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The structural basis of sirtuin substrate affinity Biochemistry 2006 45 7511 7521 2I5J 17184135 Crystal structure of HIV-1 reverse transcriptase (RT) in complex with DHBNH, an RNASE H inhibitor 2006-08-24 2006-12-05 Himmel, D.M.,Sarafianos, S.G.,Dharmasena, S.,Hossain, M.M.,McCoy-Simandle, K.,Ilina, T.,Clark, A.D.,Knight, J.L.,Julias, J.G.,Clark, P.K.,Krogh-Jespersen, K.,Levy, R.M.,Hughes, S.H.,Parniak, M.A.,Arnold, E. HIV-1 reverse transcriptase structure with RNase H inhibitor dihydroxy benzoyl naphthyl hydrazone bound at a novel site. Acs Chem.Biol. 2006 1 702 712 2GT2 16981689 Structure of the E. coli GDP-mannose mannosyl hydrolase 2006-04-27 2006-12-12 Gabelli, S.B.,Azurmendi, H.F.,Bianchet, M.A.,Amzel, L.M.,Mildvan, A.S. X-ray, NMR, and mutational studies of the catalytic cycle of the GDP-mannose mannosyl hydrolase reaction. 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Molecular Basis of Selectivity of Nucleoside Triphosphate Incorporation Opposite O6-Benzylguanine by Sulfolobus Solfataricus DNA Polymerase Dpo4: Steady-State and Pre-Steady-State Kinetics and X-Ray Crystallography of Correct and Incorrect Pairing. J.Biol.Chem. 2007 282 13573 0 2P1L 17337444 Structure of the Bcl-XL:Beclin 1 complex 2007-03-05 2007-03-13 Oberstein, A.,Jeffrey, P.D.,Shi, Y. Crystal structure of the Bcl-XL-Beclin 1 peptide complex: Beclin 1 is a novel BH3-only protein J.Biol.Chem. 2007 282 13123 13132 2ITT 17349580 Crystal structure of EGFR kinase domain L858R mutation in complex with AEE788 2006-05-25 2007-04-03 Yun, C.-H.,Boggon, T.J.,Li, Y.,Woo, S.,Greulich, H.,Meyerson, M.,Eck, M.J. 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Protein Sci. 2007 16 2240 2250 2NUT 17499046 Crystal Structure of the human Sec23a/24a heterodimer, complexed with the SNARE protein Sec22b 2006-11-09 2007-05-22 Mancias, J.D.,Goldberg, J. The Transport Signal on Sec22 for Packaging into COPII-Coated Vesicles is a Conformational Epitope Mol.Cell 2007 26 403 414 2P8R 17473007 Crystal structure of the C-terminal domain of C. elegans pre-mRNA splicing factor Prp8 carrying R2303K mutant 2007-03-22 2007-05-22 Zhang, L.,Shen, J.,Guarnieri, M.T.,Heroux, A.,Yang, K.,Zhao, R. Crystal structure of the C-terminal domain of splicing factor Prp8 carrying retinitis pigmentosa mutants Protein Sci. 2007 16 1024 1031 2O8B 17531815 human MutSalpha (MSH2/MSH6) bound to ADP and a G T mispair 2006-12-12 2007-06-05 Warren, J.J.,Pohlhaus, T.J.,Changela, A.,Iyer, R.R.,Modrich, P.L.,Beese, L.S. Structure of the Human MutSalpha DNA Lesion Recognition Complex. Mol.Cell 2007 26 579 592 2PD7 17510367 2.0 Angstrom Crystal Structure of the Fungal Blue-Light Photoreceptor Vivid 2007-03-31 2007-06-05 Zoltowski, B.D.,Schwerdtfeger, C.,Widom, J.,Loros, J.J.,Bilwes, A.M.,Dunlap, J.C.,Crane, B.R. Conformational switching in the fungal light sensor Vivid Science 2007 316 1054 1057 2PM7 17604721 Crystal structure of yeast Sec13/31 edge element of the COPII vesicular coat, selenomethionine version 2007-04-20 2007-07-03 Fath, S.,Mancias, J.D.,Bi, X.,Goldberg, J. Structure and Organization of Coat Proteins in the COPII Cage. Cell(Cambridge,Mass.) 2007 129 1325 1336 2PFF 17448991 Structural Insights of Yeast Fatty Acid Synthase 2007-04-04 2007-07-10 Xiong, Y.,Lomakin, I.B.,Steitz, T.A. Structural Insights of Yeast Fatty Acid Synthase Cell(Cambridge,Mass.) 2007 129 319 332 2OIP 17580969 Crystal Structure of the S290G Active Site Mutant of TS-DHFR from Cryptosporidium hominis 2007-01-11 2007-07-17 Doan, L.T.,Martucci, W.E.,Vargo, M.A.,Atreya, C.E.,Anderson, K.S. Nonconserved residues Ala287 and Ser290 of the Cryptosporidium hominis thymidylate synthase domain facilitate its rapid rate of catalysis Biochemistry 2007 46 8379 8391 2PYL 17611604 Phi29 DNA polymerase complexed with primer-template DNA and incoming nucleotide substrates (ternary complex) 2007-05-16 2007-07-17 Berman, A.J.,Kamtekar, S.,Goodman, J.L.,Lazaro, J.M.,de Vega, M.,Blanco, L.,Salas, M.,Steitz, T.A. Structures of phi29 DNA polymerase complexed with substrate: the mechanism of translocation in B-family polymerases Embo J. 2007 26 3494 3505 2PZS 17611604 Phi29 DNA polymerase complexed with primer-template DNA (post-translocation binary complex) 2007-05-18 2007-07-17 Berman, A.J.,Kamtekar, S.,Goodman, J.L.,Lazaro, J.M.,de Vega, M.,Blanco, L.,Salas, M.,Steitz, T.A. Structures of phi29 DNA polymerase complexed with substrate: the mechanism of translocation in B-family polymerases Embo J. 2007 26 3494 3505 2P95 17588746 Factor xa in complex with the inhibitor 5-chloro-N-((1R,2S)-2-(4-(2-oxopyridin-1(2H)-YL)benzamido) cyclopentyl)thiophene-2-carboxamide 2007-03-23 2007-07-24 Qiao, J.X.,Chang, C.-H.,Cheney, D.L.,Morin, P.E.,Wang, G.Z.,King, S.R.,Wang, T.C.,Rendina, A.R.,Luettgen, J.M.,Knabb, R.M.,Wexler, R.R.,Lam, P.Y.S. SAR and X-ray structures of enantiopure 1,2-cis-(1R,2S)-cyclopentyldiamine and cyclohexyldiamine derivatives as inhibitors of coagulation Factor Xa Bioorg.Med.Chem.Lett. 2007 17 4419 4427 2Q6T 17606462 Crystal structure of the Thermus aquaticus DnaB monomer 2007-06-05 2007-07-24 Bailey, S.,Eliason, W.K.,Steitz, T.A. The crystal structure of the Thermus aquaticus DnaB helicase monomer. Nucleic Acids Res. 2007 35 4728 4736 2Q6W 17583734 The structure of HLA-DRA, DRB3*0101 (DR52a) with bound platelet integrin peptide associated with fetal and neonatal alloimmune thrombocytopenia 2007-06-05 2007-07-24 Parry, C.S.,Gorski, J.,Stern, L.J. Crystallographic Structure of the Human Leukocyte Antigen DRA, DRB3*0101: Models of a Directional Alloimmune Response and Autoimmunity J.Mol.Biol. 2007 371 435 446 2E9W 17662946 Crystal structure of the extracellular domain of Kit in complex with stem cell factor (SCF) 2007-01-27 2007-08-07 Yuzawa, S.,Opatowsky, Y.,Zhang, Z.,Mandiyan, V.,Lax, I.,Schlessinger, J. Structural Basis for Activation of the Receptor Tyrosine Kinase KIT by Stem Cell Factor Cell(Cambridge,Mass.) 2007 130 323 334 2I5F 18034889 Crystal structure of the C-terminal PH domain of pleckstrin in complex with D-myo-Ins(1,2,3,5,6)P5 2006-08-24 2007-08-07 Jackson, S.G.,Zhang, Y.,Haslam, R.J.,Junop, M.S. Structural analysis of the carboxy terminal PH domain of pleckstrin bound to D-myo-inositol 1,2,3,5,6-pentakisphosphate. Bmc Struct.Biol. 2007 7 80 80 2QKD 17704259 Crystal structure of tandem ZPR1 domains 2007-07-10 2007-08-07 Mishra, A.K.,Gangwani, L.,Davis, R.J.,Lambright, D.G. Structural insights into the interaction of the evolutionarily conserved ZPR1 domain tandem with eukaryotic EF1A, receptors, and SMN complexes. Proc.Natl.Acad.Sci.Usa 2007 104 13930 13935 2Q7R 17600184 Crystal structure of human FLAP with an iodinated analog of MK-591 2007-06-07 2007-08-21 Ferguson, A.D.,McKeever, B.M.,Xu, S.,Wisniewski, D.,Miller, D.K.,Yamin, T.T.,Spencer, R.H.,Chu, L.,Ujjainwalla, F.,Cunningham, B.R.,Evans, J.F.,Becker, J.W. Crystal structure of inhibitor-bound human 5-lipoxygenase-activating protein. Science 2007 317 510 512 2QTI Crystal structure of the UPF0352 protein SO_2176 from Shewanella oneidensis. NESG target SoR77. 2007-08-02 2007-08-21 Vorobiev, S.M.,Su, M.,Seetharaman, J.,Kuzin, A.P.,Wang, D.,Cunningham, K.,Owens, L.,Maglaqui, M.,Fang, Y.,Xiao, R.,Acton, T.B.,Montelione, G.T.,Tong, L.,Hunt, J.F. Crystal structure of the UPF0352 protein SO_2176 from Shewanella oneidensis. To be Published 0 0 0 0 2Q1Z 17803943 Crystal Structure of Rhodobacter sphaeroides SigE in complex with the anti-sigma ChrR 2007-05-25 2007-09-18 Campbell, E.A.,Greenwell, R.,Anthony, J.R.,Wang, S.,Lim, L.,Das, K.,Sofia, H.J.,Donohue, T.J.,Darst, S.A. A conserved structural module regulates transcriptional responses to diverse stress signals in bacteria. Mol.Cell 2007 27 793 805 2REO Crystal structure of human sulfotransferase 1C3 (Sult1C3) in complex with PAP 2007-09-26 2007-10-09 Pan, P.,Tempel, W.,Dong, A.,Loppnau, P.,Arrowsmith, C.H.,Edwards, A.M.,Sundstrom, M.,Weigelt, J.,Bochkarev, A.,Plotnikov, A.N. Crystal structure of human sulfotransferase 1C3 (Sult1C3) in complex with PAP. To be Published 0 0 0 0 2IJX 18703842 Crystal structure of PCNA3 monomer from Sulfolobus solfataricus. 2006-10-01 2007-10-16 Hlinkova, V.,Xing, G.,Bauer, J.,Shin, Y.J.,Dionne, I.,Rajashankar, K.R.,Bell, S.D.,Ling, H. Structures of monomeric, dimeric and trimeric PCNA: PCNA-ring assembly and opening. Acta Crystallogr.,Sect.D 2008 64 941 949 2ODJ 17952093 Crystal structure of the outer membrane protein OprD from Pseudomonas aeruginosa 2006-12-22 2007-10-16 Biswas, S.,Mohammad, M.M.,Patel, D.R.,Movileanu, L.,van den Berg, B. Structural insight into OprD substrate specificity. Nat.Struct.Mol.Biol. 2007 14 1108 1109 2QFI 17717154 Structure of the zinc transporter YiiP 2007-06-27 2007-10-16 Lu, M.,Fu, D. Structure of the zinc transporter YiiP. Science 2007 317 1746 1748 2VA3 17951245 Complex structure of Sulfolobus solfataricus DPO4 and DNA duplex containing a hydrophobic thymine isostere 2,4-difluorotoluene nucleotide in the template strand 2007-08-28 2007-10-30 Irimia, A.,Eoff, R.L.,Pallan, P.S.,Guengerich, F.P.,Egli, M. Structure and Activity of Y-Class DNA Polymerase Dpo4 from Sulfolobus Solfataricus with Templates Containing the Hydrophobic Thymine Analog 2,4-Difluorotoluene. J.Biol.Chem. 2007 282 36421 0 3B6V Crystal structure of the motor domain of human kinesin family member 3C in complex with ADP 2007-10-29 2007-11-13 Zhu, H.,Tempel, W.,Shen, Y.,Landry, R.,Arrowsmith, C.H.,Edwards, A.M.,Sundstrom, M.,Weigelt, J.,Bochkarev, A.,Park, H. Motor domain of human kinesin family member 3C in complex with ADP. To be Published 0 0 0 0 2REW Crystal Structure of PPARalpha ligand binding domain with BMS-631707 2007-09-27 2007-11-27 Wang, W.,Devasthale, P.,Farrelly, D.,Gu, L.,Peters, A.,Harrity, T.,Cap, M.,Chu, C.,Kunselman, L.,Morgan, N.,Ponticiello, R.,Zebo, R.,Zhang, L.,Locke, K.,Lippy, J.,O'Malley, K.,Hosagrahara, V.,Zhang, L.,Kadiyala, P.,Chang, C.Y.,Muckelbauer, J.,Zahler, R.,Hariharan, N.,Ryono, D.,Cheng, P.T.W. Discovery of Azetidinone Acids as Conformationally-Constrained Dual (alpha/gamma) PPAR Activators To be Published 0 0 0 0 3B7X Crystal structure of human FK506-Binding Protein 6 2007-10-31 2007-11-27 Walker, J.R.,Davis, T.,Butler-Cole, C.,Paramanathan, R.,Weigelt, J.,Arrowsmith, C.H.,Edwards, A.M.,Bochkarev, A.,Dhe-Paganon, S. Human FK506-Binding Protein 6. To be Published 0 0 0 0 3BCZ 18045866 Crystal structure of Memo 2007-11-13 2007-11-27 Qiu, C.,Lienhard, S.,Hynes, N.E.,Badache, A.,Leahy, D.J. Memo Is Homologous to Nonheme Iron Dioxygenases and Binds an ErbB2-derived Phosphopeptide in Its Vestigial Active Site. J.Biol.Chem. 2008 283 2734 2740 2R09 18042453 Crystal Structure of Autoinhibited Form of Grp1 Arf GTPase Exchange Factor 2007-08-17 2007-12-04 DiNitto, J.P.,Delprato, A.,Gabe Lee, M.T.,Cronin, T.C.,Huang, S.,Guilherme, A.,Czech, M.P.,Lambright, D.G. Structural Basis and Mechanism of Autoregulation in 3-Phosphoinositide-Dependent Grp1 Family Arf GTPase Exchange Factors. Mol.Cell 2007 28 569 583 2PVE 18053245 NMR and X-ray Analysis of Structural Additivity in Metal Binding Site-Swapped Hybrids of Rubredoxin 2007-05-09 2007-12-18 Lemaster, D.M.,Anderson, J.S.,Wang, L.,Guo, Y.,Li, H.,Hernandez, G. NMR and X-ray analysis of structural additivity in metal binding site-swapped hybrids of rubredoxin. Bmc Struct.Biol. 2007 7 81 81 2PVX 18053245 NMR and X-ray Analysis of Structural Additivity in Metal Binding Site-Swapped Hybrids of Rubredoxin 2007-05-10 2007-12-18 Lemaster, D.M.,Anderson, J.S.,Wang, L.,Guo, Y.,Li, H.,Hernandez, G. NMR and X-ray analysis of structural additivity in metal binding site-swapped hybrids of rubredoxin Bmc Struct.Biol. 2007 7 81 81 2QTV 17981133 Structure of Sec23-Sar1 complexed with the active fragment of Sec31 2007-08-02 2008-01-15 Bi, X.,Mancias, J.D.,Goldberg, J. Insights into COPII coat nucleation from the structure of Sec23.Sar1 complexed with the active fragment of Sec31. Dev.Cell 2007 13 635 645 3BKD 18235504 High resolution Crystal structure of Transmembrane domain of M2 protein 2007-12-06 2008-01-29 Stouffer, A.L.,Acharya, R.,Salom, D.,Levine, A.S.,Di Costanzo, L.,Soto, C.S.,Tereshko, V.,Nanda, V.,Stayrook, S.,DeGrado, W.F. Structural basis for the function and inhibition of an influenza virus proton channel Nature 2008 451 596 599 2PA8 18235446 X-Ray Crystal Structure of the D/L Subcomplex of the Sulfolobus Solfataricus RNA polymerase 2007-03-27 2008-02-05 Hirata, A.,Klein, B.J.,Murakami, K.S. The X-ray crystal structure of RNA polymerase from Archaea. Nature 2008 451 851 854 2R5Y 17981120 Structure of Scr/Exd complex bound to a consensus Hox-Exd site 2007-09-04 2008-02-05 Joshi, R.,Passner, J.M.,Rohs, R.,Jain, R.,Sosinsky, A.,Crickmore, M.A.,Jacob, V.,Aggarwal, A.K.,Honig, B.,Mann, R.S. Functional specificity of a Hox protein mediated by the recognition of minor groove structure Cell(Cambridge,Mass.) 2007 131 530 543 3BGR 18230722 Crystal structure of K103N/Y181C mutant HIV-1 reverse transcriptase (RT) in complex with TMC278 (Rilpivirine), a non-nucleoside RT inhibitor 2007-11-27 2008-02-12 Das, K.,Bauman, J.D.,Clark Jr., A.D.,Frenkel, Y.V.,Lewi, P.J.,Shatkin, A.J.,Hughes, S.H.,Arnold, E. High-resolution structures of HIV-1 reverse transcriptase/TMC278 complexes: Strategic flexibility explains potency against resistance mutations. Proc.Natl.Acad.Sci.Usa 2008 105 1466 1471 2QIE 18092812 Staphylococcus aureus molybdopterin synthase in complex with precursor Z 2007-07-04 2008-02-19 Daniels, J.N.,Wuebbens, M.M.,Rajagopalan, K.V.,Schindelin, H. Crystal structure of a molybdopterin synthase-precursor Z complex: insight into its sulfur transfer mechanism and its role in molybdenum cofactor deficiency. Biochemistry 2008 47 615 626 3C0Z 18285338 Crystal structure of catalytic domain of human histone deacetylase HDAC7 in complex with SAHA 2008-01-21 2008-02-19 Schuetz, A.,Min, J.,Allali-Hassani, A.,Schapira, M.,Shuen, M.,Loppnau, P.,Mazitschek, R.,Kwiatkowski, N.P.,Lewis, T.A.,Maglathin, R.L.,McLean, T.H.,Bochkarev, A.,Plotnikov, A.N.,Vedadi, M.,Arrowsmith, C.H. Human HDAC7 harbors a class IIa histone deacetylase-specific zinc binding motif and cryptic deacetylase activity. J.Biol.Chem. 2008 283 11355 11363 3C10 18285338 Crystal structure of catalytic domain of human histone deacetylase HDAC7 in complex with Trichostatin A (TSA) 2008-01-21 2008-02-19 Schuetz, A.,Min, J.,Allali-Hassani, A.,Schapira, M.,Shuen, M.,Loppnau, P.,Mazitschek, R.,Kwiatkowski, N.P.,Lewis, T.A.,Maglathin, R.L.,McLean, T.H.,Bochkarev, A.,Plotnikov, A.N.,Vedadi, M.,Arrowsmith, C.H. Human HDAC7 harbors a class IIa histone deacetylase-specific zinc binding motif and cryptic deacetylase activity. J.Biol.Chem. 2008 283 11355 11363 2QFJ 18059478 Crystal Structure of First Two RRM Domains of FIR Bound to ssDNA from a Portion of FUSE 2007-06-27 2008-03-04 Crichlow, G.V.,Zhou, H.,Hsiao, H.-H.,Frederick, K.B.,Debrosse, M.,Yang, Y.,Folta-Stogniew, E.J.,Chung, H.-J.,Fan, C.,De La Cruz, E.M.,Levens, D.,Lolis, E.,Braddock, D. Dimerization of FIR upon FUSE DNA binding suggests a mechanism of c-myc inhibition EMBO J. 2007 27 277 289 2QFJ 18059478 Crystal Structure of First Two RRM Domains of FIR Bound to ssDNA from a Portion of FUSE 2007-06-27 2008-03-04 Crichlow, G.V.,Zhou, H.,Hsiao, H.-H.,Frederick, K.B.,Debrosse, M.,Yang, Y.,Folta-Stogniew, E.J.,Chung, H.-J.,Fan, C.,De La Cruz, E.M.,Levens, D.,Lolis, E.,Braddock, D. 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Science 2008 319 1090 1092 3CB4 18362332 The Crystal Structure of LepA 2008-02-21 2008-03-18 Evans, R.N.,Blaha, G.,Bailey, S.,Steitz, T.A. The structure of LepA, the ribosomal back translocase. Proc.Natl.Acad.Sci.Usa 2008 105 4673 4678 3BNX 18385128 Crystal structure of Aristolochene synthase complexed with farnesyl diphosphate 2007-12-14 2008-03-25 Shishova, E.Y.,Yu, F.,Miller, D.J.,Faraldos, J.A.,Zhao, Y.,Coates, R.M.,Allemann, R.K.,Cane, D.E.,Christianson, D.W. X-ray Crystallographic Studies of Substrate Binding to Aristolochene Synthase Suggest a Metal Ion Binding Sequence for Catalysis J.Biol.Chem. 2008 283 15431 15439 3BNY 18385128 Crystal structure of aristolochene synthase complexed with 2-fluorofarnesyl diphosphate (2F-FPP) 2007-12-14 2008-03-25 Shishova, E.Y.,Yu, F.,Miller, D.J.,Faraldos, J.A.,Zhao, Y.,Coates, R.M.,Allemann, R.K.,Cane, D.E.,Christianson, D.W. 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Biochemistry 2007 46 13800 13808 2RHK 18725644 Crystal structure of influenza A NS1A protein in complex with F2F3 fragment of human cellular factor CPSF30, Northeast Structural Genomics Targets OR8C and HR6309A 2007-10-09 2008-07-01 Das, K.,Ma, L.C.,Xiao, R.,Radvansky, B.,Aramini, J.,Zhao, L.,Marklund, J.,Kuo, R.L.,Twu, K.Y.,Arnold, E.,Krug, R.M.,Montelione, G.T. Structural basis for suppression of a host antiviral response by influenza A virus. Proc.Natl.Acad.Sci.Usa 2008 105 13093 13098 3COQ 18611375 Structural Basis for Dimerization in DNA Recognition by Gal4 2008-03-29 2008-07-01 Hong, M.,Fitzgerald, M.X.,Harper, S.,Luo, C.,Speicher, D.W.,Marmorstein, R. Structural basis for dimerization in DNA recognition by gal4. Structure 2008 16 1019 1026 3CXG Crystal structure of Plasmodium falciparum thioredoxin, PFI0790w 2008-04-24 2008-07-15 Wernimont, A.K.,Lew, J.,Kozieradzki, I.,Cossar, D.,Schapira, M.,Bochkarev, A.,Arrowsmith, C.H.,Bountra, C.,Wilkstrom, M.,Edwards, A.M.,Hui, R.,Hills, T.,Pizarro, J. Crystal structure of Plasmodium falciparum thioredoxin, PFI0790w. To be Published 0 0 0 0 3CPW 18494460 The structure of the antibiotic LINEZOLID bound to the large ribosomal subunit of HALOARCULA MARISMORTUI 2008-04-01 2008-07-22 Ippolito, J.A.,Kanyo, Z.K.,Wang, D.,Franceschi, F.J.,Moore, P.B.,Steitz, T.A.,Duffy, E.M. Crystal Structure of the Oxazolidinone Antibiotic Linezolid Bound to the 50S Ribosomal Subunit J.Med.Chem. 2008 51 3353 3356 3D8R 18651750 Thermus thermophilus Uroporphyrinogen III Synthase 2008-05-23 2008-08-05 Schubert, H.L.,Phillips, J.D.,Heroux, A.,Hill, C.P. Structure and mechanistic implications of a uroporphyrinogen III synthase-product complex. 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J.Mol.Biol. 2008 384 878 895 3DXJ 18957204 Crystal structure of thermus thermophilus rna polymerase holoenzyme in complex with the antibiotic myxopyronin 2008-07-24 2008-10-14 Mukhopadhyay, J.,Das, K.,Ismail, S.,Koppstein, D.,Jang, M.,Hudson, B.,Sarafianos, S.,Tuske, S.,Patel, J.,Jansen, R.,Irschik, H.,Arnold, E.,Ebright, R.H. The RNA polymerase ""switch region"" is a target for inhibitors. Cell(Cambridge,Mass.) 2008 135 295 307 3EOE 20856875 Crystal Structure of Pyruvate Kinase from toxoplasma gondii, 55.m00007 2008-09-26 2008-10-14 Bakszt, R.,Wernimont, A.,Allali-Hassani, A.,Mok, M.W.,Hills, T.,Hui, R.,Pizarro, J.C. The crystal structure of Toxoplasma gondii pyruvate kinase 1. Plos One 2010 5 0 0 3EFO 18843296 Crystal Structure of the mammalian COPII-coat protein Sec23/24 bound to the transport signal sequence of syntaxin 5 2008-09-09 2008-10-21 Mancias, J.D.,Goldberg, J. Structural basis of cargo membrane protein discrimination by the human COPII coat machinery. 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Structural basis for the inhibition mechanism of human cystathionine gamma-lyase, an enzyme responsible for the production of H(2)S J.Biol.Chem. 2009 284 3076 3085 3CSE 18804036 Candida glabrata Dihydrofolate Reductase complexed with NADPH and 2,4-diamino-5-(3-(2,5-dimethoxyphenyl)prop-1-ynyl)-6-ethylpyrimidine (UCP120B) 2008-04-09 2008-11-25 Liu, J.,Bolstad, D.B.,Smith, A.E.,Priestley, N.D.,Wright, D.L.,Anderson, A.C. Structure-guided development of efficacious antifungal agents targeting Candida glabrata dihydrofolate reductase. Chem.Biol. 2008 15 990 996 3C2P 19061645 X-ray crystal structure of the N4 mini-vRNAP P1 promoter complex 2008-01-25 2008-12-09 Gleghorn, M.L.,Davydova, E.K.,Rothman-Denes, L.B.,Murakami, K.S. Structural basis for DNA-hairpin promoter recognition by the bacteriophage N4 virion RNA polymerase. 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Nature 2009 459 393 397 3DJH 19090677 Macrophage Migration Inhibitory Factor (MIF) at 1.25 A Resolution 2008-06-23 2008-12-23 Crichlow, G.V.,Lubetsky, J.B.,Leng, L.,Bucala, R.,Lolis, E.J. Structural and kinetic analyses of macrophage migration inhibitory factor active site interactions. Biochemistry 2009 48 132 139 3EZQ 19118384 Crystal Structure of the Fas/FADD Death Domain Complex 2008-10-23 2008-12-23 Scott, F.L.,Stec, B.,Pop, C.,Dobaczewska, M.K.,Lee, J.J.,Monosov, E.,Robinson, H.,Salvesen, G.S.,Schwarzenbacher, R.,Riedl, S.J. The Fas-FADD death domain complex structure unravels signalling by receptor clustering Nature 2009 457 1019 1022 3EZQ 19118384 Crystal Structure of the Fas/FADD Death Domain Complex 2008-10-23 2008-12-23 Scott, F.L.,Stec, B.,Pop, C.,Dobaczewska, M.K.,Lee, J.J.,Monosov, E.,Robinson, H.,Salvesen, G.S.,Schwarzenbacher, R.,Riedl, S.J. 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Nat.Struct.Mol.Biol. 2009 16 114 123 3FAA 19135364 Crystal structure of TGFbRI complexed with a 2-aminoimidazole inhibitor 2008-11-16 2009-01-27 Bonafoux, D.,Chuaqui, C.,Boriack-Sjodin, P.A.,Fitch, C.,Hankins, G.,Josiah, S.,Black, C.,Hetu, G.,Ling, L.,Lee, W.C. 2-Aminoimidazoles inhibitors of TGF-beta receptor 1. Bioorg.Med.Chem.Lett. 2009 19 912 916 3G13 Crystal structure of putative conjugative transposon recombinase from Clostridium difficile 2009-01-29 2009-02-10 Bagaria, A.,Burley, S.K.,Swaminathan, S. Crystal structure of a putative conjugative transposon recombinase from Clostridium difficile To be Published 0 0 0 0 3C28 Crystal structure of the product synapse complex 2008-01-24 2009-02-17 Ghosh, K.,Van Duyne, G.D. Detailed study on Synapsis in Cre-loxP recombination reaction To be Published 0 0 0 0 3G85 Crystal structure of LacI family transcription regulator from Clostridium acetobutylicum 2009-02-11 2009-02-24 Bagaria, A.,Burley, S.K.,Swaminathan, S. Crystal structure of LacI family transcription regulator from Clostridium acetobutylicum To be Published 0 0 0 0 3G7S Crystal structure of a long-chain-fatty-acid-CoA ligase (FadD1) from Archaeoglobus fulgidus 2009-02-10 2009-03-03 Palani, K.,Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure of a long-chain-fatty-acid-CoA ligase (FadD1) from Archaeoglobus fulgidus To be Published 0 0 0 0 3FKI 19289466 12-Subunit RNA Polymerase II Refined with Zn-SAD data 2008-12-16 2009-03-10 Meyer, P.A.,Ye, P.,Suh, M.H.,Zhang, M.,Fu, J. Structure of the 12-Subunit RNA Polymerase II Refined with the Aid of Anomalous Diffraction Data J.Biol.Chem. 2009 284 12933 12939 3GBV Crystal structure of a putative LacI transcriptional regulator from Bacteroides fragilis 2009-02-20 2009-03-10 Syed Ibrahim, B.,Kumaran, D.,Burley, S.K.,Swaminathan, S. 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Biochemistry 2009 48 3407 3416 3GRA Crystal structure of AraC family transcriptional regulator from Pseudomonas putida 2009-03-25 2009-04-14 Bagaria, A.,Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure of AraC family transcriptional regulator from Pseudomonas putida To be Published 0 0 0 0 3G7T 19244332 Crystal structure of dengue virus type 1 envelope protein in the postfusion conformation 2009-02-10 2009-04-21 Nayak, V.,Dessau, M.,Kucera, K.,Anthony, K.,Ledizet, M.,Modis, Y. Crystal structure of dengue virus type 1 envelope protein in the postfusion conformation and its implications for membrane fusion. J.Virol. 2009 83 4338 4344 3CQO 20561530 Crystal structure of a f-lectin (fucolectin) from morone saxatilis (striped bass) serum 2008-04-03 2009-04-28 Bianchet, M.A.,Odom, E.W.,Vasta, G.R.,Amzel, L.M. Structure and specificity of a binary tandem domain F-lectin from striped bass (Morone saxatilis). J.Mol.Biol. 2010 401 239 252 3CXC 18947996 The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui 2008-04-24 2009-04-28 Zhou, J.,Bhattacharjee, A.,Chen, S.,Chen, Y.,Duffy, E.,Farmer, J.,Goldberg, J.,Hanselmann, R.,Ippolito, J.A.,Lou, R.,Orbin, A.,Oyelere, A.,Salvino, J.,Springer, D.,Tran, J.,Wang, D.,Wu, Y.,Johnson, G. Design at the atomic level: design of biaryloxazolidinones as potent orally active antibiotics. Bioorg.Med.Chem.Lett. 2008 18 6175 6178 3H3D 11336677 Drosophila Pumilio RNA binding domain (Puf domain) 2009-04-16 2009-04-28 Edwards, T.A.,Pyle, S.E.,Wharton, R.P.,Aggarwal, A.K. Structure of Pumilio reveals similarity between RNA and peptide binding motifs. Cell(Cambridge,Mass.) 2001 105 281 289 3H3D 11336677 Drosophila Pumilio RNA binding domain (Puf domain) 2009-04-16 2009-04-28 Edwards, T.A.,Pyle, S.E.,Wharton, R.P.,Aggarwal, A.K. Structure of Pumilio reveals similarity between RNA and peptide binding motifs. 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To be Published 0 0 0 0 3HM6 19843518 Crystal structure of the cytoplasmic domain of human plexin B1 2009-05-28 2009-06-09 Tong, Y.,Hota, P.K.,Penachioni, J.Y.,Hamaneh, M.B.,Kim, S.,Alviani, R.S.,Shen, L.,He, H.,Tempel, W.,Tamagnone, L.,Park, H.W.,Buck, M. Structure and function of the intracellular region of the plexin-b1 transmembrane receptor. J.Biol.Chem. 2009 284 35962 35972 3E35 19515238 Actinobacteria-specific protein of unknown function, SCO1997 2008-08-06 2009-06-23 Gao, B.,Sugiman-Marangos, S.,Junop, M.S.,Gupta, R.S. Structural and phylogenetic analysis of a conserved actinobacteria-specific protein (ASP1; SCO1997) from Streptomyces coelicolor. Bmc Struct.Biol. 2009 9 40 40 3I1G 20027625 Crystal structure of a GCN4 leucine zipper mutant at 1.6 A resolution 2009-06-26 2009-07-07 Diao, J. Crystal structure of a super leucine zipper, an extended two-stranded super long coiled coil. 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The crystal structure of xylulose kinase from Bifidobacterium adolescentis To be Published 0 0 0 0 3IE7 The crystal structure of phosphofructokinase (lin2199) from Listeria innocua in complex with ATP at 1.6A 2009-07-22 2009-08-04 Satyanarayana, L.,Burley, S.K.,Swaminathan, S. The crystal structure of phosphofructokinase (lin2199) from Listeria innocua in complex with ATP at 1.6A To be Published 0 0 0 0 3EEJ 19152636 Candida glabrata Dihydrofolate Reductase complexed with 2,4-diamino-5-[3-methyl-3-(3-methoxy-5-phenylphenyl)prop-1-ynyl]-6-methylpyrimidine(UCP111D) and NADPH 2008-09-04 2009-08-18 Liu, J.,Bolstad, D.B.,Smith, A.E.,Priestley, N.D.,Wright, D.L.,Anderson, A.C. Probing the active site of Candida glabrata dihydrofolate reductase with high resolution crystal structures and the synthesis of new inhibitors Chem.Biol.Drug Des. 2009 73 62 74 3EEK 19152636 Candida glabrata Dihydrofolate Reductase complexed with 2,4-diamino-5-[3-methyl-3-(3-methoxy-5-(4-methylphenyl)phenyl)prop-1-ynyl]-6-methylpyrimidine(UCP111D4M) and NADPH 2008-09-04 2009-08-18 Liu, J.,Bolstad, D.B.,Smith, A.E.,Priestley, N.D.,Wright, D.L.,Anderson, A.C. Probing the active site of Candida glabrata dihydrofolate reductase with high resolution crystal structures and the synthesis of new inhibitors Chem.Biol.Drug Des. 2009 73 62 74 3EEL 19152636 Candida glabrata Dihydrofolate Reductase complexed with 2,4-diamino-5-[3-methyl-3-(3-methoxy-5-(3,5-dimethylphenyl)phenyl)prop-1-ynyl]-6-methylpyrimidine(UCP11153TM) and NADPH 2008-09-04 2009-08-18 Liu, J.,Bolstad, D.B.,Smith, A.E.,Priestley, N.D.,Wright, D.L.,Anderson, A.C. 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Cell(Cambridge,Mass.) 2009 138 514 524 3IKH Crystal structure of Ribokinase in Complex with ATP and glycerol in the active site from Klebsiella pneumoniae 2009-08-05 2009-08-18 Satyanarayana, L.,Burley, S.K.,Swaminathan, S. Crystal structure of Ribokinase in Complex with ATP and glycerol in the active site from Klebsiella pneumoniae To be Published 0 0 0 0 3ILH Crystal structure of Two component response regulator from Cytophaga hutchinsonii 2009-08-07 2009-08-18 Syed Ibrahim, B.,Burley, S.K.,Swaminathan, S. Crystal structure of Two component response regulator from Cytophaga hutchinsonii To be Published 0 0 0 0 3IFR The crystal structure of xylulose kinase from Rhodospirillum rubrum 2009-07-24 2009-08-25 Zhang, Z.,Burley, S.K.,Swaminathan, S. The crystal structure of xylulose kinase from Rhodospirillum rubrum To be Published 0 0 0 0 3IO1 Crystal Structure of Aminobenzoyl-glutamate utilization protein from Klebsiella pneumoniae 2009-08-13 2009-08-25 Kumaran, D.,Baumann, K.,Burley, S.K.,Swaminathan, S. Crystal Structure of Aminobenzoyl-glutamate utilization protein from Klebsiella pneumoniae To be Published 0 0 0 0 3I53 19702337 Crystal structure of an O-methyltransferase (NcsB1) from neocarzinostatin biosynthesis in complex with S-adenosyl-L-homocysteine (SAH) 2009-07-03 2009-09-01 Cooke, H.A.,Guenther, E.L.,Luo, Y.,Shen, B.,Bruner, S.D. Molecular basis of substrate promiscuity for the SAM-dependent O-methyltransferase NcsB1, involved in the biosynthesis of the enediyne antitumor antibiotic neocarzinostatin. Biochemistry 2009 48 9590 9598 3I58 19702337 Crystal structure of an O-methyltransferase (NcsB1) from neocarzinostatin biosynthesis in complex with S-adenosyl-L-homocysteine (SAH) and 2-hydroxy-7-methoxy-5-methyl naphthoic acid (NA) 2009-07-03 2009-09-01 Cooke, H.A.,Guenther, E.L.,Luo, Y.,Shen, B.,Bruner, S.D. Molecular basis of substrate promiscuity for the SAM-dependent O-methyltransferase NcsB1, involved in the biosynthesis of the enediyne antitumor antibiotic neocarzinostatin. Biochemistry 2009 48 9590 9598 3I5U 19702337 Crystal structure of an O-methyltransferase (NcsB1) from neocarzinostatin biosynthesis in complex with S-adenosylmethionine (SAM) and 2-hydroxy-5-methyl naphthoic acid (MNA) 2009-07-06 2009-09-01 Cooke, H.A.,Guenther, E.L.,Luo, Y.,Shen, B.,Bruner, S.D. Molecular basis of substrate promiscuity for the SAM-dependent O-methyltransferase NcsB1, involved in the biosynthesis of the enediyne antitumor antibiotic neocarzinostatin. Biochemistry 2009 48 9590 9598 3I64 19702337 Crystal structure of an O-methyltransferase (NcsB1) from neocarzinostatin biosynthesis in complex with S-adenosyl-L-homocysteine (SAH) and 1,4-dihydroxy-2-naphthoic acid (DHN) 2009-07-06 2009-09-01 Cooke, H.A.,Guenther, E.L.,Luo, Y.,Shen, B.,Bruner, S.D. Molecular basis of substrate promiscuity for the SAM-dependent O-methyltransferase NcsB1, involved in the biosynthesis of the enediyne antitumor antibiotic neocarzinostatin. Biochemistry 2009 48 9590 9598 3H90 19749753 Structural basis for the autoregulation of the zinc transporter YiiP 2009-04-29 2009-09-08 Lu, M.,Chai, J.,Fu, D. Structural basis for autoregulation of the zinc transporter YiiP. Nat.Struct.Mol.Biol. 2009 16 1063 1067 3H90 19749753 Structural basis for the autoregulation of the zinc transporter YiiP 2009-04-29 2009-09-08 Lu, M.,Chai, J.,Fu, D. Structural basis for autoregulation of the zinc transporter YiiP. 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Crystal structure of a putative Ribokinase in complex with ADP from E.coli To be Published 0 0 0 0 3IN5 19492058 Structure of human DNA polymerase kappa inserting dATP opposite an 8-oxoG DNA lesion 2009-08-11 2009-09-08 Vasquez-Del Carpio, R.,Silverstein, T.D.,Lone, S.,Swan, M.K.,Choudhury, J.R.,Johnson, R.E.,Prakash, S.,Prakash, L.,Aggarwal, A.K. Structure of human DNA polymerase kappa inserting dATP opposite an 8-oxoG DNA lesion PLOS ONE 2009 4 0 0 3IQ0 Crystal structure of a putative Ribokinase II in complex with ATP and Mg+2 from E.coli 2009-08-18 2009-09-08 Satyanarayana, L.,Burley, S.K.,Swaminathan, S. Crystal structure of a putative Ribokinase (II)in complex with ATP and Mg+2 from E.coli To be Published 0 0 0 0 3HTM 19818708 Structures of SPOP-Substrate Complexes: Insights into Molecular Architectures of BTB-Cul3 Ubiquitin Ligases: SPOPBTB/3-box 2009-06-11 2009-10-20 Zhuang, M.,Calabrese, M.F.,Liu, J.,Waddell, M.B.,Nourse, A.,Hammel, M.,Miller, D.J.,Walden, H.,Duda, D.M.,Seyedin, S.N.,Hoggard, T.,Harper, J.W.,White, K.P.,Schulman, B.A. Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol.Cell 2009 36 39 50 3FP9 19836337 Crystal structure of Intern Domain of proteasome-associated ATPase, Mycobacterium tuberculosis 2009-01-04 2009-10-27 Wang, T.,Li, H.,Lin, G.,Tang, C.,Li, D.,Nathan, C.,Darwin, K.H.,Li, H. Structural Insights on the Mycobacterium tuberculosis Proteasomal ATPase Mpa. 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J.Am.Chem.Soc. 2009 131 14932 14937 3JSE 19889631 Crystal structure of archaeal 20S proteasome in complex with mutated P26 activator 2009-09-10 2009-11-03 Stadtmueller, B.M.,Ferrell, K.,Whitby, F.G.,Heroux, A.,Robinson, H.,Myszka, D.G.,Hill, C.P. Structural models for interactions between the 20S proteasome and its PAN/19S activators. J.Biol.Chem. 2010 285 13 17 3KD6 Crystal Structure of Nucleoside Kinase from Chlorobium tepidum in Complex with AMP 2009-10-22 2009-11-03 Satyanarayana, L.,Burley, S.K.,Swaminathan, S. Crystal Structure of Nucleoside Kinase from Chlorobium tepidum in Complex with AMP To be Published 0 0 0 0 3GPU 20010681 MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC4-loop deletion complex 2009-03-23 2009-11-10 Qi, Y.,Spong, M.C.,Nam, K.,Banerjee, A.,Jiralerspong, S.,Karplus, M.,Verdine, G.L. Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme. Nature 2009 462 762 766 3GPX 20010681 Sequence-matched MutM Interrogation Complex 4 (IC4) 2009-03-23 2009-11-10 Qi, Y.,Spong, M.C.,Nam, K.,Banerjee, A.,Jiralerspong, S.,Karplus, M.,Verdine, G.L. Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme. Nature 2009 462 762 766 3K9E Crystal structure of a putative Ribokinase II (Apo Form) from E.coli 2009-10-15 2009-11-10 Satyanarayana, L.,Burley, S.K.,Swaminathan, S. Crystal structure of a putative Ribokinase II (Apo Form) from E.coli To be Published 0 0 0 0 3KCM The crystal structure of thioredoxin protein from Geobacter metallireducens 2009-10-21 2009-11-10 Zhang, Z.,Burley, S.K.,Swaminathan, S. The crystal structure of thioredoxin protein from Geobacter metallireducens To be Published 0 0 0 0 3KHT Crystal structure of response regulator from Hahella chejuensis 2009-10-30 2009-11-10 Bagaria, A.,Burley, S.K.,Swaminathan, S. Crystal structure of response regulator from Hahella chejuensis To be Published 0 0 0 0 2W3W MYCOBACTERIUM AVIUM DIHYDROFOLATE REDUCTASE COMPLEXED WITH NADPH AND A LIPOPHILIC ANTIFOLATE SELECTIVE FOR M. AVIUM DHFR, 6-((2,5- DIETHOXYPHENYL)AMINOMETHYL)-2,4-DIAMINO-5-METHYLPYRIDO(2,3-D) PYRIMIDINE (SRI-8686) 2008-11-16 2009-11-17 Leung, A.K.W.,Ross, L.J.,Zywno-Van Ginkel, S.,Reynolds, R.C.,Seitz, L.E.,Pathak, V.,Barrow, W.W.,White, E.L.,Suling, W.J.,Piper, J.R.,Borhani, D.W. Structural Basis for Selective Inhibition of Mycobacterium Avium Dihydrofolate Reductase by a Lipophilic Antifolate To be Published 0 0 0 0 3G8L 19818651 Crystal structure of murine natural killer cell receptor, Ly49L4 2009-02-12 2009-11-17 Back, J.,Malchiodi, E.L.,Cho, S.,Scarpellino, L.,Schneider, P.,Kerzic, M.C.,Mariuzza, R.A.,Held, W. Distinct conformations of Ly49 natural killer cell receptors mediate MHC class I recognition in trans and cis. Immunity 2009 31 598 608 3JT2 19890331 Cu(II) N47S/M121L variant of Pseudomonas Aeruginosa azurin 2009-09-11 2009-11-17 Marshall, N.M.,Garner, D.K.,Wilson, T.D.,Gao, Y.G.,Robinson, H.,Nilges, M.J.,Lu, Y. Rationally tuning the reduction potential of a single cupredoxin beyond the natural range. Nature 2009 462 113 116 3JTB 19890331 Cu(II) N47S/F114N variant of Pseudomonas Aeruginosa Azurin 2009-09-11 2009-11-17 Marshall, N.M.,Garner, D.K.,Wilson, T.D.,Gao, Y.G.,Robinson, H.,Nilges, M.J.,Lu, Y. Rationally tuning the reduction potential of a single cupredoxin beyond the natural range. Nature 2009 462 113 116 3K6N 19915587 Crystal structure of the S225E mutant Kir3.1 cytoplasmic pore domain 2009-10-09 2009-11-17 Xu, Y.,Shin, H.G.,Szep, S.,Lu, Z. Physical determinants of strong voltage sensitivity of K(+) channel block. Nat.Struct.Mol.Biol. 2009 16 1252 1258 3KJX Crystal structure of a transcriptional regulator, Lacl family protein from Silicibacter pomeroyi 2009-11-03 2009-11-17 Palani, K.,Burley, S.K.,Swaminathan, S. Crystal structure of a transcriptional regulator, Lacl family protein from Silicibacter pomeroyi To be Published 0 0 0 0 3HG3 19940122 Human alpha-galactosidase catalytic mechanism 2. Substrate bound 2009-05-13 2009-11-24 Guce, A.I.,Clark, N.E.,Salgado, E.N.,Ivanen, D.R.,Kulminskaya, A.A.,Brumer, H.,Garman, S.C. Catalytic mechanism of human alpha-galactosidase. J.Biol.Chem. 2010 285 3625 3632 3K8X 19926852 Crystal structure of the carboxyltransferase domain of acetyl-coenzyme A carboxylase in complex with tepraloxydim 2009-10-15 2009-12-01 Xiang, S.,Callaghan, M.M.,Watson, K.G.,Tong, L. A different mechanism for the inhibition of the carboxyltransferase domain of acetyl-coenzyme A carboxylase by tepraloxydim. Proc.Natl.Acad.Sci.USA 2009 106 20723 20727 3KBC 19924125 Crystal structure of GltPh K55C-A364C mutant crosslinked with divalent mercury 2009-10-20 2009-12-01 Reyes, N.,Ginter, C.,Boudker, O. Transport mechanism of a bacterial homologue of glutamate transporters. Nature 2009 462 880 885 3JPW 19910922 Crystal structure of amino terminal domain of the NMDA receptor subunit NR2B 2009-09-04 2009-12-08 Karakas, E.,Simorowski, N.,Furukawa, H. Structure of the zinc-bound amino-terminal domain of the NMDA receptor NR2B subunit. Embo J. 2009 28 3910 3920 3JPY 19910922 Crystal structure of the zinc-bound amino terminal domain of the NMDA receptor subunit NR2B 2009-09-04 2009-12-08 Karakas, E.,Simorowski, N.,Furukawa, H. Structure of the zinc-bound amino-terminal domain of the NMDA receptor NR2B subunit. Embo J. 2009 28 3910 3920 3H00 19846514 Structure of the C-terminal Domain of a Putative HIV-1 gp41 Fusion Intermediate 2009-04-08 2009-12-15 Liu, J.,Deng, Y.,Li, Q.,Dey, A.K.,Moore, J.P.,Lu, M. Role of a putative gp41 dimerization domain in human immunodeficiency virus type 1 membrane fusion. J.Virol. 2010 84 201 209 3KLY 20010838 Pentameric formate channel 2009-11-09 2009-12-15 Waight, A.B.,Love, J.,Wang, D.N. Structure and mechanism of a pentameric formate channel Nat.Struct.Mol.Biol. 2010 17 31 37 3KLZ 20010838 Pentameric formate channel with formate bound 2009-11-09 2009-12-15 Waight, A.B.,Love, J.,Wang, D.N. Structure and mechanism of a pentameric formate channel Nat.Struct.Mol.Biol. 2010 17 31 37 3KSM Crystal structure of ABC-type sugar transport system, periplasmic component from Hahella chejuensis 2009-11-23 2009-12-15 Bagaria, A.,Kumaran, D.,Burley, S.K.,Swaminathan, S. Crystal structure of ABC-type sugar transport system, periplasmic component from Hahella chejuensis To be Published 0 0 0 0 3KTN Crystal Structure of a putative 2-Keto-3-deoxygluconate Kinase from Enterococcus faecalis 2009-11-25 2009-12-15 Satyanarayana, L.,Burley, S.K.,Swaminathan, S. Crystal Structure of a putative 2-Keto-3-deoxygluconate Kinase from Enterococcus faecalis To be Published 0 0 0 0 3KCF 19914068 Crystal structure of TGFbRI complexed with a pyrazolone inhibitor 2009-10-21 2009-12-22 Guckian, K.,Carter, M.B.,Lin, E.Y.,Choi, M.,Sun, L.,Boriack-Sjodin, P.A.,Chuaqui, C.,Lane, B.,Cheung, K.,Ling, L.,Lee, W.C. Pyrazolone based TGFbetaR1 kinase inhibitors. Bioorg.Med.Chem.Lett. 2010 20 326 329 3L3C 19228039 Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6P 2009-12-16 2009-12-29 Cochrane, J.C.,Lipchock, S.V.,Smith, K.D.,Strobel, S.A. Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme Biochemistry 2009 48 3239 3246 3FH5 19950900 Leukotriene A4 Hydrolase complexed with inhibitor (2R)-2-[(4-benzylphenoxy)methyl]pyrrolidine. 2008-12-08 2010-01-05 Sandanayaka, V.,Mamat, B.,Mishra, R.K.,Winger, J.,Krohn, M.,Zhou, L.M.,Keyvan, M.,Enache, L.,Sullins, D.,Onua, E.,Zhang, J.,Halldorsdottir, G.,Sigthorsdottir, H.,Thorlaksdottir, A.,Sigthorsson, G.,Thorsteinnsdottir, M.,Davies, D.R.,Stewart, L.J.,Zembower, D.E.,Andresson, T.,Kiselyov, A.S.,Singh, J.,Gurney, M.E. Discovery of 4-[(2S)-2-{[4-(4-chlorophenoxy)phenoxy]methyl}-1-pyrrolidinyl]butanoic acid (DG-051) as a novel leukotriene A4 hydrolase inhibitor of leukotriene B4 biosynthesis. J.Med.Chem. 2010 53 573 585 3FH7 19950900 Leukotriene A4 Hydrolase complexed with inhibitor 4-[(2S)-2-{[4-(4-chlorophenoxy)phenoxy]methyl}pyrrolidin-1-yl]butanoate. 2008-12-08 2010-01-05 Sandanayaka, V.,Mamat, B.,Mishra, R.K.,Winger, J.,Krohn, M.,Zhou, L.M.,Keyvan, M.,Enache, L.,Sullins, D.,Onua, E.,Zhang, J.,Halldorsdottir, G.,Sigthorsdottir, H.,Thorlaksdottir, A.,Sigthorsson, G.,Thorsteinnsdottir, M.,Davies, D.R.,Stewart, L.J.,Zembower, D.E.,Andresson, T.,Kiselyov, A.S.,Singh, J.,Gurney, M.E. Discovery of 4-[(2S)-2-{[4-(4-chlorophenoxy)phenoxy]methyl}-1-pyrrolidinyl]butanoic acid (DG-051) as a novel leukotriene A4 hydrolase inhibitor of leukotriene B4 biosynthesis. J.Med.Chem. 2010 53 573 585 3L0Q The crystal structure of xlylulose kinase from Yersinia pseudotuberculosis 2009-12-10 2010-01-05 Zhang, Z.,Burley, S.K.,Swaminathan, S. The crystal structure of xylulose kinase from Yersinia pseudotuberculosis To be Published 0 0 0 0 3HEQ 19927125 Human prion protein variant D178N with M129 2009-05-10 2010-01-12 Lee, S.,Antony, L.,Hartmann, R.,Knaus, K.J.,Surewicz, K.,Surewicz, W.K.,Yee, V.C. Conformational diversity in prion protein variants influences intermolecular beta-sheet formation. Embo J. 2010 29 251 262 3HES 19927125 Human prion protein variant F198S with M129 2009-05-10 2010-01-12 Lee, S.,Antony, L.,Hartmann, R.,Knaus, K.J.,Surewicz, K.,Surewicz, W.K.,Yee, V.C. Conformational diversity in prion protein variants influences intermolecular beta-sheet formation. Embo J. 2010 29 251 262 3IOY Structure of putative short-chain dehydrogenase (Saro_0793) from Novosphingobium aromaticivorans 2009-08-15 2010-01-19 Ramagopal, U.A.,Morano, C.,Burley, S.K.,Almo, S.C. Structure of putative short-chain dehydrogenase (Saro_0793) from Novosphingobium aromaticivorans To be published 0 0 0 0 3IG1 20004166 HIV-1 Reverse Transcriptase with the Inhibitor beta-Thujaplicinol Bound at the RNase H Active Site 2009-07-27 2010-01-26 Himmel, D.M.,Maegley, K.A.,Pauly, T.A.,Bauman, J.D.,Das, K.,Dharia, C.,Clark, A.D.,Ryan, K.,Hickey, M.J.,Love, R.A.,Hughes, S.H.,Bergqvist, S.,Arnold, E. Structure of HIV-1 reverse transcriptase with the inhibitor beta-Thujaplicinol bound at the RNase H active site. Structure 2009 17 1625 1635 3KVN 20060837 Crystal structure of the full-length autotransporter EstA from Pseudomonas aeruginosa 2009-11-30 2010-01-26 van den Berg, B. Crystal structure of a full-length autotransporter. J.Mol.Biol. 2010 396 627 633 3FT6 Crystal Structure of Proflavine in Complex with a DNA hexamer duplex 2009-01-12 2010-02-02 Maehigashi, T.,Persil, O.,Hud, N.V.,Williams, L.D. Crystal Structure of Proflavine in Complex with a DNA hexamer duplex To be Published 0 0 0 0 3L8F 20050614 Crystal Structure of D,D-heptose 1.7-bisphosphate phosphatase from E. Coli complexed with magnesium and phosphate 2009-12-31 2010-02-02 Nguyen, H.H.,Wang, L.,Huang, H.,Peisach, E.,Dunaway-Mariano, D.,Allen, K.N. Structural Determinants of Substrate Recognition in the HAD Superfamily Member d-glycero-d-manno-Heptose-1,7-bisphosphate Phosphatase (GmhB) . Biochemistry 2010 49 1082 1092 3L8X 18359226 P38 alpha kinase complexed with a pyrazolo-pyrimidine based inhibitor 2010-01-04 2010-03-02 Das, J.,Moquin, R.V.,Pitt, S.,Zhang, R.,Shen, D.R.,Mcintyre, K.W.,Gillooly, K.,Doweyko, A.M.,Sack, J.S.,Zhang, H.,Kiefer, S.E.,Kish, K.,Mckinnon, M.,Barrish, J.C.,Dodd, J.H.,Schieven, G.L.,Leftheris, K. Pyrazolo-Pyrimidines: A Novel Heterocyclic Scaffold for Potent and Selective P38 Alpha Inhibitors. Bioorg.Med.Chem.Lett. 2008 18 2652 0 3H6M Crystal structure of Staphylococcal nuclease variant Delta+PHS V104E at cryogenic temperature 2009-04-23 2010-03-09 Khangulov, V.S.,Schlessman, J.L.,Heroux, A.,Garcia-Moreno, E.B. Crystal structure of Staphylococcal nuclease variant Delta+PHS V104E at cryogenic temperature To be Published 0 0 0 0 3KZB Crystal structure of xylulokinase from Chromobacterium violaceum 2009-12-08 2010-03-09 Zhang, Z.,Burley, S.K.,Swaminathan, S. Crystal structure of xylulokinase from Chromobacterium violaceum To be Published 0 0 0 0 3LJS Crystal structure of Fructokinase from Xylella fastidiosa 2010-01-26 2010-03-09 Satyanarayana, L.,Burley, S.K.,Swaminathan, S. Crystal structure of Fructokinase from Xylella fastidiosa To be Published 0 0 0 0 3LKI Crystal Structure of Fructokinase with bound ATP from Xylella fastidiosa 2010-01-27 2010-03-09 Satyanarayana, L.,Burley, S.K.,Swaminathan, S. Crystal Structure of Fructokinase with bound ATP from Xylella fastidiosa To be Published 0 0 0 0 3M3M Crystal structure of glutathione S-transferase from Pseudomonas fluorescens [Pf-5] 2010-03-09 2010-03-16 Bagaria, A.,Burley, S.K.,Swaminathan, S. Crystal structure of glutathione S-transferase from Pseudomonas fluorescens [Pf-5] To be Published 0 0 0 0 3LL3 The crystal structure of ligand bound xylulose kinase from Lactobacillus acidophilus 2010-01-28 2010-03-23 Zhang, Z.,Burley, S.K.,Swaminathan, S. The crystal structure of xylulose kinase from Lactobacillus acidophilus To be Published 0 0 0 0 3LSZ Crystal structure of glutathione s-transferase from Rhodobacter sphaeroides 2010-02-14 2010-03-23 Eswaramoorthy, S.,Burley, S.K.,Swaminathan, S. Crystal structure of glutathione s-transferase from Rhodobacter sphaeroides To be Published 0 0 0 0 3M1Y Crystal Structure of a Phosphoserine phosphatase (SerB) from Helicobacter pylori 2010-03-05 2010-03-23 Syed Ibrahim, B.,Burley, S.K.,Swaminathan, S. Crystal Structure of a Phosphoserine phosphatase (SerB) from Helicobacter pylori To be Published 0 0 0 0 3KYL 20357774 Structure of the catalytic subunit of telomerase bound to its RNA template and telomeric DNA 2009-12-06 2010-03-31 Mitchell, M.,Gillis, A.,Futahashi, M.,Fujiwara, H.,Skordalakes, E. Structural basis for telomerase catalytic subunit TERT binding to RNA template and telomeric DNA. Nat.Struct.Mol.Biol. 2010 17 513 518 3M2P The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus 2010-03-08 2010-04-07 Zhang, Z.,Burley, S.K.,Swaminathan, S. The crystal structure of UDP-N-acetylglucosamine 4-epimerase from Bacillus cereus To be Published 0 0 0 0 2WD0 20399731 CRYSTAL STRUCTURE OF NONSYNDROMIC DEAFNESS (DFNB12) ASSOCIATED MUTANT D124G OF MOUSE CADHERIN-23 EC1-2 2009-03-18 2010-04-21 Sotomayor, M.,Weihofen, W.,Gaudet, R.,Corey, D.P. Structural Determinants of Cadherin-23 Function in Hearing and Deafness. Neuron 2010 66 85 0 3MIZ Crystal structure of a putative transcriptional regulator protein, Lacl family from Rhizobium etli 2010-04-12 2010-04-21 Palani, K.,Burley, S.K.,Swaminathan, S. 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Domain swapping promoted by a single mutation that introduces an ionizable group into the hydrophobic core of a protein To be Published 0 0 0 0 3MKA 20461058 Crystal Structure of Mycobacterium Tuberculosis Proteasome with propetide and an T1A mutation at beta-subunit 2010-04-14 2010-05-26 Li, D.,Li, H.,Wang, T.,Pan, H.,Lin, G.,Li, H. Structural basis for the assembly and gate closure mechanisms of the Mycobacterium tuberculosis 20S proteasome. Embo J. 2010 29 2037 2047 3MKA 20461058 Crystal Structure of Mycobacterium Tuberculosis Proteasome with propetide and an T1A mutation at beta-subunit 2010-04-14 2010-05-26 Li, D.,Li, H.,Wang, T.,Pan, H.,Lin, G.,Li, H. Structural basis for the assembly and gate closure mechanisms of the Mycobacterium tuberculosis 20S proteasome. Embo J. 2010 29 2037 2047 3MFE 20461058 Crystal Structure of Mycobacterium Tuberculosis Proteasome open-gate mutant with H0 movement 2010-04-02 2010-06-23 Li, D.,Li, H.,Wang, T.,Pan, H.,Lin, G.,Li, H. Structural basis for the assembly and gate closure mechanisms of the Mycobacterium tuberculosis 20S proteasome. Embo J. 2010 0 0 0 3MZ4 20545365 Crystal structure of D101L Mn2+ HDAC8 complexed with M344 2010-05-11 2010-06-23 Dowling, D.P.,Gattis, S.G.,Fierke, C.A.,Christianson, D.W. Structures of metal-substituted human histone deacetylase 8 provide mechanistic inferences on biological function. Biochemistry 2010 49 5048 5056 3MVB 20550934 Crystal structure of a triple RFY mutant of human MTERF1 bound to the termination sequence 2010-05-03 2010-06-30 Yakubovskaya, E.,Mejia, E.,Byrnes, J.,Hambardjieva, E.,Garcia-Diaz, M. Helix unwinding and base flipping enable human MTERF1 to terminate mitochondrial transcription. Cell(Cambridge,Mass.) 2010 141 982 993 3KDY 20577998 X-ray crystal structure of tyrosine aminomutase mutant construct 2009-10-23 2010-07-07 Cooke, H.A.,Bruner, S.D. 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An Active Site Water Network in the Plasminogen Activator Pla from Yersinia Pestis Structure 2010 18 809 0 3LG4 20643959 Staphylococcus aureus V31Y, F92I mutant dihydrofolate reductase complexed with NADPH and 5-[(3S)-3-(5-methoxy-2',6'-dimethylbiphenyl-3-yl)but-1-yn-1-yl]-6-methylpyrimidine-2,4-diamine 2010-07-08 2010-07-28 Frey, K.M.,Georgiev, I.,Donald, B.R.,Anderson, A.C. Predicting resistance mutations using protein design algorithms. Proc.Natl.Acad.Sci.USA 2010 107 13707 13712 3IEI Crystal structure of human leucine carboxylmethyltransferase-1 in complex with S-adenosyl homocysteine 2009-07-22 2010-08-11 Stanevich, V.,Jiang, L.,Satyshur, K.A.,Li, Y.,Jeffrey, P.D.,Li, Z.,Semmelhack, M.F.,Xing, Y. Structural Insights into Novel Functions of a pro-survival PP2A-specific Methyltransferase To be Published 0 0 0 0 3IQM 23167435 Active site mutants of B. subtilis SecA 2009-08-20 2010-08-11 Kim, D.M.,Zheng, H.,Huang, Y.J.,Montelione, G.T.,Hunt, J.F. 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Resolution of disulfide heterogeneity in Nogo receptor 1 fusion proteins by molecular engineering. Biotechnol Appl Biochem 2010 57 31 45 3OR5 Crystal structure of thiol:disulfide interchange protein, thioredoxin family protein from Chlorobium tepidum TLS 2010-09-06 2010-09-22 Bagaria, A.,Burley, S.K.,Swaminathan, S. Crystal structure of thiol:disulfide interchange protein, thioredoxin family protein from Chlorobium tepidum TLS TO BE PUBLISHED 0 0 0 0 3JWK Crystal structure of Bacillus anthracis (Y102F) dihydrofolate reductase complexed with NADPH and (S)-2,4-diamino-5-(3-methoxy-3-(3,4,5-trimethoxyphenyl)prop-1-ynyl)-6-methylpyrimidine (UCP114A) 2009-09-18 2010-09-29 Beierlein, J.M.,Karri, N.G.,Anderson, A.C. 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Crystal structure of Staphylococcal nuclease variant Delta+PHS I92AL103A at cryogenic temperature To be Published 0 0 0 0 3RND W116I-OYE1 complexed with 2-(Hydroxymethyl)-cyclopent-2-enone 2011-04-22 2011-08-03 Walton, A.Z.,Conerly, W.C.,Pompeu, Y.A.,Sullivan, B.T.,Stewart, J.D. Biocatalytic Reductions of Baylis-Hillman Adducts ACS Catalysis 2011 0 0 0 3T13 Crystal structure of Staphylococcal nuclease variant Delta+PHS A69G at cryogenic temperature 2011-07-21 2011-08-03 Doctrow, B.M.,Schlessman, J.L.,Garcia-Moreno E., B. Crystal structure of Staphylococcal nuclease variant Delta+PHS A69G at cryogenic temperature To be Published 0 0 0 0 3T16 Crystal structure of Staphylococcal nuclease variant NVIAGA/M98G at cryogenic temperature 2011-07-21 2011-08-03 Baran, K.L.,Doctrow, B.M.,Chimenti, M.,Herbst, K.,Fitch, C.A.,Majumdar, A.,Schlessman, J.L.,Garcia-Moreno E., B. 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J.Am.Chem.Soc. 2011 133 14017 14026 3RYV 21790183 Carbonic Anhydrase complexed with N-ethyl-4-sulfamoylbenzamide 2011-05-11 2011-08-10 Mecinovic, J.,Snyder, P.W.,Mirica, K.A.,Bai, S.,Mack, E.T.,Kwant, R.L.,Moustakas, D.T.,Heroux, A.,Whitesides, G.M. Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the ""hydrophobic wall"" of carbonic anhydrase. J.Am.Chem.Soc. 2011 133 14017 14026 3RYX 21790183 Fluoroalkyl and Alkyl Chains Have Similar Hydrophobicities in Binding to the Hydrophobic Wall of Carbonic Anhydrase 2011-05-11 2011-08-10 Mecinovic, J.,Snyder, P.W.,Mirica, K.A.,Bai, S.,Mack, E.T.,Kwant, R.L.,Moustakas, D.T.,Heroux, A.,Whitesides, G.M. Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the ""hydrophobic wall"" of carbonic anhydrase. J.Am.Chem.Soc. 2011 133 14017 14026 3RYY 21790183 Fluoroalkyl and Alkyl Chains Have Similar Hydrophobicities in Binding to the Hydrophobic Wall of Carbonic Anhydrase 2011-05-11 2011-08-10 Mecinovic, J.,Snyder, P.W.,Mirica, K.A.,Bai, S.,Mack, E.T.,Kwant, R.L.,Moustakas, D.T.,Heroux, A.,Whitesides, G.M. Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the ""hydrophobic wall"" of carbonic anhydrase. J.Am.Chem.Soc. 2011 133 14017 14026 3RYZ 21790183 Fluoroalkyl and Alkyl Chains Have Similar Hydrophobicities in Binding to the Hydrophobic Wall of Carbonic Anhydrase 2011-05-11 2011-08-10 Mecinovic, J.,Snyder, P.W.,Mirica, K.A.,Bai, S.,Mack, E.T.,Kwant, R.L.,Moustakas, D.T.,Heroux, A.,Whitesides, G.M. Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the ""hydrophobic wall"" of carbonic anhydrase. J.Am.Chem.Soc. 2011 133 14017 14026 3RZ0 21790183 Fluoroalkyl and Alkyl Chains Have Similar Hydrophobicities in Binding to the Hydrophobic Wall of Carbonic Anhydrase 2011-05-11 2011-08-10 Mecinovic, J.,Snyder, P.W.,Mirica, K.A.,Bai, S.,Mack, E.T.,Kwant, R.L.,Moustakas, D.T.,Heroux, A.,Whitesides, G.M. Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the ""hydrophobic wall"" of carbonic anhydrase. J.Am.Chem.Soc. 2011 133 14017 14026 3RZ1 21790183 Fluoroalkyl and Alkyl Chains Have Similar Hydrophobicities in Binding to the Hydrophobic Wall of Carbonic Anhydrase 2011-05-11 2011-08-10 Mecinovic, J.,Snyder, P.W.,Mirica, K.A.,Bai, S.,Mack, E.T.,Kwant, R.L.,Moustakas, D.T.,Heroux, A.,Whitesides, G.M. Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the ""hydrophobic wall"" of carbonic anhydrase. J.Am.Chem.Soc. 2011 133 14017 14026 3RZ5 21790183 Fluoroalkyl and Alkyl Chains Have Similar Hydrophobicities in Binding to the Hydrophobic Wall of Carbonic Anhydrase 2011-05-11 2011-08-10 Mecinovic, J.,Snyder, P.W.,Mirica, K.A.,Bai, S.,Mack, E.T.,Kwant, R.L.,Moustakas, D.T.,Heroux, A.,Whitesides, G.M. Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the ""hydrophobic wall"" of carbonic anhydrase. J.Am.Chem.Soc. 2011 133 14017 14026 3RZ7 21790183 Fluoroalkyl and Alkyl Chains Have Similar Hydrophobicities in Binding to the Hydrophobic Wall of Carbonic Anhydrase 2011-05-11 2011-08-10 Mecinovic, J.,Snyder, P.W.,Mirica, K.A.,Bai, S.,Mack, E.T.,Kwant, R.L.,Moustakas, D.T.,Heroux, A.,Whitesides, G.M. Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the ""hydrophobic wall"" of carbonic anhydrase. J.Am.Chem.Soc. 2011 133 14017 14026 3RZ8 21790183 Fluoroalkyl and Alkyl Chains Have Similar Hydrophobicities in Binding to the Hydrophobic Wall of Carbonic Anhydrase 2011-05-11 2011-08-10 Mecinovic, J.,Snyder, P.W.,Mirica, K.A.,Bai, S.,Mack, E.T.,Kwant, R.L.,Moustakas, D.T.,Heroux, A.,Whitesides, G.M. Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the ""hydrophobic wall"" of carbonic anhydrase. J.Am.Chem.Soc. 2011 133 14017 14026 3S9L 21788477 Complex between transferrin receptor 1 and transferrin with iron in the N-Lobe, cryocooled 2 2011-06-01 2011-08-10 Eckenroth, B.E.,Steere, A.N.,Chasteen, N.D.,Everse, S.J.,Mason, A.B. How the binding of human transferrin primes the transferrin receptor potentiating iron release at endosomal pH. Proc.Natl.Acad.Sci.USA 2011 108 13089 13094 3SSZ The crystal structure of Mandelate racemase/muconate lactonizing enzyme from Rhodobacteraceae bacterium 2011-07-08 2011-08-17 Zhang, Z.,Almo, S.C.,Swaminathan, S. The crystal structure of Mandelate racemase/muconate lactonizing enzyme from Rhodobacteraceae bacterium To be Published 0 0 0 0 3T69 Crystal structure of a putative 2-dehydro-3-deoxygalactonokinase protein from Sinorhizobium meliloti 2011-07-28 2011-08-17 Agarwal, R.,Almo, S.C.,Swaminathan, S. Crystal structure of a putative 2-dehydro-3-deoxygalactonokinase protein from Sinorhizobium meliloti To be Published 0 0 0 0 3SPI 21874019 Inward rectifier potassium channel Kir2.2 in complex with PIP2 2011-07-01 2011-08-24 Hansen, S.B.,Tao, X.,Mackinnon, R. Structural basis of PIP(2) activation of the classical inward rectifier K(+) channel Kir2.2. Nature 2011 477 495 498 2YIE 21745821 Crystal structure of a F. nucleatum FMN riboswitch bound to FMN 2011-05-12 2011-08-31 Vicens, Q.,Mondragon, E.,Batey, R.T. Molecular Sensing by the Aptamer Domain of the Fmn Riboswitch: A General Model for Ligand Binding by Conformational Selection Nucleic Acids Res. 2011 39 8586 0 3SE7 21881561 ancient VanA 2011-06-10 2011-09-14 D'Costa, V.M.,King, C.E.,Kalan, L.,Morar, M.,Sung, W.W.,Schwarz, C.,Froese, D.,Zazula, G.,Calmels, F.,Debruyne, R.,Golding, G.B.,Poinar, H.N.,Wright, G.D. Antibiotic resistance is ancient. Nature 2011 477 457 461 3T8Y 21816169 Crystal structure of the response regulator domain of Thermotoga maritima CheB 2011-08-02 2011-09-14 Park, S.Y.,Crane, B.R. Structural insight into the low affinity between Thermotoga maritima CheA and CheB compared to their Escherichia coli/Salmonella typhimurium counterparts Int.J.Biol.Macromol. 2011 49 794 800 3TME Crystal structure of Staphylococcal nuclease variant Delta+NVIAGLA V23E at cryogenic temperature 2011-08-31 2011-09-14 Robinson, A.C.,Schlessman, J.L.,Majumdar, A.,Garcia-Moreno E., B. Crystal structure of Staphylococcal nuclease variant Delta+NVIAGLA V23E at cryogenic temperature To be Published 0 0 0 0 3OSO 22496593 Crystal structure of Staphylococcal nuclease variant Delta+PHS L25A at cryogenic temperature 2010-09-09 2011-09-21 Roche, J.,Caro, J.A.,Norberto, D.R.,Barthe, P.,Roumestand, C.,Schlessman, J.L.,Garcia, A.E.,Garcia-Moreno E, B.,Royer, C.A. Cavities determine the pressure unfolding of proteins. Proc.Natl.Acad.Sci.USA 2012 109 6945 6950 3TP8 Crystal structure of Staphylococcal nuclease variant Delta+PHS L36E at cryogenic temperature 2011-09-07 2011-09-21 Robinson, A.C.,Schlessman, J.L.,Garcia-Moreno E., B. Crystal structure of Staphylococcal nuclease variant Delta+PHS L36E at cryogenic temperature To be Published 0 0 0 0 3TGO 21937441 Crystal structure of the E. coli BamCD complex 2011-08-17 2011-09-28 Kim, K.H.,Aulakh, S.,Paetzel, M. Crystal structure of the beta-barrel assembly machinery BamCD protein complex J.Biol.Chem. 2011 286 39116 39121 3P1H Crystal structure of Staphylococcal nuclease variant Delta+PHS V23K/I92A at cryogenic temperature 2010-09-30 2011-10-05 Caro, J.A.,Clark, I.A.,Sue, G.,Schlessman, J.L.,Garcia-Moreno E, B. Pressure unfolding effects of artificial cavities in proteins. To be Published 0 0 0 0 3TX9 OYE1 complexed with 2-(Hydroxymethyl)-cyclopent-2-enone 2011-09-22 2011-10-05 Pompeu, Y.A.,Stewart, J.D. Studies of Enantioselectivity in OYE1 To be Published 0 0 0 0 3P6I Crystal structure of Symfoil-4T Permutation #2: de novo designed beta-trefoil architecture with symmetric primary structure 2010-10-11 2011-10-12 Blaber, M.,Lee, J. Permutations study of de novo designed symmetric beta-trefoil architecture To be Published 0 0 0 0 3P6J Crystal structure of Symfoil-4T Permutation #3: de novo designed beta-trefoil architecture with symmetric primary structure 2010-10-11 2011-10-12 Blaber, M.,Lee, J. Permutations study of de novo designed symmetric beta-trefoil architecture To be Published 0 0 0 0 3QMK 21930949 Crystal structure of the E2 domain of APLP1 in complex with heparin hexasaccharide 2011-02-04 2011-10-12 Xue, Y.,Lee, S.,Ha, Y. Crystal structure of amyloid precursor-like protein 1 and heparin complex suggests a dual role of heparin in E2 dimerization. Proc.Natl.Acad.Sci.USA 2011 108 16229 16234 3RBX MthK RCK domain D184N mutant, Ca2+-bound 2011-03-30 2011-10-12 Pau, V.P.,Smith, F.J.,Taylor, A.B.,Samakai, E.,Callaghan, M.M.,Abarca-Heidemann, K.,Parfenova, L.V.,Hart, P.J.,Rothberg, B.S. Structures of multiple Ca2+-binding sites in a K+ channel RCK domain Proc.Natl.Acad.Sci.USA 2011 0 0 0 3TA5 21965539 Cobalt bound structure of an archaeal member of the LigD 3'-phosphoesterase DNA repair enzyme family 2011-08-03 2011-10-12 Das, U.,Smith, P.,Shuman, S. Structural insights to the metal specificity of an archaeal member of the LigD 3'-phosphoesterase DNA repair enzyme family. Nucleic Acids Res. 2012 40 828 836 3TA7 21965539 Zinc bound structure of an archaeal member of the LigD 3'-phosphoesterase DNA repair enzyme family 2011-08-03 2011-10-12 Das, U.,Smith, P.,Shuman, S. Structural insights to the metal specificity of an archaeal member of the LigD 3'-phosphoesterase DNA repair enzyme family. Nucleic Acids Res. 2012 40 828 836 3TXV Crystal structure of a probable tagatose 6 phosphate kinase from Sinorhizobium meliloti 1021 2011-09-23 2011-10-12 Agarwal, R.,Almo, S.C.,Swaminathan, S. Crystal structure of a probable tagatose 6 phosphate kinase from Sinorhizobium meliloti 1021 To be Published 0 0 0 0 3S71 22011572 The origin of the hydrophobic effect in the molecular recognition of arylsulfonamides by carbonic anhydrase 2011-05-26 2011-10-19 Snyder, P.W.,Mecinovic, J.,Moustakas, D.T.,Thomas, S.W.,Harder, M.,Mack, E.T.,Lockett, M.R.,Heroux, A.,Sherman, W.,Whitesides, G.M. Mechanism of the hydrophobic effect in the biomolecular recognition of arylsulfonamides by carbonic anhydrase. Proc.Natl.Acad.Sci.USA 2011 108 17889 17894 3S72 22011572 The origin of the hydrophobic effect in the molecular recognition of arylsulfonamides by carbonic anhydrase 2011-05-26 2011-10-19 Snyder, P.W.,Mecinovic, J.,Moustakas, D.T.,Thomas, S.W.,Harder, M.,Mack, E.T.,Lockett, M.R.,Heroux, A.,Sherman, W.,Whitesides, G.M. Mechanism of the hydrophobic effect in the biomolecular recognition of arylsulfonamides by carbonic anhydrase. Proc.Natl.Acad.Sci.USA 2011 108 17889 17894 3S74 22011572 The origin of the hydrophobic effect in the molecular recognition of arylsulfonamides by carbonic anhydrase 2011-05-26 2011-10-19 Snyder, P.W.,Mecinovic, J.,Moustakas, D.T.,Thomas, S.W.,Harder, M.,Mack, E.T.,Lockett, M.R.,Heroux, A.,Sherman, W.,Whitesides, G.M. Mechanism of the hydrophobic effect in the biomolecular recognition of arylsulfonamides by carbonic anhydrase. Proc.Natl.Acad.Sci.USA 2011 108 17889 17894 3S75 22011572 The origin of the hydrophobic effect in the molecular recognition of arylsulfonamides by carbonic anhydrase 2011-05-26 2011-10-19 Snyder, P.W.,Mecinovic, J.,Moustakas, D.T.,Thomas, S.W.,Harder, M.,Mack, E.T.,Lockett, M.R.,Heroux, A.,Sherman, W.,Whitesides, G.M. Mechanism of the hydrophobic effect in the biomolecular recognition of arylsulfonamides by carbonic anhydrase. Proc.Natl.Acad.Sci.USA 2011 108 17889 17894 3S76 22011572 The origin of the hydrophobic effect in the molecular recognition of arylsulfonamides by carbonic anhydrase 2011-05-26 2011-10-19 Snyder, P.W.,Mecinovic, J.,Moustakas, D.T.,Thomas, S.W.,Harder, M.,Mack, E.T.,Lockett, M.R.,Heroux, A.,Sherman, W.,Whitesides, G.M. Mechanism of the hydrophobic effect in the biomolecular recognition of arylsulfonamides by carbonic anhydrase. Proc.Natl.Acad.Sci.USA 2011 108 17889 17894 3S77 22011572 The origin of the hydrophobic effect in the molecular recognition of arylsulfonamides by carbonic anhydrase 2011-05-26 2011-10-19 Snyder, P.W.,Mecinovic, J.,Moustakas, D.T.,Thomas, S.W.,Harder, M.,Mack, E.T.,Lockett, M.R.,Heroux, A.,Sherman, W.,Whitesides, G.M. Mechanism of the hydrophobic effect in the biomolecular recognition of arylsulfonamides by carbonic anhydrase. Proc.Natl.Acad.Sci.USA 2011 108 17889 17894 3S78 22011572 The origin of the hydrophobic effect in the molecular recognition of arylsulfonamides by carbonic anhydrase 2011-05-26 2011-10-19 Snyder, P.W.,Mecinovic, J.,Moustakas, D.T.,Thomas, S.W.,Harder, M.,Mack, E.T.,Lockett, M.R.,Heroux, A.,Sherman, W.,Whitesides, G.M. Mechanism of the hydrophobic effect in the biomolecular recognition of arylsulfonamides by carbonic anhydrase. Proc.Natl.Acad.Sci.USA 2011 108 17889 17894 3S5N 21998747 Crystal Structure of Human 4-hydroxy-2-oxoglutarate Aldolase 2011-05-23 2011-10-26 Riedel, T.J.,Johnson, L.C.,Knight, J.,Hantgan, R.R.,Holmes, R.P.,Lowther, W.T. Structural and Biochemical Studies of Human 4-hydroxy-2-oxoglutarate Aldolase: Implications for Hydroxyproline Metabolism in Primary Hyperoxaluria. Plos One 2011 6 0 0 3TED Crystal structure of the Chd1 DNA-binding domain in complex with a DNA duplex 2011-08-12 2011-11-02 Sharma, A.,Jenkins, K.R.,Heroux, A.,Bowman, G.D. DNA-binding domain of Chd1 in complex with a DNA duplex J.Biol.Chem. 2011 0 0 0 3TO6 22020126 Crystal structure of yeast Esa1 HAT domain complexed with H4K16CoA bisubstrate inhibitor 2011-09-04 2011-11-09 Yuan, H.,Rossetto, D.,Mellert, H.,Dang, W.,Srinivasan, M.,Johnson, J.,Hodawadekar, S.,Ding, E.C.,Speicher, K.,Abshiru, N.,Perry, R.,Wu, J.,Yang, C.,Zheng, Y.G.,Speicher, D.W.,Thibault, P.,Verreault, A.,Johnson, F.B.,Berger, S.L.,Sternglanz, R.,McMahon, S.B.,Cote, J.,Marmorstein, R. MYST protein acetyltransferase activity requires active site lysine autoacetylation. Embo J. 2011 31 58 70 3U9I The crystal structure of Mandelate racemase/muconate lactonizing enzyme from Roseiflexus sp. 2011-10-19 2011-11-09 Zhang, Z.,Almo, S.C.,Swaminathan, S. The crystal structure of Mandelate racemase/muconate lactonizing enzyme from Roseiflexus sp. TO BE PUBLISHED 0 0 0 0 3PMF 22496593 Crystal structure of Staphylococcal nuclease variant Delta+PHS V23A at cryogenic temperature 2010-11-16 2011-11-16 Roche, J.,Caro, J.A.,Norberto, D.R.,Barthe, P.,Roumestand, C.,Schlessman, J.L.,Garcia, A.E.,Garcia-Moreno E, B.,Royer, C.A. Cavities determine the pressure unfolding of proteins. Proc.Natl.Acad.Sci.USA 2012 109 6945 6950 3TAX 22082911 A Neutral Diphosphate Mimic Crosslinks the Active Site of Human O-GlcNAc Transferase 2011-08-04 2011-11-16 Jiang, J.,Lazarus, M.B.,Pasquina, L.,Sliz, P.,Walker, S. A neutral diphosphate mimic crosslinks the active site of human O-GlcNAc transferase. Nat.Chem.Biol. 2011 8 72 77 3TRZ 22078496 Mouse Lin28A in complex with let-7d microRNA pre-element 2011-09-11 2011-11-16 Nam, Y.,Chen, C.,Gregory, R.I.,Chou, J.J.,Sliz, P. Molecular Basis for Interaction of let-7 MicroRNAs with Lin28. Cell(Cambridge,Mass.) 2011 147 1080 1091 3TS0 22078496 Mouse Lin28A in complex with let-7f-1 microRNA pre-element 2011-09-11 2011-11-16 Nam, Y.,Chen, C.,Gregory, R.I.,Chou, J.J.,Sliz, P. Molecular Basis for Interaction of let-7 MicroRNAs with Lin28. Cell(Cambridge,Mass.) 2011 147 1080 1091 3TW8 22065758 GEF domain of DENND 1B in complex with Rab GTPase Rab35 2011-09-21 2011-11-16 Wu, X.,Bradley, M.J.,Cai, Y.,Kummel, D.,De La Cruz, E.M.,Barr, F.A.,Reinisch, K.M. Insights regarding guanine nucleotide exchange from the structure of a DENN-domain protein complexed with its Rab GTPase substrate. Proc.Natl.Acad.Sci.USA 2011 108 18672 18677 3UMA Crystal structure of a hypothetical peroxiredoxin protein frm Sinorhizobium meliloti 2011-11-12 2011-11-23 Eswaramoorthy, S.,Almo, S.C.,Swaminathan, S. Crystal structure of a hypothetical peroxiredoxin protein from Sinorhizobium meliloti To be Published 0 0 0 0 3NAO 20958065 A DNA Crystal Designed to Contain Two Molecules per Asymmetric Unit Cell 2010-06-02 2011-11-30 Wang, T.,Sha, R.,Birktoft, J.,Zheng, J.,Mao, C.,Seeman, N.C. A DNA crystal designed to contain two molecules per asymmetric unit. J.Am.Chem.Soc. 2010 132 15471 15473 3TJ3 22130666 Structure of importin a5 bound to the N-terminus of Nup50 2011-08-23 2011-11-30 Pumroy, R.A.,Nardozzi, J.D.,Hart, D.J.,Root, M.J.,Cingolani, G. Nucleoporin Nup50 stabilizes closed conformation of armadillo repeat 10 in importin alpha 5. J.Biol.Chem. 2012 287 2022 2031 3UN1 Crystal structure of an oxidoreductase from Sinorhizobium meliloti 1021 2011-11-15 2011-11-30 Agarwal, R.,Almo, S.C.,Swaminathan, S. Crystal structure of an oxidoreductase from Sinorhizobium meliloti 1021 To be Published 0 0 0 0 3UOE The crystal structure of dehydrogenase from Sinorhizobium meliloti 2011-11-16 2011-11-30 Zhang, Z.,Almo, S.C.,Swaminathan, S. The crystal structure of dehydrogenase from Sinorhizobium meliloti To be Published 0 0 0 0 3QBZ 22130670 Crystal structure of the Rad53-recognition domain of Saccharomyces cerevisiae Dbf4 2011-01-14 2011-12-07 Matthews, L.A.,Jones, D.R.,Prasad, A.A.,Duncker, B.P.,Guarne, A. Saccharomyces cerevisiae Dbf4 has unique fold necessary for interaction with Rad53 kinase. J.Biol.Chem. 2012 287 2378 2387 3RDT 22101158 Crystal Structure of 809.B5 TCR complexed with MHC Class II I-Ab/3k peptide 2011-04-01 2011-12-07 Stadinski, B.D.,Trenh, P.,Smith, R.L.,Bautista, B.,Huseby, P.G.,Li, G.,Stern, L.J.,Huseby, E.S. A role for differential variable gene pairing in creating T cell receptors specific for unique major histocompatibility ligands. Immunity 2011 35 694 704 3RWR Crystal structure of the human XRCC4-XLF complex 2011-05-09 2011-12-07 Andres, N.S.,Wyman, C.,Modesti, M.,Junop, M.S. Structure of human XLF-XRCC4: assembly of a functional DNA repair complex To be Published 0 0 0 0 3UP8 Crystal structure of a putative 2,5-diketo-D-gluconic acid reductase B 2011-11-17 2011-12-14 Eswaramoorthy, S.,Almo, S.C.,Swaminathan, S. Crystal structure of a putative 2,5-diketo-D-gluconic acid reductase B To be Published 0 0 0 0 3QLH 21568335 HIV-1 Reverse Transcriptase in Complex with Manicol at the RNase H Active Site and TMC278 (Rilpivirine) at the NNRTI Binding Pocket 2011-02-02 2011-12-21 Chung, S.,Himmel, D.M.,Jiang, J.K.,Wojtak, K.,Bauman, J.D.,Rausch, J.W.,Wilson, J.A.,Beutler, J.A.,Thomas, C.J.,Arnold, E.,Le Grice, S.F. Synthesis, activity, and structural analysis of novel alpha-hydroxytropolone inhibitors of human immunodeficiency virus reverse transcriptase-associated ribonuclease H. J.Med.Chem. 2011 54 4462 4473 3S73 22011572 The origin of the hydrophobic effect in the molecular recognition of arylsulfonamides by carbonic anhydrase 2011-05-26 2011-12-21 Snyder, P.W.,Mecinovic, J.,Moustakas, D.T.,Thomas, S.W.,Harder, M.,Mack, E.T.,Lockett, M.R.,Heroux, A.,Sherman, W.,Whitesides, G.M. Mechanism of the hydrophobic effect in the biomolecular recognition of arylsulfonamides by carbonic anhydrase. Proc.Natl.Acad.Sci.USA 2011 108 17889 17894 3TUT 22167800 Crystal structure of RtcA.ATP binary complex 2011-09-18 2011-12-28 Chakravarty, A.K.,Smith, P.,Shuman, S. Structures of RNA 3'-phosphate cyclase bound to ATP reveal the mechanism of nucleotidyl transfer and metal-assisted catalysis. Proc.Natl.Acad.Sci.USA 2011 108 21034 21039 3TUX 22167800 Crystal structure of RtcA.ATP.Mn ternary complex 2011-09-19 2011-12-28 Chakravarty, A.K.,Smith, P.,Shuman, S. Structures of RNA 3'-phosphate cyclase bound to ATP reveal the mechanism of nucleotidyl transfer and metal-assisted catalysis. Proc.Natl.Acad.Sci.USA 2011 108 21034 21039 3TV1 22167800 Crystal structure of RtcA.AMP product complex 2011-09-19 2011-12-28 Chakravarty, A.K.,Smith, P.,Shuman, S. Structures of RNA 3'-phosphate cyclase bound to ATP reveal the mechanism of nucleotidyl transfer and metal-assisted catalysis. Proc.Natl.Acad.Sci.USA 2011 108 21034 21039 3TW3 22167800 Crystal structure of RtcA.ATP.Co ternary complex 2011-09-21 2011-12-28 Chakravarty, A.K.,Smith, P.,Shuman, S. Structures of RNA 3'-phosphate cyclase bound to ATP reveal the mechanism of nucleotidyl transfer and metal-assisted catalysis. Proc.Natl.Acad.Sci.USA 2011 108 21034 21039 3UXY The crystal structure of short chain dehydrogenase from Rhodobacter sphaeroides 2011-12-05 2011-12-28 Zhang, Z.,Almo, S.C.,Swaminathan, S. The crystal structure of short chain dehydrogenase from Rhodobacter sphaeroides To be Published 0 0 0 0 3V2H The crystal structure of D-beta-hydroxybutyrate dehydrogenase from Sinorhizobium meliloti 2011-12-12 2011-12-28 Zhang, Z.,Almo, S.C.,Swaminathan, S. The crystal structure of D-beta-hydroxybutyrate dehydrogenase from Sinorhizobium meliloti To be Published 0 0 0 0 3V4C Crystal structure of a semialdehyde dehydrogenase from Sinorhizobium meliloti 1021 2011-12-14 2011-12-28 Agarwal, R.,Almo, S.C.,Swaminathan, S. Crystal structure of a semialdehyde dehydrogenase from Sinorhizobium meliloti 1021 To be Published 0 0 0 0 3UCU 22148472 The c-di-GMP-I riboswitch bound to pGpG 2011-10-27 2012-01-04 Smith, K.D.,Lipchock, S.V.,Strobel, S.A. Structural and biochemical characterization of linear dinucleotide analogues bound to the c-di-GMP-I aptamer. Biochemistry 2012 51 425 432 3UCZ 22148472 The c-di-GMP-I riboswitch bound to GpG 2011-10-27 2012-01-04 Smith, K.D.,Lipchock, S.V.,Strobel, S.A. Structural and biochemical characterization of linear dinucleotide analogues bound to the c-di-GMP-I aptamer. Biochemistry 2012 51 425 432 3UD3 22148472 The C92U mutant c-di-GMP-I riboswitch bound to pGpA 2011-10-27 2012-01-04 Smith, K.D.,Lipchock, S.V.,Strobel, S.A. Structural and biochemical characterization of linear dinucleotide analogues bound to the c-di-GMP-I aptamer. Biochemistry 2012 51 425 432 3UD4 22148472 The C92U mutant c-di-GMP-I riboswitch bound to GpA 2011-10-27 2012-01-04 Smith, K.D.,Lipchock, S.V.,Strobel, S.A. Structural and biochemical characterization of linear dinucleotide analogues bound to the c-di-GMP-I aptamer. Biochemistry 2012 51 425 432 3V2G Crystal structure of a dehydrogenase/reductase from Sinorhizobium meliloti 1021 2011-12-12 2012-01-04 Agarwal, R.,Almo, S.C.,Swaminathan, S. Crystal structure of a dehydrogenase/reductase from Sinorhizobium meliloti 1021 To be Published 0 0 0 0 3V5N The crystal structure of oxidoreductase from Sinorhizobium meliloti 2011-12-16 2012-01-04 Zhang, Z.,Almo, S.C.,Swaminathan, S. The crystal structure of oxidoreductase from Sinorhizobium meliloti To be Published 0 0 0 0 3Q7W 23341608 Crystal structure of Symfoil-4P/PV1: de novo designed beta-trefoil architecture with symmetric primary structure, primitive version 1 2011-01-05 2012-01-11 Longo, L.M.,Lee, J.,Blaber, M. Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein. Proc.Natl.Acad.Sci.USA 2013 110 2135 2139 3Q7X 23341608 Crystal structure of Symfoil-4P/PV1: de novo designed beta-trefoil architecture with symmetric primary structure, primitive version 1 2011-01-05 2012-01-11 Longo, L.M.,Lee, J.,Blaber, M. Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein. Proc.Natl.Acad.Sci.USA 2013 110 2135 2139 3Q7Y 23341608 Crystal structure of K15R/E18D/Y22W/H41G/F44W/E51D/E53P/K57R/E60D/Y64W/H82G/F85W/E90D/E94P/K98R/E101D/Y108W/H129G/F132W/E137D Symfoil-4P: de novo designed beta-trefoil architecture with symmetric primary structure 2011-01-05 2012-01-11 Longo, L.M.,Lee, J.,Blaber, M. Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein. Proc.Natl.Acad.Sci.USA 2013 110 2135 2139 3Q9D Crystal Structure of Cpn0803 from C. pneumoniae. 2011-01-07 2012-01-11 Stone, C.B.,Sugiman-Marangos, S.N.,Junop, M.S.,Mahony, J.B. Crystal Structure of Cpn0803 from C. pneumoniae. To be Published 0 0 0 0 3SAR 22219368 MUTM Slanted complex 1 2011-06-03 2012-01-11 Qi, Y.,Nam, K.,Spong, M.C.,Banerjee, A.,Sung, R.J.,Zhang, M.,Karplus, M.,Verdine, G.L. Strandwise translocation of a DNA glycosylase on undamaged DNA. Proc.Natl.Acad.Sci.USA 2012 109 1086 1091 3SAU 22219368 MUTM Interrogation complex 6 2011-06-03 2012-01-11 Qi, Y.,Nam, K.,Spong, M.C.,Banerjee, A.,Sung, R.J.,Zhang, M.,Karplus, M.,Verdine, G.L. Strandwise translocation of a DNA glycosylase on undamaged DNA. Proc.Natl.Acad.Sci.USA 2012 109 1086 1091 3SAV 22219368 MUTM Slanted complex 8 2011-06-03 2012-01-11 Qi, Y.,Nam, K.,Spong, M.C.,Banerjee, A.,Sung, R.J.,Zhang, M.,Karplus, M.,Verdine, G.L. Strandwise translocation of a DNA glycosylase on undamaged DNA. Proc.Natl.Acad.Sci.USA 2012 109 1086 1091 3QB3 Crystal structure of Staphylococcal nuclease variant Delta+PHS I92KL25A at cryogenic temperature 2011-01-12 2012-01-18 Caro, J.A.,Sue, G.,Schlessman, J.L.,Heroux, A.,Garcia-Moreno E., B. Relocation of internal ionizable residues to cavities created by single alanine substitutions To be Published 0 0 0 0 3TEJ 22118682 Crystal structure of a domain fragment involved in peptide natural product biosynthesis 2011-08-15 2012-01-18 Liu, Y.,Zheng, T.,Bruner, S.D. Structural basis for phosphopantetheinyl carrier domain interactions in the terminal module of nonribosomal peptide synthetases. Chem.Biol. 2011 18 1482 1488 3U5P 22196728 Crystal structure of the complex of TRIM33 PHD-Bromo and H3(1-28)K9me3K14acK18acK23ac histone peptide 2011-10-11 2012-01-18 Xi, Q.,Wang, Z.,Zaromytidou, A.I.,Zhang, X.H.,Chow-Tsang, L.F.,Liu, J.X.,Kim, H.,Barlas, A.,Manova-Todorova, K.,Kaartinen, V.,Studer, L.,Mark, W.,Patel, D.J.,Massague, J. A poised chromatin platform for TGF-beta access to master regulators Cell(Cambridge,Mass.) 2011 147 1511 1524 3TY5 22308407 Crystal Structure of C. thermocellum PNKP Ligase domain in complex with ATP 2011-09-23 2012-01-25 Smith, P.,Wang, L.K.,Nair, P.A.,Shuman, S. The adenylyltransferase domain of bacterial Pnkp defines a unique RNA ligase family. Proc.Natl.Acad.Sci.USA 2012 109 2296 2301 3TY8 22308407 Crystal Structure of C. Thermocellum PNKP Ligase Domain Apo Form 2011-09-23 2012-01-25 Smith, P.,Wang, L.K.,Nair, P.A.,Shuman, S. The adenylyltransferase domain of bacterial Pnkp defines a unique RNA ligase family. Proc.Natl.Acad.Sci.USA 2012 109 2296 2301 3TY9 22308407 Crystal Structure of C. Thermocellum PNKP Ligase Domain AMP-Adenylate 2011-09-24 2012-01-25 Smith, P.,Wang, L.K.,Nair, P.A.,Shuman, S. The adenylyltransferase domain of bacterial Pnkp defines a unique RNA ligase family. Proc.Natl.Acad.Sci.USA 2012 109 2296 2301 3VA5 Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/V23A at cryogenic temperature 2011-12-28 2012-01-25 Caro, J.A.,Schlessman, J.L.,Garcia-Moreno, E.B. Pressure effects in proteins. To be Published 0 0 0 0 4DF7 Crystal structure of Staphylococcal nuclease variant Delta+PHS V23L/V99I at cryogenic temperature 2012-01-23 2012-02-01 Caro, J.A.,Schlessman, J.L.,Garcia-Moreno E., B. Pressure effects in proteins To be Published 0 0 0 0 4DFA Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/L36A at cryogenic temperature 2012-01-23 2012-02-01 Caro, J.A.,Schlessman, J.L.,Garcia-Moreno E., B. Pressure effects in proteins To be Published 0 0 0 0 3SY7 22272184 Improved crystal structure of Pseudomonas aeruginosa OprD 2011-07-15 2012-02-08 Eren, E.,Vijayaraghavan, J.,Liu, J.,Cheneke, B.R.,Touw, D.S.,Lepore, B.W.,Indic, M.,Movileanu, L.,van den Berg, B. Substrate Specificity within a Family of Outer Membrane Carboxylate Channels. Plos Biol. 2012 10 0 0 3SYS 22272184 Improved crystal structure of Pseudomonas aeruginosa OccK1 (OpdK) 2011-07-18 2012-02-08 Eren, E.,Vijayaraghavan, J.,Liu, J.,Cheneke, B.R.,Touw, D.S.,Lepore, B.W.,Indic, M.,Movileanu, L.,van den Berg, B. Substrate Specificity within a Family of Outer Membrane Carboxylate Channels. Plos Biol. 2012 10 0 0 3UKM 22282804 Crystal structure of the human two pore domain potassium ion channel K2P1 (TWIK-1) 2011-11-09 2012-02-08 Miller, A.N.,Long, S.B. Crystal structure of the human two-pore domain potassium channel K2P1. Science 2012 335 432 436 3V2U 22302941 Crystal structure of the yeast GAL regulon complex of the repressor, Gal80p, and the transducer, Gal3p, with galactose and ATP 2011-12-12 2012-02-08 Lavy, T.,Kumar, P.R.,He, H.,Joshua-Tor, L. The Gal3p transducer of the GAL regulon interacts with the Gal80p repressor in its ligand-induced closed conformation. Genes Dev. 2012 26 294 303 3V5R 22302941 Crystal structure of the unliganded form of Gal3p 2011-12-16 2012-02-08 Lavy, T.,Kumar, P.R.,He, H.,Joshua-Tor, L. The Gal3p transducer of the GAL regulon interacts with the Gal80p repressor in its ligand-induced closed conformation. Genes Dev. 2012 26 294 303 4DGZ Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/L125A at cryogenic temperature 2012-01-27 2012-02-08 Caro, J.A.,Schlessman, J.L.,Garcia-Moreno E., B. Pressure effects in proteins To be Published 0 0 0 0 3QOQ 22511872 Crystal Structure of the Transcription Factor AmrZ in Complex with the 18 Base Pair amrZ1 Binding Site 2011-02-10 2012-02-15 Pryor Jr., E.E.,Waligora, E.A.,Xu, B.,Dellos-Nolan, S.,Wozniak, D.J.,Hollis, T. The Transcription Factor AmrZ Utilizes Multiple DNA Binding Modes to Recognize Activator and Repressor Sequences of Pseudomonas aeruginosa Virulence Genes. Plos Pathog. 2012 8 0 0 3U9B 22294317 Structure of apo-CATI 2011-10-18 2012-02-15 Biswas, T.,Houghton, J.L.,Garneau-Tsodikova, S.,Tsodikov, O.V. The structural basis for substrate versatility of chloramphenicol acetyltransferase CAT(I). Protein Sci. 2012 21 520 530 3U9F 22294317 Structure of CATI in complex with chloramphenicol 2011-10-18 2012-02-15 Biswas, T.,Houghton, J.L.,Garneau-Tsodikova, S.,Tsodikov, O.V. The structural basis for substrate versatility of chloramphenicol acetyltransferase CAT(I). Protein Sci. 2012 21 520 530 3V46 22318720 Crystal Structure of Yeast Cdc73 C-Terminal Domain 2011-12-14 2012-02-15 Amrich, C.G.,Davis, C.P.,Rogal, W.P.,Shirra, M.K.,Heroux, A.,Gardner, R.G.,Arndt, K.M.,VanDemark, A.P. Cdc73 subunit of Paf1 complex contains C-terminal Ras-like domain that promotes association of Paf1 complex with chromatin. J.Biol.Chem. 2012 287 10863 10875 3V46 22318720 Crystal Structure of Yeast Cdc73 C-Terminal Domain 2011-12-14 2012-02-15 Amrich, C.G.,Davis, C.P.,Rogal, W.P.,Shirra, M.K.,Heroux, A.,Gardner, R.G.,Arndt, K.M.,VanDemark, A.P. Cdc73 subunit of Paf1 complex contains C-terminal Ras-like domain that promotes association of Paf1 complex with chromatin. J.Biol.Chem. 2012 287 10863 10875 3V8F 22343718 Crystal structure of crosslinked GltPh V216C-M385C mutant 2011-12-22 2012-02-15 Verdon, G.,Boudker, O. Crystal structure of an asymmetric trimer of a bacterial glutamate transporter homolog. Nat.Struct.Mol.Biol. 2012 19 355 357 4DQX Crystal structure of a short chain dehydrogenase from Rhizobium etli CFN 42 2012-02-16 2012-02-29 Agarwal, R.,Almo, S.C.,Swaminathan, S. Crystal structure of a short chain dehydrogenase from Rhizobium etli CFN 42 To be Published 0 0 0 0 4DRY The crystal structure of 3-oxoacyl-[acyl-carrier-protein] reductase from Rhizobium meliloti 2012-02-17 2012-02-29 Zhang, Z.,Almo, S.C.,Swaminathan, S. The crystal structure of 3-oxoacyl-[acyl-carrier-protein] reductase from Rhizobium meliloti To be Published 0 0 0 0 3QZ0 22371503 Structure of Treponema denticola Factor H Binding protein (FhbB), selenomethionine derivative 2011-03-04 2012-03-07 Miller, D.P.,Bell, J.K.,McDowell, J.V.,Conrad, D.H.,Burgner, J.W.,Heroux, A.,Marconi, R.T. Structure of factor H-binding protein B (FhbB) of the periopathogen, Treponema denticola: insights into progression of periodontal disease. J.Biol.Chem. 2012 287 12715 12722 3SGY 22347365 Staphylococcus aureus Dihydrofolate Reductase complexed with NADPH and 6-ETHYL-5-[(3S)-3-[3-METHOXY-5-(PYRIDIN-4-YL)PHENYL]BUT-1-YN-1-YL]PYRIMIDINE-2,4-DIAMINE (UCP1006) 2011-06-15 2012-03-07 Viswanathan, K.,Frey, K.M.,Scocchera, E.W.,Martin, B.D.,Swain Iii, P.W.,Alverson, J.B.,Priestley, N.D.,Anderson, A.C.,Wright, D.L. Toward New Therapeutics for Skin and Soft Tissue Infections: Propargyl-Linked Antifolates Are Potent Inhibitors of MRSA and Streptococcus pyogenes. Plos One 2012 7 0 0 3SH2 22347365 Staphylococcus aureus Dihydrofolate Reductase complexed with NADPH and 6-ethyl-5-(3-(4-methoxybiphenyl-3-yl)prop-1-ynyl)pyrimidine-2,4-diamine (UCP120J) 2011-06-15 2012-03-07 Viswanathan, K.,Frey, K.M.,Scocchera, E.W.,Martin, B.D.,Swain Iii, P.W.,Alverson, J.B.,Priestley, N.D.,Anderson, A.C.,Wright, D.L. Toward New Therapeutics for Skin and Soft Tissue Infections: Propargyl-Linked Antifolates Are Potent Inhibitors of MRSA and Streptococcus pyogenes. Plos One 2012 7 0 0 3TDO 22407320 Crystal structure of HSC at pH 9.0 2011-08-11 2012-03-07 Czyzewski, B.K.,Wang, D.N. Identification and characterization of a bacterial hydrosulphide ion channel. Nature 2012 483 494 497 3TDP 22407320 Crystal structure of HSC at pH 4.5 2011-08-11 2012-03-07 Czyzewski, B.K.,Wang, D.N. Identification and characterization of a bacterial hydrosulphide ion channel. Nature 2012 483 494 497 3TDR 22407320 Crystal structure of HSC at pH 7.5 2011-08-11 2012-03-07 Czyzewski, B.K.,Wang, D.N. Identification and characterization of a bacterial hydrosulphide ion channel. Nature 2012 483 494 497 3TDS 22407320 Crystal structure of HSC F194I 2011-08-11 2012-03-07 Czyzewski, B.K.,Wang, D.N. Identification and characterization of a bacterial hydrosulphide ion channel. Nature 2012 483 494 497 3TDX 22407320 Crystal structure of HSC L82V 2011-08-11 2012-03-07 Czyzewski, B.K.,Wang, D.N. Identification and characterization of a bacterial hydrosulphide ion channel. Nature 2012 483 494 497 3TE0 22407320 Crystal structure of HSC K148E 2011-08-11 2012-03-07 Czyzewski, B.K.,Wang, D.N. Identification and characterization of a bacterial hydrosulphide ion channel. Nature 2012 483 494 497 3TE1 22407320 Crystal structure of HSC T84A 2011-08-11 2012-03-07 Czyzewski, B.K.,Wang, D.N. Identification and characterization of a bacterial hydrosulphide ion channel. Nature 2012 483 494 497 3TE2 22407320 Crystal structure of HSC K16S 2011-08-11 2012-03-07 Czyzewski, B.K.,Wang, D.N. Identification and characterization of a bacterial hydrosulphide ion channel. Nature 2012 483 494 497 4DU9 Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/V74A at cryogenic temperature 2012-02-21 2012-03-07 Caro, J.A.,Schlessman, J.L.,Garcia-Moreno E., B. Pressure effects in proteins To be Published 0 0 0 0 4DVJ Crystal structure of a putative zinc-dependent alcohol dehydrogenase protein from Rhizobium etli CFN 42 2012-02-23 2012-03-07 Agarwal, R.,Almo, S.C.,Swaminathan, S. Crystal structure of a putative zinc-dependent alcohol dehydrogenase protein from Rhizobium etli CFN 42 To be Published 0 0 0 0 3R15 Structure Treponema Denticola Factor H Binding Protein 2011-03-09 2012-03-14 Miller, D.P.,McDowell, J.V.,Burgner, J.,Heroux, A.,Bell, J.K.,Marconi, R.T. Structure Treponema Denticola Factor H Binding Protein To be Published 0 0 0 0 3U5V 22389683 Crystal structure of Max-E47 2011-10-11 2012-03-21 Ahmadpour, F.,Ghirlando, R.,De Jong, A.T.,Gloyd, M.,Shin, J.A.,Guarne, A. Crystal structure of the minimalist max-e47 protein chimera. Plos One 2012 7 0 0 4E1J Crystal structure of glycerol kinase in complex with glycerol from Sinorhizobium meliloti 1021 2012-03-06 2012-03-21 Agarwal, R.,Almo, S.C.,Swaminathan, S. Crystal structure of glycerol kinase in complex with glycerol from Sinorhizobium meliloti 1021 To be Published 0 0 0 0 4E21 The crystal structure of 6-phosphogluconate dehydrogenase from Geobacter metallireducens 2012-03-07 2012-03-21 Zhang, Z.,Chamala, S.,Evans, B.,Foti, R.,Gizzi, A.,Hillerich, B.,Kar, A.,Lafleur, J.,Seidel, R.,Villigas, G.,Zencheck, W.,Almo, S.C.,Swaminathan, S. The crystal structure of 6-phosphogluconate dehydrogenase from Geobacter metallireducens To be Published 0 0 0 0 4DBS 22507964 Crystal structure of human 17beta-hydroxysteroid dehydrogenase type 5 (AKR1C3) in complex with NADP+ and 3'-[(4-nitronaphthalen-1-yl)amino]benzoic acid 2012-01-16 2012-03-28 Chen, M.,Adeniji, A.O.,Twenter, B.M.,Winkler, J.D.,Christianson, D.W.,Penning, T.M. Crystal structures of AKR1C3 containing an N-(aryl)amino-benzoate inhibitor and a bifunctional AKR1C3 inhibitor and androgen receptor antagonist. Therapeutic leads for castrate resistant prostate cancer. Bioorg.Med.Chem.Lett. 2012 22 3492 3497 4EQN Crystal structure of Staphylococcal nuclease variant Delta+PHS V23E/I72K at cryogenic temperature 2012-04-19 2012-05-02 Robinson, A.C.,Schlessman, J.L.,Heroux, A.,Garcia-Moreno E., B. Crystal structure of Staphylococcal nuclease variant Delta+PHS V23E/I72K at cryogenic temperature To be Published 0 0 0 0 4EQO Crystal structure of Staphylococcal nuclease variant Delta+PHS V99D at cryogenic temperature 2012-04-19 2012-05-02 Robinson, A.C.,Schlessman, J.L.,Heroux, A.,Garcia-Moreno E., B. Crystal structure of Staphylococcal nuclease variant Delta+PHS V99D at cryogenic temperature To be Published 0 0 0 0 4EQP Crystal structure of Staphylococcal nuclease variant Delta+PHS I72D at cryogenic temperature 2012-04-19 2012-05-02 Robinson, A.C.,Schlessman, J.L.,Heroux, A.,Garcia-Moreno E., B. Crystal structure of Staphylococcal nuclease variant Delta+PHS I72D at cryogenic temperature To be Published 0 0 0 0 3RO9 23375226 Candida glabrata dihydrofolate reductase complexed with NADPH and 6-ethyl-5-[(3R)-3-[3-methoxy-5-(pyridin-4-yl)phenyl]but-1-yn-1-yl]pyrimidine-2,4-diamine (UCP1006) 2011-04-25 2012-05-09 Paulsen, J.L.,Viswanathan, K.,Wright, D.L.,Anderson, A.C. Structural analysis of the active sites of dihydrofolate reductase from two species of Candida uncovers ligand-induced conformational changes shared among species. Bioorg.Med.Chem.Lett. 2013 23 1279 1284 3ROA 23375226 Candida glabrata dihydrofolate reductase complexed with NADPH and 6-ethyl-5-[(3R)-3-[3-methoxy-5-(morpholin-4-yl)phenyl]but-1-yn-1-yl]pyrimidine-2,4-diamine (UCP1004) 2011-04-25 2012-05-09 Paulsen, J.L.,Viswanathan, K.,Wright, D.L.,Anderson, A.C. Structural analysis of the active sites of dihydrofolate reductase from two species of Candida uncovers ligand-induced conformational changes shared among species. Bioorg.Med.Chem.Lett. 2013 23 1279 1284 4EEY 22562137 Crystal structure of human DNA polymerase eta in ternary complex with a cisplatin DNA adduct 2012-03-28 2012-05-09 Ummat, A.,Rechkoblit, O.,Jain, R.,Roy Choudhury, J.,Johnson, R.E.,Silverstein, T.D.,Buku, A.,Lone, S.,Prakash, L.,Prakash, S.,Aggarwal, A.K. Structural basis for cisplatin DNA damage tolerance by human polymerase {eta} during cancer chemotherapy. Nat.Struct.Mol.Biol. 2012 19 628 632 3UBI 22434713 The Absence of Tertiary Interactions in a Self-Assembled DNA Crystal Structure 2011-10-24 2012-05-16 Nguyen, N.,Birktoft, J.J.,Sha, R.,Wang, T.,Zheng, J.,Constantinou, P.E.,Ginell, S.L.,Chen, Y.,Mao, C.,Seeman, N.C. The absence of tertiary interactions in a self-assembled DNA crystal structure. J.Mol.Recognit. 2012 25 234 237 4EW6 Crystal structure of D-galactose-1-dehydrogenase protein from Rhizobium etli 2012-04-26 2012-05-16 Eswaramoorthy, S.,Chamala, S.,Evans, B.,Foti, R.,Gizzi, A.,Hillerich, B.,Kar, A.,Lafleur, J.,Seidel, R.,Villigas, G.,Zencheck, W.,Almo, S.C.,Swaminathan, S. Crystal structure of D-galactose-1-dehydrogenase protein from Rhizobium etli TO BE PUBLISHED 0 0 0 0 4EVO Crystal structure of Staphylococcal nuclease variant NVIAGA/E122G at cryogenic temperature 2012-04-26 2012-05-23 Doctrow, B.M.,Schlessman, J.L.,Garcia-Moreno E., B.,Baran, K.L.,Chimenti, M.S.,Herbst, K.J.,Fitch, C.A.,Majumdar, A. Local flexibility as a determinant of pKa values of surface ionizable groups in proteins To be Published 0 0 0 0 4F3S Crystal structure of periplasmic D-alanine ABC transporter from Salmonella enterica 2012-05-09 2012-05-23 Agarwal, R.,Almo, S.C.,Swaminathan, S. Crystal structure of periplasmic D-alanine ABC transporter from Salmonella enterica To be Published 0 0 0 0 4EWR 22665483 X-ray structure of WDR5-SETd1a Win motif peptide binary complex 2012-04-27 2012-05-30 Dharmarajan, V.,Lee, J.H.,Patel, A.,Skalnik, D.G.,Cosgrove, M.S. Structural basis for WDR5 interaction (Win) motif recognition in human SET1 family histone methyltransferases. J.Biol.Chem. 2012 287 27275 27289 3THF 22493320 Crystal structure of the SD2 domain from Drosophila Shroom 2011-08-18 2012-06-06 Mohan, S.,Rizaldy, R.,Das, D.,Bauer, R.J.,Heroux, A.,Trakselis, M.A.,Hildebrand, J.D.,VanDemark, A.P. Structure of Shroom domain 2 reveals a three-segmented coiled-coil required for dimerization, Rock binding, and apical constriction. Mol Biol Cell 2012 23 2131 2142 3THF 22493320 Crystal structure of the SD2 domain from Drosophila Shroom 2011-08-18 2012-06-06 Mohan, S.,Rizaldy, R.,Das, D.,Bauer, R.J.,Heroux, A.,Trakselis, M.A.,Hildebrand, J.D.,VanDemark, A.P. Structure of Shroom domain 2 reveals a three-segmented coiled-coil required for dimerization, Rock binding, and apical constriction. Mol Biol Cell 2012 23 2131 2142 3VP1 22538822 Crystal structure of human glutaminase in complex with L-glutamate and BPTES 2012-02-23 2012-06-13 Thangavelu, K.,Pan, C.Q.,Karlberg, T.,Balaji, G.,Uttamchandani, M.,Suresh, V.,Schuler, H.,Low, B.C.,Sivaraman, J. Structural basis for the allosteric inhibitory mechanism of human kidney-type glutaminase (KGA) and its regulation by Raf-Mek-Erk signaling in cancer cell metabolism. Proc.Natl.Acad.Sci.USA 2012 109 7705 7710 4DOX 22659319 Crystal Structure of Papaya mosaic virus capsid protein 2012-02-11 2012-06-13 Yang, S.,Wang, T.,Bohon, J.,Gagne, N.,Bolduc, M.,Leclerc, D.,Li, H. Crystal structure of the coat protein of the flexible filamentous papaya mosaic virus. 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Proc.Natl.Acad.Sci.USA 2013 110 3345 3350 4IQZ The crystal structure of a large insert in RNA polymerase (RpoC) subunit from E. coli 2013-01-14 2013-02-13 Bhandari, V.,Sugiman-Marangos, S.N.,Naushad, H.S.,Gupta, R.S.,Junop, M.S. The crystal structure of a large insert in RNA polymerase (RpoC) subunit from E. coli To be Published 0 0 0 0 4J3C Crystal structure of 16S ribosomal RNA methyltransferase RsmE 2013-02-05 2013-02-20 Eswaramoorthy, S.,Almo, S.C.,Swaminathan, S. Crystal structure of 16S ribosomal RNA methyltransferase RsmE TO BE PUBLISHED 0 0 0 0 4FEJ 23485418 Crystal structure of the A24U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthine 2012-05-30 2013-02-27 Stoddard, C.D.,Widmann, J.,Trausch, J.J.,Marcano-Velazquez, J.G.,Knight, R.,Batey, R.T. Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch. J.Mol.Biol. 2013 425 1596 1611 4FEL 23485418 Crystal structure of the U25A/A46G mutant of the xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthine 2012-05-30 2013-02-27 Stoddard, C.D.,Widmann, J.,Trausch, J.J.,Marcano-Velazquez, J.G.,Knight, R.,Batey, R.T. Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch. J.Mol.Biol. 2013 425 1596 1611 4FEN 23485418 Crystal structure of the A24U/U25A/A46G mutant xpt-pbuX guanine riboswitch aptamer domain in complex with hypoxanthine 2012-05-30 2013-02-27 Stoddard, C.D.,Widmann, J.,Trausch, J.J.,Marcano-Velazquez, J.G.,Knight, R.,Batey, R.T. Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch. J.Mol.Biol. 2013 425 1596 1611 4FEP 23485418 Crystal structure of the A24U/U25A/A46G/C74U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with 2,6-diaminopurine 2012-05-30 2013-02-27 Stoddard, C.D.,Widmann, J.,Trausch, J.J.,Marcano-Velazquez, J.G.,Knight, R.,Batey, R.T. Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch. J.Mol.Biol. 2013 425 1596 1611 4GPO 23435379 Oligomeic Turkey Beta1-Adrenergic G Protein-Coupled Receptor 2012-08-21 2013-02-27 Huang, J.,Chen, S.,Zhang, J.J.,Huang, X.Y. Crystal structure of oligomeric beta-1-adrenergic G protein-coupled receptors in ligand-free basal state. Nat.Struct.Mol.Biol. 2013 20 419 425 4F0Z 23468591 Crystal Structure of Calcineurin in Complex with the Calcineurin-Inhibiting Domain of the African Swine Fever Virus Protein A238L 2012-05-05 2013-03-06 Grigoriu, S.,Bond, R.,Cossio, P.,Chen, J.A.,Ly, N.,Hummer, G.,Page, R.,Cyert, M.S.,Peti, W. The molecular mechanism of substrate engagement and immunosuppressant inhibition of calcineurin. Plos Biol. 2013 11 0 0 4DT5 23486477 Crystal Structure of Rhagium inquisitor Antifreeze Protein 2012-02-20 2013-03-13 Hakim, A.,Nguyen, J.B.,Basu, K.,Zhu, D.F.,Thakral, D.,Davies, P.L.,Isaacs, F.J.,Modis, Y.,Meng, W. Crystal structure of an insect antifreeze protein and its implications for ice binding. J.Biol.Chem. 2013 288 12295 12304 4FOZ 23467408 Crystal Structure of OccD1 (OprD) Y282R/D307H 2012-06-21 2013-03-13 Eren, E.,Parkin, J.,Adelanwa, A.,Cheneke, B.,Movileanu, L.,Khalid, S.,van den Berg, B. Toward Understanding the Outer Membrane Uptake of Small Molecules by Pseudomonas aeruginosa. J.Biol.Chem. 2013 288 12042 12053 4HSI 23500487 Glycoprotein B from Herpes simplex virus type 1, A504P/R505G/Q507G/N511G mutant, low-pH 2012-10-30 2013-03-27 Vitu, E.,Sharma, S.,Stampfer, S.D.,Heldwein, E.E. Extensive Mutagenesis of the HSV-1 gB Ectodomain Reveals Remarkable Stability of Its Postfusion Form. J.Mol.Biol. 2013 425 2056 2071 4ITQ 23427309 Crystal structure of hypothetical protein SCO1480 bound to DNA 2013-01-18 2013-03-27 Swiercz, J.P.,Nanji, T.,Gloyd, M.,Guarne, A.,Elliot, M.A. A novel nucleoid-associated protein specific to the actinobacteria. Nucleic Acids Res. 2013 41 4171 4184 4HJP 23514039 SHP-1 catalytic domain WPD loop open 2012-10-13 2013-04-03 Alicea-Velazquez, N.L.,Boggon, T.J. SHP Family Protein Tyrosine Phosphatases Adopt Canonical Active-Site Conformations in the Apo and Phosphate-Bound States. Protein Pept.Lett. 2013 20 1039 1048 4J9U 23598339 Crystal Structure of the TrkH/TrkA potassium transport complex 2013-02-17 2013-04-03 Cao, Y.,Pan, Y.,Huang, H.,Jin, X.,Levin, E.J.,Kloss, B.,Zhou, M. Gating of the TrkH ion channel by its associated RCK protein TrkA. Nature 2013 496 317 322 4ILD 23569276 Crystal structure of truncated Bovine viral diarrhea virus 1 E2 envelope protein 2012-12-30 2013-04-10 Li, Y.,Wang, J.,Kanai, R.,Modis, Y. Crystal structure of glycoprotein E2 from bovine viral diarrhea virus. Proc.Natl.Acad.Sci.USA 2013 110 6805 6810 4J6O 23595150 Crystal Structure of the Phosphatase Domain of C. thermocellum (Bacterial) PnkP 2013-02-11 2013-04-10 Wang, L.K.,Smith, P.,Shuman, S. Structure and mechanism of the 2',3' phosphatase component of the bacterial Pnkp-Hen1 RNA repair system. Nucleic Acids Res. 2013 41 5864 5873 4J08 23545108 Crystal structure of hcv ns5b polymerase in complex with 2-{[(4-METHYLPHENYL)SULFONYL]AMINO}-5-PHENOXYBENZOIC ACID 2013-01-30 2013-04-17 Stammers, T.A.,Coulombe, R.,Rancourt, J.,Thavonekham, B.,Fazal, G.,Goulet, S.,Jakalian, A.,Wernic, D.,Tsantrizos, Y.,Poupart, M.A.,Bos, M.,McKercher, G.,Thauvette, L.,Kukolj, G.,Beaulieu, P.L. Discovery of a novel series of non-nucleoside thumb pocket 2 HCV NS5B polymerase inhibitors. Bioorg.Med.Chem.Lett. 2013 23 2585 2589 4J0A 23545108 Crystal structure of hcv ns5b polymerase in complex with 2-{[(4-METHYLPHENYL)SULFONYL]AMINO}-4-PHENOXYBENZOIC ACID 2013-01-30 2013-04-17 Stammers, T.A.,Coulombe, R.,Rancourt, J.,Thavonekham, B.,Fazal, G.,Goulet, S.,Jakalian, A.,Wernic, D.,Tsantrizos, Y.,Poupart, M.A.,Bos, M.,McKercher, G.,Thauvette, L.,Kukolj, G.,Beaulieu, P.L. Discovery of a novel series of non-nucleoside thumb pocket 2 HCV NS5B polymerase inhibitors. Bioorg.Med.Chem.Lett. 2013 23 2585 2589 4FHT 23396446 Crystal Structure of the PcaV transcriptional regulator from Streptomyces coelicolor in complex with its natural ligand 2012-06-06 2013-04-24 Davis, J.R.,Brown, B.L.,Page, R.,Sello, J.K. Study of PcaV from Streptomyces coelicolor yields new insights into ligand-responsive MarR family transcription factors. Nucleic Acids Res. 2013 41 3888 3900 4K2K Crystal structure of Staphylococcal nuclease variant Delta+PHS L25A/L36A/I92A at cryogenic temperature 2013-04-09 2013-04-24 Caro, J.A.,Schlessman, J.L.,Garcia-Moreno E., B. Pressure effects on proteins To be Published 0 0 0 0 4K2L Crystal structure of Staphylococcal nuclease variant Delta+PHS I92Q at cryogenic temperature 2013-04-09 2013-04-24 Caro, J.A.,Schlessman, J.L.,Garcia-Moreno E., B. Cavity hydration in proteins To be Published 0 0 0 0 4K5V Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/L36A/V99T at cryogenic temperature 2013-04-15 2013-04-24 Caro, J.A.,Schlessman, J.L.,Garcia-Moreno E., B. Cavities in proteins To be Published 0 0 0 0 4K5W Crystal structure of Staphylococcal nuclease variant V23M/L25F/T62F at cryogenic temperature 2013-04-15 2013-04-24 Caro, J.A.,Schlessman, J.L.,Garcia-Moreno E., B. Pressure effects in proteins To be Published 0 0 0 0 4K5X Crystal structure of Staphylococcal nuclease variant V23M/L36F at cryogenic temperature 2013-04-15 2013-04-24 Caro, J.A.,Schlessman, J.L.,Garcia-Moreno E., B. Pressure effects on proteins To be Published 0 0 0 0 4K6D Crystal structure of Staphylococcal nuclease variant V23M/T62F at cryogenic temperature 2013-04-15 2013-04-24 Caro, J.A.,Schlessman, J.L.,Garcia-Moreno E., B. Pressure effects on proteins To be Published 0 0 0 0 4H1D 23609444 Cocrystal structure of GlpG and DFP 2012-09-10 2013-05-01 Xue, Y.,Ha, Y. Large lateral movement of transmembrane helix s5 is not required for substrate access to the active site of rhomboid intramembrane protease. J.Biol.Chem. 2013 288 16645 16654 4KD3 Crystal structure of Staphylococcal nuclease variant Delta+PHS L25A/V66A/I92A at cryogenic temperature 2013-04-24 2013-05-08 Caro, J.A.,Schlessman, J.L.,Garcia-Moreno E., B. Pressure effects in proteins To be Published 0 0 0 0 4KD4 Crystal structure of Staphylococcal nuclease variant V23L/L25V/V66I/I72V at cryogenic temperature 2013-04-24 2013-05-08 Caro, J.A.,Schlessman, J.L.,Garcia-Moreno E., B. Pressure effects in proteins To be Published 0 0 0 0 4JKR 23623685 Crystal Structure of E. coli RNA Polymerase in complex with ppGpp 2013-03-11 2013-05-15 Zuo, Y.,Wang, Y.,Steitz, T.A. The mechanism of E. coli RNA polymerase regulation by ppGpp is suggested by the structure of their complex. Mol.Cell 2013 50 430 436 4KHV Crystal structure of Staphylococcal nuclease variant Delta+PHS V23S at cryogenic temperature 2013-05-01 2013-05-15 Sorenson, J.L.,Schlessman, J.L.,Garcia-Moreno E., B. 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Structure 2013 21 1361 1373 4JOI 23826127 Crystal structure of the human telomeric Stn1-Ten1 complex 2013-03-18 2013-05-29 Bryan, C.,Rice, C.,Harkisheimer, M.,Schultz, D.C.,Skordalakes, E. Structure of the human telomeric stn1-ten1 capping complex. Plos One 2013 8 0 0 4JWX 23625947 GluN2A ligand-binding core in complex with propyl-NHP5G 2013-03-27 2013-05-29 Hansen, K.B.,Tajima, N.,Risgaard, R.,Perszyk, R.E.,Jorgensen, L.,Vance, K.M.,Ogden, K.K.,Clausen, R.P.,Furukawa, H.,Traynelis, S.F. Structural determinants of agonist efficacy at the glutamate binding site of N-methyl-d-aspartate receptors. Mol.Pharmacol. 2013 84 114 127 4JWY 23625947 GluN2D ligand-binding core in complex with propyl-NHP5G 2013-03-27 2013-05-29 Hansen, K.B.,Tajima, N.,Risgaard, R.,Perszyk, R.E.,Jorgensen, L.,Vance, K.M.,Ogden, K.K.,Clausen, R.P.,Furukawa, H.,Traynelis, S.F. Structural determinants of agonist efficacy at the glutamate binding site of N-methyl-d-aspartate receptors. Mol.Pharmacol. 2013 84 114 127 4G9Y 23396446 Crystal Structure of the PcaV transcriptional regulator from Streptomyces coelicolor 2012-07-24 2013-06-05 Davis, J.R.,Brown, B.L.,Page, R.,Sello, J.K. Study of PcaV from Streptomyces coelicolor yields new insights into ligand-responsive MarR family transcription factors. Nucleic Acids Res. 2013 41 3888 3900 4IZC 23704947 Crystal structure of DmdD E121A in complex with MTA-CoA 2013-01-29 2013-06-05 Tan, D.,Crabb, W.M.,Whitman, W.B.,Tong, L. Crystal Structure of DmdD, a Crotonase Superfamily Enzyme That Catalyzes the Hydration and Hydrolysis of Methylthioacryloyl-CoA. Plos One 2013 8 0 0 4JQF 23826127 Structure of the C-terminal domain of human telomeric Stn1 2013-03-20 2013-06-05 Bryan, C.,Rice, C.,Harkisheimer, M.,Schultz, D.C.,Skordalakes, E. Structure of the human telomeric stn1-ten1 capping complex. Plos One 2013 8 0 0 4JJS 23768906 Crystal structure of HCV NS5B polymerase in complex with COMPOUND 2 2013-03-08 2013-06-12 Beaulieu, P.L.,Coulombe, R.,Duan, J.,Fazal, G.,Godbout, C.,Hucke, O.,Jakalian, A.,Joly, M.A.,Lepage, O.,Llinas-Brunet, M.,Naud, J.,Poirier, M.,Rioux, N.,Thavonekham, B.,Kukolj, G.,Stammers, T.A. Structure-based design of novel HCV NS5B thumb pocket 2 allosteric inhibitors with submicromolar gt1 replicon potency: Discovery of a quinazolinone chemotype. Bioorg.Med.Chem.Lett. 2013 23 4132 4140 4KY5 Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D at pH 7 and cryogenic temperature 2013-05-28 2013-06-12 Robinson, A.C.,Schlessman, J.L.,Heroux, A.,Garcia-Moreno E., B. Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D at pH 7 and cryogenic temperature To be Published 0 0 0 0 4KYY Crystal Structure of RNA 17-mer UUCGGUUUUGAUCCGGA duplex 2013-05-29 2013-06-12 Smith, P.C.,Shuman, S. Crystal Structure of RNA 17-mer UUCGGUUUUGAUCCGGA duplex To be Published 0 0 0 0 4L2M 23999883 Crystal structure of the 2/2 hemoglobin from Synechococcus sp. PCC 7002 in the cyanomet state and with covalently attached heme 2013-06-04 2013-06-12 Wenke, B.B.,Lecomte, J.T.,Heroux, A.,Schlessman, J.L. The 2/2 hemoglobin from the cyanobacterium Synechococcus sp. PCC 7002 with covalently attached heme: Comparison of X-ray and NMR structures. Proteins 2014 82 528 534 4KRF 23746446 Structure of Human Argonaute-1 let-7 complex 2013-05-16 2013-06-19 Faehnle, C.R.,Elkayam, E.,Haase, A.D.,Hannon, G.J.,Joshua-Tor, L. The making of a slicer: activation of human argonaute-1. Cell Rep 2013 3 1901 1909 4L1R Glycoprotein B from Herpes Simplex Virus type 1, A549T Rate-of-Entry mutant, low-pH 2013-06-03 2013-06-26 0 0 0 0 4GUM 23776208 Cystal structure of locked-trimer of human MIF 2012-08-29 2013-07-03 Fan, C.,Rajasekaran, D.,Syed, M.A.,Leng, L.,Loria, J.P.,Bhandari, V.,Bucala, R.,Lolis, E.J. MIF intersubunit disulfide mutant antagonist supports activation of CD74 by endogenous MIF trimer at physiologic concentrations. Proc.Natl.Acad.Sci.USA 2013 110 10994 10999 4KED Crystal Structure of Cofilin Mutant (cof1-157p) 2013-04-25 2013-07-03 Kish-Trier, E.,Haarer, B.,Cingolani, G.,Amberg, D.C. Crystal Structure of Cofilin Mutant (cof1-157p) To be Published 0 0 0 0 4FUV Crystal Structure of Acinetobacter baumannii CarO 2012-06-28 2013-07-10 Eren, E.,Ohneswere, S.,Adelanwa, A.,van den Berg, B. Outer membrane transport of amino acids and antibiotics by an 8-stranded b-barrel protein To be Published 0 0 0 0 4KAP 23788494 The Binding of Benzoarylsulfonamide Ligands to Human Carbonic Anhydrase is Insensitive to Formal Fluorination of the Ligand 2013-04-22 2013-07-10 Lockett, M.R.,Lange, H.,Breiten, B.,Heroux, A.,Sherman, W.,Rappoport, D.,Yau, P.O.,Snyder, P.W.,Whitesides, G.M. 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Crystal Structures of OccK Subfamily Proteins To be Published 0 0 0 0 4KZX 23873042 Rabbit 40S ribosomal subunit in complex with eIF1. 2013-05-30 2013-07-24 Lomakin, I.B.,Steitz, T.A. The initiation of mammalian protein synthesis and mRNA scanning mechanism. Nature 2013 500 307 311 4L7X 23831028 Crystal structure of the DIDO PHD finger in complex with H3K4me3 2013-06-14 2013-07-24 Gatchalian, J.,Futterer, A.,Rothbart, S.B.,Tong, Q.,Rincon-Arano, H.,Sanchez de Diego, A.,Groudine, M.,Strahl, B.D.,Martinez-A, C.,van Wely, K.H.,Kutateladze, T.G. Dido3 PHD Modulates Cell Differentiation and Division. Cell Rep 2013 4 148 158 4LNV 23055931 Crystal Structure of TEP1s 2013-07-12 2013-07-24 Le, B.V.,Williams, M.,Logarajah, S.,Baxter, R.H. Molecular basis for genetic resistance of Anopheles gambiae to Plasmodium: structural analysis of TEP1 susceptible and resistant alleles. 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Cell Rep 2013 4 327 339 4LA5 23844678 Crystal structure of 2-methylisoborneol synthase from Streptomyces coelicolor A3(2) 2013-06-19 2013-07-31 Koksal, M.,Chou, W.K.,Cane, D.E.,Christianson, D.W. Unexpected reactivity of 2-fluorolinalyl diphosphate in the active site of crystalline 2-methylisoborneol synthase. Biochemistry 2013 52 5247 5255 4LA6 23844678 Crystal structure of 2-methylisoborneol synthase from Streptomyces coelicolor A3(2) in complex with Mg2+ and 2-fluoroneryl diphosphate 2013-06-19 2013-07-31 Koksal, M.,Chou, W.K.,Cane, D.E.,Christianson, D.W. Unexpected reactivity of 2-fluorolinalyl diphosphate in the active site of crystalline 2-methylisoborneol synthase. Biochemistry 2013 52 5247 5255 4AZM 24531463 Human epidermal fatty acid-binding protein (FABP5) in complex with the inhibitor BMS-309413 2012-06-26 2013-08-07 Sanson, B.,Wang, T.,Sun, J.,Wang, L.,Kaczocha, M.,Ojima, I.,Deutsch, D.,Li, H. Crystallographic Study of Fabp5 as an Intracellular Endocannabinoid Transporter. Acta Crystallogr.,Sect.D 2014 70 290 0 4AZN 24531463 Murine epidermal fatty acid-binding protein (FABP5), apo form, poly- his tag-mediated crystal packing 2012-06-26 2013-08-07 Sanson, B.,Wang, T.,Sun, J.,Wang, L.,Kaczocha, M.,Ojima, I.,Deutsch, D.,Li, H. Crystallographic Study of Fabp5 as an Intracellular Endocannabinoid Transporter. Acta Crystallogr.,Sect.D 2014 70 290 0 4AZR 24531463 Human epidermal fatty acid-binding protein (FABP5) in complex with the endocannabinoid anandamide 2012-06-26 2013-08-07 Sanson, B.,Wang, T.,Sun, J.,Wang, L.,Kaczocha, M.,Ojima, I.,Deutsch, D.,Li, H. Crystallographic Study of Fabp5 as an Intracellular Endocannabinoid Transporter. Acta Crystallogr.,Sect.D 2014 70 290 0 4KAX 23940353 Crystal structure of the Grp1 PH domain in complex with Arf6-GTP 2013-04-23 2013-08-14 Malaby, A.W.,van den Berg, B.,Lambright, D.G. 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Nat.Chem.Biol. 2015 11 847 854 4RH8 Crystal structure of the outer membrane lipopolysaccharide transport protein LptE (RlpB) from Escherichia coli in the tetragonal crystal form 2014-10-01 2015-11-11 Malojcic, G.,Kahne, D. Structural basis of lipopolysaccharide insertion into the bacterial outer membrane To be Published 0 0 0 0 4ZXS 26511020 HSV-1 nuclear egress complex 2015-05-20 2015-11-11 Bigalke, J.M.,Heldwein, E.E. Structural basis of membrane budding by the nuclear egress complex of herpesviruses. Embo J. 2015 34 2921 2936 4XF2 26323303 Tetragonal structure of Arp2/3 complex 2014-12-25 2015-11-18 Jurgenson, C.T.,Pollard, T.D. Crystals of the Arp2/3 complex in two new space groups with structural information about actin-related protein 2 and potential WASP binding sites. 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Mol.Cell 2015 58 832 844 5F9H 26733676 Crystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNA 2015-12-09 2016-01-13 Devarkar, S.C.,Wang, C.,Miller, M.T.,Ramanathan, A.,Jiang, F.,Khan, A.G.,Patel, S.S.,Marcotrigiano, J. Structural basis for m7G recognition and 2'-O-methyl discrimination in capped RNAs by the innate immune receptor RIG-I. Proc.Natl.Acad.Sci.USA 2016 113 596 601 4XE6 Staphylococcus aureus Dihydrofolate Reductase complexed with NADPH and 6-ETHYL-5-[(3R)-3-[3-METHOXY-5-(PYRIDIN-4-YL)PHENYL]BUT-1-YN-1-YL]PYRIMIDINE-2,4-DIAMINE (UCP1061) 2014-12-23 2016-01-20 Keshipeddy, S.,Reeve, S.M.,Anderson, A.C.,Wright, D.L. 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