Published 0 0 0 0 3D5E Crystal structure of human plasma platelet activating factor acetylhydrolase covalently inhibited by paraoxon 2008-05-16 2008-09-09 Samanta, U.,Bahnson, B.J. Crystal Structure of Human Plasma Platelet Activating Factor Acetylhydrolase: Structural Implication to Lipoprotein Binding and Catalysis. To be Published 0 0 0 0 2JKO FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH BIS-ANILINO PYRIMIDINE INHIBITOR 2008-08-28 2008-09-09 Lietha, D.,Eck, M.J. Crystal Structures of the Fak Kinase in Complex with Tae226 and Related Bis-Anilino Pyrimidine Inhibitors Reveal a Helical Conformation of the Dfg Motif. To be Published 0 0 0 0 2JKK FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH BIS-ANILINO PYRIMIDINE INHIBITOR 2008-08-28 2008-09-09 Lietha, D.,Eck, M.J. Crystal Structures of the Fak Kinase in Complex with Tae226 and Related Bis-Anilino Pyrimidine Inhibitors Reveal a Helical Conformation of the Dfg Motif. To be Published 0 0 0 0 2JKM FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH BIS-ANILINO PYRIMIDINE INHIBITOR 2008-08-28 2008-09-09 Lietha, D.,Eck, M.J. Crystal Structures of the Fak Kinase in Complex with Tae226 and Related Bis-Anilino Pyrimidine Inhibitors Reveal a Helical Conformation of the Dfg Motif. To be Published 0 0 0 0 2JKQ FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH BIS-ANILINO PYRIMIDINE INHIBITOR 2008-08-29 2008-09-09 Lietha, D.,Eck, M.J. Crystal Structures of the Fak Kinase in Complex with Tae226 and Related Bis-Anilino Pyrimidine Inhibitors Reveal a Helical Conformation of the Dfg Motif. To be Published 0 0 0 0 3D59 Crystal structure of human plasma platelet activating factor acetylhydrolase 2008-05-16 2008-09-09 Samanta, U.,Bahnson, B.J. Crystal Structure of Human Plasma Platelet Activating Factor Acetylhydrolase: Structural Implication to Lipoprotein binding and Catalysis. To be Published 0 0 0 0 3DJ2 Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, Tl+ Soak 2008-06-21 2008-09-16 Serganov, A.,Huang, L.,Patel, D.J. Structural insights into amino acid binding and gene control by a lysine riboswitch. Nature 2008 455 1263 1267 3DIO Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, IRIDIUM HEXAMINE SOAK 2008-06-20 2008-09-16 Serganov, A.,Huang, L.,Patel, D.J. Structural insights into amino acid binding and gene control by a lysine riboswitch. Nature 2008 455 1263 1267 3EEY CRYSTAL STRUCTURE OF PUTATIVE RRNA-METHYLASE FROM Clostridium thermocellum 2008-09-06 2008-09-16 Patskovsky, Y.,Ramagopal, U.A.,Toro, R.,Rutter, M.,Hu, S.,Bain, K.,Sauder, J.M.,Burley, S.K.,Almo, S.C. Crystal Structure of Rrna-Methylase from Clostridium Thermocellum To be Published 0 0 0 0 3DDA Crystal structure of the catalytic domain of Botulinum neurotoxin serotype a with a snap-25 peptide 2008-06-05 2008-09-16 Kumaran, D.,Rawat, R.,Ahmed, S.A.,Swaminathan, S. Crystal structure of the catalytic domain of Botulinum neurotoxin serotype a with a snap-25 peptide To be Published 0 0 0 0 3DDB Crystal structure of the catalytic domain of Botulinum neurotoxin serotype a with a substrate analog peptide 2008-06-05 2008-09-16 Kumaran, D.,Rawat, R.,Ahmed, S.A.,Swaminathan, S. Crystal structure of the catalytic domain of Botulinum neurotoxin serotype a with a substrate analog peptide To be Published 0 0 0 0 3E66 Crystal structure of the beta-finger domain of yeast Prp8 2008-08-14 2008-10-14 Yang, K.,Zhang, L.,Xu, T.,Heroux, A.,Zhao, R. Crystal structure of the beta-finger domain of Prp8 reveals analogy to ribosomal proteins. Proc.Natl.Acad.Sci.Usa 2008 105 13817 13822 3DFZ SirC, precorrin-2 dehydrogenase 2008-06-12 2008-10-21 Schubert, H.L.,Rose, R.S.,Leech, H.K.,Brindley, A.A.,Hill, C.P.,Rigby, S.E.J.,Warren, M.J. Structure and function of SirC from Bacillus megaterium: a metal-binding precorrin-2 dehydrogenase Biochem.J. 2008 415 257 263 3ERZ Directing Noble Metal Ion Chemistry within a Designed Ferritin Protein. Mercury Ions on the Three-Fold Channel 2008-10-03 2008-10-21 Butts, C.A.,Swift, J.,Kang, S.G.,Di Costanzo, L.,Christianson, D.W.,Saven, J.G.,Dmochowski, I.J. Directing Noble Metal Ion Chemistry within a Designed Ferritin Protein TO BE PUBLISHED 0 0 0 0 3EVN CRYSTAL STRUCTURE OF putative oxidoreductase from Streptococcus agalactiae 2603V/r 2008-10-13 2008-10-21 Malashkevich, V.N.,Toro, R.,Meyer, A.J.,Sauder, J.M.,Burley, S.K.,Almo, S.C. CRYSTAL STRUCTURE OF putative Gfo/Idh/MocA family oxidoreductase from Streptococcus agalactiae 2603V/r To be Published 0 0 0 0 3BE5 Crystal structure of FitE (crystal form 1), a group III periplasmic siderophore binding protein 2007-11-16 2008-10-28 Shi, R.,Proteau, A.,Wagner, J.,Cui, Q.,Purisima, E.O.,Matte, A.,Cygler, M. Trapping open and closed forms of FitE, a group III periplasmic binding protein Proteins: Struct.,Funct.,Genet 2008 0 0 0 3BE6 Crystal structure of FitE (crystal form 2), a group III periplasmic siderophore binding protein 2007-11-16 2008-10-28 Shi, R.,Proteau, A.,Wagner, J.,Cui, Q.,Purisima, E.O.,Matte, A.,Cygler, M. Trapping open and closed forms of FitE, a group III periplasmic binding protein Proteins: Struct.,Funct.,Genet 2008 0 0 0 3EFY Structure of the Cyclomodulin Cif from Pathogenic Escherichia coli 2008-09-10 2008-10-28 Hsu, Y.,Jubelin, G.,Taieb, F.,Nougayrede, J.P.,Oswald, E.,Stebbins, C.E. Structure of the Cyclomodulin Cif from Pathogenic Escherichia coli. J.Mol.Biol. 2008 0 0 0 3B83 Tba 2007-10-31 2008-11-04 Hu, X.,Ke, H.,Kuhlmlan, B. Computer-based Redesign of a Beta-Sandwich Protein Suggests that Extensive Negative Design is Not Required for De Novo Beta-Sheet Design To be Published 0 0 0 0 3EPR Crystal structure of putative HAD superfamily hydrolase from Streptococcus agalactiae. 2008-09-29 2008-11-04 Ramagopal, U.A.,Toro, R.,Dickey, M.,Tang, B.K.,Groshong, C.,Rodgers, L.,Burley, S.K.,Almo, S.C. Crystal structure of putative HAD superfamily hydrolase from Streptococcus agalactiae. To be Published 0 0 0 0 3F0P Crystal structure of the mercury-bound form of MerB, the Organomercurial Lyase involved in a bacterial mercury resistance system 2008-10-25 2008-11-11 Lafrance-Vanasse, J.,Lefebvre, M.,Di Lello, P.,Sygusch, J.,Omichinski, J.G. Crystal structures of the organomercurial lyase MerB in its free and mercury-bound form: Insights into the mechanism of methylmercury degradation to be published 0 0 0 0 3F2G Crystal structure of MerB mutant C160S, the Organomercurial Lyase involved in a bacterial mercury resistance system 2008-10-29 2008-11-11 Lafrance-Vanasse, J.,Lefebvre, M.,Di Lello, P.,Sygusch, J.,Omichinski, J.G. Crystal structures of the organomercurial lyase MerB in its free and mercury-bound form: Insights into the mechanism of methylmercury degradation to be published 0 0 0 0 3DF0 Calcium-dependent complex between m-calpain and calpastatin 2008-06-11 2008-11-11 Moldoveanu, T.,Gehring, K.,Green, D.R. Concerted multi-pronged attack by calpastatin specifically occludes the catalytic cleft of heterodimeric calpains To be Published 0 0 0 0 3EVZ Crystal strucure of Methyltransferase from Pyrococcus furiosus 2008-10-13 2008-11-11 Zhang, Z.,Eswaramoorthy, S.,Burley, S.K.,Swaminathan, S. Crystal structure of methyltransferase from Pyrococcus furiosus To be Published 0 0 0 0 3F1C CRYSTAL STRUCTURE OF 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase from Listeria monocytogenes 2008-10-27 2008-11-18 Patskovsky, Y.,Ho, J.,Toro, R.,Gilmore, M.,Miller, S.,Groshong, C.,Sauder, M.J.,Burley, S.K.,Almo, S.C. CRYSTAL STRUCTURE OF 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase from Listeria monocytogenes To be Published 0 0 0 0