PDB_ID PUBMED_CID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS CITATION TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 3DGD 20659897 Crystal structure of the F87M/L110M mutant of human transthyretin at pH 4.6 2008-06-13 2008-07-22 Palmieri, L.de.C.,Lima, L.M.,Freire, J.B.,Bleicher, L.,Polikarpov, I.,Almeida, F.C.,Foguel, D. Novel Zn2+-binding sites in human transthyretin: implications for amyloidogenesis and retinol-binding protein recognition. J.Biol.Chem. 2010 285 31731 31741 3DID 20659897 Crystal structure of the F87M/L110M mutant of human transthyretin at pH 4.6 soaked 2008-06-20 2008-07-22 Palmieri, L.de.C.,Lima, L.M.,Freire, J.B.,Bleicher, L.,Polikarpov, I.,Almeida, F.C.,Foguel, D. Novel Zn2+-binding sites in human transthyretin: implications for amyloidogenesis and retinol-binding protein recognition. J.Biol.Chem. 2010 285 31731 31741 3DLQ 18675809 Crystal structure of the IL-22/IL-22R1 complex 2008-06-28 2008-08-19 Bleicher, L.,de Moura, P.R.,Watanabe, L.,Colau, D.,Dumoutier, L.,Renauld, J.-C.,Polikarpov, I. Crystal structure of the IL-22/IL-22R1 complex and its implications for the IL-22 signaling mechanism Febs Lett. 2008 582 2985 2992 3BWS 18508281 Crystal structure of the leptospiral antigen Lp49 2008-01-10 2008-10-07 Giuseppe, P.O.,Neves, F.O.,Nascimento, A.L.T.O.,Guimaraes, B.G. The leptospiral antigen Lp49 is a two-domain protein with putative protein binding function J.Struct.Biol. 2008 163 53 60 3EXD 19096177 Sulfur-SAD phased HEWL Crystal 2008-10-16 2008-10-28 Guimaraes, B.G.,Sanfelici, L.,Neuenschwander, R.T.,Rodrigues, F.,Grizolli, W.C.,Raulik, M.A.,Piton, J.R.,Meyer, B.C.,Nascimento, A.S.,Polikarpov, I. The MX2 macromolecular crystallography beamline: a wiggler X-ray source at the LNLS. J.Synchrotron Radiat. 2009 16 69 75 3CNR 19646999 Crystal Structure of PilZ (XAC1133) from Xanthomonas axonopodis pv citri 2008-03-26 2009-03-31 Guzzo, C.R.,Salinas, R.K.,Andrade, M.O.,Farah, C.S. PILZ protein structure and interactions with PILB and the FIMX EAL domain: implications for control of type IV pilus biogenesis. J.Mol.Biol. 2009 393 848 866 3G9V 19285080 Crystal structure of a soluble decoy receptor IL-22BP bound to interleukin-22 2009-02-14 2009-04-14 de Moura, P.R.,Watanabe, L.,Bleicher, L.,Colau, D.,Dumoutier, L.,Lemaire, M.M.,Renauld, J.-C.,Polikarpov, I. Crystal structure of a soluble decoy receptor IL-22BP bound to interleukin-22 FEBS Lett. 2009 583 1072 1077 3H79 Crystal structure of Trypanosoma cruzi thioredoxin-like hypothetical protein Q4DV70 2009-04-24 2009-05-12 Santos, C.R.,Fessel, M.R.,Vieira, L.C.,Krieger, M.A.,Goldenberg, S.,Guimaraes, B.G.,Zanchin, N.I.T.,Barbosa, J.A.R.G. Crystal structure of Trypanosoma cruzi thioredoxin-like hypothetical protein Q4DV70 TO BE PUBLISHED 0 0 0 0 3FRL 19477185 The 2.25 A crystal structure of LipL32, the major surface antigen of Leptospira interrogans serovar Copenhageni 2009-01-08 2009-06-16 Hauk, P.,Guzzo, C.R.,Roman Ramos, H.,Ho, P.L.,Farah, C.S. Structure and calcium-binding activity of LipL32, the major surface antigen of pathogenic Leptospira sp. J.Mol.Biol. 2009 390 722 736 3DJF 20129792 Crystal Structure of Schistosoma mansoni Purine Nucleoside Phosphorylase in a complex with BCX-34 2008-06-23 2009-06-30 Castilho, M.S.,Postigo, M.P.,Pereira, H.M.,Oliva, G.,Andricopulo, A.D. Structural basis for selective inhibition of purine nucleoside phosphorylase from Schistosoma mansoni: kinetic and structural studies. Bioorg.Med.Chem. 2010 18 1421 1427 3IDS Structure of Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase from Trypanosoma cruzi in complex with the irreversible iodoacetamide inhibitor 2009-07-21 2009-08-11 Balliano, T.L.,Guido, R.V.C.,Andricopulo, A.D.,Oliva, G. Structure of Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase from Trypanosoma cruzi in complex with the irreversible iodoacetamide inhibitor To be Published 0 0 0 0 3E9R 20057051 Crystal structure of purine nucleoside phosphorylase from Schistosoma mansoni in complex with adenine 2008-08-23 2009-09-01 Pereira, H.M.,Rezende, M.M.,Castilho, M.S.,Oliva, G.,Garratt, R.C. Adenosine binding to low-molecular-weight purine nucleoside phosphorylase: the structural basis for recognition based on its complex with the enzyme from Schistosoma mansoni. Acta Crystallogr.,Sect.D 2010 66 73 79 3F8W 20057051 Crystal structure of Schistosoma mansoni purine nucleoside phosphorylase in complex with adenosine 2008-11-13 2009-11-24 Pereira, H.M.,Rezende, M.M.,Castilho, M.S.,Oliva, G.,Garratt, R.C. Adenosine binding to low-molecular-weight purine nucleoside phosphorylase: the structural basis for recognition based on its complex with the enzyme from Schistosoma mansoni. Acta Crystallogr.,Sect.D 2010 66 73 79 3HDL 19854274 Crystal Structure of Highly Glycosylated Peroxidase from Royal Palm Tree 2009-05-07 2009-11-24 Watanabe, L.,de Moura, P.R.,Bleicher, L.,Nascimento, A.S.,Zamorano, L.S.,Calvete, J.J.,Sanz, L.,Perez, A.,Bursakov, S.,Roig, M.G.,Shnyrov, V.L.,Polikarpov, I. Crystal structure and statistical coupling analysis of highly glycosylated peroxidase from royal palm tree (Roystonea regia). J.Struct.Biol. 2010 169 226 242 3IOQ Crystal structure of the Carica candamarcensis cysteine protease CMS1MS2 in complex with E-64. 2009-08-14 2010-02-16 Gomes, M.T.R.,Teixeira, R.D.,Salas, C.E.,Nagem, R.A.P. Crystal structure of the Carica candamarcensis cysteine protease CMS1MS2 in complex with E-64 To be Published 0 0 0 0 3IXR Crystal Structure of Xylella fastidiosa PrxQ C47S Mutant 2009-09-04 2010-03-23 Horta, B.B.,Oliveira, M.A.,Discola, K.F.,Cussiol, J.R.R.,Netto, L.E.S. Biochemical and Structural Analysis Indicates that PrxQ, a Cys Based Peroxidase from Xylella fastidiosa, possesses high reactivity towards hydroperoxides To be Published 0 0 0 0 3KGS 20211733 V30M mutant human transthyretin (TTR) (apoV30M) pH 7.5 2009-10-29 2010-03-23 Trivella, D.B.,Bleicher, L.,Palmieri, L.C.,Wiggers, H.J.,Montanari, C.A.,Kelly, J.W.,Lima, L.M.,Foguel, D.,Polikarpov, I. Conformational differences between the wild type and V30M mutant transthyretin modulate its binding to genistein: implications to tetramer stability and ligand-binding. J.Struct.Biol. 2010 170 522 531 3KGU 20211733 Wild type human transthyretin (TTR) complexed with genistein (TTRwt:GEN) pH 7.5 2009-10-29 2010-03-23 Trivella, D.B.,Bleicher, L.,Palmieri, L.C.,Wiggers, H.J.,Montanari, C.A.,Kelly, J.W.,Lima, L.M.,Foguel, D.,Polikarpov, I. Conformational differences between the wild type and V30M mutant transthyretin modulate its binding to genistein: implications to tetramer stability and ligand-binding. J.Struct.Biol. 2010 170 522 531 3GPS 20659897 Crystal structure of the F87M/L110M mutant of human transthyretin at pH 5.5 2009-03-23 2010-04-07 Palmieri, L.de.C.,Lima, L.M.,Freire, J.B.,Bleicher, L.,Polikarpov, I.,Almeida, F.C.,Foguel, D. Novel Zn2+-binding sites in human transthyretin: implications for amyloidogenesis and retinol-binding protein recognition. J.Biol.Chem. 2010 285 31731 31741 3GRB 20659897 Crystal structure of the F87M/L110M mutant of human transthyretin at pH 6.5 2009-03-25 2010-04-07 Palmieri, L.de.C.,Lima, L.M.,Freire, J.B.,Bleicher, L.,Polikarpov, I.,Almeida, F.C.,Foguel, D. Novel Zn2+-binding sites in human transthyretin: implications for amyloidogenesis and retinol-binding protein recognition. J.Biol.Chem. 2010 285 31731 31741 3GRG 20659897 Crystal structure of the F87M/L110M mutant of human transthyretin at pH 7.5 2009-03-25 2010-04-07 Palmieri, L.de.C.,Lima, L.M.,Freire, J.B.,Bleicher, L.,Polikarpov, I.,Almeida, F.C.,Foguel, D. Novel Zn2+-binding sites in human transthyretin: implications for amyloidogenesis and retinol-binding protein recognition. J.Biol.Chem. 2010 285 31731 31741 3L3Q 20406804 Mouse importin alpha-pepTM NLS peptide complex 2009-12-17 2010-04-07 Yang, S.N.Y.,Takeda, A.A.S.,Fontes, M.R.M.,Harris, J.M.,Jans, D.A.,Kobe, B. Probing the specificity of binding to the major nuclear localization sequence-binding site of importin-alpha using oriented peptide library screening. J.Biol.Chem. 2010 285 19935 19946 3I3I 20371382 Crystal Structure of Bothropstoxin-I crystallized at 283 K 2009-06-30 2010-04-28 Fernandes, C.A.,Marchi-Salvador, D.P.,Salvador, G.M.,Silva, M.C.,Costa, T.R.,Soares, A.M.,Fontes, M.R. Comparison between apo and complexed structures of bothropstoxin-I reveals the role of Lys122 and Ca(2+)-binding loop region for the catalytically inactive Lys49-PLA(2)s. J.Struct.Biol. 2010 171 31 43 3I03 20371382 Crystal structure of bothropstoxin-I chemically modified by p-bromophenacyl bromide (BPB) - monomeric form at a high resolution 2009-06-24 2010-05-12 Fernandes, C.A.,Marchi-Salvador, D.P.,Salvador, G.M.,Silva, M.C.,Costa, T.R.,Soares, A.M.,Fontes, M.R. Comparison between apo and complexed structures of bothropstoxin-I reveals the role of Lys122 and Ca(2+)-binding loop region for the catalytically inactive Lys49-PLA(2)s. J.Struct.Biol. 2010 171 31 43 3I9A Crystal structure of human transthyretin variant A25T - #1 2009-07-10 2010-08-25 Palmieri, L.C.,Freire, J.B.B.,Palhano, F.L.,Azevedo, E.P.C.,Foguel, D.,Lima, L.M.T.R. Crystal structure of human transthyretin variant A25T - #1 To be Published 0 0 0 0 3JR8 20878713 Crystal Structure of BthTX-II (Asp49-PLA2 from Bothrops jararacussu snake venom) with calcium ions 2009-09-08 2010-09-08 dos Santos, J.I.,Cintra-Francischinelli, M.,Borges, R.J.,Fernandes, C.A.,Pizzo, P.,Cintra, A.C.,Braz, A.S.,Soares, A.M.,Fontes, M.R. Structural, functional, and bioinformatics studies reveal a new snake venom homologue phospholipase A2 class. Proteins 2011 79 61 78 3KSJ The alkanesulfonate-binding protein SsuA from Xabthomonas axonopodis pv. citri bound to MES 2009-11-23 2010-10-13 Balan, A.,Araujo, F.T.,Barbosa, J.A.R.G. The crystallographic structure of the SsuA protein reveals how alkanesulfonates enter into the cell To be Published 0 0 0 0 3KSX The alkanesulfonate-binding protein SsuA from Xanthomonas axonopodis pv. citri bound to MOPS 2009-11-23 2010-10-13 Balan, A.,Araujo, F.T.,Barbosa, J.A.R.G. The crystallographic structure of the SsuA protein reveals how alkanesulfonates enter into the cell To be Published 0 0 0 0 3N8T 21104698 Native structure of TK1436, a GH57 branching enzyme from hyperthermophilic archaeon Thermococcus kodakaraensis 2010-05-28 2010-10-27 Santos, C.R.,Tonoli, C.C.,Trindade, D.M.,Betzel, C.,Takata, H.,Kuriki, T.,Kanai, T.,Imanaka, T.,Arni, R.K.,Murakami, M.T. Structural basis for branching-enzyme activity of glycoside hydrolase family 57: Structure and stability studies of a novel branching enzyme from the hyperthermophilic archaeon Thermococcus Kodakaraensis KOD1. Proteins 2011 79 547 557 3N92 21104698 Crystal structure of TK1436, a GH57 branching enzyme from hyperthermophilic archaeon Thermococcus kodakaraensis, in complex with glucose 2010-05-28 2010-10-27 Santos, C.R.,Tonoli, C.C.,Trindade, D.M.,Betzel, C.,Takata, H.,Kuriki, T.,Kanai, T.,Imanaka, T.,Arni, R.K.,Murakami, M.T. Structural basis for branching-enzyme activity of glycoside hydrolase family 57: Structure and stability studies of a novel branching enzyme from the hyperthermophilic archaeon Thermococcus Kodakaraensis KOD1. Proteins 2011 79 547 557 3N98 21104698 Crystal structure of TK1436, a GH57 branching enzyme from hyperthermophilic archaeon Thermococcus kodakaraensis, in complex with glucose and additives 2010-05-28 2010-10-27 Santos, C.R.,Tonoli, C.C.,Trindade, D.M.,Betzel, C.,Takata, H.,Kuriki, T.,Kanai, T.,Imanaka, T.,Arni, R.K.,Murakami, M.T. Structural basis for branching-enzyme activity of glycoside hydrolase family 57: Structure and stability studies of a novel branching enzyme from the hyperthermophilic archaeon Thermococcus Kodakaraensis KOD1. Proteins 2011 79 547 557 3NEE 20937391 Wild type human transthyretin (TTR) complexed with GC-1 (TTRwt:GC-1) 2010-06-08 2010-11-24 Trivella, D.B.,Sairre, M.I.,Foguel, D.,Lima, L.M.,Polikarpov, I. The binding of synthetic triiodo l-thyronine analogs to human transthyretin: molecular basis of cooperative and non-cooperative ligand recognition. J.Struct.Biol. 2011 173 323 332 3NEO 20937391 Wild type human transthyretin (TTR) complexed with GC-24 (TTRwt:GC-24) 2010-06-09 2010-11-24 Trivella, D.B.,Sairre, M.I.,Foguel, D.,Lima, L.M.,Polikarpov, I. The binding of synthetic triiodo l-thyronine analogs to human transthyretin: molecular basis of cooperative and non-cooperative ligand recognition. J.Struct.Biol. 2011 173 323 332 3NES 20937391 V30M mutant human transthyretin (TTR) complexed with GC-1 (V30M:GC-1) 2010-06-09 2010-11-24 Trivella, D.B.,Sairre, M.I.,Foguel, D.,Lima, L.M.,Polikarpov, I. The binding of synthetic triiodo l-thyronine analogs to human transthyretin: molecular basis of cooperative and non-cooperative ligand recognition. J.Struct.Biol. 2011 173 323 332 3NEX 20937391 V30M mutant human transthyretin (TTR) complexed with GC-24 (V30M:GC-24) 2010-06-09 2010-11-24 Trivella, D.B.,Sairre, M.I.,Foguel, D.,Lima, L.M.,Polikarpov, I. The binding of synthetic triiodo l-thyronine analogs to human transthyretin: molecular basis of cooperative and non-cooperative ligand recognition. J.Struct.Biol. 2011 173 323 332 3N1C 21147773 Crystal structure of the phosphofructokinase-2 from Escherichia coli in complex with fructose-6-phosphate 2010-05-15 2010-12-08 Cabrera, R.,Baez, M.,Pereira, H.M.,Caniuguir, A.,Garratt, R.C.,Babul, J. The Crystal Complex of Phosphofructokinase-2 of Escherichia coli with Fructose-6-phosphate: KINETIC AND STRUCTURAL ANALYSIS OF THE ALLOSTERIC ATP INHIBITION. J.Biol.Chem. 2011 286 5774 5783 3I9I Crystal structure of human transthyretin variant A25T - #2 2009-07-11 2011-02-23 Palmieri, L.C.,Freire, J.B.B.,Palhano, F.L.,Azevedo, E.P.C.,Foguel, D.,Lima, L.M.T.R. Crystal structure of human transthyretin variant A25T - #2 To be Published 0 0 0 0 3NGR 21528129 Crystal structure of Leishmania nucleoside diphosphate kinase b with unordered nucleotide-binding loop. 2010-06-13 2011-04-27 Souza, T.A.,Trindade, D.M.,Tonoli, C.C.,Santos, C.R.,Ward, R.J.,Arni, R.K.,Oliveira, A.H.,Murakami, M.T. Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding. Mol Biosyst 2011 7 2189 2195 3NGS 21528129 Structure of Leishmania nucleoside diphosphate kinase b with ordered nucleotide-binding loop 2010-06-13 2011-04-27 Souza, T.A.,Trindade, D.M.,Tonoli, C.C.,Santos, C.R.,Ward, R.J.,Arni, R.K.,Oliveira, A.H.,Murakami, M.T. Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding. Mol Biosyst 2011 7 2189 2195 3NGT 21528129 Structure of Leishmania NDKb complexed with AMP. 2010-06-13 2011-04-27 Souza, T.A.,Trindade, D.M.,Tonoli, C.C.,Santos, C.R.,Ward, R.J.,Arni, R.K.,Oliveira, A.H.,Murakami, M.T. Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding. Mol Biosyst 2011 7 2189 2195 3NGU 21528129 Structure of Leishmania NDKb complexed with ADP. 2010-06-13 2011-04-27 Souza, T.A.,Trindade, D.M.,Tonoli, C.C.,Santos, C.R.,Ward, R.J.,Arni, R.K.,Oliveira, A.H.,Murakami, M.T. Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding. Mol Biosyst 2011 7 2189 2195 3NIY 21070746 Crystal structure of native xylanase 10B from Thermotoga petrophila RKU-1 2010-06-16 2011-05-04 Santos, C.R.,Meza, A.N.,Hoffmam, Z.B.,Silva, J.C.,Alvarez, T.M.,Ruller, R.,Giesel, G.M.,Verli, H.,Squina, F.M.,Prade, R.A.,Murakami, M.T. Thermal-induced conformational changes in the product release area drive the enzymatic activity of xylanases 10B: Crystal structure, conformational stability and functional characterization of the xylanase 10B from Thermotoga petrophila RKU-1. Biochem.Biophys.Res.Commun. 2010 403 214 219 3NJ3 21070746 Crystal structure of xylanase 10B from Thermotoga petrophila RKU-1 in complex with xylobiose 2010-06-16 2011-05-04 Santos, C.R.,Meza, A.N.,Hoffmam, Z.B.,Silva, J.C.,Alvarez, T.M.,Ruller, R.,Giesel, G.M.,Verli, H.,Squina, F.M.,Prade, R.A.,Murakami, M.T. Thermal-induced conformational changes in the product release area drive the enzymatic activity of xylanases 10B: Crystal structure, conformational stability and functional characterization of the xylanase 10B from Thermotoga petrophila RKU-1. Biochem.Biophys.Res.Commun. 2010 403 214 219 3PRV 21528129 Nucleoside diphosphate kinase B from Trypanosoma cruzi 2010-11-30 2011-05-18 Souza, T.A.,Trindade, D.M.,Tonoli, C.C.,Santos, C.R.,Ward, R.J.,Arni, R.K.,Oliveira, A.H.,Murakami, M.T. Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding. Mol Biosyst 2011 7 2189 2195 3OV5 21589901 Atomic structure of the Xanthomonas citri VirB7 globular domain. 2010-09-15 2011-06-01 Souza, D.P.,Andrade, M.O.,Alvarez-Martinez, C.E.,Arantes, G.M.,Farah, C.S.,Salinas, R.K. A Component of the Xanthomonadaceae Type IV Secretion System Combines a VirB7 Motif with a N0 Domain Found in Outer Membrane Transport Proteins. Plos Pathog. 2011 7 0 0 3PQJ 21632538 Crystal Structure of the transcriptional repressor BigR from Xylella fastidiosa 2010-11-26 2011-06-01 Guimaraes, B.G.,Barbosa, R.L.,Soprano, A.S.,Campos, B.M.,de Souza, T.A.,Tonoli, C.C.,Leme, A.F.,Murakami, M.T.,Benedetti, C.E. Plant Pathogenic Bacteria Utilize Biofilm Growth-associated Repressor (BigR), a Novel Winged-helix Redox Switch, to Control Hydrogen Sulfide Detoxification under Hypoxia. J.Biol.Chem. 2011 286 26148 26157 3PQK 21632538 Crystal Structure of the transcriptional repressor BigR from Xylella fastidiosa 2010-11-26 2011-06-01 Guimaraes, B.G.,Barbosa, R.L.,Soprano, A.S.,Campos, B.M.,de Souza, T.A.,Tonoli, C.C.,Leme, A.F.,Murakami, M.T.,Benedetti, C.E. Plant Pathogenic Bacteria Utilize Biofilm Growth-associated Repressor (BigR), a Novel Winged-helix Redox Switch, to Control Hydrogen Sulfide Detoxification under Hypoxia. J.Biol.Chem. 2011 286 26148 26157 3RLH 21616057 Crystal structure of a class II phospholipase D from Loxosceles intermedia venom 2011-04-19 2011-06-29 de Giuseppe, P.O.,Ullah, A.,Silva, D.T.,Gremski, L.H.,Wille, A.C.,Chaves Moreira, D.,Ribeiro, A.S.,Chaim, O.M.,Murakami, M.T.,Veiga, S.S.,Arni, R.K. Structure of a novel class II phospholipase D: Catalytic cleft is modified by a disulphide bridge. Biochem.Biophys.Res.Commun. 2011 409 622 627 3O5S Crystal Structure of the endo-beta-1,3-1,4 glucanase from Bacillus subtilis (strain 168) 2010-07-28 2011-07-13 Furtado, G.P.,Ribeiro, L.F.,Santos, C.R.,Tonoli, C.C.,De Souza, A.R.,Oliveira, R.R.,Tyago, M. Biochemical and structural characterization of a Beta-1,3 1,4-glucanase from Bacillus subtilis 168 PROCESS BIOCHEM 2011 46 1202 1206 3NVL 22458781 Crystal Structure of Phosphoglycerate Mutase from Trypanosoma brucei 2010-07-08 2011-07-27 Mercaldi, G.F.,Pereira, H.M.,Cordeiro, A.T.,Michels, P.A.,Thiemann, O.H. Crystal structure of phosphoglycerate mutase from Trypanosoma brucei. Febs J. 2012 279 2012 2021 3RZX 21806995 Mouse importin alpha-Ku70 NLS peptide complex 2011-05-12 2011-08-03 Takeda, A.A.,de Barros, A.C.,Chang, C.W.,Kobe, B.,Fontes, M.R. Structural basis of importin-alpha-mediated nuclear transport for Ku70 and Ku80. J.Mol.Biol. 2011 412 226 234 3O7T Crystal Structure of Cyclophilin A from Moniliophthora perniciosa 2010-07-31 2011-08-10 Monzani, P.S.,Pereira, H.M.,Gramacho, K.P.,Meirelles, F.V.,Oliva, G.,Cascardo, J.C.M. Crystal Structures of apo-cyclophilin and bounded cyclosporine A from Moniliophthora perniciosa To be Published 0 0 0 0 3OZK Crystal structure of human transthyretin variant A25T in complex with thyroxine (T4) 2010-09-25 2011-08-24 Lima, L.M.T.R.,Palmieri, L.C.,Foguel, D.,Palhano, F.L. Crystal structure of human transthyretin variant A25T in complex with thyroxine (T4) To be Published 0 0 0 0 3RLG 21301094 Crystal structure of Loxosceles intermedia phospholipase D isoform 1 H12A mutant 2011-04-19 2011-08-24 Ullah, A.,de Giuseppe, P.O.,Murakami, M.T.,Trevisan-Silva, D.,Wille, A.C.,Chaves-Moreira, D.,Gremski, L.H.,da Silveira, R.B.,Sennf-Ribeiro, A.,Chaim, O.M.,Veiga, S.S.,Arni, R.K. Crystallization and preliminary X-ray diffraction analysis of a class II phospholipase D from Loxosceles intermedia venom. Acta Crystallogr.,Sect.F 2011 67 234 236 3PZT 21880019 Structure of the endo-1,4-beta-glucanase from Bacillus subtilis 168 with manganese(II) ion 2010-12-14 2011-09-14 Santos, C.R.,Paiva, J.H.,Sforca, M.L.,Neves, J.L.,Navarro, R.Z.,Cota, J.,Akao, P.K.,Hoffmam, Z.B.,Meza, A.N.,Smetana, J.H.,Nogueira, M.L.,Polikarpov, I.,Xavier-Neto, J.,Squina, F.M.,Ward, R.J.,Ruller, R.,Zeri, A.C.,Murakami, M.T. Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168. Biochem.J. 2012 441 95 104 3PZU 21880019 P212121 crystal form of the endo-1,4-beta-glucanase from Bacillus subtilis 168 2010-12-14 2011-09-14 Santos, C.R.,Paiva, J.H.,Sforca, M.L.,Neves, J.L.,Navarro, R.Z.,Cota, J.,Akao, P.K.,Hoffmam, Z.B.,Meza, A.N.,Smetana, J.H.,Nogueira, M.L.,Polikarpov, I.,Xavier-Neto, J.,Squina, F.M.,Ward, R.J.,Ruller, R.,Zeri, A.C.,Murakami, M.T. Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168. Biochem.J. 2012 441 95 104 3PZV 21880019 C2 crystal form of the endo-1,4-beta-glucanase from Bacillus subtilis 168 2010-12-14 2011-09-14 Santos, C.R.,Paiva, J.H.,Sforca, M.L.,Neves, J.L.,Navarro, R.Z.,Cota, J.,Akao, P.K.,Hoffmam, Z.B.,Meza, A.N.,Smetana, J.H.,Nogueira, M.L.,Polikarpov, I.,Xavier-Neto, J.,Squina, F.M.,Ward, R.J.,Ruller, R.,Zeri, A.C.,Murakami, M.T. Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168. Biochem.J. 2012 441 95 104 3OZL Crystal structure of human transthyretin variant A25T in complex with flufenamic acid. 2010-09-25 2011-09-28 Lima, L.M.T.R.,Palmieri, L.C.,Foguel, D.,Palhano, F.L. Crystal structure of human transthyretin variant A25T in complex with flufenamic acid. To be Published 0 0 0 0 3PMP Crystal Structure of Cyclophilin A from Moniliophthora perniciosa in complex with Cyclosporin A 2010-11-17 2011-11-23 Monzani, P.,Pereira, H.M.,Gramacho, K.P.,Meirelles, F.V.,Oliva, G.,Cascardo, J.C.C. Crystal Structure of Cyclophilin A from Moniliophthora perniciosa To be Published 0 0 0 0 3PZ9 Native structure of endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 2010-12-14 2011-12-28 Santos, C.R.,Meza, A.N.,Paiva, J.H.,Silva, J.C.,Ruller, R.,Prade, R.A.,Squina, F.M.,Murakami, M.T. Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 To be Published 0 0 0 0 3PZG I222 crystal form of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 2010-12-14 2011-12-28 Santos, C.R.,Meza, A.N.,Paiva, J.H.,Silva, J.C.,Ruller, R.,Prade, R.A.,Squina, F.M.,Murakami, M.T. Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 To be Published 0 0 0 0 3PZI Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 in complex with beta-D-glucose 2010-12-14 2011-12-28 Santos, C.R.,Meza, A.N.,Paiva, J.H.,Silva, J.C.,Ruller, R.,Prade, R.A.,Squina, F.M.,Murakami, M.T. Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 To be Published 0 0 0 0 3PZM Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 with three glycerol molecules 2010-12-14 2011-12-28 Santos, C.R.,Meza, A.N.,Paiva, J.H.,Silva, J.C.,Ruller, R.,Prade, R.A.,Squina, F.M.,Murakami, M.T. Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 To be Published 0 0 0 0 3PZN Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 with citrate and glycerol 2010-12-14 2011-12-28 Santos, C.R.,Meza, A.N.,Paiva, J.H.,Silva, J.C.,Ruller, R.,Prade, R.A.,Squina, F.M.,Murakami, M.T. Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 To be Published 0 0 0 0 3PZO Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 in complex with three maltose molecules 2010-12-14 2011-12-28 Santos, C.R.,Meza, A.N.,Paiva, J.H.,Silva, J.C.,Ruller, R.,Prade, R.A.,Squina, F.M.,Murakami, M.T. Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 To be Published 0 0 0 0 3PZQ Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 with maltose and glycerol 2010-12-14 2011-12-28 Santos, C.R.,Meza, A.N.,Paiva, J.H.,Silva, J.C.,Ruller, R.,Prade, R.A.,Squina, F.M.,Murakami, M.T. Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 To be Published 0 0 0 0 3SS5 22228304 Crystal structure of mouse Glutaminase C, L-glutamate-bound form 2011-07-07 2012-01-11 Cassago, A.,Ferreira, A.P.,Ferreira, I.M.,Fornezari, C.,Gomes, E.R.,Greene, K.S.,Pereira, H.M.,Garratt, R.C.,Dias, S.M.,Ambrosio, A.L. Mitochondrial localization and structure-based phosphate activation mechanism of Glutaminase C with implications for cancer metabolism. Proc.Natl.Acad.Sci.USA 2012 109 1092 1097 3QJ3 22659439 Structure of digestive procathepsin L2 proteinase from Tenebrio molitor larval midgut 2011-01-28 2012-02-01 Beton, D.,Guzzo, C.R.,Ribeiro, A.F.,Farah, C.S.,Terra, W.R. The 3D structure and function of digestive cathepsin L-like proteinases of Tenebrio molitor larval midgut. Insect Biochem.Mol.Biol. 2012 42 655 664 3S2C 21796714 Structure of the thermostable GH51 alpha-L-arabinofuranosidase from Thermotoga petrophila RKU-1 2011-05-16 2012-02-01 Souza, T.A.,Santos, C.R.,Souza, A.R.,Oldiges, D.P.,Ruller, R.,Prade, R.A.,Squina, F.M.,Murakami, M.T. Structure of a novel thermostable GH51 Alpha-L-arabinofuranosidase from Thermotoga petrophila RKU-1 Protein Sci. 2011 20 1632 1637 2Y9N Cellobiohydrolase I Cel7A from Trichoderma harzianum at 2.9 A resolution 2011-02-15 2012-02-29 Textor, L.C.,Colussi, F.,Serpa, V.,Squina, F.,Pereira Jr, N.,Polikarpov, I. Cellobiohydrolase I from Trichoderma Harzianum: Structural and Enzymatic Characterization To be Published 0 0 0 0 3QNL 22205953 Crystal structure of PrTX-I complexed to Rosmarinic Acid 2011-02-08 2012-02-29 Dos Santos, J.I.,Cardoso, F.F.,Soares, A.M.,Dal Pai Silva, M.,Gallacci, M.,Fontes, M.R. Structural and Functional Studies of a Bothropic Myotoxin Complexed to Rosmarinic Acid: New Insights into Lys49-PLA(2) Inhibition. Plos One 2011 6 0 0 4DFS Structure of the catalytic domain of an endo-1,3-beta-glucanase (laminarinase) from Thermotoga petrophila RKU-1 2012-01-24 2012-03-14 Meza, A.N.,Ruller, R.,Prade, R.A.,Squina, F.M.,Santos, C.R.,Murakami, M.T. Structural studies of an endo-1,3-beta-glucanase from Thermotoga petrophila RKU-1 To be Published 0 0 0 0 3SZ1 22391103 Human PPAR gamma ligand binding domain in complex with luteolin and myristic acid 2011-07-18 2012-03-21 Puhl, A.C.,Bernardes, A.,Silveira, R.L.,Yuan, J.,Campos, J.L.,Saidemberg, D.M.,Palma, M.S.,Cvoro, A.,Ayers, S.D.,Webb, P.,Reinach, P.S.,Skaf, M.S.,Polikarpov, I. Mode of peroxisome proliferator-activated receptor gamma activation by luteolin. Mol.Pharmacol. 2012 81 788 799 4E4C Crystal structure of Notexin at 1.8 A resolution 2012-03-12 2012-03-28 Ullah, A.,Spencer, P.,Murakami, M.T.,Arni, R.K. High resolution structure of Notexin To be Published 0 0 0 0 4E0V 22490662 Structure of L-amino acid oxidase from the B. jararacussu venom 2012-03-05 2012-04-25 Ullah, A.,Souza, T.A.,Abrego, J.R.,Betzel, C.,Murakami, M.T.,Arni, R.K. Structural insights into selectivity and cofactor binding in snake venom L-amino acid oxidases. Biochem.Biophys.Res.Commun. 2012 421 124 128 4DCF 22584077 Structure of MTX-II from Bothrops brazili 2012-01-17 2012-06-13 Ullah, A.,Souza, T.A.,Betzel, C.,Murakami, M.T.,Arni, R.K. Crystallographic portrayal of different conformational states of a Lys49 phospholipase A2 homologue: insights into structural determinants for myotoxicity and dimeric configuration. Int.J.Biol.Macromol. 2012 51 209 214 3UVU 22751659 Structural basis of nuclear import of Flap endonuclease 1 (FEN1) 2011-11-30 2012-06-27 de Barros, A.C.,Takeda, A.A.,Chang, C.W.,Kobe, B.,Fontes, M.R. Structural basis of nuclear import of flap endonuclease 1 (FEN1). Acta Crystallogr.,Sect.D 2012 68 743 750 3TKM 22606221 Crystal structure PPAR delta binding GW0742 2011-08-27 2012-07-04 Batista, F.A.,Trivella, D.B.,Bernardes, A.,Gratieri, J.,Oliveira, P.S.,Figueira, A.C.,Webb, P.,Polikarpov, I. Structural Insights into Human Peroxisome Proliferator Activated Receptor Delta (PPAR-Delta) Selective Ligand Binding. Plos One 2012 7 0 0 3SUJ 23902259 Crystal structure of cerato-platanin 1 from M. perniciosa (MpCP1) 2011-07-11 2012-07-11 de O Barsottini, M.R.,de Oliveira, J.F.,Adamoski, D.,Teixeira, P.J.,do Prado, P.F.,Tiezzi, H.O.,Sforca, M.L.,Cassago, A.,Portugal, R.V.,de Oliveira, P.S.,de M Zeri, A.C.,Dias, S.M.,Pereira, G.A.,Ambrosio, A.L. Functional diversification of cerato-platanins in Moniliophthora perniciosa as seen by differential expression and protein function specialization. Mol. Plant Microbe Interact. 2013 26 1281 1293 3SUK 23902259 Crystal structure of cerato-platanin 2 from M. perniciosa (MpCP2) 2011-07-11 2012-07-11 de O Barsottini, M.R.,de Oliveira, J.F.,Adamoski, D.,Teixeira, P.J.,do Prado, P.F.,Tiezzi, H.O.,Sforca, M.L.,Cassago, A.,Portugal, R.V.,de Oliveira, P.S.,de M Zeri, A.C.,Dias, S.M.,Pereira, G.A.,Ambrosio, A.L. Functional diversification of cerato-platanins in Moniliophthora perniciosa as seen by differential expression and protein function specialization. Mol. Plant Microbe Interact. 2013 26 1281 1293 3TH1 Crystal structure of chlorocatechol 1,2-dioxygenase from Pseudomonas putida 2011-08-18 2012-08-22 Rustiguel, J.K.,Barbosa, L.R.S.,Araujo, A.P.U.,Nonato, M.C. Crystal Structure of chlorocatechol 1,2-dioxygenase from Pseudomonas putida To be Published 0 0 0 0 3TJX Crystal Structure of Leishmania major dihydroorotate dehydrogenase mutant H174A 2011-08-25 2012-09-12 de Souza, A.L.,Nonato, M.C.,Pinheiro, M.P. Crystal Structure of Leishmania major dihydroorotate dehydrogenase mutant H174A To be Published 0 0 0 0 4D8V 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis at pH 4.2 2012-01-11 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4D8X 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in space group P6322 at pH 4.6 2012-01-11 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4D8Y 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in space group P212121 at pH 5.6 2012-01-11 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4D98 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in space group H32 at pH 7.5 2012-01-11 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4D9H 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with adenosine 2012-01-11 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4DA0 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with 2'-deoxyguanosine 2012-01-12 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4DA6 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with ganciclovir 2012-01-12 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4DA7 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with aciclovir 2012-01-12 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4DA8 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with 8-bromoguanosine 2012-01-12 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4DAB 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with hypoxanthine 2012-01-12 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4DAE 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with 6-chloroguanosine 2012-01-12 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4DAN 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with 2-fluoroadenosine 2012-01-13 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4DAO 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with adenine 2012-01-13 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4DAR 22957058 Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in complex with tubercidin 2012-01-13 2012-09-26 de Giuseppe, P.O.,Martins, N.H.,Meza, A.N.,Dos Santos, C.R.,Pereira, H.D.,Murakami, M.T. Insights into phosphate cooperativity and influence of substrate modifications on binding and catalysis of hexameric purine nucleoside phosphorylases. Plos One 2012 7 0 0 4EKJ 22993088 Crystal structure of a monomeric beta-xylosidase from Caulobacter crescentus CB15 2012-04-09 2012-09-26 Santos, C.R.,Polo, C.C.,Correa, J.M.,Simao, R.C.,Seixas, F.A.,Murakami, M.T. The accessory domain changes the accessibility and molecular topography of the catalytic interface in monomeric GH39 beta-xylosidases. Acta Crystallogr.,Sect.D 2012 68 1339 1345 3UQ6 23275171 Adenosine kinase from Schistosoma mansoni in complex with adenosine and AMP 2011-11-19 2012-10-31 Romanello, L.,Bachega, J.F.,Cassago, A.,Brandao-Neto, J.,Demarco, R.,Garratt, R.C.,Pereira, H.D. Adenosine kinase from Schistosoma mansoni: structural basis for the differential incorporation of nucleoside analogues. Acta Crystallogr.,Sect.D 2013 69 126 136 2YOK 23114223 Cellobiohydrolase I Cel7A from Trichoderma harzianum at 1.7 A resolution 2012-10-25 2012-11-14 Textor, L.C.,Colussi, F.,Silveira, R.L.,Serpa, V.,De Mello, B.L.,Muniz, J.R.C.,Squina, F.M.,Pereira, N.J.,Skaf, M.S.,Polikarpov, I. Joint X-Ray Crystallographic and Molecular Dynamics Study of Cellobiohydrolase I from Trichoderma Harzianum: Deciphering the Structural Features of Cellobiohydrolase Catalytic Activity. FEBS J. 2013 280 56 0 3UQE Crystal structure of the Phosphofructokinase-2 mutant Y23D from Escherichia coli 2011-11-20 2012-11-21 Pereira, H.M.,Caniuguir, A.,Baez, M.,Cabrera, R.,Garratt, R.C.,Babul, J. Structure of E. coli PFK2 mutant Y23D To be Published 0 0 0 0 4DER 22842046 Crystal Structure of the Wild Type TTR Binding Apigenin (TTRwt:API) 2012-01-21 2012-11-21 Trivella, D.B.,Dos Reis, C.V.,Lima, L.M.,Foguel, D.,Polikarpov, I. Flavonoid interactions with human transthyretin: Combined structural and thermodynamic analysis. J.Struct.Biol. 2012 180 143 153 4DES 22842046 Crystal Structure of the Wild Type TTR Binding Chrysin (TTRwt:CHR) 2012-01-21 2012-11-21 Trivella, D.B.,Dos Reis, C.V.,Lima, L.M.,Foguel, D.,Polikarpov, I. Flavonoid interactions with human transthyretin: Combined structural and thermodynamic analysis. J.Struct.Biol. 2012 180 143 153 4DET 22842046 Crystal Structure of the Wild Type TTR Binding Kaempferol (TTRwt:KAE) 2012-01-22 2012-11-21 Trivella, D.B.,Dos Reis, C.V.,Lima, L.M.,Foguel, D.,Polikarpov, I. Flavonoid interactions with human transthyretin: Combined structural and thermodynamic analysis. J.Struct.Biol. 2012 180 143 153 4DEU 22842046 Crystal Structure of the Wild Type TTR Binding Naringenin (TTRwt:NAR) 2012-01-22 2012-11-21 Trivella, D.B.,Dos Reis, C.V.,Lima, L.M.,Foguel, D.,Polikarpov, I. Flavonoid interactions with human transthyretin: Combined structural and thermodynamic analysis. J.Struct.Biol. 2012 180 143 153 4DEW 22842046 Crystal Structure of the Wild Type TTR Binding Luteolin (TTRwt:LUT) 2012-01-22 2012-11-21 Trivella, D.B.,Dos Reis, C.V.,Lima, L.M.,Foguel, D.,Polikarpov, I. Flavonoid interactions with human transthyretin: Combined structural and thermodynamic analysis. J.Struct.Biol. 2012 180 143 153 3UL5 23241243 Saccharum officinarum canecystatin-1 in space group C2221 2011-11-10 2012-11-28 Valadares, N.F.,de Oliveira-Silva, R.,Cavini, I.A.,Marques, I.A.,Pereira, H.D.,Soares-Costa, A.,Henrique-Silva, F.,Kalbitzer, H.R.,Munte, C.E.,Garratt, R.C. X-ray crystallography and NMR studies of domain-swapped canecystatin-1. Febs J. 2013 280 1028 1038 3UQD 30996866 Crystal structure of the Phosphofructokinase-2 from Escherichia coli in complex with substrates and products 2011-11-20 2012-11-28 Murillo-Lopez, J.,Zinovjev, K.,Pereira, H.,Caniuguir, A.,Garratt, R.,Babul, J.,Recabarren, R.,Alzate-Morales, J.,Caballero, J.,Tunon, I.,Cabrera, R. Studying the phosphoryl transfer mechanism of theE. coliphosphofructokinase-2: from X-ray structure to quantum mechanics/molecular mechanics simulations. Chem Sci 2019 10 2882 2892 4BC3 23179721 Crystal structure of human D-xylulokinase 2012-10-01 2012-11-28 Bunker, R.D.,Bulloch, E.M.M.,Dickson, J.M.J.,Loomes, K.M.,Baker, E.N. Structure and Function of Human Xylulokinase, an Enzyme with Important Roles in Carbohydrate Metabolism J.Biol.Chem. 2013 288 1643 0 4BC4 23179721 Crystal structure of human D-xylulokinase in complex with D-xylulose 2012-10-01 2012-11-28 Bunker, R.D.,Bulloch, E.M.M.,Dickson, J.M.J.,Loomes, K.M.,Baker, E.N. Structure and Function of Human Xylulokinase, an Enzyme with Important Roles in Carbohydrate Metabolism J.Biol.Chem. 2013 288 1643 0 3UL6 23241243 Saccharum officinarum canecystatin-1 in space group P6422 2011-11-10 2012-12-12 Valadares, N.F.,de Oliveira-Silva, R.,Cavini, I.A.,Marques, I.A.,Pereira, H.D.,Soares-Costa, A.,Henrique-Silva, F.,Kalbitzer, H.R.,Munte, C.E.,Garratt, R.C. X-ray crystallography and NMR studies of domain-swapped canecystatin-1. Febs J. 2013 280 1028 1038 4EF8 23116399 Crystal structure of dihydroorotate dehydrogenase from Leishmania major in complex with Phenyl isothiocyanate 2012-03-29 2012-12-12 Pinheiro, M.P.,Emery, F.S.,Nonato, M.C. Target sites for the design of anti-trypanosomatid drugs based on the structure of dihydroorotate dehydrogenase. Curr.Pharm.Des. 2013 19 2615 2627 4EF9 23116399 Crystal structure of dihydroorotate dehydrogenase from Leishmania major in complex with 4-Nitrophenyl isothiocyanate 2012-03-29 2012-12-12 Pinheiro, M.P.,Emery, F.S.,Nonato, M.C. Target sites for the design of anti-trypanosomatid drugs based on the structure of dihydroorotate dehydrogenase. Curr.Pharm.Des. 2013 19 2615 2627 4GSO 23139169 structure of Jararacussin-I 2012-08-28 2012-12-12 Ullah, A.,Souza, T.A.,Zanphorlin, L.M.,Mariutti, R.B.,Santana, V.S.,Murakami, M.T.,Arni, R.K. Crystal structure of Jararacussin-I: The highly negatively charged catalytic interface contributes to macromolecular selectivity in snake venom thrombin-like enzymes. Protein Sci. 2013 22 128 132 4IIZ Crystal structure of wild-type human transthyretin in complex with lumiracoxib 2012-12-20 2013-01-30 Lima, L.M.T.R. Crystal structure of wild-type human transthyretin in complex with lumiracoxib To be Published 0 0 0 0 4EM9 22649490 Human PPAR gamma in complex with nonanoic acids 2012-04-11 2013-03-06 Liberato, M.V.,Nascimento, A.S.,Ayers, S.D.,Lin, J.Z.,Cvoro, A.,Silveira, R.L.,Martinez, L.,Souza, P.C.,Saidemberg, D.,Deng, T.,Amato, A.A.,Togashi, M.,Hsueh, W.A.,Phillips, K.,Palma, M.S.,Neves, F.A.,Skaf, M.S.,Webb, P.,Polikarpov, I. Medium chain fatty acids are selective peroxisome proliferator activated receptor (PPAR) Gamma activators and pan-PPAR partial agonists Plos One 2012 7 0 0 4EMA 22649490 Human peroxisome proliferator-activated receptor gamma in complex with rosiglitazone 2012-04-11 2013-03-06 Liberato, M.V.,Nascimento, A.S.,Ayers, S.D.,Lin, J.Z.,Cvoro, A.,Silveira, R.L.,Martinez, L.,Souza, P.C.,Saidemberg, D.,Deng, T.,Amato, A.A.,Togashi, M.,Hsueh, W.A.,Phillips, K.,Palma, M.S.,Neves, F.A.,Skaf, M.S.,Webb, P.,Polikarpov, I. Medium chain fatty acids are selective peroxisome proliferator activated receptor (PPAR) Gamma activators and pan-PPAR partial agonists Plos One 2012 7 0 0 4E2B High resolution crystal structure of the old yellow enzyme from Trypanosoma cruzi 2012-03-08 2013-03-27 Murakami, M.T.,Rodrigues, N.C.,Gava, L.M.,Canduri, F.,Oliva, G.,Barbosa, L.R.S.,Borgers, J.C. High resolution crystal structure and in solution studies of the old yellow enzyme from Trypanosoma cruzi: Insights into oligomerization, enzyme dynamics and specificity To be Published 0 0 0 0 4E2D Structure of the old yellow enzyme from Trypanosoma cruzi 2012-03-08 2013-03-27 Murakami, M.T.,Rodrigues, N.C.,Gava, L.M.,Canduri, F.,Oliva, G.,Barbosa, L.R.S.,Borgers, J.C. High resolution crystal structure and in solution studies of the Old Yellow Enzyme from Trypanosoma cruzi: Insights into oligomerization, enzyme dynamics and specificity To be Published 0 0 0 0 4FOJ 23507310 1.55 A Crystal Structure of Xanthomonas citri FimX EAL domain in complex with c-diGMP 2012-06-20 2013-03-27 Guzzo, C.R.,Dunger, G.,Salinas, R.K.,Farah, C.S. Structure of the PilZ-FimXEAL-c-di-GMP Complex Responsible for the Regulation of Bacterial Type IV Pilus Biogenesis. J.Mol.Biol. 2013 425 2174 2197 4FOU 23507310 Structure of the PilZ-FimX(EAL domain)-c-di-GMP complex responsible for the regulation of bacterial Type IV pilus biogenesis 2012-06-21 2013-03-27 Guzzo, C.R.,Dunger, G.,Salinas, R.K.,Farah, C.S. Structure of the PilZ-FimXEAL-c-di-GMP Complex Responsible for the Regulation of Bacterial Type IV Pilus Biogenesis. J.Mol.Biol. 2013 425 2174 2197 4H7M 23516599 The X-ray Crystal Structure of the Trichoderma harzianum Endoglucanase 3 from family GH12 2012-09-20 2013-04-03 Prates, E.T.,Stankovic, I.,Silveira, R.L.,Liberato, M.V.,Henrique-Silva, F.,Pereira, N.,Polikarpov, I.,Skaf, M.S. X-ray Structure and Molecular Dynamics Simulations of Endoglucanase 3 from Trichoderma harzianum: Structural Organization and Substrate Recognition by Endoglucanases That Lack Cellulose Binding Module. Plos One 2013 8 0 0 4EWX 23692694 Human Insulin 2012-04-28 2013-05-01 Favero-Retto, M.P.,Palmieri, L.C.,Souza, T.A.,Almeida, F.C.,Lima, L.M. Structural meta-analysis of regular human insulin in pharmaceutical formulations. Eur J Pharm Biopharm 2013 85 1112 1121 4EYP 23692694 Human Insulin 2012-05-01 2013-05-01 Favero-Retto, M.P.,Palmieri, L.C.,Souza, T.A.,Almeida, F.C.,Lima, L.M. Structural meta-analysis of regular human insulin in pharmaceutical formulations. Eur J Pharm Biopharm 2013 85 1112 1121 4F1B 23692694 Human Insulin 2012-05-06 2013-05-08 Favero-Retto, M.P.,Palmieri, L.C.,Souza, T.A.,Almeida, F.C.,Lima, L.M. Structural meta-analysis of regular human insulin in pharmaceutical formulations. Eur J Pharm Biopharm 2013 85 1112 1121 4F1D 23692694 Human Insulin 2012-05-06 2013-05-08 Favero-Retto, M.P.,Palmieri, L.C.,Souza, T.A.,Almeida, F.C.,Lima, L.M. Structural meta-analysis of regular human insulin in pharmaceutical formulations. Eur J Pharm Biopharm 2013 85 1112 1121 4F1F 23692694 Human Insulin 2012-05-06 2013-05-08 Favero-Retto, M.P.,Palmieri, L.C.,Souza, T.A.,Almeida, F.C.,Lima, L.M. Structural meta-analysis of regular human insulin in pharmaceutical formulations. Eur J Pharm Biopharm 2013 85 1112 1121 4F1G 23692694 Human insulin 2012-05-06 2013-05-08 Favero-Retto, M.P.,Palmieri, L.C.,Souza, T.A.,Almeida, F.C.,Lima, L.M. Structural meta-analysis of regular human insulin in pharmaceutical formulations. Eur J Pharm Biopharm 2013 85 1112 1121 4F4T 23692694 Human Insulin 2012-05-11 2013-05-15 Favero-Retto, M.P.,Palmieri, L.C.,Souza, T.A.,Almeida, F.C.,Lima, L.M. Structural meta-analysis of regular human insulin in pharmaceutical formulations. Eur J Pharm Biopharm 2013 85 1112 1121 4F4V 23692694 Human Insulin 2012-05-11 2013-05-15 Favero-Retto, M.P.,Palmieri, L.C.,Souza, T.A.,Almeida, F.C.,Lima, L.M. Structural meta-analysis of regular human insulin in pharmaceutical formulations. Eur J Pharm Biopharm 2013 85 1112 1121 4BCR 23707408 Structure of PPARalpha in complex with WY14643 2012-10-02 2013-05-29 Bernardes, A.,T Souza, P.C.,Muniz, J.R.C.,Ricci, C.G.,Ayers, S.D.,Parekh, N.M.,Godoy, A.S.,Trivella, D.B.B.,Reinach, P.,Webb, P.,Skaf, M.S.,Polikarpov, I. Molecular Mechanism of Peroxisome Proliferator-Activated Receptor Alpha Activation by Wy14643: A New Mode of Ligand Recognition and Receptor Stabilization J.Mol.Biol. 2013 425 2878 0 4GBK 23428413 Crystal structure of aspart insulin at pH 8.5 2012-07-27 2013-06-12 Palmieri, L.C.,Favero-Retto, M.P.,Lourenco, D.,Lima, L.M. A T3R3 hexamer of the human insulin variant B28Asp. Biophys.Chem. 2013 173 1 7 4GBL 23428413 Crystal structure of aspart insulin at pH 8.5 2012-07-27 2013-06-12 Palmieri, L.C.,Favero-Retto, M.P.,Lourenco, D.,Lima, L.M. A T3R3 hexamer of the human insulin variant B28Asp. Biophys.Chem. 2013 173 1 7 4JJM 23709667 Structure of a cyclophilin from Citrus sinensis (CsCyp) in complex with cyclosporin A 2013-03-08 2013-06-12 Campos, B.M.,Sforca, M.L.,Ambrosio, A.L.,Domingues, M.N.,Brasil de Souza Tde, A.,Barbosa, J.A.R.G.,Paes Leme, A.F.,Perez, C.A.,Whittaker, S.B.,Murakami, M.T.,Zeri, A.C.,Benedetti, C.E. A redox 2-cys mechanism regulates the catalytic activity of divergent cyclophilins. Plant Physiol. 2013 162 1311 1323 4KF3 23810946 Crystal Structure of Myotoxin II (MjTX-II), a myotoxic Lys49-phospholipase A2 from Bothrops moojeni. 2013-04-26 2013-07-17 Salvador, G.H.,Cavalcante, W.L.,Dos Santos, J.I.,Gallacci, M.,Soares, A.M.,Fontes, M.R. Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like. Toxicon 2013 0 52 63 4M29 Structure of a GH39 Beta-xylosidase from Caulobacter crescentus 2013-08-05 2013-08-14 Polo, C.C.,Santos, C.R.,Correa, J.M.,Simao, R.C.G.,Seixas, F.A.V.,Murakami, M.T. Structure of a GH39 Beta-xylosidase from Caulobacter crescentus Thesis 0 0 0 0 4L3F 23958637 Crystal structure of Internalin K (InlK) from Listeria monocytogenes 2013-06-05 2013-08-28 Neves, D.,Job, V.,Dortet, L.,Cossart, P.,Dessen, A. Structure of Internalin InlK from the Human Pathogen Listeria monocytogenes. J.Mol.Biol. 2013 425 4520 4529 4J5L 24097982 Structure of the Cargo Binding Domain from Human Myosin Va 2013-02-08 2013-10-09 Nascimento, A.F.,Trindade, D.M.,Tonoli, C.C.,de Giuseppe, P.O.,Assis, L.H.,Honorato, R.V.,de Oliveira, P.S.,Mahajan, P.,Burgess-Brown, N.A.,von Delft, F.,Larson, R.E.,Murakami, M.T. Structural Insights into Functional Overlapping and Differentiation among Myosin V Motors. J.Biol.Chem. 2013 288 34131 34145 4L8T 24097982 Structure of the Cargo Binding Domain from Human Myosin Vc 2013-06-17 2013-10-09 Nascimento, A.F.,Trindade, D.M.,Tonoli, C.C.,de Giuseppe, P.O.,Assis, L.H.,Honorato, R.V.,de Oliveira, P.S.,Mahajan, P.,Burgess-Brown, N.A.,von Delft, F.,Larson, R.E.,Murakami, M.T. Structural Insights into Functional Overlapping and Differentiation among Myosin V Motors. J.Biol.Chem. 2013 288 34131 34145 4K68 23922891 Structure of a novel GH10 endoxylanase retrieved from sugarcane soil metagenome 2013-04-15 2013-10-23 Alvarez, T.M.,Goldbeck, R.,dos Santos, C.R.,Paixao, D.A.,Goncalves, T.A.,Franco Cairo, J.P.,Almeida, R.F.,de Oliveira Pereira, I.,Jackson, G.,Cota, J.,Buchli, F.,Citadini, A.P.,Ruller, R.,Polo, C.C.,de Oliveira Neto, M.,Murakami, M.T.,Squina, F.M. Development and biotechnological application of a novel endoxylanase family GH10 identified from sugarcane soil metagenome. Plos One 2013 8 0 0 4KC7 24469445 Crystal Structure of Endo-1,5-alpha-L-arabinanase from Thermotoga petrophila RKU-1 2013-04-24 2014-02-05 Santos, C.R.,Polo, C.C.,Costa, M.C.,Nascimento, A.F.,Meza, A.N.,Cota, J.,Hoffmam, Z.B.,Honorato, R.V.,Oliveira, P.S.,Goldman, G.H.,Gilbert, H.J.,Prade, R.A.,Ruller, R.,Squina, F.M.,Wong, D.W.,Murakami, M.T. Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases. J.Biol.Chem. 2014 289 7362 7373 4KC8 24469445 Crystal Structure of Endo-1,5-alpha-L-arabinanase from Thermotoga petrophila RKU-1 in complex with TRIS 2013-04-24 2014-02-05 Santos, C.R.,Polo, C.C.,Costa, M.C.,Nascimento, A.F.,Meza, A.N.,Cota, J.,Hoffmam, Z.B.,Honorato, R.V.,Oliveira, P.S.,Goldman, G.H.,Gilbert, H.J.,Prade, R.A.,Ruller, R.,Squina, F.M.,Wong, D.W.,Murakami, M.T. Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases. J.Biol.Chem. 2014 289 7362 7373 4KCA 24469445 Crystal Structure of Endo-1,5-alpha-L-arabinanase from a Bovine Ruminal Metagenomic Library 2013-04-24 2014-02-05 Santos, C.R.,Polo, C.C.,Costa, M.C.,Nascimento, A.F.,Meza, A.N.,Cota, J.,Hoffmam, Z.B.,Honorato, R.V.,Oliveira, P.S.,Goldman, G.H.,Gilbert, H.J.,Prade, R.A.,Ruller, R.,Squina, F.M.,Wong, D.W.,Murakami, M.T. Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases. J.Biol.Chem. 2014 289 7362 7373 4KCB 24469445 Crystal Structure of Exo-1,5-alpha-L-arabinanase from Bovine Ruminal Metagenomic Library 2013-04-24 2014-02-05 Santos, C.R.,Polo, C.C.,Costa, M.C.,Nascimento, A.F.,Meza, A.N.,Cota, J.,Hoffmam, Z.B.,Honorato, R.V.,Oliveira, P.S.,Goldman, G.H.,Gilbert, H.J.,Prade, R.A.,Ruller, R.,Squina, F.M.,Wong, D.W.,Murakami, M.T. Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases. J.Biol.Chem. 2014 289 7362 7373 4M1R 24358302 Structure of a novel cellulase 5 from a sugarcane soil metagenomic library 2013-08-03 2014-02-05 Alvarez, T.M.,Paiva, J.H.,Ruiz, D.M.,Cairo, J.P.,Pereira, I.O.,Paixao, D.A.,de Almeida, R.F.,Tonoli, C.C.,Ruller, R.,Santos, C.R.,Squina, F.M.,Murakami, M.T. Structure and function of a novel cellulase 5 from sugarcane soil metagenome. Plos One 2013 8 0 0 4K21 24865454 Crystal structure of Canavalia boliviana lectin in complex with Xman 2013-04-07 2014-04-09 Bezerra, G.A.,Viertlmayr, R.,Moura, T.R.,Delatorre, P.,Rocha, B.A.,do Nascimento, K.S.,Figueiredo, J.G.,Bezerra, I.G.,Teixeira, C.S.,Simoes, R.C.,Nagano, C.S.,de Alencar, N.M.,Gruber, K.,Cavada, B.S. Structural Studies of an Anti-Inflammatory Lectin from Canavalia boliviana Seeds in Complex with Dimannosides. Plos One 2014 9 0 0 4KB3 Crystal structure of the mitochondrial peroxiredoxin from Leishmania braziliensis in the decameric form 2013-04-23 2014-05-14 Souza, T.A.C.B.,Morais, M.A.B.,Giuseppe, P.O.,Murakami, M.T. Crystal structure of the mitochondrial peroxiredoxin from Leishmania braziliensis in the decameric form To be Published 0 0 0 0 4KCE Crystal structure of the mitochondrial peroxiredoxin from Leishmania braziliensis in the dimeric form 2013-04-24 2014-05-14 Souza, T.A.C.B.,Morais, M.A.B.,Giuseppe, P.O.,Murakami, M.T. Crystal structure of the mitochondrial peroxiredoxin from Leishmania braziliensis in the dimeric form To be Published 0 0 0 0 4L5Y 27935959 Methylthioadenosine phosphorylase from Schistosoma mansoni in APO form 2013-06-11 2014-06-11 Torini, J.R.,Brandao-Neto, J.,DeMarco, R.,Pereira, H.D. Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway. Plos Negl Trop Dis 2016 10 0 0 4L6I 27935959 Methylthioadenosine phosphorylase from Schistosoma mansoni in complex with adenine 2013-06-12 2014-06-25 Torini, J.R.,Brandao-Neto, J.,DeMarco, R.,Pereira, H.D. Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway. Plos Negl Trop Dis 2016 10 0 0 4MDO 24914974 Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens 2013-08-23 2014-06-25 Giuseppe, P.O.,Souza, T.A.C.B.,Souza, F.H.M.,Zanphorlin, L.M.,Machado, C.B.,Ward, R.J.,Jorge, J.A.,Furriel, R.P.M.,Murakami, M.T. Structural basis for glucose tolerance in GH1 beta-glucosidases. Acta Crystallogr.,Sect.D 2014 70 1631 1639 4MDP 24914974 Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens in complex with glucose 2013-08-23 2014-06-25 Giuseppe, P.O.,Souza, T.A.C.B.,Souza, F.H.M.,Zanphorlin, L.M.,Machado, C.B.,Ward, R.J.,Jorge, J.A.,Furriel, R.P.M.,Murakami, M.T. Structural basis for glucose tolerance in GH1 beta-glucosidases. Acta Crystallogr.,Sect.D 2014 70 1631 1639 4LBQ Crystal structure of mouse galectin-1 2013-06-20 2014-07-02 Rustiguel, J.K.,Trabuco, A.C.,Del Cistia Andrade, C.,Stowell, S.R.,Cummings, R.D.,Dias-Baruffi, M.,Nonato, M.C. Crystal structure of mouse galectin-1 To be Published 0 0 0 0 4KPC 25643978 Crystal structure of the nucleoside diphosphate kinase b from Leishmania braziliensis 2013-05-13 2014-07-09 Vieira, P.S.,de Giuseppe, P.O.,Murakami, M.T.,de Oliveira, A.H. Crystal structure and biophysical characterization of the nucleoside diphosphate kinase from Leishmania braziliensis. Bmc Struct.Biol. 2015 15 2 2 4MYE Cymosema roseum seed lectin structure complexed with X-man 2013-09-27 2014-10-01 Barroso-Neto, I.L.,Rocha, B.A.M.,Teixeira, C.S.,Santiago, M.Q.,Souza, L.A.G.,Pires, A.F.,Assreuy, A.M.S.,Delatorre, P.,Cavada, B.S. Cymosema roseum seed lectin structure complexed with X-man To be Published 0 0 0 0 4PMU 25266726 Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P1211) 2014-05-22 2014-10-08 Santos, C.R.,Hoffmam, Z.B.,de Matos Martins, V.P.,Zanphorlin, L.M.,de Paula Assis, L.H.,Honorato, R.V.,Lopes de Oliveira, P.S.,Ruller, R.,Murakami, M.T. Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens. J.Biol.Chem. 2014 289 32186 32200 4PMV 25266726 Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P43212) 2014-05-22 2014-10-08 Santos, C.R.,Hoffmam, Z.B.,de Matos Martins, V.P.,Zanphorlin, L.M.,de Paula Assis, L.H.,Honorato, R.V.,Lopes de Oliveira, P.S.,Ruller, R.,Murakami, M.T. Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens. J.Biol.Chem. 2014 289 32186 32200 4PMX 25266726 Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri in the native form 2014-05-22 2014-10-08 Santos, C.R.,Hoffmam, Z.B.,de Matos Martins, V.P.,Zanphorlin, L.M.,de Paula Assis, L.H.,Honorato, R.V.,Lopes de Oliveira, P.S.,Ruller, R.,Murakami, M.T. Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens. J.Biol.Chem. 2014 289 32186 32200 4PMY 25266726 Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylose 2014-05-22 2014-10-08 Santos, C.R.,Hoffmam, Z.B.,de Matos Martins, V.P.,Zanphorlin, L.M.,de Paula Assis, L.H.,Honorato, R.V.,Lopes de Oliveira, P.S.,Ruller, R.,Murakami, M.T. Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens. J.Biol.Chem. 2014 289 32186 32200 4PMZ 25266726 Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylobiose 2014-05-22 2014-10-08 Santos, C.R.,Hoffmam, Z.B.,de Matos Martins, V.P.,Zanphorlin, L.M.,de Paula Assis, L.H.,Honorato, R.V.,Lopes de Oliveira, P.S.,Ruller, R.,Murakami, M.T. Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens. J.Biol.Chem. 2014 289 32186 32200 4PN2 25266726 Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylotriose 2014-05-22 2014-10-08 Santos, C.R.,Hoffmam, Z.B.,de Matos Martins, V.P.,Zanphorlin, L.M.,de Paula Assis, L.H.,Honorato, R.V.,Lopes de Oliveira, P.S.,Ruller, R.,Murakami, M.T. Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens. J.Biol.Chem. 2014 289 32186 32200 4MQ0 Crystal structure of Parkia biglobosa seed lectin (PBL) in complex with methyl alpha D-mannopyranoside 2013-09-14 2014-12-17 Teixeira, C.S.,Rocha, B.A.M.,Silva, H.C.,Bari, A.U.,Barroso-Neto, I.T.,Santiago, M.Q.,Nagano, C.S.,Nascimento, K.S.,Debray, H.,Delatorre, P.,Cavada, B.S. Crystal structure of Parkia biglobosa seed lectin (PBL) in complex with methyl alpha D-mannopyranoside To be Published 0 0 0 0 4CI4 26185032 Structural basis for GL479 a dual Peroxisome Proliferator-Activated Receptor alpha agonist 2013-12-05 2014-12-24 dos Santos, J.C.,Bernardes, A.,Giampietro, L.,Ammazzalorso, A.,De Filippis, B.,Amoroso, R.,Polikarpov, I. Different binding and recognition modes of GL479, a dual agonist of Peroxisome Proliferator-Activated Receptor alpha / gamma. J. Struct. Biol. 2015 191 332 340 4CI5 26185032 Structural basis for GL479 a dual Peroxisome Proliferator-Activated Receptor gamma agonist 2013-12-05 2014-12-24 dos Santos, J.C.,Bernardes, A.,Giampietro, L.,Ammazzalorso, A.,De Filippis, B.,Amoroso, R.,Polikarpov, I. Different binding and recognition modes of GL479, a dual agonist of Peroxisome Proliferator-Activated Receptor alpha / gamma. J. Struct. Biol. 2015 191 332 340 4NPR Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus 2013-11-22 2014-12-24 Santos, C.R.,Cordeiro, R.L.,Furtado, G.P.,Damasio, A.R.L.,Polizeli, M.L.T.M.,Ward, R.J.,Murakami, M.T. Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus To be Published 0 0 0 0 4NOT Crystal structure of Dioclea sclerocarpa lectin complexed with X-man 2013-11-20 2015-01-21 Barroso-Neto, I.L.,Teixeira, C.S.,Correia, J.L.A.,Santiago, M.Q.,Pinto-Junior, V.R.,Osterne, V.J.S.,Plinio, D.,Rocha, B.A.M.,Cavada, B.S. Crystal structure of Dioclea sclerocarpa lectin complexed with X-man To be Published 0 0 0 0 4W84 25714929 Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in the native form 2014-08-22 2015-03-11 Dos Santos, C.R.,Cordeiro, R.L.,Wong, D.W.,Murakami, M.T. Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family. Biochemistry 2015 54 1930 1942 4W85 25714929 Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in complex with glucose 2014-08-22 2015-03-11 Dos Santos, C.R.,Cordeiro, R.L.,Wong, D.W.,Murakami, M.T. Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family. Biochemistry 2015 54 1930 1942 4W86 25714929 Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in complex with glucose and TRIS 2014-08-22 2015-03-11 Dos Santos, C.R.,Cordeiro, R.L.,Wong, D.W.,Murakami, M.T. Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family. Biochemistry 2015 54 1930 1942 4W87 25714929 Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from metagenomic library, in complex with a xyloglucan oligosaccharide 2014-08-22 2015-03-11 Dos Santos, C.R.,Cordeiro, R.L.,Wong, D.W.,Murakami, M.T. Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family. Biochemistry 2015 54 1930 1942 4W88 25714929 Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in complex with a xyloglucan oligosaccharide and TRIS 2014-08-22 2015-03-11 Dos Santos, C.R.,Cordeiro, R.L.,Wong, D.W.,Murakami, M.T. Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family. Biochemistry 2015 54 1930 1942 4W89 25714929 Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from metagenomic library, in complex with cellotriose 2014-08-22 2015-03-11 Dos Santos, C.R.,Cordeiro, R.L.,Wong, D.W.,Murakami, M.T. Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family. Biochemistry 2015 54 1930 1942 4W8A 25714929 Crystal structure of XEG5B, a GH5 xyloglucan-specific beta-1,4-glucanase from ruminal metagenomic library, in the native form 2014-08-22 2015-03-11 Dos Santos, C.R.,Cordeiro, R.L.,Wong, D.W.,Murakami, M.T. Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family. Biochemistry 2015 54 1930 1942 4W8B 25714929 Crystal structure of XEG5B, a GH5 xyloglucan-specific beta-1,4-glucanase from ruminal metagenomic library, in complex with XXLG 2014-08-22 2015-03-11 Dos Santos, C.R.,Cordeiro, R.L.,Wong, D.W.,Murakami, M.T. Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family. Biochemistry 2015 54 1930 1942 4D7E 25802330 An unprecedented NADPH domain conformation in Lysine Monooxygenase NbtG from Nocardia farcinica 2014-11-24 2015-04-01 Binda, C.,Robinson, R.M.,Martin Del Campo, J.S.,Keul, N.D.,Rodriguez, P.J.,Robinson, H.H.,Mattevi, A.,Sobrado, P. An Unprecedented Nadph Domain Conformation in Lysine Monooxygenase Nbtg Provides Insights Into Uncoupling of Oxygen Consumption from Substrate Hydroxylation. J.Biol.Chem. 2015 290 12676 0 4WZH 25945707 Dihydroorotate dehydrogenase from Leishmania Viannia braziliensis 2014-11-19 2015-05-13 Reis, R.A.,Lorenzato, E.,Silva, V.C.,Nonato, M.C. Recombinant production, crystallization and crystal structure determination of dihydroorotate dehydrogenase from Leishmania (Viannia) braziliensis. Acta Crystallogr.,Sect.F 2015 71 547 552 4USC 25660651 Crystal structure of peroxidase from palm tree Chamaerops excelsa 2014-07-07 2015-05-27 Bernardes, A.,Textor, L.C.,Santos, J.C.,Cuadrado, N.H.,Kostetsky, E.Y.,Roig, M.G.,Bavro, V.N.,Muniz, J.R.C.,Shnyrov, V.L.,Polikarpov, I. Crystal Structure Analysis of Peroxidase from the Palm Tree Chamaerops Excelsa. Biochimie 2015 111 58 0 4RW3 25961401 Structural insights into substrate binding of brown spider venom class II phospholipases D 2014-12-01 2015-06-03 Coronado, M.A.,Ullah, A.,da Silva, L.S.,Chaves-Moreira, D.,Vuitika, L.,Chaim, O.M.,Veiga, S.S.,Chahine, J.,Murakami, M.T.,Arni, R.K. Structural Insights into Substrate Binding of Brown Spider Venom Class II Phospholipases D. Curr Protein Pept Sci 2015 16 768 774 4RW5 25961401 Structural insights into substrate binding of brown spider venom class II phospholipases D 2014-12-01 2015-06-03 Coronado, M.A.,Ullah, A.,da Silva, L.S.,Chaves-Moreira, D.,Vuitika, L.,Chaim, O.M.,Veiga, S.S.,Chahine, J.,Murakami, M.T.,Arni, R.K. Structural Insights into Substrate Binding of Brown Spider Venom Class II Phospholipases D. Curr Protein Pept Sci 2015 16 768 774 4Z9A 26117648 Crystal structure of Low Molecular Weight Protein Tyrosine Phosphatase isoform A complexed with phenylmethanesulfonic acid 2015-04-10 2015-07-15 Fonseca, E.M.,Trivella, D.B.,Scorsato, V.,Dias, M.P.,Bazzo, N.L.,Mandapati, K.R.,de Oliveira, F.L.,Ferreira-Halder, C.V.,Pilli, R.A.,Miranda, P.C.,Aparicio, R. Crystal structures of the apo form and a complex of human LMW-PTP with a phosphonic acid provide new evidence of a secondary site potentially related to the anchorage of natural substrates. Bioorg.Med.Chem. 2015 23 4462 4471 4TYS Crystal structure of Canavalia maritima lectin (ConM) complexed with a dinucleotide 2014-07-09 2015-07-22 Vieira, D.B.H.A.,Delatorre, P.,Cavada, B.S.,Silva-Filho, J.C.,Nobrega, R.B.,Teixeira, C.S.,Lima, E.M.,Rocha, B.A.M. Crystal structure of Canavalia maritima lectin (ConM) complexed with a dinucleotide To Be Published 0 0 0 0 4TZD Crystal structure of Canavalia maritima lectin (ConM) complexed with interleukin - 1 beta primer 2014-07-10 2015-07-22 Vieira, D.B.H.A.,Delatorre, P.,Cavada, B.S.,Nobrega, R.B.,Teixeira, C.S.,Silva-Filho, J.C.,Lima, E.M.,Rocha, B.A.M. Crystal structure of Canavalia maritima lectin (ConM) complexed with interleukin 1 - beta primer To Be Published 0 0 0 0 4YU7 26192963 Crystal structure of Piratoxin I (PrTX-I) complexed to caffeic acid 2015-03-18 2015-08-05 Fernandes, C.A.,Cardoso, F.F.,Cavalcante, W.G.,Soares, A.M.,Dal-Pai, M.,Gallacci, M.,Fontes, M.R. Structural Basis for the Inhibition of a Phospholipase A2-Like Toxin by Caffeic and Aristolochic Acids. Plos One 2015 10 0 0 4YZ7 26192963 Crystal structure of Piratoxin I (PrTX-I) complexed to aristolochic acid 2015-03-24 2015-08-05 Fernandes, C.A.,Cardoso, F.F.,Cavalcante, W.G.,Soares, A.M.,Dal-Pai, M.,Gallacci, M.,Fontes, M.R. Structural Basis for the Inhibition of a Phospholipase A2-Like Toxin by Caffeic and Aristolochic Acids. Plos One 2015 10 0 0 4WIG Crystal structure of E47D mutant cytidine deaminase from Mycobacterium tuberculosis (MtCDA E47D) 2014-09-25 2015-08-12 Sanchez-Quitian, Z.A.,Rodrigues-Junior, E.,Rehm, J.G.,Eichler, P.,Trivella, D.B.B.,Bizarro, C.V.,Basso, L.A.,Santos, D.S. Functional and structural evidence for the catalytic role played by glutamate-47 residue in the mode of action of Mycobacterium tuberculosis cytidine deaminase Rsc Adv 2015 5 830 840 4WIF Crystal structure of E47Q mutant cytidine deaminase from Mycobacterium tuberculosis (MtCDA E47Q) 2014-09-25 2015-09-09 Sanchez-Quitian, A.Z.,Rodrigues-Junior, V.,Rehm, J.G.,Eichler, P.,Trivella, D.B.B.,Bizarro, C.V.,Basso, L.A.,Santos, D.S. Crystal structure of E47Q mutant cytidine deaminase from Mycobacterium tuberculosis (MtCDA E47Q) Rsc Adv 2015 0 0 0 4YV5 26457430 Crystal Structure of Myotoxin II from Bothrops moojeni complexed to Suramin 2015-03-19 2015-10-14 Salvador, G.H.,Dreyer, T.R.,Cavalcante, W.L.,Matioli, F.F.,Dos Santos, J.I.,Velazquez-Campoy, A.,Gallacci, M.,Fontes, M.R. Structural and functional evidence for membrane docking and disruption sites on phospholipase A2-like proteins revealed by complexation with the inhibitor suramin. Acta Crystallogr. D Biol. Crys 2015 71 2066 2078 5C7P 26410384 Structure of Leishmania nucleoside diphostate kinase mutant P95S 2015-06-24 2015-10-14 Vieira, P.S.,de Giuseppe, P.O.,de Oliveira, A.H.,Murakami, M.T. The role of the C-terminus and Kpn loop in the quaternary structure stability of nucleoside diphosphate kinase from Leishmania parasites. J.Struct.Biol. 2015 192 336 341 5CAA 26410384 Structure of Leishmania nucleoside diphosphate kinase mutant P100S/del5-Cterm 2015-06-29 2015-10-14 Vieira, P.S.,de Giuseppe, P.O.,de Oliveira, A.H.,Murakami, M.T. The role of the C-terminus and Kpn loop in the quaternary structure stability of nucleoside diphosphate kinase from Leishmania parasites. J.Struct.Biol. 2015 192 336 341 5CAB 26410384 Structure of Leishmania nucleoside diphostate kinase mutant Del5-Cterm 2015-06-29 2015-10-14 Vieira, P.S.,de Giuseppe, P.O.,de Oliveira, A.H.,Murakami, M.T. The role of the C-terminus and Kpn loop in the quaternary structure stability of nucleoside diphosphate kinase from Leishmania parasites. J.Struct.Biol. 2015 192 336 341 4W7U Crystal structure of XacCel5A in the native form 2014-08-22 2015-10-21 Paiva, J.H.,Murakami, M.T. Crystal structure of XacCel5A in the native form To Be Published 0 0 0 0 4W7V Crystal structure of XacCel5A in complex with cellobiose 2014-08-22 2015-10-21 Paiva, J.H.,Murakami, M.T. Crystal structure of XacCel5A in complex with cellobiose To Be Published 0 0 0 0 4W7W High-resolution structure of XacCel5A in complex with cellopentaose 2014-08-22 2015-10-21 Paiva, J.H.,Murakami, M.T. High-resolution structure of XacCel5A in complex with cellopentaose To Be Published 0 0 0 0 4W8O Structure of the luciferase-like enzyme from the nonluminescent Zophobas morio mealworm 2014-08-25 2015-10-21 Santos, C.R.,Prado, R.A.,Viviani, V.,Murakami, M.T. Structure of the luciferase-like enzyme from the nonluminescent Zophobas morio mealworm To Be Published 0 0 0 0 4XUM 26445566 PPARgamma ligand binding domain in complex with indomethacin 2015-01-26 2015-11-04 Puhl, A.C.,Milton, F.A.,Cvoro, A.,Sieglaff, D.H.,Campos, J.C.,Bernardes, A.,Filgueira, C.S.,Lindemann, J.L.,Deng, T.,Neves, F.A.,Polikarpov, I.,Webb, P. Mechanisms of peroxisome proliferator activated receptor gamma regulation by non-steroidal anti-inflammatory drugs. Nucl Recept Signal 2015 13 0 0 4WTB 27531710 BthTX-I, a svPLA2s-like toxin, complexed with zinc ions 2014-10-29 2015-11-11 Borges, R.J.,Cardoso, F.F.,Fernandes, C.A.,Dreyer, T.R.,de Moraes, D.S.,Floriano, R.S.,Rodrigues-Simioni, L.,Fontes, M.R. Functional and structural studies of a Phospholipase A2-like protein complexed to zinc ions: Insights on its myotoxicity and inhibition mechanism. Biochim. Biophys. Acta 2017 1861 3199 3209 4XTA 26445566 MECHANISMS OF PPARgamma ACTIVATION BY NON-STEROIDAL ANTI-INFLAMMATORY DRUGS 2015-01-23 2015-11-11 Puhl, A.C.,Milton, F.A.,Cvoro, A.,Sieglaff, D.H.,Campos, J.C.,Bernardes, A.,Filgueira, C.S.,Lindemann, J.L.,Deng, T.,Neves, F.A.,Polikarpov, I.,Webb, P. Mechanisms of peroxisome proliferator activated receptor gamma regulation by non-steroidal anti-inflammatory drugs. Nucl Recept Signal 2015 13 0 0 5DOM 26505799 Crystal structure, maturation and flocculating properties of a 2S albumin from Moringa oleifera seeds 2015-09-11 2015-11-11 Ullah, A.,Mariutti, R.B.,Masood, R.,Caruso, I.P.,Gravatim Costa, G.H.,Millena de Freita, C.,Santos, C.R.,Zanphorlin, L.M.,Rossini Mutton, M.J.,Murakami, M.T.,Arni, R.K. Crystal structure of mature 2S albumin from Moringa oleifera seeds. Biochem.Biophys.Res.Commun. 2015 468 365 371 5BYN Canavalia maritima lectin complexed with synthetic selenoamino acid 2015-06-10 2015-11-18 Nobrega, R.B.,Silva-Filho, J.C.,Kawasoko, C.Y.,Rodrigues, O.E.D.,Schwab, R.S.,Braga, A.L.,Delatorre, P.,Cavada, B.S. Canavalia maritima lectin complexed with synthetic selenoamino acid To Be Published 0 0 0 0 5AN6 26663887 Crystal structure of Thermotoga maritima Csm2 2015-09-04 2015-12-23 Gallo, G.,Augusto, G.,Rangel, G.,Zelanis, A.,Mori, M.A.,Campos, C.B.,Wurtele, M. Structural Basis for Dimer Formation of the Crispr-Associated Protein Csm2 of Thermotoga Maritima. FEBS J. 2016 283 694 0 5EXP 26712005 AAA+ domain of FleQ from Pseudomonas aeruginosa 2015-11-24 2016-01-13 Matsuyama, B.Y.,Krasteva, P.V.,Baraquet, C.,Harwood, C.S.,Sondermann, H.,Navarro, M.V. Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa. Proc.Natl.Acad.Sci.USA 2016 113 0 0 5EXT 26712005 AAA+ domain of FleQ from Pseudomonas aeruginosa bound to ADP 2015-11-24 2016-01-13 Matsuyama, B.Y.,Krasteva, P.V.,Baraquet, C.,Harwood, C.S.,Sondermann, H.,Navarro, M.V. Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa. Proc.Natl.Acad.Sci.USA 2016 113 0 0 5DYR Structure of virulence-associated protein D (VapD) from Xylella fastidiosa 2015-09-25 2016-01-27 Kochneva, M.V.,dos Santos, M.L.,dos Santos, C.A.,de Souza, A.P.,Polikarpov, I.,Aparicio, R.,Golubev, A.M. Structure of virulence-associated protein D (VapD) from Xylella fastidiosa To Be Published 0 0 0 0 5EKG 26812207 Crystallization and X-ray Diffraction Data Collection of Importin-alpha from Mus musculus Complexed with a XPG NLS Peptide, fragment 2 2015-11-03 2016-02-10 Barros, A.C.,Takeda, A.A.,Dreyer, T.R.,Velazquez-Campoy, A.,Kobe, B.,Fontes, M.R. Structural and Calorimetric Studies Demonstrate that Xeroderma Pigmentosum Type G (XPG) Can Be Imported to the Nucleus by a Classical Nuclear Import Pathway via a Monopartite NLS Sequence. J.Mol.Biol. 2016 428 2120 2131 5CYF 26898674 Crystal structure of isoform 2 of uridine phosphorylase from Schistosoma mansoni in complex with citrate 2015-07-30 2016-03-16 da Silva Neto, A.M.,Torini de Souza, J.R.,Romanello, L.,Cassago, A.,Serrao, V.H.,DeMarco, R.,Brandao-Neto, J.,Garratt, R.C.,Pereira, H.D. Analysis of two Schistosoma mansoni uridine phosphorylases isoforms suggests the emergence of a protein with a non-canonical function. Biochimie 2016 125 12 22 5DT7 27029646 Crystal structure of the GH1 beta-glucosidase from Exiguobacterium antarcticum B7 in space group C2221 2015-09-17 2016-04-13 Zanphorlin, L.M.,de Giuseppe, P.O.,Honorato, R.V.,Tonoli, C.C.,Fattori, J.,Crespim, E.,de Oliveira, P.S.,Ruller, R.,Murakami, M.T. Oligomerization as a strategy for cold adaptation: Structure and dynamics of the GH1 beta-glucosidase from Exiguobacterium antarcticum B7. Sci Rep 2016 6 23776 23776 5C2Z 26299923 Molecular insights into the specificity of exfoliative toxins from Staphylococcus aureus 2015-06-16 2016-04-27 Mariutti, R.B.,Souza, T.A.,Ullah, A.,Caruso, I.P.,de Moraes, F.R.,Zanphorlin, L.M.,Tartaglia, N.R.,Seyffert, N.,Azevedo, V.A.,Le Loir, Y.,Murakami, M.T.,Arni, R.K. Crystal structure of Staphylococcus aureus exfoliative toxin D-like protein: Structural basis for the high specificity of exfoliative toxins. Biochem.Biophys.Res.Commun. 2015 467 171 177 5D2J 27082660 4-oxalocrotonate decarboxylase from Pseudomonas putida G7 - complexed with magnesium and adipate 2015-08-05 2016-05-04 Guimaraes, S.L.,Coitinho, J.B.,Costa, D.M.,Araujo, S.S.,Whitman, C.P.,Nagem, R.A. Crystal Structures of Apo and Liganded 4-Oxalocrotonate Decarboxylase Uncover a Structural Basis for the Metal-Assisted Decarboxylation of a Vinylogous beta-Keto Acid. Biochemistry 2016 55 2632 2645 5D2K 27082660 4-oxalocrotonate decarboxylase from Pseudomonas putida G7 - complexed with magnesium and 2-oxoadipate 2015-08-05 2016-05-04 Guimaraes, S.L.,Coitinho, J.B.,Costa, D.M.,Araujo, S.S.,Whitman, C.P.,Nagem, R.A. Crystal Structures of Apo and Liganded 4-Oxalocrotonate Decarboxylase Uncover a Structural Basis for the Metal-Assisted Decarboxylation of a Vinylogous beta-Keto Acid. Biochemistry 2016 55 2632 2645 5I84 Structure of the Xanthomonas citri phosphate-binding protein PhoX 2016-02-18 2016-06-15 Pegos, V.R.,Santos, R.M.L.,Medrano, F.J.,Balan, A. A gene duplication in phosphate-binding proteins from pho regulon of Xanthomonas citri: functional and structural studies To Be Published 0 0 0 0 5BWF Crystal structure of the beta-glucosidase from Trichoderma harzianum 2015-06-07 2016-07-06 Santos, C.A.,Zanphorlin, L.M.,Crucello, A.,Tonoli, C.C.C.,Ruller, R.,Souza, A.P.,Murakami, M.T. Crystal structure of the beta-glucosidase from Trichoderma harzianum To Be Published 0 0 0 0 5CZL Crystal structure of a novel GH8 endo-beta-1,4-glucanase from an Achatina fulica gut metagenomic library 2015-07-31 2016-08-03 Scapin, S.M.N.,Souza, F.H.M.,Zanphorlin, L.M.,Almeida, T.,Pinheiro, G.L.,Murakami, M.T. Crystal structure of a novel GH8 endo-beta-1,4-glucanase from an Achatina fulica gut metagenomic library To Be Published 0 0 0 0 5D6B 24419633 Human fumarase (wild type) 2015-08-11 2016-08-24 Pereira de Padua, R.A.,Nonato, M.C. Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of recombinant human fumarase. Acta Crystallogr F Struct Biol 2014 70 120 122 5JVO 27233609 Crystal structure of the Arginine Repressor from the pathogenic bacterium Corynebacterium pseudotuberculosis 2016-05-11 2016-08-31 Mariutti, R.B.,Ullah, A.,Araujo, G.C.,Murakami, M.T.,Arni, R.K. Tyrosine binding and promiscuity in the arginine repressor from the pathogenic bacterium Corynebacterium pseudotuberculosis. Biochem.Biophys.Res.Commun. 2016 475 350 355 5DAE 28777090 Kazal type inhibitor from salivary glands of Aedes aegypti mosquito 2015-08-19 2016-09-07 Torquato, R.J.S.,Lu, S.,Martins, N.H.,Tanaka, A.S.,Pereira, P.J.B. High-resolution structure of a Kazal-type serine protease inhibitor from the dengue vector Aedes aegypti. Acta Crystallogr F Struct Biol 2017 73 469 475 5SV2 27576202 Toxin VapC21 from Mycobacterium tuberculosis 2016-08-04 2016-09-14 Jardim, P.,Santos, I.C.,Barbosa, J.A.R.G.,de Freitas, S.M.,Valadares, N.F. Crystal structure of VapC21 from Mycobacterium tuberculosis at 1.31 angstrom resolution. Biochem.Biophys.Res.Commun. 2016 478 1370 1375 5KLC 27621314 Structure of CBM_E1, a novel carbohydrate-binding module found by sugar cane soil metagenome 2016-06-24 2016-09-21 Campos, B.M.,Liberato, M.V.,Alvarez, T.M.,Zanphorlin, L.M.,Ematsu, G.C.,Barud, H.,Polikarpov, I.,Ruller, R.,Gilbert, H.J.,Zeri, A.C.,Squina, F.M. A Novel Carbohydrate-binding Module from Sugar Cane Soil Metagenome Featuring Unique Structural and Carbohydrate Affinity Properties. J.Biol.Chem. 2016 291 23734 23743 5KLE 27621314 Structure of CBM_E1, a novel carbohydrate-binding module found by sugar cane soil metagenome, complexed with cellopentaose 2016-06-24 2016-09-21 Campos, B.M.,Liberato, M.V.,Alvarez, T.M.,Zanphorlin, L.M.,Ematsu, G.C.,Barud, H.,Polikarpov, I.,Ruller, R.,Gilbert, H.J.,Zeri, A.C.,Squina, F.M. A Novel Carbohydrate-binding Module from Sugar Cane Soil Metagenome Featuring Unique Structural and Carbohydrate Affinity Properties. J.Biol.Chem. 2016 291 23734 23743 5KLF 27621314 Structure of CBM_E1, a novel carbohydrate-binding module found by sugar cane soil metagenome, complexed with cellopentaose and gadolinium ion 2016-06-24 2016-09-21 Campos, B.M.,Liberato, M.V.,Alvarez, T.M.,Zanphorlin, L.M.,Ematsu, G.C.,Barud, H.,Polikarpov, I.,Ruller, R.,Gilbert, H.J.,Zeri, A.C.,Squina, F.M. A Novel Carbohydrate-binding Module from Sugar Cane Soil Metagenome Featuring Unique Structural and Carbohydrate Affinity Properties. J.Biol.Chem. 2016 291 23734 23743 5K9C 27994748 Crystal structure of human dihydroorotate dehydrogenase with ML390 2016-05-31 2016-10-12 Lewis, T.A.,Sykes, D.B.,Law, J.M.,Munoz, B.,Rustiguel, J.K.,Nonato, M.C.,Scadden, D.T.,Schreiber, S.L. Development of ML390: A Human DHODH Inhibitor That Induces Differentiation in Acute Myeloid Leukemia. ACS Med Chem Lett 2016 7 1112 1117 5K9D 27994748 Crystal structure of human dihydroorotate dehydrogenase at 1.7 A resolution 2016-05-31 2016-10-12 Lewis, T.A.,Sykes, D.B.,Law, J.M.,Munoz, B.,Rustiguel, J.K.,Nonato, M.C.,Scadden, D.T.,Schreiber, S.L. Development of ML390: A Human DHODH Inhibitor That Induces Differentiation in Acute Myeloid Leukemia. ACS Med Chem Lett 2016 7 1112 1117 5F5Q 27737777 Crystal structure of Canavalia virosa lectin in complex with alpha-methyl-mannoside 2015-12-04 2016-10-26 Osterne, V.J.,Silva-Filho, J.C.,Santiago, M.Q.,Pinto-Junior, V.R.,Almeida, A.C.,Barreto, A.A.,Wolin, I.A.,Nascimento, A.P.,Amorim, R.M.,Rocha, B.A.,Delatorre, P.,Nagano, C.S.,Leal, R.B.,Assreuy, A.M.,Nascimento, K.S.,Cavada, B.S. Structural characterization of a lectin from Canavalia virosa seeds with inflammatory and cytotoxic activities. Int.J.Biol.Macromol. 2016 94 271 282 5TE0 Crystal Structure of Adaptor Protein 2 Associated Kinase (AAK1) in complex with BIBF 1120 2016-09-20 2016-11-02 Counago, R.M.,Elkins, J.M.,Arrowsmith, C.H.,Bountra, C.,Arruda, P.,Edwards, A.M.,Gileadi, O. Crystal Structure of Adaptor Protein 2 Associated Kinase (AAK1) in complex with BIBF 1120 To Be Published 0 0 0 0 5JH1 27154221 Crystal structure of the apo form of AKR4C7 from maize 2016-04-20 2016-11-09 Giuseppe, P.O.,Santos, M.L.,Sousa, S.M.,Koch, K.E.,Yunes, J.A.,Aparicio, R.,Murakami, M.T. A comparative structural analysis reveals distinctive features of co-factor binding and substrate specificity in plant aldo-keto reductases. Biochem.Biophys.Res.Commun. 2016 474 696 701 5JH2 27154221 Crystal structure of the holo form of AKR4C7 from maize 2016-04-20 2016-11-09 Giuseppe, P.O.,Santos, M.L.,Sousa, S.M.,Koch, K.E.,Yunes, J.A.,Aparicio, R.,Murakami, M.T. A comparative structural analysis reveals distinctive features of co-factor binding and substrate specificity in plant aldo-keto reductases. Biochem.Biophys.Res.Commun. 2016 474 696 701 5F2Q C-type lectin from Bothrops jararacussu 2015-12-02 2016-12-07 de Padua, R.A.P.,Pinheiro, M.P.,Sartim, M.A.,Vilela, S.S.,Nonato, M.C. C-type lectin from Bothrops jararacussu To Be Published 0 0 0 0 5TSQ Crystal structure of IUnH from Leishmania braziliensis in complex with D-Ribose 2016-10-31 2016-12-14 Bachega, J.F.R.,Timmers, L.F.S.M.,Dalberto, P.F.,Martinelli, L.,Pinto, A.F.M.,Basso, L.A.,Norberto de Souza, O.,Santos, D.S. Crystal structure of IUnH from Leishmania braziliensis in complex with D-Ribose To Be Published 0 0 0 0 5KET 28053664 Structure of the aldo-keto reductase from Coptotermes gestroi 2016-06-10 2017-01-18 Tramontina, R.,Franco Cairo, J.P.,Liberato, M.V.,Mandelli, F.,Sousa, A.,Santos, S.,Rabelo, S.C.,Campos, B.,Ienczak, J.,Ruller, R.,Damasio, A.R.,Squina, F.M. The Coptotermes gestroi aldo-keto reductase: a multipurpose enzyme for biorefinery applications. Biotechnol Biofuels 2017 10 4 4 5HNN Crystal structure of the endo-beta-1,4-glucanase (Xac0030) from Xanthomonas axonopodis pv. citri with the triple mutation His174Trp, Tyr211Ala and Lys227Arg. 2016-01-18 2017-01-25 Paiva, J.H.,Murakami, M.T. Crystal structure of the endo-beta-1,4-glucanase (Xac0030) from Xanthomonas axonopodis pv. citri with the triple mutation His174Trp, Tyr211Ala and Lys227Arg. To Be Published 0 0 0 0 5HOS Crystal structure of the endo-beta-1,4-glucanase Xac0029 from Xanthomonas axonopodis pv. citri 2016-01-19 2017-01-25 Paiva, J.H.,Murakami, M.T. Crystal structure of the endo-beta-1,4-glucanase Xac0029 from Xanthomonas axonopodis pv. citri To Be Published 0 0 0 0 5HPC Structure of XacCel5A crystallized in the space group P41212 2016-01-20 2017-01-25 Paiva, J.H.,Murakami, M.T. Structure of XacCel5A crystallized in the space group P41212 To Be Published 0 0 0 0 5TG3 28130130 Crystal Structure of Dioclea reflexa seed lectin (DrfL) in complex with X-Man 2016-09-27 2017-02-15 Pinto-Junior, V.R.,Osterne, V.J.,Santiago, M.Q.,Correia, J.L.,Pereira-Junior, F.N.,Leal, R.B.,Pereira, M.G.,Chicas, L.S.,Nagano, C.S.,Rocha, B.A.,Silva-Filho, J.C.,Ferreira, W.P.,Rocha, C.R.,Nascimento, K.S.,Assreuy, A.M.,Cavada, B.S. Structural studies of a vasorelaxant lectin from Dioclea reflexa Hook seeds: Crystal structure, molecular docking and dynamics. Int. J. Biol. Macromol. 2017 98 12 23 5U04 28345596 Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase 2016-11-22 2017-02-22 Godoy, A.S.,Lima, G.M.,Oliveira, K.I.,Torres, N.U.,Maluf, F.V.,Guido, R.V.,Oliva, G. Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase. Nat Commun 2017 8 14764 14764 5UU1 28790404 Crystal Structure of Human Vaccinia-related kinase 2 (VRK-2) bound to BI-D1870 2017-02-15 2017-03-01 Counago, R.M.,Allerston, C.K.,Savitsky, P.,Azevedo, H.,Godoi, P.H.,Wells, C.I.,Mascarello, A.,de Souza Gama, F.H.,Massirer, K.B.,Zuercher, W.J.,Guimaraes, C.R.W.,Gileadi, O. Structural characterization of human Vaccinia-Related Kinases (VRK) bound to small-molecule inhibitors identifies different P-loop conformations. Sci Rep 2017 7 7501 7501 5J7N 28368281 Crystal structure of a small heat-shock protein from Xylella fastidiosa reveals a distinct high order structure 2016-04-06 2017-04-12 Fonseca, E.M.,Scorsato, V.,Dos Santos, M.L.,Junior, A.T.,Tada, S.F.,Dos Santos, C.A.,de Toledo, M.A.,de Souza, A.P.,Polikarpov, I.,Aparicio, R. Crystal structure of a small heat-shock protein from Xylella fastidiosa reveals a distinct high-order structure. Acta Crystallogr F Struct Biol 2017 73 222 227 5K9Y 28109807 Crystal structure of a thermophilic xylanase A from Bacillus subtilis 1A1 quadruple mutant Q7H/G13R/S22P/S179C 2016-06-01 2017-04-12 Silva, S.B.,Pinheiro, M.P.,Fuzo, C.A.,Silva, S.R.,Ferreira, T.L.,Lourenzoni, M.R.,Nonato, M.C.,Vieira, D.S.,Ward, R.J. The role of local residue environmental changes in thermostable mutants of the GH11 xylanase from Bacillus subtilis. Int. J. Biol. Macromol. 2017 97 574 584 5JY5 Crystal structure of Thioredoxin 1 from Cryptococcus neoformans at 1.8 Angstroms resolution 2016-05-13 2017-06-07 Bravo-Chaucanes, C.P.,Abadio, A.K.R.,Kioshima, E.S.,Felipe, M.S.S.,Barbosa, J.A.R.G. Crystal structure of Thioredoxin 1 from Cryptococcus neoformans at 1.8 Angstroms resolution To Be Published 0 0 0 0 5KB5 Crystal structure of the adenosine kinase from Mus musculus in complex with adenosine and adenosine-diphosphate 2016-06-02 2017-06-07 Oliveira, R.R.,Neto, R.M.,Polo, C.C.,Tonoli, C.C.C.,Murakami, M.T.,Franchini, K.G. Crystal structure of the adenosine kinase from Mus musculus in complex with adenosine and adenosine-diphosphate To Be Published 0 0 0 0 5KB6 High-resolution structure of the adenosine kinase from Mus musculus in complex with adenosine 2016-06-02 2017-06-07 Oliveira, R.R.,Neto, R.M.,Polo, C.C.,Tonoli, C.C.C.,Murakami, M.T.,Franchini, K.G. High-resolution structure of the adenosine kinase from Mus musculus in complex with adenosine To Be Published 0 0 0 0 5TOA 28615710 Crystal Structure of ER beta bound to Estradiol 2016-10-17 2017-06-28 Souza, P.C.T.,Textor, L.C.,Melo, D.C.,Nascimento, A.S.,Skaf, M.S.,Polikarpov, I. An alternative conformation of ER beta bound to estradiol reveals H12 in a stable antagonist position. Sci Rep 2017 7 3509 3509 5W10 28601495 Lcd1 GAF domain in complex with cAMP ligand 2017-06-01 2017-06-28 da Costa Vasconcelos, F.N.,Maciel, N.K.,Favaro, D.C.,de Oliveira, L.C.,Barbosa, A.S.,Salinas, R.K.,de Souza, R.F.,Farah, C.S.,Guzzo, C.R. Structural and Enzymatic Characterization of a cAMP-Dependent Diguanylate Cyclase from Pathogenic Leptospira Species. J. Mol. Biol. 2017 429 2337 2352 5KSQ 28677327 Stationary phase survival protein E (SurE) from Xylella fastidiosa 2016-07-09 2017-07-19 Machado, A.T.P.,Fonseca, E.M.B.,Reis, M.A.D.,Saraiva, A.M.,Santos, C.A.D.,de Toledo, M.A.S.,Polikarpov, I.,de Souza, A.P.,Aparicio, R.,Iulek, J. Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis. Proteins 2017 85 1931 1943 5KSR 28677327 Stationary phase survival protein E (SurE) from Xylella fastidiosa - XFSurE-TB (Tetramer Bigger). 2016-07-09 2017-07-19 Machado, A.T.P.,Fonseca, E.M.B.,Reis, M.A.D.,Saraiva, A.M.,Santos, C.A.D.,de Toledo, M.A.S.,Polikarpov, I.,de Souza, A.P.,Aparicio, R.,Iulek, J. Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis. Proteins 2017 85 1931 1943 5KST 28677327 Stationary phase Survival protein E (SurE) from Xylella fastidiosa- XfSurE-TSAmp (Tetramer Smaller - crystallization with 3'AMP). 2016-07-09 2017-07-19 Machado, A.T.P.,Fonseca, E.M.B.,Reis, M.A.D.,Saraiva, A.M.,Santos, C.A.D.,de Toledo, M.A.S.,Polikarpov, I.,de Souza, A.P.,Aparicio, R.,Iulek, J. Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis. Proteins 2017 85 1931 1943 5U50 Crystal structure of citrus MAF1 in space group C 2 2 21 2016-12-06 2017-07-19 Soprano, A.S.,Giuseppe, P.O.,Nascimento, A.F.Z.,Benedetti, C.E.,Murakami, M.T. Crystal structure of citrus MAF1 in space group C 2 2 21 To Be Published 0 0 0 0 5JBK 28888962 Trichoderma harzianum GH1 beta-glucosidase ThBgl1 2016-04-13 2017-08-09 Florindo, R.N.,Souza, V.P.,Mutti, H.S.,Camilo, C.,Manzine, L.R.,Marana, S.R.,Polikarpov, I.,Nascimento, A.S. Structural insights into beta-glucosidase transglycosylation based on biochemical, structural and computational analysis of two GH1 enzymes from Trichoderma harzianum. N Biotechnol 2018 40 218 227 5T7P 28754321 Crystal structure of Pisum arvense lectin (PAL) complexed with X-Man 2016-09-05 2017-08-09 Pinto-Junior, V.R.,Santiago, M.Q.,Nobre, C.B.,Osterne, V.J.S.,Leal, R.B.,Cajazeiras, J.B.,Lossio, C.F.,Rocha, B.A.M.,Martins, M.G.Q.,Nobre, C.A.S.,Silva, M.T.L.,Nascimento, K.S.,Cavada, B.S. Crystal structure of Pisum arvense seed lectin (PAL) and characterization of its interaction with carbohydrates by molecular docking and dynamics. Arch. Biochem. Biophys. 2017 630 27 37 5U3E 28803976 Crystal Structure of Native Lectin from Canavalia bonariensis Seeds (CaBo) complexed with alpha-methyl-D-mannoside 2016-12-02 2017-08-23 Cavada, B.S.,Silva, M.T.L.,Osterne, V.J.S.,Pinto-Junior, V.R.,Nascimento, A.P.M.,Wolin, I.A.V.,Heinrich, I.A.,Nobre, C.A.S.,Moreira, C.G.,Lossio, C.F.,Rocha, C.R.C.,Martins, J.L.,Nascimento, K.S.,Leal, R.B. Canavalia bonariensis lectin: Molecular bases of glycoconjugates interaction and antiglioma potential. Int. J. Biol. Macromol. 2018 106 369 378 5UBJ 28890404 Structure of an alpha-L-arabinofuranosidase (GH62) from Aspergillus nidulans 2016-12-20 2017-09-27 Contesini, F.J.,Liberato, M.V.,Rubio, M.V.,Calzado, F.,Zubieta, M.P.,Riano-Pachon, D.M.,Squina, F.M.,Bracht, F.,Skaf, M.S.,Damasio, A.R. Structural and functional characterization of a highly secreted alpha-l-arabinofuranosidase (GH62) from Aspergillus nidulans grown on sugarcane bagasse. Biochim. Biophys. Acta 2017 1865 1758 1769 5U38 28867234 Crystal structure of native lectin from Platypodium elegans seeds (PELa) complexed with Man1-3Man-OMe. 2016-12-01 2017-10-04 Cavada, B.S.,Araripe, D.A.,Silva, I.B.,Pinto-Junior, V.R.,Osterne, V.J.S.,Neco, A.H.B.,Laranjeira, E.P.P.,Lossio, C.F.,Correia, J.L.A.,Pires, A.F.,Assreuy, A.M.S.,Nascimento, K.S. Structural studies and nociceptive activity of a native lectin from Platypodium elegans seeds (nPELa). Int. J. Biol. Macromol. 2018 107 236 246 5UUY 28939357 Crystal structure of Dioclea lasiocarpa lectin (DLL) complexed with X-MAN 2017-02-17 2017-10-04 Nascimento, K.S.,Santiago, M.Q.,Pinto-Junior, V.R.,Osterne, V.J.S.,Martins, F.W.V.,Nascimento, A.P.M.,Wolin, I.A.V.,Heinrich, I.A.,Martins, M.G.Q.,Silva, M.T.L.,Lossio, C.F.,Rocha, C.R.C.,Leal, R.B.,Cavada, B.S. Structural analysis of Dioclea lasiocarpa lectin: A C6 cells apoptosis-inducing protein. Int. J. Biochem. Cell Biol. 2017 92 79 89 5U0N 28876898 Crystal structure of a methyltransferase in complex with the substrate involved in the biosynthesis of gentamicin 2016-11-25 2017-11-01 Bury, P.D.S.,Huang, F.,Li, S.,Sun, Y.,Leadlay, P.F.,Dias, M.V.B. Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis. ACS Chem. Biol. 2017 12 2779 2787 5U0T 28876898 Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with (1R,2S,3S,4R,6S)-4,6-diamino-3-{[3-deoxy-3-(methylamino)-alpha-D-glucopyranosyl]oxy}-2-hydroxycyclohexyl 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranoside 2016-11-27 2017-11-01 Bury, P.D.S.,Huang, F.,Li, S.,Sun, Y.,Leadlay, P.F.,Dias, M.V.B. Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis. ACS Chem. Biol. 2017 12 2779 2787 5U1E 28876898 Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with the kanamycin B 2016-11-28 2017-11-01 Bury, P.D.S.,Huang, F.,Li, S.,Sun, Y.,Leadlay, P.F.,Dias, M.V.B. Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis. ACS Chem. Biol. 2017 12 2779 2787 5U1I 28876898 Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with the methylated Kanamycin B 2016-11-28 2017-11-01 Bury, P.D.S.,Huang, F.,Li, S.,Sun, Y.,Leadlay, P.F.,Dias, M.V.B. Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis. ACS Chem. Biol. 2017 12 2779 2787 5VQI 29054975 Nuclear transport of the Neurospora crassa NIT2 transcription factor is mediated by Importin-alpha 2017-05-09 2017-11-01 Bernardes, N.E.,Takeda, A.A.S.,Dreyer, T.R.,Cupertino, F.B.,Virgilio, S.,Pante, N.,Bertolini, M.C.,Fontes, M.R.M. Nuclear transport of the Neurospora crassa NIT-2 transcription factor is mediated by importin-alpha. Biochem. J. 2017 474 4091 4104 5W11 29222836 Biochemical and structural insights into the catalytic mechanism of thermostable cellobiohydrolase Cel7A from industrially relevant fungus Myceliophthora thermophila 2017-06-01 2017-12-13 Kadowaki, M.A.S.,Higasi, P.,de Godoy, M.O.,Prade, R.A.,Polikarpov, I. Biochemical and structural insights into a thermostable cellobiohydrolase from Myceliophthora thermophila. FEBS J. 2018 285 559 579 5VFJ 28751219 Crystal structure of BnSP-7 from bothrops pauloensis complexed with caffeic acid 2017-04-07 2017-12-20 de Lima, L.F.G.,Borges, R.J.,Viviescas, M.A.,Fernandes, C.A.H.,Fontes, M.R.M. Structural studies with BnSP-7 reveal an atypical oligomeric conformation compared to phospholipases A2-like toxins. Biochimie 2017 142 11 21 5VFM 28751219 Crystal structure of BnSP-7 from Bothrops pauloensis complexed with p-coumaric acid 2017-04-08 2017-12-20 de Lima, L.F.G.,Borges, R.J.,Viviescas, M.A.,Fernandes, C.A.H.,Fontes, M.R.M. Structural studies with BnSP-7 reveal an atypical oligomeric conformation compared to phospholipases A2-like toxins. Biochimie 2017 142 11 21 5VFH 28751219 Crystal structure of BnSP-7 from Bothrops pauloensis complexed to sulfates 2017-04-07 2017-12-27 de Lima, L.F.G.,Borges, R.J.,Viviescas, M.A.,Fernandes, C.A.H.,Fontes, M.R.M. Structural studies with BnSP-7 reveal an atypical oligomeric conformation compared to phospholipases A2-like toxins. Biochimie 2017 142 11 21 5VFN 28751219 Crystal structure of BnSP-7 from Bothrops pauloensis complexed with cinnamic acid 2017-04-08 2017-12-27 de Lima, L.F.G.,Borges, R.J.,Viviescas, M.A.,Fernandes, C.A.H.,Fontes, M.R.M. Structural studies with BnSP-7 reveal an atypical oligomeric conformation compared to phospholipases A2-like toxins. Biochimie 2017 142 11 21 5UB3 29728456 XAC2383 from Xanthomonas citri bound to chloride ion 2016-12-20 2018-01-10 Teixeira, R.D.,Guzzo, C.R.,Arevalo, S.J.,Andrade, M.O.,Abrahao, J.,de Souza, R.F.,Farah, C.S. A bipartite periplasmic receptor-diguanylate cyclase pair (XAC2383-XAC2382) in the bacteriumXanthomonas citri. J. Biol. Chem. 2018 293 10767 10781 5UVD 31108423 Crystal structure of an antigenic nucleotidyltransferase-like protein from Paracoccidioides brasiliensis 2017-02-20 2018-01-31 Coitinho, J.B.,Costa, M.A.F.,Melo, E.M.,Morais, E.A.,de Andrade, L.G.A.,da Rocha, A.M.,de Magalhaes, M.T.Q.,Favaro, D.C.,Bleicher, L.,Pedroso, E.R.P.,Goes, A.M.,Nagem, R.A.P. Structural and immunological characterization of a new nucleotidyltransferase-like antigen from Paracoccidioides brasiliensis. Mol.Immunol. 2019 112 151 162 5UVD 31108423 Crystal structure of an antigenic nucleotidyltransferase-like protein from Paracoccidioides brasiliensis 2017-02-20 2018-01-31 Coitinho, J.B.,Costa, M.A.F.,Melo, E.M.,Morais, E.A.,de Andrade, L.G.A.,da Rocha, A.M.,de Magalhaes, M.T.Q.,Favaro, D.C.,Bleicher, L.,Pedroso, E.R.P.,Goes, A.M.,Nagem, R.A.P. Structural and immunological characterization of a new nucleotidyltransferase-like antigen from Paracoccidioides brasiliensis. Mol.Immunol. 2019 112 151 162 6C8Z 29997580 Last common ancestor of ADP-dependent phosphofructokinases from Methanosarcinales 2018-01-25 2018-02-07 Gonzalez-Ordenes, F.,Cea, P.A.,Fuentes-Ugarte, N.,Munoz, S.M.,Zamora, R.A.,Leonardo, D.,Garratt, R.C.,Castro-Fernandez, V.,Guixe, V. ADP-Dependent Kinases From the Archaeal OrderMethanosarcinalesAdapt to Salt by a Non-canonical Evolutionarily Conserved Strategy. Front Microbiol 2018 9 1305 1305 6AN1 29449830 Crystal structure of the complex between PPARgamma LBD and the ligand AM-879 2017-08-11 2018-02-14 Ribeiro Filho, H.V.,Bernardi Videira, N.,Bridi, A.V.,Tittanegro, T.H.,Helena Batista, F.A.,de Carvalho Pereira, J.G.,de Oliveira, P.S.L.,Bajgelman, M.C.,Le Maire, A.,Figueira, A.C.M. Screening for PPAR Non-Agonist Ligands Followed by Characterization of a Hit, AM-879, with Additional No-Adipogenic and cdk5-Mediated Phosphorylation Inhibition Properties. Front Endocrinol (Lausanne) 2018 9 11 11 5WKA 29454992 Crystal structure of a GH1 beta-glucosidase retrieved from microbial metagenome of Poraque Amazon lake 2017-07-24 2018-03-07 Toyama, D.,de Morais, M.A.B.,Ramos, F.C.,Zanphorlin, L.M.,Tonoli, C.C.C.,Balula, A.F.,de Miranda, F.P.,Almeida, V.M.,Marana, S.R.,Ruller, R.,Murakami, M.T.,Henrique-Silva, F. A novel beta-glucosidase isolated from the microbial metagenome of Lake Poraque (Amazon, Brazil). Biochim. Biophys. Acta 2018 1866 569 579 6CJ9 29559315 Crystal structure of lectin from Dioclea lasiophylla seeds (DlyL) complexed with X-Man 2018-02-26 2018-03-07 Leal, R.B.,Pinto-Junior, V.R.,Osterne, V.J.S.,Wolin, I.A.V.,Nascimento, A.P.M.,Neco, A.H.B.,Araripe, D.A.,Welter, P.G.,Neto, C.C.,Correia, J.L.A.,Rocha, C.R.C.,Nascimento, K.S.,Cavada, B.S. Crystal structure of DlyL, a mannose-specific lectin from Dioclea lasiophylla Mart. Ex Benth seeds that display cytotoxic effects against C6 glioma cells. Int. J. Biol. Macromol. 2018 114 64 76 5U5P 29175432 Crystal Structure and X-ray Diffraction Data Collection of Importin-alpha from Mus Musculus Complexed with a MLH1 NLS Peptide 2016-12-07 2018-03-14 de Barros, A.C.,Takeda, A.A.S.,Dreyer, T.R.,Velazquez-Campoy, A.,Kobe, B.,Fontes, M.R.M. DNA mismatch repair proteins MLH1 and PMS2 can be imported to the nucleus by a classical nuclear import pathway. Biochimie 2018 146 87 96 5U5R 29175432 Crystal Structure and X-ray Diffraction Data Collection of Importin-alpha from Mus musculus Complexed with a PMS2 NLS Peptide 2016-12-07 2018-03-14 de Barros, A.C.,Takeda, A.A.S.,Dreyer, T.R.,Velazquez-Campoy, A.,Kobe, B.,Fontes, M.R.M. DNA mismatch repair proteins MLH1 and PMS2 can be imported to the nucleus by a classical nuclear import pathway. Biochimie 2018 146 87 96 5UR0 29501559 Crystallographic structure of glyceraldehyde-3-phosphate dehydrogenase from Naegleria gruberi 2017-02-09 2018-03-14 Machado, A.T.P.,Silva, M.,Iulek, J. Structural studies of glyceraldehyde-3-phosphate dehydrogenase from Naegleria gruberi, the first one from phylum Percolozoa. Biochim. Biophys. Acta 2018 1866 581 588 5VQJ 29118851 Discovery of a first GH11 exo-1,4-beta-xylanase from a diverse microbial sugar cane bagasse composting community 2017-05-09 2018-03-21 Mello, B.L.,Alessi, A.M.,Riano-Pachon, D.M.,deAzevedo, E.R.,Guimaraes, F.E.G.,Espirito Santo, M.C.,McQueen-Mason, S.,Bruce, N.C.,Polikarpov, I. Targeted metatranscriptomics of compost-derived consortia reveals a GH11 exerting an unusual exo-1,4-beta-xylanase activity. Biotechnol Biofuels 2017 10 254 254 5NHS The crystal structure of Xanthomonas albilineans N5, N10-methylenetetrahydrofolate dehydrogenase-cyclohydrolase (FolD) 2017-03-22 2018-05-16 Bueno, R.V.,Guido, R.V.C.,Maluf, F.V.,Lima, G.M.A.,Oliveira, A.A. The crystal structure of Xanthomonas albilineans N5, N10-methylenetetrahydrofolate dehydrogenase-cyclohydrolase (FolD) To Be Published 0 0 0 0 6D43 29678765 CHARACTERIZATION OF HUMAN TRIOSEPHOSPHATE ISOMERASE S-NITROSYLATION 2018-04-17 2018-05-16 Romero, J.M.,Carrizo, M.E.,Curtino, J.A. Characterization of human triosephosphate isomerase S-nitrosylation. Nitric Oxide 2018 77 26 34 6DAY Xanthomonas albilineans Dihydropteroate synthase with 4-aminobenzoic acid at 1.65 A 2018-05-02 2018-06-06 Oliveira, A.A.,Guido, R.V.C.,Lima, G.M.A.,Maluf, F.V.,Bueno, R.V. Xanthomonas albilineans Dihydropteroate synthase with 4-aminobenzoic acid To Be Published 0 0 0 0 5W4C Crystal structure of thioredoxin reductase from Cryptococcus neoformans in complex with FAD (FO conformation) 2017-06-09 2018-06-13 Bravo-Chaucanes, C.P.,Valadares, N.F.,Felipe, M.S.S.,Barbosa, J.A.R.G. Crystal structure of thioredoxin reductase from Cryptococcus neoformans in complex with FAD (FO conformation) To be published 0 0 0 0 6BYC 29997257 Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri 2017-12-20 2018-07-18 Domingues, M.N.,Souza, F.H.M.,Vieira, P.S.,de Morais, M.A.B.,Zanphorlin, L.M.,Dos Santos, C.R.,Pirolla, R.A.S.,Honorato, R.V.,de Oliveira, P.S.L.,Gozzo, F.C.,Murakami, M.T. Structural basis of exo-beta-mannanase activity in the GH2 family. J. Biol. Chem. 2018 293 13636 13649 6BYE 29997257 Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri in complex with mannose 2017-12-20 2018-07-18 Domingues, M.N.,Souza, F.H.M.,Vieira, P.S.,de Morais, M.A.B.,Zanphorlin, L.M.,Dos Santos, C.R.,Pirolla, R.A.S.,Honorato, R.V.,de Oliveira, P.S.L.,Gozzo, F.C.,Murakami, M.T. Structural basis of exo-beta-mannanase activity in the GH2 family. J. Biol. Chem. 2018 293 13636 13649 6BYG 29997257 Crystal structure of the nucleophile mutant (E575A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri 2017-12-20 2018-07-18 Domingues, M.N.,Souza, F.H.M.,Vieira, P.S.,de Morais, M.A.B.,Zanphorlin, L.M.,Dos Santos, C.R.,Pirolla, R.A.S.,Honorato, R.V.,de Oliveira, P.S.L.,Gozzo, F.C.,Murakami, M.T. Structural basis of exo-beta-mannanase activity in the GH2 family. J. Biol. Chem. 2018 293 13636 13649 6BYI 29997257 Crystal structure of the acid-base mutant (E477A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri 2017-12-20 2018-07-18 Domingues, M.N.,Souza, F.H.M.,Vieira, P.S.,de Morais, M.A.B.,Zanphorlin, L.M.,Dos Santos, C.R.,Pirolla, R.A.S.,Honorato, R.V.,de Oliveira, P.S.L.,Gozzo, F.C.,Murakami, M.T. Structural basis of exo-beta-mannanase activity in the GH2 family. J. Biol. Chem. 2018 293 13636 13649 6B7U Structure of hen egg-white lysozyme without high-pressure pre-treatment 2017-10-05 2018-07-25 Morais, M.A.B.,Nascimento, A.F.Z.,Tominaga, C.Y.,Cristianini, M.,Tribst, A.A.L.,Murakami, M.T. How high pressure pre-treatments affect the function and structure of hen egg-white lysozyme Innov Food Sci Emerg Technol 2018 47 195 203 6B7V Structure of hen egg-white lysozyme pre-treated with high-pressure homogenization at 120 MPa 2017-10-05 2018-07-25 Morais, M.A.B.,Nascimento, A.F.Z.,Tominaga, C.Y.,Cristianini, M.,Tribst, A.A.L.,Murakami, M.T. How high pressure pre-treatments affect the function and structure of hen egg-white lysozyme Innov Food Sci Emerg Technol 2018 47 195 203 6B7W Structure of hen egg-white lysozyme pre-treated with high pressure (600 MPa) under isobaric condition 2017-10-05 2018-07-25 Morais, M.A.B.,Nascimento, A.F.Z.,Tominaga, C.Y.,Cristianini, M.,Tribst, A.A.L.,Murakami, M.T. How high pressure pre-treatments affect the function and structure of hen egg-white lysozyme Innov Food Sci Emerg Technol 2018 47 195 203 6CE2 29985425 Crystal structure of Myotoxin I (MjTX-I) from Bothrops moojeni complexed to inhibitor suramin 2018-02-10 2018-07-25 Salvador, G.H.M.,Dreyer, T.R.,Gomes, A.A.S.,Cavalcante, W.L.G.,Dos Santos, J.I.,Gandin, C.A.,de Oliveira Neto, M.,Gallacci, M.,Fontes, M.R.M. Structural and functional characterization of suramin-bound MjTX-I from Bothrops moojeni suggests a particular myotoxic mechanism. Sci Rep 2018 8 10317 10317 6B80 29287778 Crystal structure of myotoxin II from Bothrops moojeni complexed to myristic acid 2017-10-05 2018-10-03 Salvador, G.H.M.,Dos Santos, J.I.,Borges, R.J.,Fontes, M.R.M. Structural evidence for a fatty acid-independent myotoxic mechanism for a phospholipase A2-like toxin. Biochim Biophys Acta Proteins 2018 1866 473 481 6B81 29287778 Crystal structure of Myotoxin II from Bothrops moojeni complexed to Caprylic acid 2017-10-05 2018-10-03 Salvador, G.H.M.,Dos Santos, J.I.,Borges, R.J.,Fontes, M.R.M. Structural evidence for a fatty acid-independent myotoxic mechanism for a phospholipase A2-like toxin. Biochim Biophys Acta Proteins 2018 1866 473 481 6B83 29287778 Crystal structure of Myotoxin II from Bothrops moojeni complexed to Caproic acid 2017-10-05 2018-10-03 Salvador, G.H.M.,Dos Santos, J.I.,Borges, R.J.,Fontes, M.R.M. Structural evidence for a fatty acid-independent myotoxic mechanism for a phospholipase A2-like toxin. Biochim Biophys Acta Proteins 2018 1866 473 481 6B84 29287778 Crystal structure of Myotoxin II from Bothrops moojeni 2017-10-05 2018-10-03 Salvador, G.H.M.,Dos Santos, J.I.,Borges, R.J.,Fontes, M.R.M. Structural evidence for a fatty acid-independent myotoxic mechanism for a phospholipase A2-like toxin. Biochim Biophys Acta Proteins 2018 1866 473 481 6DIK 30251662 Crystal structure of Bothropstoxin I (BthTX-I) complexed to Chicoric acid 2018-05-23 2018-10-03 Cardoso, F.F.,Borges, R.J.,Dreyer, T.R.,Salvador, G.H.M.,Cavalcante, W.L.G.,Pai, M.D.,Gallacci, M.,Fontes, M.R.M. Structural basis of phospholipase A2-like myotoxin inhibition by chicoric acid, a novel potent inhibitor of ophidian toxins. Biochim Biophys Acta Gen Subj 2018 1862 2728 2737 6FY0 30540944 Crystal structure of a V2-directed, RV144 vaccine-like antibody from HIV-1 infection, CAP228-16H, bound to a heterologous V2 peptide 2018-03-10 2018-11-21 van Eeden, C.,Wibmer, C.K.,Scheepers, C.,Richardson, S.I.,Nonyane, M.,Lambson, B.,Mkhize, N.N.,Vijayakumar, B.,Sheng, Z.,Stanfield-Oakley, S.,Bhiman, J.N.,Bekker, V.,Hermanus, T.,Mabvakure, B.,Ismail, A.,Moody, M.A.,Wiehe, K.,Garrett, N.,Karim, S.A.,Dirr, H.,Fernandes, M.A.,Sayed, Y.,Shapiro, L.,Ferrari, G.,Haynes, B.F.,Moore, P.L.,Morris, L. V2-Directed Vaccine-like Antibodies from HIV-1 Infection Identify an Additional K169-Binding Light Chain Motif with Broad ADCC Activity. Cell Rep 2018 25 3123 0 6CYO 30531907 Crystal structure of human UBE2A (RAD6A) 2018-04-06 2018-12-12 de Oliveira, J.F.,do Prado, P.F.V.,da Costa, S.S.,Sforca, M.L.,Canateli, C.,Ranzani, A.T.,Maschietto, M.,de Oliveira, P.S.L.,Otto, P.A.,Klevit, R.E.,Krepischi, A.C.V.,Rosenberg, C.,Franchini, K.G. Mechanistic insights revealed by a UBE2A mutation linked to intellectual disability. Nat. Chem. Biol. 2019 15 62 70 6CYR 30531907 Crystal structure of the UBE2A variant Q93E 2018-04-06 2018-12-12 de Oliveira, J.F.,do Prado, P.F.V.,da Costa, S.S.,Sforca, M.L.,Canateli, C.,Ranzani, A.T.,Maschietto, M.,de Oliveira, P.S.L.,Otto, P.A.,Klevit, R.E.,Krepischi, A.C.V.,Rosenberg, C.,Franchini, K.G. Mechanistic insights revealed by a UBE2A mutation linked to intellectual disability. Nat. Chem. Biol. 2019 15 62 70 6BZ5 30703421 Structure and mechanism of salicylate hydroxylase from Pseudomonas putida G7 2017-12-22 2018-12-26 Costa, D.M.A.,Gomez, S.V.,de Araujo, S.S.,Pereira, M.S.,Alves, R.B.,Favaro, D.C.,Hengge, A.C.,Nagem, R.A.P.,Brandao, T.A.S. Catalytic mechanism for the conversion of salicylate into catechol by the flavin-dependent monooxygenase salicylate hydroxylase. Int.J.Biol.Macromol. 2019 129 588 600 6MOY 30641082 Crystal structure of the E257A mutant of BlMan5B in complex with GlcNAc (co-crystallization) 2018-10-05 2019-01-30 Cordeiro, R.L.,Pirolla, R.A.S.,Persinoti, G.F.,Gozzo, F.C.,de Giuseppe, P.O.,Murakami, M.T. N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist beta-Mannosidase. J. Mol. Biol. 2019 431 732 747 6MP2 30641082 Crystal structure of BlMan5B solved by SIRAS 2018-10-05 2019-01-30 Cordeiro, R.L.,Pirolla, R.A.S.,Persinoti, G.F.,Gozzo, F.C.,de Giuseppe, P.O.,Murakami, M.T. N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist beta-Mannosidase. J. Mol. Biol. 2019 431 732 747 6MP7 30641082 Crystal structure of the E257A mutant of BlMan5B in complex with GlcNAc (soaking) 2018-10-05 2019-01-30 Cordeiro, R.L.,Pirolla, R.A.S.,Persinoti, G.F.,Gozzo, F.C.,de Giuseppe, P.O.,Murakami, M.T. N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist beta-Mannosidase. J. Mol. Biol. 2019 431 732 747 6MPA 30641082 Crystal structure of BlMan5B in complex with GlcNAc (soaking) 2018-10-05 2019-01-30 Cordeiro, R.L.,Pirolla, R.A.S.,Persinoti, G.F.,Gozzo, F.C.,de Giuseppe, P.O.,Murakami, M.T. N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist beta-Mannosidase. J. Mol. Biol. 2019 431 732 747 6MPC 30641082 Crystal structure of E257A mutant of BlMan5B 2018-10-05 2019-01-30 Cordeiro, R.L.,Pirolla, R.A.S.,Persinoti, G.F.,Gozzo, F.C.,de Giuseppe, P.O.,Murakami, M.T. N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist beta-Mannosidase. J. Mol. Biol. 2019 431 732 747 6CC7 Structure of Fungal GH62 from Thielavia terretris 2018-02-06 2019-02-13 Camargo, S.,Mulinari, E.J.,Almeida, L.R.,Muniz, J.R.C. Structure of Fungal GH62 from Thielavia terretris To Be Published 0 0 0 0 6D51 30556998 Crystal structure of L,D-transpeptidase 3 from Mycobacterium tuberculosis in complex with a faropenem-derived adduct 2018-04-19 2019-02-27 Libreros-Zuniga, G.A.,Dos Santos Silva, C.,Salgado Ferreira, R.,Dias, M.V.B. Structural Basis for the Interaction and Processing of beta-Lactam Antibiotics by l,d-Transpeptidase 3 (LdtMt3) from Mycobacterium tuberculosis. ACS Infect Dis 2019 5 260 271 6D5A 30556998 Crystal structure of L,D-transpeptidase 5 from Mycobacterium tuberculosis in apo form 2018-04-19 2019-02-27 Libreros-Zuniga, G.A.,Dos Santos Silva, C.,Salgado Ferreira, R.,Dias, M.V.B. Structural Basis for the Interaction and Processing of beta-Lactam Antibiotics by l,d-Transpeptidase 3 (LdtMt3) from Mycobacterium tuberculosis. ACS Infect Dis 2019 5 260 271 6E5M 30817908 Crystallographic structure of the cyclic nonapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 32 2 1 2018-07-20 2019-03-13 Fernandes, J.P.C.,Mehdad, A.,Valadares, N.F.,Mourao, C.B.F.,Ventura, M.M.,Barbosa, J.A.R.G.,Freitas, S.M. Crystallographic structure of a complex between trypsin and a nonapeptide derived from a Bowman-Birk inhibitor found in Vigna unguiculata seeds. Arch. Biochem. Biophys. 2019 665 79 86 6EAT 30817908 Crystallographic structure of the cyclic nonapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21. 2018-08-03 2019-03-13 Fernandes, J.P.C.,Mehdad, A.,Valadares, N.F.,Mourao, C.B.F.,Ventura, M.M.,Barbosa, J.A.R.G.,Freitas, S.M. Crystallographic structure of a complex between trypsin and a nonapeptide derived from a Bowman-Birk inhibitor found in Vigna unguiculata seeds. Arch. Biochem. Biophys. 2019 665 79 86 6MQD 30679550 Myotoxin II from Bothrops moojeni complexed with Rosmarinic Acid 2018-10-09 2019-03-20 Salvador, G.H.M.,Cardoso, F.F.,Gomes, A.A.,Cavalcante, W.L.G.,Gallacci, M.,Fontes, M.R.M. Search for efficient inhibitors of myotoxic activity induced by ophidian phospholipase A2-like proteins using functional, structural and bioinformatics approaches. Sci Rep 2019 9 510 510 6MQF 30679550 Myotoxin II from Bothrops moojeni complexed with Acetylsalicylic acid 2018-10-09 2019-03-20 Salvador, G.H.M.,Cardoso, F.F.,Gomes, A.A.,Cavalcante, W.L.G.,Gallacci, M.,Fontes, M.R.M. Search for efficient inhibitors of myotoxic activity induced by ophidian phospholipase A2-like proteins using functional, structural and bioinformatics approaches. Sci Rep 2019 9 510 510 6MS2 30556897 Crystal structure of the GH43 BlXynB protein from Bacillus licheniformis 2018-10-16 2019-04-17 Zanphorlin, L.M.,de Morais, M.A.B.,Diogo, J.A.,Domingues, M.N.,de Souza, F.H.M.,Ruller, R.,Murakami, M.T. Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43. Biotechnol. Bioeng. 2019 116 734 744 6DDN The sulfate-binding protein SubI from Mycobacterium tuberculosis H37Rv 2018-05-10 2019-05-15 Meza, A.N.,Nascimento, A.F.Z.,Balan, A. Structural characterization of SubI, a new target for Mycobacterium tuberculosis To Be Published 0 0 0 0 6DGS Crystal Structure of Leishmania major dihydroorotate dehydrogenase mutant Y142A 2018-05-18 2019-05-29 Reis, R.A.G.,Pinheiro, M.P.,Nonato, M.C. Crystal Structure of Leishmania major dihydroorotate dehydrogenase mutant Y142A To Be Published 0 0 0 0 6DWG Crystal structure of Leishmania major dihydroorotate dehydrogenase mutant Q139A 2018-06-26 2019-06-26 Reis, R.A.G.,Pinheiro, M.P.,Nonato, M.C. Crystal structure of Leishmania major dihydroorotate dehydrogenase mutant Q139A To Be Published 0 0 0 0 6EFU 30894609 Crystal structure of the double mutant L167W / P172L of the beta-glucosidase from Trichoderma harzianum 2018-08-17 2019-06-26 Santos, C.A.,Morais, M.A.B.,Terrett, O.M.,Lyczakowski, J.J.,Zanphorlin, L.M.,Ferreira-Filho, J.A.,Tonoli, C.C.C.,Murakami, M.T.,Dupree, P.,Souza, A.P. An engineered GH1 beta-glucosidase displays enhanced glucose tolerance and increased sugar release from lignocellulosic materials. Sci Rep 2019 9 4903 4903 6NNC 31282477 Structure of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with NADPH and pemetrexed 2019-01-14 2019-07-17 Ribeiro, J.A.,Chavez-Pacheco, S.M.,de Oliveira, G.S.,Silva, C.D.S.,Giudice, J.H.P.,Libreros-Zuniga, G.A.,Dias, M.V.B. Crystal structures of the closed form of Mycobacterium tuberculosis dihydrofolate reductase in complex with dihydrofolate and antifolates. Acta Crystallogr D Struct Biol 2019 75 682 693 6NND 31282477 Structure of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with NADPH and dihydrofolate 2019-01-14 2019-07-17 Ribeiro, J.A.,Chavez-Pacheco, S.M.,de Oliveira, G.S.,Silva, C.D.S.,Giudice, J.H.P.,Libreros-Zuniga, G.A.,Dias, M.V.B. Crystal structures of the closed form of Mycobacterium tuberculosis dihydrofolate reductase in complex with dihydrofolate and antifolates. Acta Crystallogr D Struct Biol 2019 75 682 693 6NNE 31282477 Crystal structure of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with diaverdine 2019-01-14 2019-07-17 Ribeiro, J.A.,Chavez-Pacheco, S.M.,de Oliveira, G.S.,Silva, C.D.S.,Giudice, J.H.P.,Libreros-Zuniga, G.A.,Dias, M.V.B. Crystal structures of the closed form of Mycobacterium tuberculosis dihydrofolate reductase in complex with dihydrofolate and antifolates. Acta Crystallogr D Struct Biol 2019 75 682 693 6NNH 31282477 Structure of Closed state of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with NADPH and cycloguanil 2019-01-15 2019-07-17 Ribeiro, J.A.,Chavez-Pacheco, S.M.,de Oliveira, G.S.,Silva, C.D.S.,Giudice, J.H.P.,Libreros-Zuniga, G.A.,Dias, M.V.B. Crystal structures of the closed form of Mycobacterium tuberculosis dihydrofolate reductase in complex with dihydrofolate and antifolates. Acta Crystallogr D Struct Biol 2019 75 682 693 6NNI 31282477 Structure of closed state of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with NADPH and pyrimethamine 2019-01-15 2019-07-17 Ribeiro, J.A.,Chavez-Pacheco, S.M.,de Oliveira, G.S.,Silva, C.D.S.,Giudice, J.H.P.,Libreros-Zuniga, G.A.,Dias, M.V.B. Crystal structures of the closed form of Mycobacterium tuberculosis dihydrofolate reductase in complex with dihydrofolate and antifolates. Acta Crystallogr D Struct Biol 2019 75 682 693 6EAU Crystallographic structure of the octapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21. 2018-08-03 2019-08-07 Fenandes, J.F.,Valadares, N.F.,Freitas, S.M.,Barbosa, J.A.R.G. Crystallographic structure of the octapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21. To Be Published 0 0 0 0 6EAV Crystallographic structure of the cyclic heptapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 4(1) 2(1) 2 2018-08-03 2019-08-07 Fenandes, J.F.,Valadares, N.F.,Freitas, S.M.,Barbosa, J.A.R.G. Crystallographic structure of the cyclic heptapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 4(1) 2(1) 2 To Be Published 0 0 0 0 6EAW Crystallographic structure of the cyclic heptapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21 2018-08-03 2019-08-07 Fenandes, J.F.,Valadares, N.F.,Freitas, S.M.,Barbosa, J.A.R.G. Crystallographic structure of the cyclic heptapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21 To Be Published 0 0 0 0 6EAX Crystallographic structure of the cyclic hexapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21 2018-08-03 2019-08-07 Fenandes, J.F.,Valadares, N.F.,Freitas, S.M.,Barbosa, J.A.R.G. Crystallographic structure of the cyclic hexapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21 To Be Published 0 0 0 0 6PDK 31513674 The Structure of Smlt3025, an immunity protein of the Stenotrophomonas maltophilia type IV secretion system 2019-06-19 2019-09-04 Bayer-Santos, E.,Cenens, W.,Matsuyama, B.Y.,Oka, G.U.,Di Sessa, G.,Mininel, I.D.V.,Alves, T.L.,Farah, C.S. The opportunistic pathogen Stenotrophomonas maltophilia utilizes a type IV secretion system for interbacterial killing. Plos Pathog. 2019 15 0 0 6MFB Crystal structure of 3-hydroxykynurenine transaminase from Aedes aegypti 2018-09-10 2019-09-18 Maciel, L.G.,Oliveira, A.A.,Romao, T.P.,Silva Filha, M.H.N.L.,dos Anjos, J.V.,Soares, T.A.,Guido, R.V.C. Crystal structure of 3-hydroxykynurenine transaminase from Aedes aegypti To Be Published 0 0 0 0 6MVJ 31472178 Cellobiose complex Cel45A from Neurospora crassa OR74A 2018-10-25 2019-10-30 Kadowaki, M.A.S.,Polikarpov, I. Structural insights into the hydrolysis pattern and molecular dynamics simulations of GH45 subfamily a endoglucanase from Neurospora crassa OR74A. Biochimie 2019 165 275 284 6N3K 30771398 Crystal structure of an epoxide hydrolase from Trichoderma reesei in complex with inhibitor 1 2018-11-15 2019-11-20 de Oliveira, G.S.,Adriani, P.P.,Ribeiro, J.A.,Morisseau, C.,Hammock, B.D.,Dias, M.V.B.,Chambergo, F.S. The molecular structure of an epoxide hydrolase from Trichoderma reesei in complex with urea or amide-based inhibitors. Int. J. Biol. Macromol. 2019 129 653 658 6N3Z 30771398 Crystal structure of an epoxide hydrolase from Trichoderma reesei in complex with inhibitor 4 2018-11-16 2019-11-20 de Oliveira, G.S.,Adriani, P.P.,Ribeiro, J.A.,Morisseau, C.,Hammock, B.D.,Dias, M.V.B.,Chambergo, F.S. The molecular structure of an epoxide hydrolase from Trichoderma reesei in complex with urea or amide-based inhibitors. Int. J. Biol. Macromol. 2019 129 653 658 6N5F 30771398 Crystal structure of an epoxide hydrolase from Trichoderma reesei in complex with inhibitor 3 2018-11-21 2019-11-20 de Oliveira, G.S.,Adriani, P.P.,Ribeiro, J.A.,Morisseau, C.,Hammock, B.D.,Dias, M.V.B.,Chambergo, F.S. The molecular structure of an epoxide hydrolase from Trichoderma reesei in complex with urea or amide-based inhibitors. Int. J. Biol. Macromol. 2019 129 653 658 6N5G 30771398 Crystal structure of an epoxide hydrolase from Trichoderma reesei in complex with inhibitor 2 2018-11-21 2019-11-20 de Oliveira, G.S.,Adriani, P.P.,Ribeiro, J.A.,Morisseau, C.,Hammock, B.D.,Dias, M.V.B.,Chambergo, F.S. The molecular structure of an epoxide hydrolase from Trichoderma reesei in complex with urea or amide-based inhibitors. Int. J. Biol. Macromol. 2019 129 653 658 6N5H 30771398 Crystal structure of an epoxide hydrolase from Trichoderma reesei in complex with inhibitor 5 2018-11-21 2019-11-20 Oliveira, G.S.,Adriano, P.P.,Ribeiro, J.A.,Morisseau, C.,Hammock, B.D.,Dias, M.V.,Chambergo, F.S. The molecular structure of an epoxide hydrolase from Trichoderma reesei in complex with urea or amide-based inhibitors Int. J. Biol. Macromol. 2019 129 653 658 6N98 32035160 Xylose isomerase 1F1 variant from Streptomyces sp. F-1 2018-12-01 2019-12-04 Miyamoto, R.Y.,de Sousa, A.S.,Vieira, P.S.,de Melo, R.R.,Scarpassa, J.A.,Ramos, C.H.I.,Murakami, M.T.,Ruller, R.,Zanphorlin, L.M. Crystal structure of a novel xylose isomerase from Streptomyces sp. F-1 revealed the presence of unique features that differ from conventional classes. Biochim Biophys Acta Gen Subj 2020 1864 129549 129549 6N99 32035160 Xylose isomerase 2F1 variant from Streptomyces sp. F-1 2018-12-01 2019-12-04 Miyamoto, R.Y.,de Sousa, A.S.,Vieira, P.S.,de Melo, R.R.,Scarpassa, J.A.,Ramos, C.H.I.,Murakami, M.T.,Ruller, R.,Zanphorlin, L.M. Crystal structure of a novel xylose isomerase from Streptomyces sp. F-1 revealed the presence of unique features that differ from conventional classes. Biochim Biophys Acta Gen Subj 2020 1864 129549 129549 6PWH 31748642 Cystal structure of Myotoxin II from Bothrops moojeni co-crystallized with Varespladib (LY315920) 2019-07-23 2019-12-04 Salvador, G.H.M.,Gomes, A.A.S.,Bryan-Quiros, W.,Fernandez, J.,Lewin, M.R.,Gutierrez, J.M.,Lomonte, B.,Fontes, M.R.M. Structural basis for phospholipase A2-like toxin inhibition by the synthetic compound Varespladib (LY315920). Sci Rep 2019 9 17203 17203 6NDQ Crystal structure of a LPMO from Kitasatospora papulosa 2018-12-14 2019-12-18 Correa, T.L.C.,Tomazini Jr., A.,Murakami, M.T. Crystal structure of a LPMO from Kitasatospora papulosa To Be Published 0 0 0 0 6UEK 31843618 Structure of Urocanate Hydratase from Trypanosoma cruzi in complex with NAD+ 2019-09-21 2020-01-15 Boreiko, S.,Silva, M.,de F P Melo, R.,Silber, A.M.,Iulek, J. Structure of Urocanate Hydratase from the protozoan Trypanosoma cruzi. Int.J.Biol.Macromol. 2019 146 716 724 6VDG 34320379 Crystal Structure of the Y182A HisF Mutant from Thermotoga maritima 2019-12-27 2020-01-15 Medeiros Almeida, V.,Chaudhuri, A.,Cangussu Cardoso, M.V.,Matsuyama, B.Y.,Monteiro Ferreira, G.,Goulart Trossini, G.H.,Salinas, R.K.,Loria, J.P.,Marana, S.R. Role of a high centrality residue in protein dynamics and thermal stability. J.Struct.Biol. 2021 213 107773 107773 6NOB Structure of Glycoside Hydrolase family 32 from Bifidobacterium adolescentis 2019-01-16 2020-01-22 Mera, A.,Lima, M.Z.T.,Bernardes, A.,Garcia, W.,Muniz, J.R.C. Structure of GH32 from Bifidobacterium adolescentis To Be Published 0 0 0 0 6P6A 31996719 Structure of Mouse Importin alpha - NIT2 NLS peptide complex 2019-06-03 2020-01-29 Bernardes, N.E.,Fukuda, C.A.,da Silva, T.D.,de Oliveira, H.C.,de Barros, A.C.,Dreyer, T.R.,Bertolini, M.C.,Fontes, M.R.M. Comparative study of the interactions between fungal transcription factor nuclear localization sequences with mammalian and fungal importin-alpha. Sci Rep 2020 10 1458 1458 6P6E 31996719 Structure of Mouse Importin alpha - PAC3 NLS peptide complex 2019-06-03 2020-01-29 Bernardes, N.E.,Fukuda, C.A.,da Silva, T.D.,de Oliveira, H.C.,de Barros, A.C.,Dreyer, T.R.,Bertolini, M.C.,Fontes, M.R.M. Comparative study of the interactions between fungal transcription factor nuclear localization sequences with mammalian and fungal importin-alpha. Sci Rep 2020 10 1458 1458 6NU8 Structure of sucrose-6-phosphate hydrolase from Lactobacillus gasseri in complex with fructose 2019-01-31 2020-02-05 Lima, M.Z.T.,Muniz, J.R.C. Structure of sucrose-6-phosphate hydrolase from Lactobacillus gasseri in complex with fructose To Be Published 0 0 0 0 6UEH 32139511 Crystal structure of a ruminal GH26 endo-beta-1,4-mannanase 2019-09-21 2020-03-11 Mandelli, F.,de Morais, M.A.B.,de Lima, E.A.,Oliveira, L.,Persinoti, G.F.,Murakami, M.T. Spatially remote motifs cooperatively affect substrate preference of a ruminal GH26-type endo-beta-1,4-mannanase. J.Biol.Chem. 2020 295 5012 5021 6O9N 32653619 Structural insights on a new fungal aryl-alcohol oxidase 2019-03-14 2020-03-18 Kadowaki, M.A.S.,Higasi, P.M.R.,de Godoy, M.O.,de Araujo, E.A.,Godoy, A.S.,Prade, R.A.,Polikarpov, I. Enzymatic versatility and thermostability of a new aryl-alcohol oxidase from Thermothelomyces thermophilus M77. Biochim Biophys Acta Gen Subj 2020 1864 129681 129681 6OFW Dihydropteroate synthase from Xanthomonas albilineans in complex with 7,8-dihydropteroate 2019-04-01 2020-04-08 Oliveira, A.A.,Guido, R.V.C. Dihydropteroate synthase from Xanthomonas albilineans in complex with 7,8-dihydropteroate To Be Published 0 0 0 0 6P5U 31841665 Structure of an enoyl-CoA hydratase/aldolase isolated from a lignin-degrading consortium 2019-05-31 2020-04-08 Liberato, M.V.,Araujo, J.N.,Sodre, V.,Goncalves, T.A.,Vilela, N.,Moraes, E.C.,Garcia, W.,Squina, F.M. The structure of a prokaryotic feruloyl-CoA hydratase-lyase from a lignin-degrading consortium with high oligomerization stability under extreme pHs. Biochim Biophys Acta Proteins 2020 1868 140344 140344 6WJO 32156582 Crystal structure of wild-type Arginine Repressor from the pathogenic bacterium Corynebacterium pseudotuberculosis bound to tyrosine 2020-04-14 2020-04-22 Mariutti, R.B.,Hernandez-Gonzalez, J.E.,Nascimento, A.F.Z.,de Morais, M.A.B.,Murakami, M.T.,Carareto, C.M.A.,Arni, R.K. A single P115Q mutation modulates specificity in the Corynebacterium pseudotuberculosis arginine repressor. Biochim Biophys Acta Gen Subj 2020 1864 129597 0 6WJP 32156582 Crystal structure of Arginine Repressor P115Q mutant from the pathogenic bacterium Corynebacterium pseudotuberculosis bound to arginine 2020-04-14 2020-04-22 Mariutti, R.B.,Hernandez-Gonzalez, J.E.,Nascimento, A.F.Z.,de Morais, M.A.B.,Murakami, M.T.,Carareto, C.M.A.,Arni, R.K. A single P115Q mutation modulates specificity in the Corynebacterium pseudotuberculosis arginine repressor. Biochim Biophys Acta Gen Subj 2020 1864 129597 0 6ORM 32771148 Crystal Structure of Peruvianin-I (Cysteine peptidase from Thevetia peruviana latex) 2019-04-30 2020-05-06 Cruz, W.T.,Bezerra, E.H.S.,Ramos, M.V.,Rocha, B.A.M.,Medina, M.C.,Demarco, D.,Carvalho, C.P.S.,Oliveira, J.S.,Sousa, J.S.,Souza, P.F.N.,Freire, V.N.,da Silva, F.M.S.,Freitas, C.D.T. Crystal structure and specific location of a germin-like protein with proteolytic activity from Thevetia peruviana. Plant Sci. 2020 298 110590 110590 6UAQ 32451508 Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase from Amycolatopsis mediterranei (AmGH128_I) 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UAR 32451508 Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaritriose 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UAS 32451508 Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E199A mutant) from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaripentaose 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UAT 32451508 Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E102A mutant) from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaripentaose 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UAU 32451508 Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E102A mutant) from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaritriose and laminaribiose 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UAV 32451508 Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from Pseudomonas viridiflava (PvGH128_II) 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UAW 32451508 Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from Pseudomonas viridiflava (PvGH128_II) in complex with laminaritriose 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UAY 32451508 Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UAZ 32451508 Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with glucose 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UB0 32451508 Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with laminaribiose at -2 and -1 subsites 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UB1 32451508 Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with laminaribiose at -3 and -2 subsites 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UB3 32451508 Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) with laminaribiose at the surface-binding site 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UB4 32451508 Crystal structure (C2 form) of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) in complex with laminaritriose 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UB5 32451508 Crystal structure (P21 form) of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) in complex with laminaritriose 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UB6 32451508 Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) in complex with laminaritetraose 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UB7 32451508 Crystal structure of a GH128 (subgroup V) exo-beta-1,3-glucanase from Cryptococcus neoformans (CnGH128_V) 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UB8 32451508 Crystal structure of a GH128 (subgroup VI) exo-beta-1,3-glucanase from Aureobasidium namibiae (AnGH128_VI) 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UBA 32451508 Crystal structure of a GH128 (subgroup VI) exo-beta-1,3-glucanase from Aureobasidium namibiae (AnGH128_VI) in complex with laminaritriose 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UBB 32451508 Crystal structure of a GH128 (subgroup VI) exo-beta-1,3-glucanase from Aureobasidium namibiae (AnGH128_VI) with laminaribiose at the surface-binding site 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6UBD 32451508 Crystal structure of a GH128 (subgroup VII) oligosaccharide-binding protein from Trichoderma gamsii (TgGH128_VII) 2019-09-11 2020-05-20 Santos, C.R.,Costa, P.A.C.R.,Vieira, P.S.,Gonzalez, S.E.T.,Correa, T.L.R.,Lima, E.A.,Mandelli, F.,Pirolla, R.A.S.,Domingues, M.N.,Cabral, L.,Martins, M.P.,Cordeiro, R.L.,Junior, A.T.,Souza, B.P.,Prates, E.T.,Gozzo, F.C.,Persinoti, G.F.,Skaf, M.S.,Murakami, M.T. Structural insights into beta-1,3-glucan cleavage by a glycoside hydrolase family. Nat.Chem.Biol. 2020 16 920 929 6V6Y 32401802 Crystal Structure of T. thermophilus methylenetetrahydrofolate dehydrogenase (MTHFD) 2019-12-06 2020-05-27 Maiello, F.,Gallo, G.,Coelho, C.,Sucharski, F.,Hardy, L.,Wurtele, M. Crystal structure of Thermus thermophilus methylenetetrahydrofolate dehydrogenase and determinants of thermostability. Plos One 2020 15 0 0 6V6H 32464165 Crystal structure of histidine ammonia-lyase from Trypanosoma cruzi 2019-12-05 2020-06-10 Miranda, R.R.,Silva, M.,Barison, M.J.,Silber, A.M.,Iulek, J. Crystal structure of histidine ammonia-lyase from Trypanosoma cruzi. Biochimie 2020 175 181 188 6MRQ 32787139 Structure of ToPI1 inhibitor from Tityus obscurus scorpion venom in complex with trypsin 2018-10-15 2020-07-01 Mourao, C.B.F.,Brand, G.D.,Fernandes, J.P.C.,Prates, M.V.,Bloch Jr., C.,Barbosa, J.A.R.G.,Freitas, S.M.,Restano-Cassulini, R.,Possani, L.D.,Schwartz, E.F. Head-to-Tail Cyclization after Interaction with Trypsin: A Scorpion Venom Peptide that Resembles Plant Cyclotides. J.Med.Chem. 2020 63 9500 9511 6UP1 32585311 Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure 2019-10-16 2020-07-01 Romero, J.M. Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure. Arch.Biochem.Biophys. 2020 689 108473 108473 6UP5 32585311 Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure 2019-10-16 2020-07-01 Romero, J.M. Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure. Arch.Biochem.Biophys. 2020 689 108473 108473 6UP8 32585311 Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure 2019-10-16 2020-07-01 Romero, J.M. Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure. Arch.Biochem.Biophys. 2020 689 108473 108473 6UPF 32585311 Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure 2019-10-17 2020-07-01 Romero, J.M. Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure. Arch.Biochem.Biophys. 2020 689 108473 108473 6UTL 32615144 Yeast Thiol Specific antoxidant 2 with C171S mutation and catalytic cysteine alkylated with iodoacetamide 2019-10-29 2020-07-15 Anschau, V.,Ferrer-Sueta, G.,Aleixo-Silva, R.L.,Bannitz Fernandes, R.,Tairum, C.A.,Tonoli, C.C.C.,Murakami, M.T.,de Oliveira, M.A.,Netto, L.E.S. Reduction of sulfenic acids by ascorbate in proteins, connecting thiol-dependent to alternative redox pathways. Free Radic Biol Med 2020 156 207 216 6VS6 32603583 Mycobacterium tuberculosis dihydrofolate reductase in complex with 3-(furan-2-yl)-1-methyl-1H-pyrazole-5-carboxylic acid (fragment 2) 2020-02-10 2020-07-15 Ribeiro, J.A.,Hammer, A.,Libreros-Zuniga, G.A.,Chavez-Pacheco, S.M.,Tyrakis, P.,de Oliveira, G.S.,Kirkman, T.,El Bakali, J.,Rocco, S.A.,Sforca, M.L.,Parise-Filho, R.,Coyne, A.G.,Blundell, T.L.,Abell, C.,Dias, M.V.B. Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis. Acs Infect Dis. 2020 6 2192 2201 6VS9 32603583 Mycobacterium tuberculosis dihydrofolate reductase in complex with 3-(piperidin-1-ylmethyl)benzoic acid(fragment 11) 2020-02-10 2020-07-15 Ribeiro, J.A.,Hammer, A.,Libreros-Zuniga, G.A.,Chavez-Pacheco, S.M.,Tyrakis, P.,de Oliveira, G.S.,Kirkman, T.,El Bakali, J.,Rocco, S.A.,Sforca, M.L.,Parise-Filho, R.,Coyne, A.G.,Blundell, T.L.,Abell, C.,Dias, M.V.B. Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis. Acs Infect Dis. 2020 6 2192 2201 6VSD 32603583 Mycobacterium tuberculosis dihydrofolate reductase in complex with 3-((thiophen-2-ylthio)methyl)benzoic acid (fragment 13) 2020-02-11 2020-07-15 Ribeiro, J.A.,Hammer, A.,Libreros-Zuniga, G.A.,Chavez-Pacheco, S.M.,Tyrakis, P.,de Oliveira, G.S.,Kirkman, T.,El Bakali, J.,Rocco, S.A.,Sforca, M.L.,Parise-Filho, R.,Coyne, A.G.,Blundell, T.L.,Abell, C.,Dias, M.V.B. Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis. Acs Infect Dis. 2020 6 2192 2201 6VSE 32603583 Mycobacterium tuberculosis dihydrofolate reductase in complex with 3-(phenoxymethyl)benzoic acid(fragment 14) 2020-02-11 2020-07-15 Ribeiro, J.A.,Hammer, A.,Libreros-Zuniga, G.A.,Chavez-Pacheco, S.M.,Tyrakis, P.,de Oliveira, G.S.,Kirkman, T.,El Bakali, J.,Rocco, S.A.,Sforca, M.L.,Parise-Filho, R.,Coyne, A.G.,Blundell, T.L.,Abell, C.,Dias, M.V.B. Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis. Acs Infect Dis. 2020 6 2192 2201 6VSF 32603583 Mycobacterium tuberculosis dihydrofolate reductase in complex with 4-(3,4-dihydro-2H-benzo[b][1,4]dioxepin-7-yl)-4-oxobutanoic acid(fragment 16) 2020-02-11 2020-07-15 Ribeiro, J.A.,Hammer, A.,Libreros-Zuniga, G.A.,Chavez-Pacheco, S.M.,Tyrakis, P.,de Oliveira, G.S.,Kirkman, T.,El Bakali, J.,Rocco, S.A.,Sforca, M.L.,Parise-Filho, R.,Coyne, A.G.,Blundell, T.L.,Abell, C.,Dias, M.V.B. Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis. Acs Infect Dis. 2020 6 2192 2201 6VSG 32603583 Mycobacterium tuberculosis dihydrofolate reductase in complex with 4-(trifluoromethyl)benzene-1,2-diamine(fragment 17) 2020-02-11 2020-07-15 Ribeiro, J.A.,Hammer, A.,Libreros-Zuniga, G.A.,Chavez-Pacheco, S.M.,Tyrakis, P.,de Oliveira, G.S.,Kirkman, T.,El Bakali, J.,Rocco, S.A.,Sforca, M.L.,Parise-Filho, R.,Coyne, A.G.,Blundell, T.L.,Abell, C.,Dias, M.V.B. Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis. Acs Infect Dis. 2020 6 2192 2201 6VV6 32603583 Mycobacterium tuberculosis dihydrofolate reductase in complex with JEB113 2020-02-17 2020-07-15 Ribeiro, J.A.,Hammer, A.,Libreros-Zuniga, G.A.,Chavez-Pacheco, S.M.,Tyrakis, P.,de Oliveira, G.S.,Kirkman, T.,El Bakali, J.,Rocco, S.A.,Sforca, M.L.,Parise-Filho, R.,Coyne, A.G.,Blundell, T.L.,Abell, C.,Dias, M.V.B. Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis. Acs Infect Dis. 2020 6 2192 2201 6VV7 32603583 Mycobacterium tuberculosis dihydrofolate reductase in complex with JEB136 2020-02-17 2020-07-15 Ribeiro, J.A.,Hammer, A.,Libreros-Zuniga, G.A.,Chavez-Pacheco, S.M.,Tyrakis, P.,de Oliveira, G.S.,Kirkman, T.,El Bakali, J.,Rocco, S.A.,Sforca, M.L.,Parise-Filho, R.,Coyne, A.G.,Blundell, T.L.,Abell, C.,Dias, M.V.B. Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis. Acs Infect Dis. 2020 6 2192 2201 6VV8 32603583 Mycobacterium tuberculosis dihydrofolate reductase in complex with JEB285 2020-02-17 2020-07-15 Ribeiro, J.A.,Hammer, A.,Libreros-Zuniga, G.A.,Chavez-Pacheco, S.M.,Tyrakis, P.,de Oliveira, G.S.,Kirkman, T.,El Bakali, J.,Rocco, S.A.,Sforca, M.L.,Parise-Filho, R.,Coyne, A.G.,Blundell, T.L.,Abell, C.,Dias, M.V.B. Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis. Acs Infect Dis. 2020 6 2192 2201 6VV9 32603583 Mycobacterium tuberculosis dihydrofolate reductase in complex with JEB300 2020-02-17 2020-07-15 Ribeiro, J.A.,Hammer, A.,Libreros-Zuniga, G.A.,Chavez-Pacheco, S.M.,Tyrakis, P.,de Oliveira, G.S.,Kirkman, T.,El Bakali, J.,Rocco, S.A.,Sforca, M.L.,Parise-Filho, R.,Coyne, A.G.,Blundell, T.L.,Abell, C.,Dias, M.V.B. Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis. Acs Infect Dis. 2020 6 2192 2201 6UQJ 32500063 Crystal structure of the GH39 enzyme from Xanthomonas axonopodis pv. citri 2019-10-20 2020-07-22 de Morais, M.A.B.,Polo, C.C.,Domingues, M.N.,Persinoti, G.F.,Pirolla, R.A.S.,de Souza, F.H.M.,Correa, J.B.L.,Dos Santos, C.R.,Murakami, M.T. Exploring the Molecular Basis for Substrate Affinity and Structural Stability in Bacterial GH39 beta-Xylosidases. Front Bioeng Biotechnol 2020 8 419 419 6WIU Crystal structure of a beta-glucosidase from Exiguobacterium marinum 2020-04-10 2020-08-26 de Sousa, A.S.,de Melo, R.R.,Miyamoto, R.Y.,Morais, M.A.B.,Andrade, L.P.,Milan, N.,de Avila, M.C.,de Souza, C.M.,Adao, R.C.,Scarpassa, J.A.,Vieira, P.S.,dos Santos, L.V.,Ramos, C.H.I.,Murakami, M.T.,Zanphorlin, L.M. A rationally identified marine GH1 beta-glucosidase has distinguishing functional features for simultaneous saccharification and fermentation Biofuels, Bioprod Bioref 2020 0 0 0 6W0V 32817098 The Crystal Structure of the Mutant Nuclease Domain of Pyocin S8 with its Cognate Immunity Protein 2020-03-03 2020-09-02 Turano, H.,Gomes, F.,Domingos, R.M.,Degenhardt, M.F.S.,Oliveira, C.L.P.,Garratt, R.C.,Lincopan, N.,Netto, L.E.S. Molecular Structure and Functional Analysis of Pyocin S8 from Pseudomonas aeruginosa Reveals the Essential Requirement of a Glutamate Residue in the H-N-H Motif for DNase Activity. J.Bacteriol. 2020 202 0 0 6UNW 32876062 Epoxide hydrolase from an endophytic Streptomyces 2019-10-13 2020-09-16 Tormet-Gonzalez, G.D.,Wilson, C.,de Oliveira, G.S.,Dos Santos, J.C.,de Oliveira, L.G.,Dias, M.V.B. An epoxide hydrolase from endophytic Streptomyces shows unique structural features and wide biocatalytic activity. Acta Crystallogr D Struct Biol 2020 76 868 875 6UFV Crystal structure of the CBM3 from Bacillus subtilis at 1.06 angstrom resolution 2019-09-25 2020-09-30 Morais, M.A.B.,Paiva, J.H.,Murakami, M.T. Crystal structure of the CBM3 from Bacillus subtilis at 1.06 angstrom resolution To Be Published 0 0 0 0 6UFW Crystal structure of the CBM3 from Bacillus subtilis at 1.28 angstrom resolution 2019-09-25 2020-09-30 Morais, M.A.B.,Paiva, J.H.,Murakami, M.T. Crystal structure of the CBM3 from Bacillus subtilis at 1.28 angstrom resolution To Be Published 0 0 0 0 6X5X 32946987 Crystal structure o BmooMP-I, a P-I metalloproteinase from Bothrops moojeni 2020-05-27 2020-10-07 Salvador, G.H.M.,Borges, R.J.,Eulalio, M.M.C.,Dos Santos, L.D.,Fontes, M.R.M. Biochemical, pharmacological and structural characterization of BmooMP-I, a new P-I metalloproteinase from Bothrops moojeni venom. Biochimie 2020 179 54 64 6VLP 32947025 Hop phytocystatin in space group C2221 2020-01-24 2020-10-14 Moura, G.T.,Souza, A.A.,Garay, A.V.,Freitas, S.M.,Valadares, N.F. Crystal structure and physicochemical characterization of a phytocystatin from Humulus lupulus: Insights into its domain-swapped dimer Biochim Biophys Acta Proteins 2020 1869 140541 140541 6VLQ 32947025 Hop phytocystatin in space group P22121 2020-01-24 2020-10-14 Moura, G.T.,Souza, A.A.,Garay, A.V.,Freitas, S.M.,Valadares, N.F. Crystal structure and physicochemical characterization of a phytocystatin from Humulus lupulus: Insights into its domain-swapped dimer Biochim Biophys Acta Proteins 2020 1869 140541 140541 6UOD 33607531 Asparaginase II from Escherichia coli 2019-10-14 2020-10-21 de Araujo, T.S.,Scapin, S.M.N.,de Andrade, W.,Fasciotti, M.,de Magalhaes, M.T.Q.,Almeida, M.S.,Lima, L.M.T.R. Biophysical characterization of two commercially available preparations of the drug containing Escherichia coli L-Asparaginase 2. Biophys.Chem. 2021 271 106554 106554 6UOG 33607531 Asparaginase II from Escherichia coli 2019-10-14 2020-10-21 de Araujo, T.S.,Scapin, S.M.N.,de Andrade, W.,Fasciotti, M.,de Magalhaes, M.T.Q.,Almeida, M.S.,Lima, L.M.T.R. Biophysical characterization of two commercially available preparations of the drug containing Escherichia coli L-Asparaginase 2. Biophys.Chem. 2021 271 106554 106554 6UOH 33607531 Asparaginase II from Escherichia coli 2019-10-14 2020-10-21 de Araujo, T.S.,Scapin, S.M.N.,de Andrade, W.,Fasciotti, M.,de Magalhaes, M.T.Q.,Almeida, M.S.,Lima, L.M.T.R. Biophysical characterization of two commercially available preparations of the drug containing Escherichia coli L-Asparaginase 2. Biophys.Chem. 2021 271 106554 106554 7KEM Crystallographic structure of L,D-transpeptidase 2 from Mycobacterium tuberculosis 2020-10-11 2020-11-18 Libreros, G.A.,Dias, M.V.B. Crystallographic structure of L,D-transpeptidase 2 from Mycobacterium tuberculosis. To Be Published 0 0 0 0 6XEQ Crystal structure of the tetrameric 6-phosphogluconate dehydrogenase from Gluconobacter oxidans 2020-06-13 2020-12-02 Maturana, P.,Tobar-Calfucoy, E.,Fuentealba, M.,Roversi, P.,Garratt, R.,Cabrera, R. Crystal structure of the 6-phosphogluconate dehydrogenase from Gluconobacter oxydans reveals tetrameric 6PGDHs as the crucial intermediate in the evolution of structure and cofactor preference in the 6PGDH family [version 1; peer review: 1 approved, 1 approved with reservations] Wellcome Open Res 2021 6 0 0 6XN0 33446650 Crystal structure of GH43_1 enzyme from Xanthomonas citri 2020-07-02 2020-12-02 Morais, M.A.B.,Coines, J.,Domingues, M.N.,Pirolla, R.A.S.,Tonoli, C.C.C.,Santos, C.R.,Correa, J.B.L.,Gozzo, F.C.,Rovira, C.,Murakami, M.T. Two distinct catalytic pathways for GH43 xylanolytic enzymes unveiled by X-ray and QM/MM simulations. Nat Commun 2021 12 367 367 6XN1 33446650 Crystal structure of the GH43_1 enzyme from Xanthomonas citri complexed with xylose 2020-07-02 2020-12-02 Morais, M.A.B.,Coines, J.,Domingues, M.N.,Pirolla, R.A.S.,Tonoli, C.C.C.,Santos, C.R.,Correa, J.B.L.,Gozzo, F.C.,Rovira, C.,Murakami, M.T. Two distinct catalytic pathways for GH43 xylanolytic enzymes unveiled by X-ray and QM/MM simulations. Nat Commun 2021 12 367 367 6XN2 33446650 Crystal structure of the GH43_1 enzyme from Xanthomonas citri complexed with xylotriose 2020-07-02 2020-12-02 Morais, M.A.B.,Coines, J.,Domingues, M.N.,Pirolla, R.A.S.,Tonoli, C.C.C.,Santos, C.R.,Correa, J.B.L.,Gozzo, F.C.,Rovira, C.,Murakami, M.T. Two distinct catalytic pathways for GH43 xylanolytic enzymes unveiled by X-ray and QM/MM simulations. Nat Commun 2021 12 367 367 6VB8 Crystal structure of a lectin from Canavalia brasiliensis seed (ConBr) complexed with indole-3-acetic acid 2019-12-18 2020-12-23 Bezerra, E.H.S.,Sales, M.V.,Girao, M.S.,da Silva, F.M.S.,Queiroz, P.P.,Paiva, C.P.S.,Freire, V.N.,Rocha, B.A.M. Structural insights into phytohormone interaction to plant lectin ConBr To Be Published 0 0 0 0 6XIO 33839685 ADP-dependent kinase complex with fructose-6-phosphate and ADPbetaS 2020-06-20 2021-01-20 Munoz, S.M.,Castro-Fernandez, V.,Guixe, V. Structure of an ancestral ADP-dependent kinase with fructose-6P reveals key residues for binding, catalysis, and ligand-induced conformational changes. J.Biol.Chem. 2020 296 100219 100219 6VJ0 Crystal structure of a chitin-binding protein from Moringa oleifera seeds (Mo-CBP4) 2020-01-14 2021-01-27 Lopes, T.D.P.,Costa, H.P.S.,Pereira, M.L.,Neto, J.X.S.,de Alencar, N.M.N.,Vasconcelos, I.M.,Oliveira, J.T.A.,da Silva, F.M.S.,Freire, V.N.,Bezerra, E.H.S.,Rocha, B.A.M.,Sousa, D.O.B. Structural characterization of a lectin from Moringa oleifera seeds with imflammatory activities To Be Published 0 0 0 0 6V5F L-asparaginase from Escherichia coli 2019-12-04 2021-02-03 Souza, T.A.C.B.,Morais, S.B.,Morini, F.S.,Meissner, G.O. L-asparaginase from Escherichia coli: Novel insights about the behavior of flexible part of the active site To Be Published 0 0 0 0 6XQF 33556371 Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from family GH16, co-crystallized with 1,3-beta-D-cellotriosyl-glucose, presenting a 1,3-beta-D-cellobiosyl-glucose at active site 2020-07-09 2021-02-10 Liberato, M.V.,Teixeira Prates, E.,Goncalves, T.A.,Bernardes, A.,Vilela, N.,Fattori, J.,Ematsu, G.C.,Chinaglia, M.,Machi Gomes, E.R.,Migliorini Figueira, A.C.,Damasio, A.,Polikarpov, I.,Skaf, M.S.,Squina, F.M. Insights into the dual cleavage activity of the GH16 laminarinase enzyme class on beta-1,3 and beta-1,4 glycosidic bonds. J.Biol.Chem. 2021 296 100385 100385 6XQG 33556371 Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from family GH16, co-crystallized with 1,3-beta-D-cellobiosyl-cellobiose, presenting a 1,3-beta-D-cellobiosyl-glucose at active site 2020-07-09 2021-02-10 Liberato, M.V.,Teixeira Prates, E.,Goncalves, T.A.,Bernardes, A.,Vilela, N.,Fattori, J.,Ematsu, G.C.,Chinaglia, M.,Machi Gomes, E.R.,Migliorini Figueira, A.C.,Damasio, A.,Polikarpov, I.,Skaf, M.S.,Squina, F.M. Insights into the dual cleavage activity of the GH16 laminarinase enzyme class on beta-1,3 and beta-1,4 glycosidic bonds. J.Biol.Chem. 2021 296 100385 100385 6XQH 33556371 Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from family GH16, co-crystallized with cellotriose, presenting a 1,3-beta-D-cellobiosyl-glucose and a cellobiose at active site 2020-07-09 2021-02-10 Liberato, M.V.,Teixeira Prates, E.,Goncalves, T.A.,Bernardes, A.,Vilela, N.,Fattori, J.,Ematsu, G.C.,Chinaglia, M.,Machi Gomes, E.R.,Migliorini Figueira, A.C.,Damasio, A.,Polikarpov, I.,Skaf, M.S.,Squina, F.M. Insights into the dual cleavage activity of the GH16 laminarinase enzyme class on beta-1,3 and beta-1,4 glycosidic bonds. J.Biol.Chem. 2021 296 100385 100385 6XQL 33556371 Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from family GH16, co-crystallized with cellohexaose, presenting a 1,3-beta-D-cellobiosyl-glucose at active site 2020-07-09 2021-02-10 Liberato, M.V.,Teixeira Prates, E.,Goncalves, T.A.,Bernardes, A.,Vilela, N.,Fattori, J.,Ematsu, G.C.,Chinaglia, M.,Machi Gomes, E.R.,Migliorini Figueira, A.C.,Damasio, A.,Polikarpov, I.,Skaf, M.S.,Squina, F.M. Insights into the dual cleavage activity of the GH16 laminarinase enzyme class on beta-1,3 and beta-1,4 glycosidic bonds. J.Biol.Chem. 2021 296 100385 100385 6XQM 33556371 Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from family GH16, co-crystallized with laminarihexaose, presenting a laminaribiose and a glucose at active site 2020-07-09 2021-02-10 Liberato, M.V.,Teixeira Prates, E.,Goncalves, T.A.,Bernardes, A.,Vilela, N.,Fattori, J.,Ematsu, G.C.,Chinaglia, M.,Machi Gomes, E.R.,Migliorini Figueira, A.C.,Damasio, A.,Polikarpov, I.,Skaf, M.S.,Squina, F.M. Insights into the dual cleavage activity of the GH16 laminarinase enzyme class on beta-1,3 and beta-1,4 glycosidic bonds. J.Biol.Chem. 2021 296 100385 100385 7L07 33555078 Last common ancestor of HMPPK and PLK/HMPPK vitamin kinases 2020-12-11 2021-02-17 Gonzalez-Ordenes, F.,Bravo-Moraga, F.,Gonzalez, E.,Hernandez-Cabello, L.,Alzate-Morales, J.,Guixe, V.,Castro-Fernandez, V. Crystal structure and molecular dynamics simulations of a promiscuous ancestor reveal residues and an epistatic interaction involved in substrate binding and catalysis in the ATP-dependent vitamin kinase family members. Protein Sci. 2021 30 842 854 7LOT 33946041 Human PPAR Gamma LBD in Complex with Tetrazole Compound N-{3-[(4-methylbenzyl)oxy]benzyl}-2H-tetrazol-5-amine. 2021-02-10 2021-02-24 de Paula, K.,Santos, J.C.,Mafud, A.C.,Nascimento, A.S. Tetrazoles as PPAR gamma ligands: A structural and computational investigation. J.Mol.Graph.Model. 2021 106 107932 107932 6W29 34279922 Trypanosoma cruzi Malic Enzyme in complex with inhibitor (MEC013) 2020-03-05 2021-03-10 Mercaldi, G.F.,Eufrasio, A.G.,Ranzani, A.T.,do Nascimento Faria, J.,Mota, S.G.R.,Fagundes, M.,Bruder, M.,Cordeiro, A.T. Trypanosoma cruzi Malic Enzyme Is the Target for Sulfonamide Hits from the GSK Chagas Box. Acs Infect Dis. 2021 7 2455 2471 6W2N 34279922 Trypanosoma cruzi Malic Enzyme in complex with inhibitor (MEC009) 2020-03-06 2021-03-10 Mercaldi, G.F.,Eufrasio, A.G.,Ranzani, A.T.,do Nascimento Faria, J.,Mota, S.G.R.,Fagundes, M.,Bruder, M.,Cordeiro, A.T. Trypanosoma cruzi Malic Enzyme Is the Target for Sulfonamide Hits from the GSK Chagas Box. Acs Infect Dis. 2021 7 2455 2471 6W59 34279922 Trypanosoma cruzi Malic Enzyme in complex with inhibitor (MEC063) 2020-03-12 2021-03-17 Mercaldi, G.F.,Eufrasio, A.G.,Ranzani, A.T.,do Nascimento Faria, J.,Mota, S.G.R.,Fagundes, M.,Bruder, M.,Cordeiro, A.T. Trypanosoma cruzi Malic Enzyme Is the Target for Sulfonamide Hits from the GSK Chagas Box. Acs Infect Dis. 2021 7 2455 2471 6ZM0 34016967 Crystal structure of MreC from Pseudomonas aeruginosa 2020-07-01 2021-03-17 Martins, A.,Contreras-Martel, C.,Janet-Maitre, M.,Miyachiro, M.M.,Estrozi, L.F.,Trindade, D.M.,Malospirito, C.C.,Rodrigues-Costa, F.,Imbert, L.,Job, V.,Schoehn, G.,Attree, I.,Dessen, A. Self-association of MreC as a regulatory signal in bacterial cell wall elongation. Nat Commun 2021 12 2987 2987 6W49 34279922 Trypanosoma cruzi Malic Enzyme in complex with inhibitor (MEC010) 2020-03-10 2021-04-07 Mercaldi, G.F.,Eufrasio, A.G.,Ranzani, A.T.,do Nascimento Faria, J.,Mota, S.G.R.,Fagundes, M.,Bruder, M.,Cordeiro, A.T. Trypanosoma cruzi Malic Enzyme Is the Target for Sulfonamide Hits from the GSK Chagas Box. Acs Infect Dis. 2021 7 2455 2471 6W53 34279922 Trypanosoma cruzi Malic Enzyme in complex with inhibitor (MEC070) 2020-03-12 2021-04-07 Mercaldi, G.F.,Eufrasio, A.G.,Ranzani, A.T.,do Nascimento Faria, J.,Mota, S.G.R.,Fagundes, M.,Bruder, M.,Cordeiro, A.T. Trypanosoma cruzi Malic Enzyme Is the Target for Sulfonamide Hits from the GSK Chagas Box. Acs Infect Dis. 2021 7 2455 2471 6W56 34279922 Trypanosoma cruzi Malic Enzyme in complex with inhibitor (MEC062) 2020-03-12 2021-04-07 Mercaldi, G.F.,Eufrasio, A.G.,Ranzani, A.T.,do Nascimento Faria, J.,Mota, S.G.R.,Fagundes, M.,Bruder, M.,Cordeiro, A.T. Trypanosoma cruzi Malic Enzyme Is the Target for Sulfonamide Hits from the GSK Chagas Box. Acs Infect Dis. 2021 7 2455 2471 6W57 34279922 Trypanosoma cruzi Malic Enzyme in complex with inhibitor (MEC069) 2020-03-12 2021-04-07 Mercaldi, G.F.,Eufrasio, A.G.,Ranzani, A.T.,do Nascimento Faria, J.,Mota, S.G.R.,Fagundes, M.,Bruder, M.,Cordeiro, A.T. Trypanosoma cruzi Malic Enzyme Is the Target for Sulfonamide Hits from the GSK Chagas Box. Acs Infect Dis. 2021 7 2455 2471 6UMA 33989636 Crystal structure of the TRIM7 B30.2 domain at 1.6 angstrom resolution 2019-10-09 2021-04-14 Munoz Sosa, C.J.,Issoglio, F.M.,Carrizo, M.E. Crystal structure and mutational analysis of the human TRIM7 B30.2 domain provide insights into the molecular basis of its binding to glycogenin-1. J.Biol.Chem. 2021 296 100772 100772 6UMB 33989636 Crystal structure of TRIM7 B30.2 domain at 1.8 angstrom resolution 2019-10-09 2021-04-14 Munoz Sosa, C.J.,Issoglio, F.M.,Carrizo, M.E. Crystal structure and mutational analysis of the human TRIM7 B30.2 domain provide insights into the molecular basis of its binding to glycogenin-1. J.Biol.Chem. 2021 296 100772 100772 6WQ6 33857480 Xanthomonas citri Methionyl-tRNA synthetase in complex with methionine 2020-04-28 2021-04-21 Mercaldi, G.F.,Andrade, M.O.,Zanella, J.L.,Cordeiro, A.T.,Benedetti, C.E. Molecular basis for diaryldiamine selectivity and competition with tRNA in a type 2 methionyl-tRNA synthetase from a Gram-negative bacterium. J.Biol.Chem. 2021 296 100658 100658 6WQI 33857480 Xanthomonas citri Methionyl-tRNA synthetase (apo) 2020-04-28 2021-04-21 Mercaldi, G.F.,Andrade, M.O.,Zanella, J.L.,Cordeiro, A.T.,Benedetti, C.E. Molecular basis for diaryldiamine selectivity and competition with tRNA in a type 2 methionyl-tRNA synthetase from a Gram-negative bacterium. J.Biol.Chem. 2021 296 100658 100658 6WQS 33857480 Xanthomonas citri Methionyl-tRNA synthetase in complex with REP8839 2020-04-29 2021-04-21 Mercaldi, G.F.,Andrade, M.O.,Zanella, J.L.,Cordeiro, A.T.,Benedetti, C.E. Molecular basis for diaryldiamine selectivity and competition with tRNA in a type 2 methionyl-tRNA synthetase from a Gram-negative bacterium. J.Biol.Chem. 2021 296 100658 100658 6WQT 33857480 Xanthomonas citri Methionyl-tRNA synthetase in complex with REP3123 2020-04-29 2021-04-21 Mercaldi, G.F.,Andrade, M.O.,Zanella, J.L.,Cordeiro, A.T.,Benedetti, C.E. Molecular basis for diaryldiamine selectivity and competition with tRNA in a type 2 methionyl-tRNA synthetase from a Gram-negative bacterium. J.Biol.Chem. 2021 296 100658 100658 6WQW 32829841 Thermobacillus composti GH10 xylanase 2020-04-29 2021-04-28 Sepulchro, A.G.V.,Pellegrini, V.O.A.,Briganti, L.,de Araujo, E.A.,de Araujo, S.S.,Polikarpov, I. Transformation of xylan into value-added biocommodities using Thermobacillus composti GH10 xylanase. Carbohydr Polym 2020 247 116714 116714 7KCN 33956179 Reconstructed ancestor of HIUases and Transthyretins 2020-10-06 2021-05-19 Carrijo de Oliveira, L.,Figueiredo Costa, M.A.,Goncalves Pedersolli, N.,Heleno Batista, F.A.,Migliorini Figueira, A.C.,Salgado Ferreira, R.,Alves Pinto Nagem, R.,Alves Nahum, L.,Bleicher, L. Reenacting the Birth of a Function: Functional Divergence of HIUases and Transthyretins as Inferred by Evolutionary and Biophysical Studies. J.Mol.Evol. 2021 89 370 383 7KJJ 33956179 Reconstructed ancestor of HIUases and Transthyretins 2020-10-26 2021-05-19 Carrijo de Oliveira, L.,Figueiredo Costa, M.A.,Goncalves Pedersolli, N.,Heleno Batista, F.A.,Migliorini Figueira, A.C.,Salgado Ferreira, R.,Alves Pinto Nagem, R.,Alves Nahum, L.,Bleicher, L. Reenacting the Birth of a Function: Functional Divergence of HIUases and Transthyretins as Inferred by Evolutionary and Biophysical Studies. J.Mol.Evol. 2021 89 370 383 7LYE 33865953 Myotoxin I from Bothrops moojeni co-crystallized with synthetic inhibitor Varespladib (LY315920) 2021-03-06 2021-05-19 Salvador, G.H.M.,Borges, R.J.,Lomonte, B.,Lewin, M.R.,Fontes, M.R.M. The synthetic varespladib molecule is a multi-functional inhibitor for PLA 2 and PLA 2 -like ophidic toxins. Biochim Biophys Acta Gen Subj 2021 1865 129913 129913 7KMN Crystal structure of XAC1772, a GH35 xyloglucan-active beta-galactosidase from Xanthomonas citri 2020-11-03 2021-05-26 Vieira, P.S.,Bonfim, I.M.,Araujo, E.A.,Melo, R.R.,Lima, A.R.,Fessel, M.R.,Paixao, D.A.A.,Persinoti, G.F.,Rocco, S.A.,Lima, T.B.,Pirolla, R.A.S.,Morais, M.A.B.,Correa, J.B.L.,Zanphorlin, L.M.,Diogo, J.A.,Lima, E.A.,Grandis, A.,Buckeridge, M.S.,Gozzo, F.C.,Benedetti, C.E.,Polikarpov, I.,Giuseppe, P.O.,Murakami, M.T. Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors Nature Communications 2021 12 4049 0 7KMO Crystal structure of the GH35 beta-galactosidase (Xac1772) from Xanthomonas citri in complex with galactose 2020-11-03 2021-05-26 Vieira, P.S.,Bonfim, I.M.,Araujo, E.A.,Melo, R.R.,Lima, A.R.,Fessel, M.R.,Paixao, D.A.A.,Persinoti, G.F.,Rocco, S.A.,Lima, T.B.,Pirolla, R.A.S.,Morais, M.A.B.,Correa, J.B.L.,Zanphorlin, L.M.,Diogo, J.A.,Lima, E.A.,Grandis, A.,Buckeridge, M.S.,Gozzo, F.C.,Benedetti, C.E.,Polikarpov, I.,Giuseppe, P.O.,Murakami, M.T. Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors Nature Communications 2021 12 4049 0 7KMP Crystal structure of the GH31 alpha-xylosidase (Xac1773) from Xanthomonas citri 2020-11-03 2021-05-26 Vieira, P.S.,Bonfim, I.M.,Araujo, E.A.,Melo, R.R.,Lima, A.R.,Fessel, M.R.,Paixao, D.A.A.,Persinoti, G.F.,Rocco, S.A.,Lima, T.B.,Pirolla, R.A.S.,Morais, M.A.B.,Correa, J.B.L.,Zanphorlin, L.M.,Diogo, J.A.,Lima, E.A.,Grandis, A.,Buckeridge, M.S.,Gozzo, F.C.,Benedetti, C.E.,Polikarpov, I.,Giuseppe, P.O.,Murakami, M.T. Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors Nature Communications 2021 12 4049 0 7KMQ Crystal structure of the GH95 alpha-L-1,2-fucosidase (Xac1774) from Xanthomonas citri 2020-11-03 2021-05-26 Vieira, P.S.,Bonfim, I.M.,Araujo, E.A.,Melo, R.R.,Lima, A.R.,Fessel, M.R.,Paixao, D.A.A.,Persinoti, G.F.,Rocco, S.A.,Lima, T.B.,Pirolla, R.A.S.,Morais, M.A.B.,Correa, J.B.L.,Zanphorlin, L.M.,Diogo, J.A.,Lima, E.A.,Grandis, A.,Buckeridge, M.S.,Gozzo, F.C.,Benedetti, C.E.,Polikarpov, I.,Giuseppe, P.O.,Murakami, M.T. Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors Nature Communications 2021 12 4049 0 7KN8 Crystal structure of the GH74 xyloglucanase from Xanthomonas campestris (Xcc1752) 2020-11-04 2021-05-26 Vieira, P.S.,Bonfim, I.M.,Araujo, E.A.,Melo, R.R.,Lima, A.R.,Fessel, M.R.,Paixao, D.A.A.,Persinoti, G.F.,Rocco, S.A.,Lima, T.B.,Pirolla, R.A.S.,Morais, M.A.B.,Correa, J.B.L.,Zanphorlin, L.M.,Diogo, J.A.,Lima, E.A.,Grandis, A.,Buckeridge, M.S.,Gozzo, F.C.,Benedetti, C.E.,Polikarpov, I.,Giuseppe, P.O.,Murakami, M.T. Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors Nature Communications 2021 12 4049 0 7KNC Crystal structure of the GH31 alpha-xylosidase (Xac1773) from Xanthomonas citri 2020-11-04 2021-05-26 Vieira, P.S.,Bonfim, I.M.,Araujo, E.A.,Melo, R.R.,Lima, A.R.,Fessel, M.R.,Paixao, D.A.A.,Persinoti, G.F.,Rocco, S.A.,Lima, T.B.,Pirolla, R.A.S.,Morais, M.A.B.,Correa, J.B.L.,Zanphorlin, L.M.,Diogo, J.A.,Lima, E.A.,Grandis, A.,Buckeridge, M.S.,Gozzo, F.C.,Benedetti, C.E.,Polikarpov, I.,Giuseppe, P.O.,Murakami, M.T. Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors Nature Communications 2021 12 4049 0 6WPX Crystal structure of Bacillus licheniformis lipase BlEst2 in propetide form 2020-04-28 2021-06-09 Nakamura, A.M.,Godoy, A.S.,Kadowaki, M.A.S.,Polikarpov, I. The first structure of Bacillus licheniformis lipase BlEst2 in its propeptide and mature form revealing molecular details of inhibition by its C-terminal domains To Be Published 0 0 0 0 6WPY Crystal structure of Bacillus licheniformis lipase BlEst2 in mature form 2020-04-28 2021-06-09 Nakamura, A.M.,Godoy, A.S.,Kadowaki, M.A.S.,Polikarpov, I. The first structure of Bacillus licheniformis lipase BlEst2 in its propeptide and mature form revealing molecular details of inhibition by its C-terminal domains To Be Published 0 0 0 0 6XAT 37199668 Crystal structure of the human FoxP4 DNA binding Domain 2020-06-04 2021-06-09 Villalobos, P.,Carvajal, A.I.,Castro-Fernandez, V.,Babul, J.,Ramirez-Sarmiento, C.A.,Medina, E. Unraveling the folding and dimerization properties of the human FoxP subfamily of transcription factors. Febs Lett. 2023 597 1894 1905 6WBA 34195786 Structure of Mouse Importin alpha MLH1- R470A NLS Peptide Complex 2020-03-26 2021-07-07 de Oliveira, H.C.,da Silva, T.D.,Salvador, G.H.M.,Moraes, I.R.,Fukuda, C.A.,de Barros, A.C.,Fontes, M.R.M. Structural and calorimetric studies reveal specific determinants for the binding of a high-affinity NLS to mammalian importin-alpha. Biochem.J. 2021 478 2715 2732 6WBB 34195786 Structure of Mouse Importin alpha - MLH1-E475A NLS peptide complex 2020-03-26 2021-07-07 de Oliveira, H.C.,da Silva, T.D.,Salvador, G.H.M.,Moraes, I.R.,Fukuda, C.A.,de Barros, A.C.,Fontes, M.R.M. Structural and calorimetric studies reveal specific determinants for the binding of a high-affinity NLS to mammalian importin-alpha. Biochem.J. 2021 478 2715 2732 6WBC 34195786 Structure of Mouse Importin alpha- MLH1-R472K NLS Peptide Complex 2020-03-26 2021-07-07 de Oliveira, H.C.,da Silva, T.D.,Salvador, G.H.M.,Moraes, I.R.,Fukuda, C.A.,de Barros, A.C.,Fontes, M.R.M. Structural and calorimetric studies reveal specific determinants for the binding of a high-affinity NLS to mammalian importin-alpha. Biochem.J. 2021 478 2715 2732 7M60 34195786 Structure of Mouse Importin alpha MLH1-S467A NLS Peptide Complex 2021-03-25 2021-07-07 de Oliveira, H.C.,da Silva, T.D.,Salvador, G.H.M.,Moraes, I.R.,Fukuda, C.A.,de Barros, A.C.,Fontes, M.R.M. Structural and calorimetric studies reveal specific determinants for the binding of a high-affinity NLS to mammalian importin-alpha. Biochem.J. 2021 478 2715 2732 7BK8 34115884 X-ray crystal structure of Pseudomonas aeruginosa MagC 2021-01-15 2021-07-21 Zouhir, S.,Contreras-Martel, C.,Maragno Trindade, D.,Attree, I.,Dessen, A.,Macheboeuf, P. MagC is a NplC/P60-like member of the alpha-2-macroglobulin Mag complex of Pseudomonas aeruginosa that interacts with peptidoglycan. Febs Lett. 2021 595 2034 2046 7L1W 34232504 Unlocking the structural features for the exo-xylobiosidase activity of an unusual GH11 member identified in a compost-derived consortium 2020-12-15 2021-07-28 Kadowaki, M.A.S.,Briganti, L.,Evangelista, D.E.,Echevarria-Poza, A.,Tryfona, T.,Pellegrini, V.O.A.,Nakayama, D.G.,Dupree, P.,Polikarpov, I. Unlocking the structural features for the xylobiohydrolase activity of an unusual GH11 member identified in a compost-derived consortium. Biotechnol.Bioeng. 2021 118 4052 4064 7L1Y 34232504 Unlocking the structural features for the exo-xylobiosidase activity of an unusual GH11 member identified in a compost-derived consortium-xylobiose complex 2020-12-15 2021-07-28 Kadowaki, M.A.S.,Briganti, L.,Evangelista, D.E.,Echevarria-Poza, A.,Tryfona, T.,Pellegrini, V.O.A.,Nakayama, D.G.,Dupree, P.,Polikarpov, I. Unlocking the structural features for the xylobiohydrolase activity of an unusual GH11 member identified in a compost-derived consortium. Biotechnol.Bioeng. 2021 118 4052 4064 7L1Z 34232504 Unlocking the structural features for the exo-xylobiosidase activity of an unusual GH11 member identified in a compost-derived consortium - NT-truncated form 2020-12-15 2021-08-04 Kadowaki, M.A.S.,Briganti, L.,Evangelista, D.E.,Echevarria-Poza, A.,Tryfona, T.,Pellegrini, V.O.A.,Nakayama, D.G.,Dupree, P.,Polikarpov, I. Unlocking the structural features for the xylobiohydrolase activity of an unusual GH11 member identified in a compost-derived consortium. Biotechnol.Bioeng. 2021 118 4052 4064 7LKM 34398935 The PilB(N-terminal_P70S mutant)-PilZ complex of the Type IV pilus from Xanthomonas citri 2021-02-02 2021-08-11 Llontop, E.E.,Cenens, W.,Favaro, D.C.,Sgro, G.G.,Salinas, R.K.,Guzzo, C.R.,Farah, C.S. The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri. Plos Pathog. 2021 17 0 0 7LKN 34398935 The PilB(N-terminal_P70S mutant)-PilZ complex (SeMet) 2021-02-02 2021-08-11 Llontop, E.E.,Cenens, W.,Favaro, D.C.,Sgro, G.G.,Salinas, R.K.,Guzzo, C.R.,Farah, C.S. The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri. Plos Pathog. 2021 17 0 0 7JVH Crystal structure of a GH43_12 retrieved from capybara gut metagenome 2020-08-21 2021-09-08 Cabral, L.,Domingues, M.N.,Martins, M.P.,Persinoti, G.F.,Morais, M.A.B.,Murakami, M.T. Crystal structure of a GH43_12 retrieved from capybara gut metagenome To Be Published 0 0 0 0 7LLE Crystal structure of GenB4 in complex with PLP 2021-02-03 2021-09-22 Bury, P.S.,Huang, F.,Leadlay, P.F.,Dias, M.V.B. Crystal structure of GenB4 in complex with external aldimine of PLP-sisomicin Acs Catalysis 2021 0 0 0 7LM0 Crystal structure of GenB3 in complex with PLP 2021-02-04 2021-09-22 Bury, P.S.,Huang, F.,Leadlay, P.F.,Dias, M.V.B. Crystal structure of GenB4 in complex with external aldimine of PLP-sisomicin Acs Catalysis 2021 0 0 0 7KV0 33815691 Crystallographic structure of Paenibacillus xylanivorans GH11 2020-11-26 2021-09-29 Briganti, L.,Capetti, C.,Pellegrini, V.O.A.,Ghio, S.,Campos, E.,Nascimento, A.S.,Polikarpov, I. Structural and molecular dynamics investigations of ligand stabilization via secondary binding site interactions in Paenibacillus xylanivorans GH11 xylanase. Comput Struct Biotechnol J 2021 19 1557 1566 7K1R X-ray Structure of an Enterobacter GH43 Beta-Xylosidase: EcXyl43 F507A mutant 2020-09-08 2021-11-10 Briganti, L.,Capetti, C.C.M.,Polikarpov, I. X-ray Structure of an Enterobacter GH43 Beta-Xylosidase: EcXyl43 F507A mutant To Be Published 0 0 0 0 7KUU LsfA from P. aeruginosa, a 1-Cys Prx in Sulfonic acid form 2020-11-25 2021-12-15 AIeixo-Silva, R.L.,Domingos, R.M.,Netto, L.E.S. Structure of LsfA, a 1-Cys Prx in sulfonic acid form To Be Published 0 0 0 0 7RJI 34547312 BthTX-II variant b, from Bothrops jararacussu venom, complexed with stearic acid 2021-07-21 2022-01-05 Borges, R.J.,Salvador, G.H.M.,Campanelli, H.B.,Pimenta, D.C.,de Oliveira Neto, M.,Uson, I.,Fontes, M.R.M. BthTX-II from Bothrops jararacussu venom has variants with different oligomeric assemblies: An example of snake venom phospholipases A 2 versatility. Int.J.Biol.Macromol. 2021 191 255 266 7M6C Crystal structure of PLA2 from snake venom of peruvian Bothrops atrox 2021-03-25 2022-01-12 Chojnowski, G.,Simpkin, A.,Leonardo, D.A.,Seifert-Davila, W.,Vivas-Ruiz, D.E.,Keegan, R.,Rigden, D. findMySequence: a neural-network-based approach for identification of unknown proteins in X-ray crystallography and cryo-EM Iucrj 2022 9 86 97 7KW6 33910709 Crystal structure of the BlCel48B from Bacillus licheniformis 2020-11-30 2022-01-19 Araujo, E.A.,Dias, A.H.S.,Kadowaki, M.A.S.,Piyadov, V.,Pellegrini, V.O.A.,Urio, M.B.,Ramos, L.P.,Skaf, M.S.,Polikarpov, I. Impact of cellulose properties on enzymatic degradation by bacterial GH48 enzymes: Structural and mechanistic insights from processive Bacillus licheniformis Cel48B cellulase. Carbohydr Polym 2021 264 118059 118059 7M11 L-asparaginase from Escherichia coli with bound Aspartic acid 2021-03-11 2022-03-16 Souza, T.A.C.B.,Morais, S.B.,Morini, F.S.,Meissner, G.O. L-asparaginase from Escherichia coli: Novel insights about the behavior of flexible part of the active site To Be Published 0 0 0 0 7T7Y 35378128 The crystal structure of family 8 carbohydrate-binding module from Dictyostelium discoideum complexed with iodine atoms 2021-12-15 2022-04-20 Liberato, M.V.,Campos, B.M.,Tomazetto, G.,Crouch, L.I.,Garcia, W.,Zeri, A.C.M.,Bolam, D.N.,Squina, F.M. Unique properties of a Dictyostelium discoideum carbohydrate-binding module expand our understanding of CBM-ligand interactions. J.Biol.Chem. 2022 298 101891 101891 7T7Z 35378128 The crystal structure of family 8 carbohydrate-binding module from Dictyostelium discoideum 2021-12-15 2022-04-20 Liberato, M.V.,Campos, B.M.,Tomazetto, G.,Crouch, L.I.,Garcia, W.,Zeri, A.C.M.,Bolam, D.N.,Squina, F.M. Unique properties of a Dictyostelium discoideum carbohydrate-binding module expand our understanding of CBM-ligand interactions. J.Biol.Chem. 2022 298 101891 101891 7R8Y Ancestral protein AncThEn of Phosphomethylpyrimidine kinases family 2021-06-27 2022-06-29 Munoz, S.,Maturana, P.,Gonzalez-Ordenes, F.,Cea, P.,Castro-Fernandez, V. Ancestral protein AncThEn of Phosphomethylpyrimidine Kinases family To Be Published 0 0 0 0 7R8Z Ancestral protein AncEn of Phosphomethylpyrimidine kinases family 2021-06-27 2022-06-29 Munoz, S.,Maturana, P.,Gonzalez-Ordenes, F.,Cea, P.,Castro-Fernandez, V. Ancestral protein AncEn of Phosphomethylpyrimidine Kinases family To Be Published 0 0 0 0 8DAX 36077258 New insights into the P186 flip and oligomeric state of Staphylococcus aureus exfoliative toxin E: implications for the exfoliative mechanism 2022-06-14 2022-11-02 Gismene, C.,Hernandez Gonzalez, J.E.,Santisteban, A.R.N.,Ziem Nascimento, A.F.,Dos Santos Cunha, L.,de Moraes, F.R.,de Oliveira, C.L.P.,Oliveira, C.C.,Jocelan Scarin Provazzi, P.,Pascutti, P.G.,Arni, R.K.,Barros Mariutti, R. Staphylococcus aureus Exfoliative Toxin E, Oligomeric State and Flip of P186: Implications for Its Action Mechanism. Int J Mol Sci 2022 23 0 0 7SX1 human triosephosphate isomerase mutant v154m 2021-11-22 2022-11-30 Romero, J.M. human triosephosphate isomerase mutant v154m To Be Published 0 0 0 0 7T0Q human triosephosphate isomerase mutant v154m 2021-11-30 2022-12-14 Romero, J.M. human triosephosphate isomerase mutant v154m To Be Published 0 0 0 0 8DC1 Structural and biochemical characterization of L. interrogans Lsa45 reveals a penicillin-binding protein with esterase activity 2022-06-15 2023-01-11 Santos, J.C.,Handa, S.,Fernandes, L.G.V.,Bleicher, L.,Gandin, C.A.,de Oliveira-Neto, M.,Ghosh, P.,Nascimento, A.L.T.O. Structural and biochemical characterization of Leptospira interrogans Lsa45 reveals a penicillin-binding protein with esterase activity Process Biochem 2023 125 141 153 8FC0 36758494 Crystal structure of a metagenome-derived GH5 endo-beta-1,4-glucanase 2022-12-01 2023-03-15 Pimentel, A.C.,Liberato, M.V.,Franco Cairo, J.P.L.,Tomazetto, G.,Gandin, C.A.,de Oliveira Neto, M.,Alvarez, T.M.,Squina, F.M. Structural and functional insights of the catalytic GH5 and Calx-beta domains from the metagenome-derived endoglucanase CelE2. Enzyme.Microb.Technol. 2023 165 110206 110206 7UN2 Crystal structure of a lectin from Canavalia maritima seed (ConM) complexed with Indole-3-butyric acid 2022-04-08 2023-04-19 de Sousa, J.P.,Bezerra, E.H.S.,Sales, M.V.,Queiroz, P.P.,da Silva, F.M.S.,Carvalho, C.P.S.,Freire, V.N.,Rocha, B.A.M. Structural analysis of Canavalia maritima lectin complexed with auxins To Be Published 0 0 0 0 7UOD Crystal structure of a lectin from Canavalia maritima seed (ConM) complexed with 2,4-dichloro-phenoxyacetic acid 2022-04-12 2023-04-19 Sousa, J.P.,Bezerra, E.H.S.,Sales, M.V.,Queiroz, P.P.,da Silva, F.M.S.,Carvalho, C.P.S.,Freire, V.N.,Rocha, B.A.M. Structural analysis of Canavalia maritima lectin complexed with auxins To Be Published 0 0 0 0 7UXV human triosephosphate isomerase mutant G122R 2022-05-06 2023-05-10 Romero, J.M. human triosephosphate isomerase mutant G122R To Be Published 0 0 0 0 7UXB Human triosephosphate isomerase mutant G122R 2022-05-05 2023-05-24 Romero, J.M. Human triosephosphate isomerase mutant G122R To Be Published 0 0 0 0 7TMX 38065227 Structure of Mouse Importin alpha NEIL1 NLS Peptide Complex 2022-01-20 2023-08-02 Moraes, I.R.,de Oliveira, H.C.,Fontes, M.R.M. Structural basis of nuclear transport for NEIL DNA glycosylases mediated by importin-alpha. Biochim Biophys Acta Proteins 2023 1872 140974 140974 7TMY 38065227 Structure of Mouse Importin alpha NEIL3 NLS Peptide Complex 2022-01-20 2023-08-02 Moraes, I.R.,de Oliveira, H.C.,Fontes, M.R.M. Structural basis of nuclear transport for NEIL DNA glycosylases mediated by importin-alpha. Biochim Biophys Acta Proteins 2023 1872 140974 140974 8DND 36403756 Crystal structure of Bothrops pirajai Piratoxin-I (PrTX-I) and synthetic inhibitor Varespladib (LY315920) 2022-07-11 2023-08-02 Salvador, G.H.M.,Pinto, E.K.R.,Ortolani, P.L.,Fortes-Dias, C.L.,Cavalcante, W.L.G.,Soares, A.M.,Lomonte, B.,Lewin, M.R.,Fontes, M.R.M. Structural basis of the myotoxic inhibition of the Bothrops pirajai PrTX-I by the synthetic varespladib. Biochimie 2023 207 1 10 8SZO 28693997 Canavalia villosa lectin in complex with alpha-methyl-mannoside 2023-05-30 2023-09-27 Lossio, C.F.,Moreira, C.G.,Amorim, R.M.F.,Nobre, C.S.,Silva, M.T.L.,Neto, C.C.,Pinto-Junior, V.R.,Silva, I.B.,Campos, J.,Assreuy, A.M.S.,Cavada, B.S.,Nascimento, K.S. Lectin from Canavalia villosa seeds: A glucose/mannose-specific protein and a new tool for inflammation studies. Int J Biol Macromol 2017 105 272 280 7UMJ 37301421 Crystal structure of recombinant Solieria filiformis lectin (rSfL) 2022-04-07 2023-10-11 Chaves, R.P.,Dos Santos, A.K.B.,Andrade, A.L.,Pinheiro, A.A.,Silva, J.M.S.,da Silva, F.M.S.,de Sousa, J.P.,Barroso Neto, I.L.,Bezerra, E.H.S.,Abreu, J.O.,de Carvalho, F.C.T.,de Sousa, O.V.,de Sousa, B.L.,da Rocha, B.A.M.,Silva, A.L.C.,do Nascimento Neto, L.G.,de Vasconcelos, M.A.,Teixeira, E.H.,Carneiro, R.F.,Sampaio, A.H.,Nagano, C.S. Structural study and antimicrobial and wound healing effects of lectin from Solieria filiformis (Kutzing) P.W.Gabrielson. Biochimie 2023 214 61 76 8UX7 Dioclea megacarpa lectin (DmegA) complexed with X-Man 2023-11-09 2023-11-29 Oliveira, M.V.,De Sloover, G.,Osterne, V.J.S.,Pinto-Junior, V.R.,Sacramento-Neto, J.C.,Van Damme, E.J.M.,Nascimento, K.S.,Cavada, B.S. Dioclea megacarpa lectin (DmegA) complexed with X-Man To Be Published 0 0 0 0 8UW4 Crystal structure of hydroxyisourate hydrolase from Herbaspirillum seropedicae 2023-11-06 2024-01-31 Magalhaes, M.T.Q.,Pereira, H.M.,Bleicher, L. Crystal structure of hydroxyisourate hydrolase from Herbaspirillum seropedicae To Be Published 0 0 0 0 8T9W 38280177 Crystal structure of a GH140 apiosidase derived from a lignocellulolytic enriched mangrove metagenome. 2023-06-26 2024-02-07 Liberato, M.V.,Paixao, D.A.A.,Tomazetto, G.,Ndeh, D.,Bolam, D.N.,Squina, F.M. Discovery, structural characterization, and functional insights into a novel apiosidase from the GH140 family, isolated from a lignocellulolytic-enriched mangrove microbial community. Biotechnol.Lett. 2024 46 201 211 8U49 38286536 The Apo Crystal Structure of BlCel9A from Glycoside Hydrolase Family 9 2023-09-10 2024-02-14 de Araujo, E.A.,Cortez, A.A.,Pellegrini, V.O.A.,Vacilotto, M.M.,Cruz, A.F.,Batista, P.R.,Polikarpov, I. Molecular mechanism of cellulose depolymerization by the two-domain BlCel9A enzyme from the glycoside hydrolase family 9. Carbohydr Polym 2024 329 121739 121739 8U4A 38286536 Crystal Structure of BlCel9A from Glycoside Hydrolase Family 9 in Complex with Cellotriose 2023-09-10 2024-02-14 de Araujo, E.A.,Cortez, A.A.,Pellegrini, V.O.A.,Vacilotto, M.M.,Cruz, A.F.,Batista, P.R.,Polikarpov, I. Molecular mechanism of cellulose depolymerization by the two-domain BlCel9A enzyme from the glycoside hydrolase family 9. Carbohydr Polym 2024 329 121739 121739 8U4F 38286536 Crystal Structure of BlCel9A from Glycoside Hydrolase Family 9 in Complex with Cellohexaose 2023-09-10 2024-02-14 de Araujo, E.A.,Cortez, A.A.,Pellegrini, V.O.A.,Vacilotto, M.M.,Cruz, A.F.,Batista, P.R.,Polikarpov, I. Molecular mechanism of cellulose depolymerization by the two-domain BlCel9A enzyme from the glycoside hydrolase family 9. Carbohydr Polym 2024 329 121739 121739