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Proc.Natl.Acad.Sci.Usa 2005 102 4596 4601 2BO9 HUMAN CARBOXYPEPTIDASE A4 IN COMPLEX WITH HUMAN LATEXIN. 2005-04-08 2005-04-15 Pallares, I.,Bonet, R.,Garcia-Castellanos, R.,Ventura, S.,Aviles, F.X.,Vendrell, J.,Gomis-Ruth, F.X. Structure of human carboxypeptidase A4 with its endogenous protein inhibitor, latexin. Proc.Natl.Acad.Sci.Usa 2005 102 3978 3983 1U3A mutant DsbA 2004-07-21 2005-05-03 Ondo-Mbele, E.,Vives, C.,Kone, A.,Serre, L. Intriguing conformation changes associated with the trans/cis isomerization of a prolyl residue in the active site of the DsbA C33A mutant J.Mol.Biol. 2005 347 555 563 2BKI MYOSIN VI NUCLEOTIDE-FREE (MDINSERT2-IQ) CRYSTAL STRUCTURE 2005-02-16 2005-06-07 Menetrey, J.,Bahloul, A.,Wells, A.L.,Yengo, C.M.,Morris, C.A.,Sweeney, H.L.,Houdusse, A. The structure of the myosin VI motor reveals the mechanism of directionality reversal. Nature 2005 435 779 785 1YZ7 Crystal structure of a C-terminal segment of the alpha subunit of aIF2 from Pyrococcus abyssi 2005-02-28 2005-06-28 Yatime, L.,Schmitt, E.,Blanquet, S.,Mechulam, Y. Structure-Function Relationships of the Intact aIF2alpha Subunit from the Archaeon Pyrococcus abyssi Biochemistry 2005 44 8749 8756 1ZCD Crystal structure of the Na+/H+ antiporter NhaA 2005-04-11 2005-07-05 Hunte, C.,Screpanti, E.,Venturi, M.,Rimon, A.,Padan, E.,Michel, H. Structure of a Na+/H+ antiporter and insights into mechanism of action and regulation by pH. Nature 2005 435 1197 1202 2BMU UMP KINASE FROM PYROCOCCUS FURIOSUS COMPLEXED WITH ITS SUBSTRATE UMP AND ITS SUBSTRATE ANALOG AMPPNP 2005-03-15 2005-07-25 Marco-Marin, C.,Gil-Ortiz, F.,Rubio, V. The crystal structure of Pyrococcus furiosus UMP kinase provides insight into catalysis and regulation in microbial pyrimidine nucleotide biosynthesis. J.Mol.Biol. 2005 352 438 454 2BOO THE CRYSTAL STRUCTURE OF URACIL-DNA N-GLYCOSYLASE (UNG) FROM DEINOCOCCUS RADIODURANS. 2005-04-13 2005-07-27 Leiros, I.,Moe, E.,Smalas, A.O.,McSweeney, S. Structure of the uracil-DNA N-glycosylase (UNG) from Deinococcus radiodurans. Acta Crystallogr.,Sect.D 2005 61 1049 1056 1XTZ Crystal structure of the S. cerevisiae D-ribose-5-phosphate isomerase: comparison with the archeal and bacterial enzymes 2004-10-25 2005-08-30 Graille, M.,Meyer, P.,Leulliot, N.,Sorel, I.,Janin, J.,Van Tilbeurgh, H.,Quevillon-Cheruel, S. Crystal structure of the S. cerevisiae D-ribose-5-phosphate isomerase: comparison with the archaeal and bacterial enzymes Biochimie 2005 87 763 769 2BVY THE STRUCTURE AND CHARACTERIZATION OF A MODULAR ENDO-BETA-1,4-MANNANASE FROM CELLULOMONAS FIMI 2005-06-09 2005-09-26 Le Nours, J.,Anderson, L.,Stoll, D.,Stalbrand, H.,Lo Leggio, L. The structure and characterization of a modular endo-beta-1,4-mannanase from Cellulomonas fimi. Biochemistry 2005 44 12700 12708 2B43 Crystal structure of the Norwalk virus RNA dependent RNA polymerase from strain Hu/NLV/Dresden174/1997/GE 2005-09-22 2005-10-04 Hogbom, M.,Rohayem, J.,Unge, T.,Jones, T.A. Crystal structure of the Norwalk virus RNA dependent RNA polymerase from strain Hu/NLV/Dresden174/1997/GE To be Published 0 0 0 0 2C31 CRYSTAL STRUCTURE OF OXALYL-COA DECARBOXYLASE IN COMPLEX WITH THE COFACTOR DERIVATIVE THIAMIN-2-THIAZOLONE DIPHOSPHATE AND ADENOSINE DIPHOSPHATE 2005-10-03 2005-10-07 Berthold, C.L.,Moussatche, P.,Richards, N.G.,Lindqvist, Y. Structural basis for activation of the thiamin diphosphate-dependent enzyme oxalyl-CoA decarboxylase by adenosine diphosphate. J.Biol.Chem. 2005 280 41645 41654 2BX2 CATALYTIC DOMAIN OF E. COLI RNASE E 2005-07-21 2005-10-14 Callaghan, A.J.,Marcaida, M.J.,Stead, J.A.,Mcdowall, K.J.,Scott, W.G.,Luisi, B.F. Structure of E. Coli Rnase E Catalytic Domain and Implications for RNA Processing and Turnover Nature 2005 437 1187 0 2C0B CATALYTIC DOMAIN OF E. COLI RNASE E IN COMPLEX WITH 13-MER RNA 2005-08-30 2005-10-14 Callaghan, A.J.,Marcaida, M.J.,Stead, J.A.,Mcdowall, K.J.,Scott, W.G.,Luisi, B.F. Structure of E. Coli Rnase E Catalytic Domain and Implications for RNA Processing and Turnover Nature 2005 437 1187 0 2BRY CRYSTAL STRUCTURE OF THE NATIVE MONOOXYGENASE DOMAIN OF MICAL AT 1.45 A RESOLUTION 2005-03-16 2005-10-26 Siebold, C.,Berrow, N.,Walter, T.S.,Harlos, K.,Owens, R.J.,Stuart, D.I.,Terman, J.R.,Kolodkin, A.L.,Pasterkamp, R.J.,Jones, E.Y. High-resolution structure of the catalytic region of MICAL (molecule interacting with CasL), a multidomain flavoenzyme-signaling molecule. Proc.Natl.Acad.Sci.Usa 2005 102 16836 16841 2C1J MOLECULAR BASIS FOR THE RECOGNITION OF PHOSPHORYLATED AND PHOSPHOACETYLATED HISTONE H3 BY 14-3-3 2005-09-13 2005-11-02 Macdonald, N.,Welburn, J.P.,Noble, M.E.,Nguyen, A.,Yaffe, M.B.,Clynes, D.,Moggs, J.G.,Orphanides, G.,Thomson, S.,Edmunds, J.W.,Clayton, A.L.,Endicott, J.A.,Mahadevan, L.C. Molecular basis for the recognition of phosphorylated and phosphoacetylated histone h3 by 14-3-3. Mol.Cell 2005 20 199 211 2C1N MOLECULAR BASIS FOR THE RECOGNITION OF PHOSPHORYLATED AND PHOSPHOACETYLATED HISTONE H3 BY 14-3-3 2005-09-15 2005-11-02 Macdonald, N.,Welburn, J.P.,Noble, M.E.,Nguyen, A.,Yaffe, M.B.,Clynes, D.,Moggs, J.G.,Orphanides, G.,Thomson, S.,Edmunds, J.W.,Clayton, A.L.,Endicott, J.A.,Mahadevan, L.C. Molecular basis for the recognition of phosphorylated and phosphoacetylated histone h3 by 14-3-3. Mol.Cell 2005 20 199 211 2BT8 STRUCTURE OF THE C-TERMINAL RECEPTOR-BINDING DOMAIN OF AVIAN REOVIRUS FIBRE SIGMAC, SPACE GROUP P6322. 2005-05-19 2005-11-03 Guardado Calvo, P.,Fox, G.C.,Hermo Parrado, X.L.,Llamas-Saiz, A.L.,Costas, C.,Martinez-Costas, J.,Benavente, J.,van Raaij, M.J. Structure of the carboxy-terminal receptor-binding domain of avian reovirus fibre sigmaC. J.Mol.Biol. 2005 354 137 149 1Y4M Crystal structure of human endogenous retrovirus HERV-FRD envelope protein (syncitin-2) 2004-12-01 2005-11-15 Renard, M.,Varela, P.F.,Letzelter, C.,Duquerroy, S.,Rey, F.A.,Heidmann, T. Crystal structure of a pivotal domain of human syncytin-2, a 40 million years old endogenous retrovirus fusogenic envelope gene captured by primates. J.Mol.Biol. 2005 352 1029 1034 2B8Q X-ray structure of Acanthamoeba ployphaga mimivirus nucleoside diphosphate kinase complexed with TDP 2005-10-10 2005-11-15 Jeudy, S.,Claverie, J.M.,Abergel, C. Crystal structure and biochemical characterization of the Acanthamoeba polyphaga mimivirus NDK To be Published 0 0 0 0 2C2L CRYSTAL STRUCTURE OF THE CHIP U-BOX E3 UBIQUITIN LIGASE 2005-09-29 2005-11-23 Zhang, M.,Windheim, M.,Roe, S.M.,Peggie, M.,Cohen, P.,Prodromou, C.,Pearl, L.H. Chaperoned ubiquitylation--crystal structures of the CHIP U box E3 ubiquitin ligase and a CHIP-Ubc13-Uev1a complex. Mol.Cell 2005 20 525 538 2BP3 CRYSTAL STRUCTURE OF FILAMIN A DOMAIN 17 AND GPIB ALPHA CYTOPLASMIC DOMAIN COMPLEX 2005-04-15 2005-11-30 Nakamura, F.,Pudas, R.,Heikkinen, O.,Permi, P.,Kilpelainen, I.,Munday, A.D.,Hartwig, J.H.,Stossel, T.P.,Ylanne, J. The structure of the GPIb-filamin A complex. Blood 2006 107 1925 1932 2C5D STRUCTURE OF A MINIMAL GAS6-AXL COMPLEX 2005-10-26 2005-12-19 Sasaki, T.,Knyazev, P.G.,Clout, N.J.,Cheburkin, Y.,Gohring, W.,Ullrich, A.,Timpl, R.,Hohenester, E. Structural basis for Gas6-Axl signalling. Embo J. 2006 25 80 87 2F9Q Crystal Structure of Human Cytochrome P450 2D6 2005-12-06 2005-12-20 Rowland, P.,Blaney, F.E.,Smyth, M.G.,Jones, J.J.,Leydon, V.R.,Oxbrow, A.K.,Lewis, C.J.,Tennant, M.G.,Modi, S.,Eggleston, D.S.,Chenery, R.J.,Bridges, A.M. Crystal Structure of Human Cytochrome P450 2D6 J.Biol.Chem. 2006 281 7614 7622 2C4D 2.6A CRYSTAL STRUCTURE OF PSATHYRELLA VELUTINA LECTIN IN COMPLEX WITH N-ACETYLGLUCOSAMINE 2005-10-18 2006-01-23 Cioci, G.,Mitchell, E.P.,Chazalet, V.,Debray, H.,Oscarson, S.,Lahmann, M.,Gautier, C.,Breton, C.,Perez, S.,Imberty, A. Beta-propeller crystal structure of Psathyrella velutina lectin: an integrin-like fungal protein interacting with monosaccharides and calcium. J.Mol.Biol. 2006 357 1575 1591 2B3T Molecular basis for bacterial class 1 release factor methylation by PrmC 2005-09-21 2006-01-24 Graille, M.,Heurgue-Hamard, V.,Champ, S.,Mora, L.,Scrima, N.,Ulryck, N.,van Tilbeurgh, H.,Buckingham, R.H. Molecular basis for bacterial class I release factor methylation by PrmC Mol.Cell 2005 20 917 927 2CDO STRUCTURE OF AGARASE CARBOHYDRATE BINDING MODULE IN COMPLEX WITH NEOAGAROHEXAOSE 2006-01-25 2006-02-16 Henshaw, J.,Horne-Bitschy, A.,van Bueren, A.L.,Money, V.A.,Bolam, D.N.,Czjzek, M.,Ekborg, N.A.,Weiner, R.M.,Hutcheson, S.W.,Davies, G.J.,Boraston, A.B.,Gilbert, H.J. Family 6 carbohydrate binding modules in beta-agarases display exquisite selectivity for the non-reducing termini of agarose chains. J.Biol.Chem. 2006 281 17099 17107 2B0L C-terminal DNA binding domain of transcriptional pleiotropic repressor CodY. 2005-09-14 2006-02-21 Levdikov, V.M.,Blagova, E.,Joseph, P.,Sonenshein, A.L.,Wilkinson, A.J. The Structure of CodY, a GTP- and Isoleucine-responsive Regulator of Stationary Phase and Virulence in Gram-positive Bacteria. J.Biol.Chem. 2006 281 11366 11373 2G30 beta appendage of AP2 complexed with ARH peptide 2006-02-17 2006-03-14 Edeling, M.A.,Mishra, S.K.,Keyel, P.A.,Steinhauser, A.L.,Collins, B.M.,Roth, R.,Heuser, J.E.,Owen, D.J.,Traub, L.M. Molecular Switches Involving the AP-2 beta2 Appendage Regulate Endocytic Cargo Selection and Clathrin Coat Assembly Dev.Cell 2006 10 329 342 1ZM5 Conjugative Relaxase TRWC in complex with ORIT dna, cooper-bound structure 2005-05-10 2006-04-25 Boer, R.,Russi, S.,Guasch, A.,Lucas, M.,Blanco, A.G.,Perez-Luque, R.,Coll, M.,de la Cruz, F. Unveiling the Molecular Mechanism of a Conjugative Relaxase: The Structure of TrwC Complexed with a 27-mer DNA Comprising the Recognition Hairpin and the Cleavage Site J.Mol.Biol. 2006 358 857 869 2G3M Crystal structure of the Sulfolobus solfataricus alpha-glucosidase MalA 2006-02-20 2006-05-02 Ernst, H.A.,Lo Leggio, L.,Willemoes, M.,Leonard, G.,Blum, P.,Larsen, S. Structure of the Sulfolobus solfataricus alpha-Glucosidase: Implications for Domain Conservation and Substrate Recognition in GH31. J.Mol.Biol. 2006 358 1106 1124 2F83 Crystal structure of a human coagulation factor 2005-12-01 2006-05-16 Papagrigoriou, E.,McEwan, P.A.,Walsh, P.N.,Emsley, J. Crystal structure of the factor XI zymogen reveals a pathway for transactivation. Nat.Struct.Mol.Biol. 2006 13 557 558 2FCX HIV-1 DIS kissing-loop in complex with neamine 2005-12-13 2006-05-16 Ennifar, E.,Paillart, J.C.,Bodlenner, A.,Walter, P.,Weibel, J.-M.,Aubertin, A.-M.,Pale, P.,Dumas, P.,Marquet, R. Targeting the dimerization initiation site of HIV-1 RNA with aminoglycosides: from crystal to cell. Nucleic Acids Res. 2006 34 2328 2339 2CN3 CRYSTAL STRUCTURES OF CLOSTRIDIUM THERMOCELLUM XYLOGLUCANASE 2006-05-17 2006-05-22 Martinez-Fleites, C.,Taylor, E.J.,Guerreiro, C.I.P.D.,Prates, J.A.M.,Ferreira, L.M.A.,Fontes, C.M.G.A.,Baumann, M.J.,Brumer, H.,Davies, G.J. Crystal Structures of Clostridium Thermocellum Xyloglucanase, Xgh74A, Reveal the Structural Basis for Xyloglucan Recognition and Degradation TO BE PUBLISHED 0 0 0 0 2F3T Crystal Structure Of E.coli Guanylate Kinase In Complex With Ganciclovir monophosphate 2005-11-22 2006-05-30 Hible, G.,Daalova, P.,Gilles, A.M.,Cherfils, J. Crystal structures of GMP kinase in complex with ganciclovir monophosphate and Ap5G. Biochimie 2006 88 1157 1164 2GHC Conformational mobility in the active site of a heme peroxidase 2006-03-27 2006-06-13 Badyal, S.K.,Joyce, M.G.,Sharp, K.H.,Seward, H.E.,Mewies, M.,Basran, J.,Macdonald, I.K.,Moody, P.C.,Raven, E.L. Conformational Mobility in the Active Site of a Heme Peroxidase. J.Biol.Chem. 2006 281 24512 24520 2GHD Conformational mobility in the active site of a heme peroxidase 2006-03-27 2006-06-13 Badyal, S.K.,Joyce, M.G.,Sharp, K.H.,Seward, H.E.,Mewies, M.,Basran, J.,Macdonald, I.K.,Moody, P.C.,Raven, E.L. Conformational Mobility in the Active Site of a Heme Peroxidase. J.Biol.Chem. 2006 281 24512 24520 2CLV MHC CLASS I NATURAL MUTANT H-2KBM8 HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND PBM8 PEPTIDE 2006-05-02 2006-06-14 Auphan-Anezin, N.,Mazza, C.,Guimezanes, A.,Barrett-Wilt, G.A.,Montero-Julian, F.,Roussel, A.,Hunt, D.F.,Malissen, B.,Schmitt-Verhulst, A.M. Distinct orientation of the alloreactive monoclonal CD8 T cell activation program by three different peptide/MHC complexes. Eur.J.Immunol. 2006 36 1856 1866 2GV5 crystal structure of Sfi1p/Cdc31p complex 2006-05-02 2006-06-27 Li, S.,Sandercock, A.M.,Conduit, P.,Robinson, C.V.,Williams, R.L.,Kilmartin, J.V. Structural role of Sfi1p-centrin filaments in budding yeast spindle pole body duplication. J.Cell Biol. 2006 173 867 877 2HE7 FERM domain of EPB41L3 (DAL-1) 2006-06-21 2006-07-04 Persson, C.,Busam, R.D.,Arrowsmith, C.,Berglund, H.,Collins, R.,Edwards, E.,Ehn, M.,Flodin, S.,Flores, A.,Graslund, S.,Hammarstrom, M.,Schiavone, L.H.,Johansson, I.,Hogbom, M.,Karlberg, T.,Kotenyova, T.,Nilvebrandt, J.,Norberg, P.,Stenmark, P.,Nordlund, P.,Nilsson-ehle, P.,Nyman, T.,Ogg, D.,Sagemark, J.,Sundstrom, M.,Uppenberg, J.,Van den berg, S.,Weigelt, J.,Thorsell, A.G.,Hallberg, B.M. FERM domain of EPB41L3 (DAL-1) TO BE PUBLISHED 0 0 0 0 2CE0 STRUCTURE OF OXIDIZED ARABIDOPSIS THALIANA CYTOCHROME 6A 2006-02-01 2006-07-05 Marcaida, M.J.,Schlarb-Ridley, B.G.,Worrall, J.A.,Wastl, J.,Evans, T.J.,Bendall, D.S.,Luisi, B.F.,Howe, C.J. Structure of cytochrome c6A, a novel dithio-cytochrome of Arabidopsis thaliana, and its reactivity with plastocyanin: implications for function. J.Mol.Biol. 2006 360 968 977 2GSY The 2.6A structure of Infectious Bursal Virus Derived T=1 Particles 2006-04-27 2006-07-18 Garriga, D.,Querol-Audi, J.,Abaitua, F.,Saugar, I.,Pous, J.,Verdaguer, N.,Caston, J.R.,Rodriguez, J.F. The 2.6-angstrom structure of infectious bursal disease virus-derived t=1 particles reveals new stabilizing elements of the virus capsid. J.Virol. 2006 80 6895 6905 2HDY Structure of human selenocysteine lyase 2006-06-21 2006-07-18 Collins, R.,Arrowsmith, C.,Berglund, H.,Edwards, A.,Ehn, M.,Flodin, S.,Flores, A.,Graslund, S.,Hallberg, B.M.,Hammarstrom, M.,Karlberg, T.,Kotenyova, T.,Nilsson-Ehle, P.,Nordlund, P.,Nyman, T.,Ogg, D.,Persson, C.,Sagemark, J.,Stenmark, P.,Sundstrom, M.,Thorsell, A.G.,Uppenberg, J.,Van Den Berg, S.,Weigelt, J.,Holmberg-Schiavone, L.,Hogbom, M. Structure of human selenocysteine lyase To be Published 0 0 0 0 2G8S Crystal structure of the soluble Aldose sugar dehydrogenase (Asd) from Escherichia coli in the apo-form 2006-03-03 2006-08-08 Southall, S.M.,Doel, J.J.,Richardson, D.J.,Oubrie, A. Soluble Aldose Sugar Dehydrogenase from Escherichia coli: A HIGHLY EXPOSED ACTIVE SITE CONFERRING BROAD SUBSTRATE SPECIFICITY. J.Biol.Chem. 2006 281 30650 30659 2GUY Orthorhombic crystal structure (space group P21212) of Aspergillus niger alpha-amylase at 1.6 A resolution 2006-05-02 2006-08-15 Vujicic-Zagar, A.,Dijkstra, B.W. Monoclinic crystal form of Aspergillus niger alpha-amylase in complex with maltose at 1.8 angstroms resolution. Acta Crystallogr.,Sect.F 2006 62 716 721 2H85 Crystal Structure of Nsp 15 from SARS 2006-06-06 2006-08-15 Ricagno, S.,Egloff, M.P.,Ulferts, R.,Coutard, B.,Nurizzo, D.,Campanacci, V.,Cambillau, C.,Ziebuhr, J.,Canard, B. 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The crystal structure of Arabidopsis thaliana allene oxide cyclase: insights into the oxylipin cyclization reaction. Plant Cell 2006 18 3201 3217 2HAS Crystal structure of VDR LBD in complex with 2alpha-(1-propoxy) calcitriol 2006-06-13 2006-08-29 Hourai, S.,Fujishima, T.,Kittaka, A.,Suhara, Y.,Takayama, H.,Rochel, N.,Moras, D. Probing a Water Channel near the A-Ring of Receptor-Bound 1alpha,25-Dihydroxyvitamin D3 with Selected 2alpha-Substituted Analogues J.Med.Chem. 2006 49 5199 5205 2HB7 Crystal structure of VDR LBD in complex with 2alpha(3-hydroxy-1-propyl) calcitriol 2006-06-14 2006-08-29 Hourai, S.,Fujishima, T.,Kittaka, A.,Suhara, Y.,Takayama, H.,Rochel, N.,Moras, D. Probing a Water Channel near the A-Ring of Receptor-Bound 1alpha,25-Dihydroxyvitamin D3 with Selected 2alpha-Substituted Analogues J.Med.Chem. 2006 49 5199 5205 2HQT Crystal structures of the interacting domains from yeast glutamyl-tRNA synthetase and tRNA aminoacylation and nuclear export cofactor Arc1p reveal a novel function for an old fold 2006-07-19 2006-09-05 Simader, H.,Hothorn, M.,Suck, D. Structures of the interacting domains from yeast glutamyl-tRNA synthetase and tRNA-aminoacylation and nuclear-export cofactor Arc1p reveal a novel function for an old fold. ACTA CRYSTALLOGR.,SECT.D 2006 62 1510 1519 2HRA Crystal structures of the interacting domains from yeast glutamyl-tRNA synthetase and tRNA aminoacylation and nuclear export cofactor Arc1p reveal a novel function for an old fold 2006-07-20 2006-09-05 Simader, H.,Hothorn, M.,Suck, D. 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Nature 2007 448 87 91 2GAA Crystal structure of YFH7 from Saccharomyces cerevisiae: a putative P-loop containing kinase with a circular permutation. 2006-03-08 2007-03-27 Gueguen-Chaignon, V.,Chaptal, V.,Lariviere, L.,Costa, N.,Lopes, P.,Morera, S.,Nessler, S. Crystal structure and functional analysis identify the P-loop containing protein YFH7 of Saccharomyces cerevisiae as an ATP-dependent kinase. Proteins 2007 71 804 812 2P4W Crystal structure of heat shock regulator from Pyrococcus furiosus 2007-03-13 2007-03-27 Liu, W.,Vierke, G.,Wenke, A.K.,Thomm, M.,Ladenstein, R. Crystal Structure of the Archaeal Heat Shock Regulator from Pyrococcus furiosus: A Molecular Chimera Representing Eukaryal and Bacterial Features. J.Mol.Biol. 2007 369 474 488 2IWG COMPLEX BETWEEN THE PRYSPRY DOMAIN OF TRIM21 AND IGG FC 2006-06-30 2007-03-27 James, L.C.,Keeble, A.H.,Rhodes, D.A.,Trowsdale, J. Structural Basis for Pryspry-Mediated Tripartite Motif Protein. To be Published 0 0 0 0 2IYA THE CRYSTAL STRUCTURE OF MACROLIDE GLYCOSYLTRANSFERASES: A BLUEPRINT FOR ANTIBIOTIC ENGINEERING 2006-07-13 2007-03-27 Bolam, D.N.,Roberts, S.M.,Proctor, M.R.,Turkenburg, J.P.,Dodson, E.J.,Martinez-Fleites, C.,Yang, M.,Davis, B.G.,Davies, G.J.,Gilbert, H.J. The Crystal Structure of Two Macrolide Glycosyltransferases Provides a Blueprint for Host Cell Antibiotic Immunity. Proc.Natl.Acad.Sci.USA 2007 104 5336 0 2HZK Crystal structures of a sodium-alpha-keto acid binding subunit from a TRAP transporter in its open form 2006-08-09 2007-04-03 Gonin, S.,Arnoux, P.,Pierru, B.,Lavergne, J.,Alonso, B.,Sabaty, M.,Pignol, D. Crystal structures of an Extracytoplasmic Solute Receptor from a TRAP transporter in its open and closed forms reveal a helix-swapped dimer requiring a cation for alpha-keto acid binding. 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Crystallographic and Kinetic Studies of Human Mitochondrial Acetoacetyl-CoA Thiolase: The Importance of Potassium and Chloride Ions for Its Structure and Function Biochemistry 2007 46 4305 4321 2IXA A-ZYME, N-ACETYLGALACTOSAMINIDASE 2006-07-07 2007-04-10 Liu, Q.P.,Sulzenbacher, G.,Yuan, H.,Bennett, E.P.,Pietz, G.,Saunders, K.,Spence, J.,Nudelman, E.,Levery, S.B.,White, T.,Neveu, J.M.,Lane, W.S.,Bourne, Y.,Olsson, M.L.,Henrissat, B.,Clausen, H. Bacterial Glycosidases for the Production of Universal Red Blood Cells. To be Published 0 0 0 0 2O73 Structure of OHCU decarboxylase in complex with allantoin 2006-12-10 2007-04-10 Cendron, L.,Berni, R.,Folli, C.,Ramazzina, I.,Percudani, R.,Zanotti, G. 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Functional and Structural Studies of the Vaccinia Virus Virulence Factor N1 Reveal a Bcl-2-Like Anti-Apoptotic Protein J.Gen.Virol. 2007 88 1656 0 2PXC Crystal structure of the Murray Valley Encephalitis Virus NS5 2'-O Methyltransferase domain in complex with SAM and GTPA 2007-05-14 2007-05-29 Assenberg, R.,Ren, J.,Verma, A.,Walter, T.S.,Alderton, D.,Hurrelbrink, R.J.,Fuller, S.D.,Bressanelli, S.,Owens, R.J.,Stuart, D.I.,Grimes, J.M. Crystal structure of the Murray Valley encephalitis virus NS5 methyltransferase domain in complex with cap analogues. J.Gen.Virol. 2007 88 2228 2236 2PFY Crystal structure of DctP7, a Bordetella pertussis extracytoplasmic solute receptor binding pyroglutamic acid 2007-04-06 2007-06-12 Rucktooa, P.,Antoine, R.,Herrou, J.,Huvent, I.,Locht, C.,Jacob-Dubuisson, F.,Villeret, V.,Bompard, C. Crystal Structures of two Bordetella pertussis Periplasmic Receptors Contribute to Defining a Novel Pyroglutamic Acid Binding DctP Subfamily. J.Mol.Biol. 2007 370 93 106 2V2Z ISPE IN COMPLEX WITH ADP AND CDPME 2007-06-08 2007-06-19 Sgraja, T.,Alphey, M.S.,Ghilagaber, S.,Marquez, R.,Robertson, M.N.,Hemmings, J.L.,Lauw, S.,Rohdich, F.,Bacher, A.,Eisenreich, W.,Illarionova, V.,Hunter, W.N. Characterization of Aquifex Aeolicus 4-Diphosphocytidyl-2C-Methyl-D-Erythritol Kinase-Ligand Recognition in a Template for Antimicrobial Drug Discovery. To be Published 0 0 0 0 2V25 STRUCTURE OF THE CAMPYLOBACTER JEJUNI ANTIGEN PEB1A, AN ASPARTATE AND GLUTAMATE RECEPTOR WITH BOUND ASPARTATE 2007-06-01 2007-06-26 Muller, A.,Del Rocio Leon-Kempis, M.,Dodson, E.,Wilson, K.S.,Wilkinson, A.J.,Kelly, D.J. 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To be Published 0 0 0 0 2UWB CRYSTAL STRUCTURE OF THE NASTURTIUM SEEDLING MUTANT XYLOGLUCANASE ISOFORM NXG1-DELTA-YNIIG 2007-03-20 2007-06-26 Baumann, M.J.,Eklof, J.,Michel, G.,Kallasa, A.,Teeri, T.T.,Czjzek, M.,Brumer, H. Structural Evidence for the Evolution of Xyloglucanase Activity from Xyloglucan Endo-Transglycosylases: Biological Implications for Cell Wall Metabolism. Plant Cell 2007 19 1947 0 2Q0L Helicobacter pylori thioredoxin reductase reduced by sodium dithionite in complex with NADP+ 2007-05-22 2007-07-03 Gustafsson, T.N.,Sandalova, T.,Lu, J.,Holmgren, A.,Schneider, G. High-resolution structures of oxidized and reduced thioredoxin reductase from Helicobacter pylori. Acta Crystallogr.,Sect.D 2007 63 833 843 2Q0K Oxidized thioredoxin reductase from Helicobacter pylori in complex with NADP+ 2007-05-22 2007-07-03 Gustafsson, T.N.,Sandalova, T.,Lu, J.,Holmgren, A.,Schneider, G. High-resolution structures of oxidized and reduced thioredoxin reductase from Helicobacter pylori. 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The crystal structure of the pentahaem c-type cytochrome NrfB and characterization of its solution-state interaction with the pentahaem nitrite reductase NrfA. Biochem.J. 2007 406 19 30 2I2E Crystal structure of LmNADK1 2006-08-16 2007-08-07 Poncet-Montange, G.,Assairi, L.,Arold, S.,Pochet, S.,Labesse, G. NAD kinases use substrate-assisted catalysis for specific recognition of NAD. J.Biol.Chem. 2007 282 33925 33934 2I2D Crystal structure of LmNADK1 2006-08-16 2007-08-07 Poncet-Montange, G.,Assairi, L.,Arold, S.,Pochet, S.,Labesse, G. NAD kinases use substrate-assisted catalysis for specific recognition of NAD. J.Biol.Chem. 2007 282 33925 33934 2HXD Bifunctional dCTP deaminase-dUTPase mutant enzyme variant E145A from Methanocaldococcus jannaschii in complex with alpha,beta-imido dUTP and magnesium 2006-08-03 2007-08-14 Bynck, J.H.,Willemoes, M.,Larsen, S.,Johansson, E. Structural evidence for a concerted Bifunctionality in dCTP deaminase-dUTPase from Methanocaldococcus jannaschii To be Published 0 0 0 0 2HXE Bifunctional dCTP deaminase-dUTPase mutant enzyme variant E145Q from Methanocaldococcus jannaschii in complex with pyrophosphate and magnesium 2006-08-03 2007-08-14 Bynck, J.H.,Willemoes, M.,Larsen, S.,Johansson, E. Structural evidence for a concerted Bifunctionality in dCTP deaminase-dUTPase from Methanocaldococcus jannaschii To be Published 0 0 0 0 2HZQ Crystal structure of human apolipoprotein D (ApoD) in complex with progesterone 2006-08-09 2007-08-14 Eichinger, A.,Nasreen, A.,Kim, H.J.,Skerra, A. Structural insight into the dual ligand specificity and mode of high density lipoprotein association of apolipoprotein d. J.Biol.Chem. 2007 282 31068 31075 2P28 Structure of the PHE2 and PHE3 fragments of the integrin beta2 subunit 2007-03-07 2007-08-14 Shi, M.,Foo, S.Y.,Tan, S.M.,Mitchell, E.P.,Law, S.K.A.,Lescar, J. A structural hypothesis for the transition between bent and extended conformations of the leukocyte beta2 integrins J.Biol.Chem. 2007 282 30198 30206 2QEQ Crystal structure of kunjin virus ns3 helicase 2007-06-26 2007-08-14 Mastrangelo, E.,Milani, M.,Bollati, M.,Selisko, B.,Peyrane, F.,Pandini, V.,Sorrentino, G.,Canard, B.,Konarev, P.V.,Svergun, D.I.,de Lamballerie, X.,Coutard, B.,Khromykh, A.A.,Bolognesi, M. Crystal structure and activity of Kunjin virus NS3 helicase; protease and helicase domain assembly in the full length NS3 protein J.Mol.Biol. 2007 372 444 455 2QKI Human C3c in complex with the inhibitor compstatin 2007-07-11 2007-08-14 Janssen, B.J.,Halff, E.F.,Lambris, J.D.,Gros, P. Structure of compstatin in complex with complement component C3c reveals a new mechanism of complement inhibition. J.Biol.Chem. 2007 282 29241 29247 2QPQ Structure of Bug27 from Bordetella pertussis 2007-07-25 2007-08-21 Herrou, J.,Bompard, C.,Antoine, R.,Leroy, A.,Rucktooa, P.,Hot, D.,Huvent, I.,Locht, C.,Villeret, V.,Jacob-Dubuisson, F. Structure of Bug27 from Bordetella pertussis TO BE PUBLISHED 0 0 0 0 2V8O STRUCTURE OF THE MURRAY VALLEY ENCEPHALITIS VIRUS RNA HELICASE TO 1.9A RESOLUTION 2007-08-08 2007-08-21 Mancini, E.J.,Assenberg, R.,Verma, A.,Walter, T.S.,Tuma, R.,Grimes, J.M.,Owens, R.J.,Stuart, D.I. Structure of the Murray Valley Encephalitis Virus RNA Helicase at 1.9 A Resolution. Protein Sci. 2007 16 2294 0 2V43 CRYSTAL STRUCTURE OF RSEB: A SENSOR FOR PERIPLASMIC STRESS RESPONSE IN E. COLI 2007-06-24 2007-08-28 Wollmann, P.,Zeth, K. The Structure of Rseb: A Sensor in Periplasmic Stress Response of E. Coli. J.Mol.Biol. 2007 372 927 0 2QJ3 Mycobacterium tuberculosis FabD 2007-07-06 2007-09-04 Ghadbane, H.,Brown, A.K.,Kremer, L.,Besra, G.S.,Futterer, K. Structure of Mycobacterium tuberculosis mtFabD, a malonyl-CoA:acyl carrier protein transacylase (MCAT). Acta Crystallogr.,Sect.F 2007 63 831 835 2V3C CRYSTAL STRUCTURE OF THE SRP54-SRP19-7S.S SRP RNA COMPLEX OF M. JANNASCHII 2007-06-15 2007-09-04 Hainzl, T.,Huang, S.,Sauer-Eriksson, A.E. Interaction of Signal-Recognition Particle 54 Gtpase Domain and Signal-Recognition Particle RNA in the Free Signal-Recognition Particle. Proc.Natl.Acad.Sci.USA 2007 104 14911 0 2VAP FTSZ GDP M. JANNASCHII 2007-09-03 2007-09-11 Oliva, M.A.,Trambaiolo, D.,Lowe, J. Structural Insights Into the Conformational Variability of Ftsz J.Mol.Biol. 2007 373 1229 0 2Q8K The crystal structure of Ebp1 2007-06-11 2007-09-25 Kowalinski, E.,Bange, G.,Bradatsch, B.,Hurt, E.,Wild, K.,Sinning, I. The crystal structure of Ebp1 reveals a methionine aminopeptidase fold as binding platform for multiple interactions. Febs Lett. 2007 581 4450 4454 2V9T COMPLEX BETWEEN THE SECOND LRR DOMAIN OF SLIT2 AND THE FIRST IG DOMAIN FROM ROBO1 2007-08-25 2007-09-25 Morlot, C.,Thielens, N.M.,Ravelli, R.B.,Hemrika, W.,Romijn, R.A.,Gros, P.,Cusack, S.,Mccarthy, A.A. Structural Insights Into the Slit-Robo Complex. Proc.Natl.Acad.Sci.USA 2007 104 14923 0 2J6P STRUCTURE OF AS-SB REDUCTASE FROM LEISHMANIA MAJOR 2006-10-02 2007-10-02 Bisacchi, D.,Zhou, Y.,Rosen, B.P.,Mukhopadhyay, R.,Bordo, D. Structure of the Arsenate-Antimonate Reductase from Leishmania Major To be Published 0 0 0 0 2V8G CRYSTAL STRUCTURE OF BETA-ALANINE SYNTHASE FROM SACCHAROMYCES KLUYVERI IN COMPLEX WITH THE PRODUCT BETA-ALANINE 2007-08-07 2007-10-02 Lundgren, S.,Andersen, B.,Piskur, J.,Dobritzsch, D. Crystal Structures of Yeast-Alanine Synthase Complexes Reveal the Mode of Substrate Binding and Large Scale Domain Closure Movements. J.Biol.Chem. 2007 282 36037 0 2J3S CRYSTAL STRUCTURE OF THE HUMAN FILAMIN A IG DOMAINS 19 TO 21 2006-08-23 2007-10-16 Lad, Y.,Kiema, T.-R.,Jiang, P.,Pentikanen, O.T.,Coles, C.H.,Campbell, I.D.,Calderwood, D.A.,Ylanne, J. Structure of Three Tandem Filamin Domains Reveals Auto-Inhibition of Ligand-Binding. Embo J. 2007 26 3993 0 2V6X STRACTURAL INSIGHT INTO THE INTERACTION BETWEEN ESCRT-III AND VPS4 2007-07-23 2007-10-16 Obita, T.,Saksena, S.,Ghazi-Tabatabai, S.,Gill, D.J.,Perisic, O.,Emr, S.D.,Williams, R.L. Structural Basis for Selective Recognition of Escrt-III by the Aaa ATPase Vps4 Nature 2007 449 735 0 2V6Y STRUCTURE OF THE MIT DOMAIN FROM A S. SOLFATARICUS VPS4-LIKE ATPASE 2007-07-24 2007-10-16 Obita, T.,Saksena, S.,Ghazi-Tabatabai, S.,Gill, D.J.,Perisic, O.,Emr, S.D.,Williams, R.L. Structural Basis for Selective Recognition of Escrt-III by the Aaa ATPase Vps4 Nature 2007 449 735 0 2IPH X-ray Structure at 1.75 A Resolution of a Norovirus Protease Linked to an Active Site Directed Peptide Inhibitor 2006-10-12 2007-10-23 Hussey, R.J.,Cooper, J.B.,Erskine, P.,Broadbridge, R.,Clarke, I.,Lambden, P.,Shoolingin-Jordan, P.M. X-ray Structure at 1.75 A Resolution of a Norovirus 3C Protease Linked to an Active Site-Directed Peptide Inhibitor To be Published 0 0 0 0 2VD6 HUMAN ADENYLOSUCCINATE LYASE IN COMPLEX WITH ITS SUBSTRATE N6-(1,2-DICARBOXYETHYL)-AMP, AND ITS PRODUCTS AMP AND FUMARATE. 2007-09-30 2007-10-23 Stenmark, P.,Moche, M.,Arrowsmith, C.,Berglund, H.,Busam, R.,Collins, R.,Dahlgren, L.G.,Edwards, A.,Flodin, S.,Flores, A.,Graslund, S.,Hammarstrom, M.,Hallberg, B.M.,Holmberg-Schiavone, L.,Johansson, I.,Kallas, A.,Karlberg, T.,Kotenyova, T.,Lehtio, L.,Nilsson, M.,Nyman, T.,Ogg, D.,Persson, C.,Sagemark, J.,Sundstrom, M.,Thorsell, A.G.,Tresaugues, L.,Van-Den-Berg, S.,Weigelt, J.,Welin, M.,Nordlund, P.,Structuralgenomicsconsortium Human Adenylosuccinate Lyase in Complex with its Substrate N6-(1,2-Dicarboxyethyl)-AMP, and its Products AMP and Fumarate. To be Published 0 0 0 0 2PID Crystal structure of human mitochondrial tyrosyl-tRNA synthetase in complex with an adenylate analog 2007-04-13 2007-10-23 Bonnefond, L.,Frugier, M.,Touze, E.,Lorber, B.,Florentz, C.,Giege, R.,Sauter, C.,Rudinger-Thirion, J. Crystal Structure of Human Mitochondrial Tyrosyl-tRNA Synthetase Reveals Common and Idiosyncratic Features. Structure 2007 15 1505 1516 2VBC CRYSTAL STRUCTURE OF THE NS3 PROTEASE-HELICASE FROM DENGUE VIRUS 2007-09-10 2007-10-30 Luo, D.H.,Xu, T.,Hunke, C.,Gruber, G.,Vasudevan, S.G.,Lescar, J. Crystal Structure of the Ns3 Protease-Helicase from Dengue Virus. J.Virol. 2008 82 173 0 2JDZ CRYSTAL STRUCTURE OF RECOMBINANT DIOCLEA GUIANENSIS LECTIN COMPLEXED WITH 5-BROMO-4-CHLORO-3-INDOLYL-A-D-MANNOSE 2007-01-12 2007-10-30 Nagano, C.S.,Calvete, J.J.,Barettino, D.,Perez, A.,Cavada, B.S.,Sanz, L. Insights Into the Structural Basis of the Ph-Dependent Dimer-Tetramer Equilibrium Through Crystallographic Analysis of Recombinant Diocleinae Lectins. To be Published 0 0 0 0 2O5P Crystal structure of the full length ferric pyoverdine outer membrane receptor FpvA of Pseudomonas aeruginosa in its apo form 2006-12-06 2007-10-30 Brillet, K.,Journet, L.,Celia, H.,Paulus, L.,Stahl, A.,Pattus, F.,Cobessi, D. A beta strand lock exchange for signal transduction in TonB-dependent transducers on the basis of a common structural motif. Structure 2007 15 1383 1391 3B3G The 2.4 A crystal structure of the apo catalytic domain of coactivator-associated arginine methyl transferase I(CARM1,140-480). 2007-10-22 2007-11-06 Troffer-Charlier, N.,Cura, V.,Hassenboehler, P.,Moras, D.,Cavarelli, J. Functional insights from structures of coactivator-associated arginine methyltransferase 1 domains. Embo J. 2007 26 4391 4401 2QMU Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states 2007-07-17 2007-11-06 Yatime, L.,Mechulam, Y.,Blanquet, S.,Schmitt, E. Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states. Proc.Natl.Acad.Sci.Usa 2007 104 18445 18450 2V26 MYOSIN VI (MD) PRE-POWERSTROKE STATE (MG.ADP.VO4) 2007-06-03 2007-11-20 Menetrey, J.,Llinas, P.,Mukherjea, M.,Sweeney, H.L.,Houdusse, A. The Structural Basis for the Large Powerstroke of Myosin Vi. Cell(Cambridge,Mass.) 2007 131 300 0 2QY7 Crystal structure of human epsinR ENTH domain 2007-08-13 2007-11-27 Miller, S.E.,Collins, B.M.,McCoy, A.J.,Robinson, M.S.,Owen, D.J. A SNARE-adaptor interaction is a new mode of cargo recognition in clathrin-coated vesicles Nature 2007 450 570 574 2PUS Unprecedented activation mechanism of a non-canonical RNA-dependent RNA polymerase 2007-05-09 2007-11-27 Garriga, D.,Navarro, A.,Querol-Audi, J.,Abaitua, F.,Rodriguez, J.F.,Verdaguer, N. Activation mechanism of a noncanonical RNA-dependent RNA polymerase. Proc.Natl.Acad.Sci.Usa 2007 104 20540 20545 2VHQ P4 PROTEIN FROM BACTERIOPHAGE PHI12 S252A MUTANT IN COMPLEX WITH ATP AND MG 2007-11-22 2007-12-04 Kainov, D.E.,Mancini, E.J.,Telenius, J.,Lisal, J.,Grimes, J.M.,Bamford, D.H.,Stuart, D.I.,Tuma, R. Structural Basis of Mechano-Chemical Coupling in a Hexameric Molecular Motor To be Published 0 0 0 0 2VGX STRUCTURE OF THE YERSINIA ENTEROCOLITICA TYPE III SECRETION TRANSLOCATOR CHAPERONE SYCD 2007-11-16 2007-12-04 Buttner, C.R.,Sorg, I.,Cornelis, G.R.,Heinz, D.W.,Niemann, H.H. Structure of the Yersinia Enterocolitica Type III Secretion Chaperone Sycd J.Mol.Biol. 2008 375 997 0 2R8K Structure of the Eukaryotic DNA Polymerase eta in complex with 1,2-d(GpG)-cisplatin containing DNA 2007-09-11 2007-12-11 Alt, A.,Lammens, K.,Chiocchini, C.,Lammens, A.,Pieck, J.C.,Kuch, D.,Hopfner, K.P.,Carell, T. Bypass of DNA lesions generated during anticancer treatment with cisplatin by DNA polymerase eta Science 2007 318 967 970 3BIB Tim-4 in complex with phosphatidylserine 2007-11-30 2008-01-01 Santiago, C.,Ballesteros, A.,Martinez-Munoz, L.,Mellado, M.,Kaplan, G.G.,Freeman, G.J.,Casasnovas, J.M. Structures of T Cell Immunoglobulin Mucin Protein 4 Show a Metal-Ion-Dependent Ligand Binding Site where Phosphatidylserine Binds. Immunity 2007 27 941 951 2P1E Crystal structure of the Leishmania infantum glyoxalase II with D-Lactate at the active site 2007-03-05 2008-01-15 Silva, M.S.,Barata, L.,Ferreira, A.E.,Romao, S.,Tomas, A.M.,Freire, A.P.,Cordeiro, C. Catalysis and Structural Properties of Leishmania infantum Glyoxalase II: Trypanothione Specificity and Phylogeny. Biochemistry 2008 47 195 204 2PVQ Crystal structure of Ochrobactrum anthropi glutathione transferase Cys10Ala mutant with glutathione bound at the H-site 2007-05-10 2008-01-15 Allocati, N.,Federici, L.,Masulli, M.,Favaloro, B.,Di Ilio, C. Cysteine 10 is critical for the activity of Ochrobactrum anthropi glutathione transferase and its mutation to alanine causes the preferential binding of glutathione to the H-site. Proteins 2008 71 16 23 2V4B CRYSTAL STRUCTURE OF HUMAN ADAMTS-1 CATALYTIC DOMAIN AND CYSTEINE-RICH DOMAIN (APO-FORM) 2007-06-28 2008-01-15 Gerhardt, S.,Hassall, G.,Hawtin, P.,Mccall, E.,Flavell, L.,Minshull, C.,Hargreaves, D.,Ting, A.,Pauptit, R.A.,Parker, A.E.,Abbott, W.M. Crystal Structures of Human Adamts-1 Reveal a Conserved Catalytic Domain and a Disintegrin-Like Domain with a Fold Homologous to Cysteine-Rich Domains. J.Mol.Biol. 2007 373 891 0 2P18 Crystal structure of the Leishmania infantum glyoxalase II 2007-03-02 2008-01-15 Silva, M.S.,Barata, L.,Ferreira, A.E.,Romao, S.,Tomas, A.M.,Freire, A.P.,Cordeiro, C. Catalysis and Structural Properties of Leishmania infantum Glyoxalase II: Trypanothione Specificity and Phylogeny. Biochemistry 2008 47 195 204 2VEB HIGH RESOLUTION STRUCTURE OF PROTOGLOBIN FROM METHANOSARCINA ACETIVORANS C2A 2007-10-18 2008-01-22 Nardini, M.,Pesce, A.,Thijs, L.,Saito, J.A.,Dewilde, S.,Alam, M.,Ascenzi, P.,Coletta, M.,Ciaccio, C.,Moens, L.,Bolognesi, M. Archaeal Protoglobin Structure Indicates New Ligand Diffusion Paths and Modulation of Haem-Reactivity. To be Published 0 0 0 0 2QDQ Crystal structure of the talin dimerisation domain 2007-06-21 2008-01-29 Gingras, A.R.,Bate, N.,Goult, B.T.,Hazelwood, L.,Canestrelli, I.,Grossmann, J.G.,Liu, H.,Putz, N.S.,Roberts, G.C.,Volkmann, N.,Hanein, D.,Barsukov, I.L.,Critchley, D.R. The structure of the C-terminal actin-binding domain of talin. Embo J. 2008 27 458 469 2JF1 CRYSTAL STRUCTURE OF THE FILAMIN A REPEAT 21 COMPLEXED WITH THE INTEGRIN BETA2 CYTOPLASMIC TAIL PEPTIDE 2007-01-25 2008-02-05 Takala, H.,Nurminen, E.,Nurmi, S.M.,Aatonen, M.,Strandin, T.,Takatalo, M.,Kiema, T.,Gahmberg, C.G.,Ylanne, J.,Fagerholm, S.C. Beta2 Integrin Phosphorylation on Thr758 Acts as a Molecular Switch to Regulate 14-3-3 and Filamin Binding. Blood 2008 112 1853 0 2R18 Structural insights into the multifunctional protein VP3 of Birnaviruses 2007-08-22 2008-02-05 Casanas, A.,Navarro, A.,Ferrer-Orta, C.,Gonzalez, D.,Rodriguez, J.F.,Verdaguer, N. Structural insights into the multifunctional protein VP3 of birnaviruses. Structure 2008 16 29 37 2ZBK Crystal structure of an intact type II DNA topoisomerase: insights into DNA transfer mechanisms 2007-10-22 2008-02-12 Graille, M.,Durand, D.,Lecointe, F.,Gadelle, D.,Quevillon-Cheruel, S.,Vachette, P.,Forterre, P.,van Tilbeurgh, H. Crystal Structure of an Intact Type II DNA Topoisomerase: Insights into DNA Transfer Mechanisms Structure 2008 16 360 370 2V5I STRUCTURE OF THE RECEPTOR-BINDING PROTEIN OF BACTERIOPHAGE DET7: A PODOVIRAL TAILSPIKE IN A MYOVIRUS 2007-07-05 2008-02-19 Walter, M.,Fiedler, C.,Grassl, R.,Biebl, M.,Rachel, R.,Hermo-Parrado, X.L.,Llamas-Saiz, A.L.,Seckler, R.,Miller, S.,Van Raaij, M.J. Structure of the Receptor-Binding Protein of Bacteriophage Det7: A Podoviral Tail Spike in a Myovirus. J.Virol. 2008 82 2265 0 2VF5 GLUCOSAMINE-6-PHOSPHATE SYNTHASE IN COMPLEX WITH GLUCOSAMINE-6-PHOSPHATE 2007-10-30 2008-03-04 Mouilleron, S.,Badet-Denisot, M.-A.,Golinelli-Pimpaneau, B. Ordering of C-Terminal Loop and Glutaminase Domains of Glucosamine-6-Phosphate Synthase Promotes Sugar Ring Opening and Formation of the Ammonia Channel. To be Published 0 0 0 0 2VH1 CRYSTAL STRUCTURE OF BACTERIAL CELL DIVISION PROTEIN FTSQ FROM E.COLI 2007-11-16 2008-03-11 Van Den Ent, F.,Vinkenvleugel, T.,Ind, A.,West, P.,Veprintsev, D.,Naninga, N.,Den Blaauwen, T.,Lowe, J. Structural and Mutational Analysis of Cell Division Protein Ftsq Mol.Microbiol. 2008 68 110 0 2VHZ CRYSTAL STRUCTURE OF HOLO L-ALANINE DEHYDROGENASE FROM MYCOBACTERIUM TUBERCULOSIS IN THE CLOSED CONFORMATION 2007-11-26 2008-03-11 Agren, D.,Stehr, M.,Berthold, C.L.,Kapoor, S.,Oehlmann, W.,Singh, M.,Schneider, G. Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding. J.Mol.Biol. 2008 377 1161 0 2Z69 Crystal Structure of the sensor domain of the transcriptional regulator DNR from Pseudomonas aeruginosa 2007-07-24 2008-03-18 Giardina, G.,Rinaldo, S.,Johnson, K.A.,Di Matteo, A.,Brunori, M.,Cutruzzola, F. NO sensing in Pseudomonas aeruginosa: structure of the transcriptional regulator DNR. J.Mol.Biol. 2008 378 1002 1015 2VHI CRYSTAL STRUCTURE OF A PYRIMIDINE DEGRADING ENZYME FROM DROSOPHILA MELANOGASTER 2007-11-21 2008-03-25 Lundgren, S.,Lohkamp, B.,Andersen, B.,Piskur, J.,Dobritzsch, D. The Crystal Structure of Beta-Alanine Synthase from Drosophila Melanogaster Reveals a Homooctameric Helical Turn-Like Assembly. To be Published 0 0 0 0 2RF7 Crystal structure of the escherichia coli nrfa mutant Q263E 2007-09-28 2008-03-25 Clarke, T.A.,Kemp, G.L.,Wonderen, J.H.,Doyle, R.M.,Cole, J.A.,Tovell, N.,Cheesman, M.R.,Butt, J.N.,Richardson, D.J.,Hemmings, A.M. Role of a Conserved Glutamine Residue in Tuning the Catalytic Activity of Escherichia coli Cytochrome c Nitrite Reductase. Biochemistry 2008 47 3789 3799 3BB1 Crystal structure of Toc34 from Pisum sativum in complex with Mg2+ and GMPPNP 2007-11-09 2008-04-01 Koenig, P.,Oreb, M.,Hofle, A.,Kaltofen, S.,Rippe, K.,Sinning, I.,Schleiff, E.,Tews, I. The GTPase cycle of the chloroplast import receptors Toc33/Toc34 - Implications from monomeric and dimeric structures Structure 2008 16 585 596 3BB4 Crystal structure of Toc33 from Arabidopsis thaliana in complex with Mg2+ and GMPPNP 2007-11-09 2008-04-01 Koenig, P.,Oreb, M.,Hofle, A.,Kaltofen, S.,Rippe, K.,Sinning, I.,Schleiff, E.,Tews, I. The GTPase cycle of the chloroplast import receptors Toc33/Toc34 - Implications from monomeric and dimeric structures Structure 2008 16 585 596 3BB3 Crystal structure of Toc33 from Arabidopsis thaliana in complex with GDP and Mg2+ 2007-11-09 2008-04-01 Koenig, P.,Oreb, M.,Hofle, A.,Kaltofen, S.,Rippe, K.,Sinning, I.,Schleiff, E.,Tews, I. The GTPase cycle of the chloroplast import receptors Toc33/Toc34 - Implications from monomeric and dimeric structures Structure 2008 16 585 596 2V3F ACID-BETA-GLUCOSIDASE PRODUCED IN CARROT 2007-06-17 2008-04-08 Shaaltiel, Y.,Bartfeld, D.,Hashmueli, S.,Baum, G.,Brill-Almon, E.,Galili, G.,Dym, O.,Boldin-Adamsky, S.A.,Silman, I.,Sussman, J.L.,Futerman, A.H.,Aviezer, D. Production of Glucocerebrosidase with Terminal Mannose Glycans for Enzyme Replacement Therapy of Gaucher'S Disease Using a Plant Cell System. Plant Biotechnol.J. 2007 5 579 0 2VOL MURINE TRIM21 IN COMPLEX WITH MURINE IGG FC 2008-02-19 2008-04-08 Keeble, A.H.,Khan, Z.,Forster, A.,James, L.C. Trim21 is an Igg Receptor that is Structurally, Thermodynamically, and Kinetically Conserved. Proc.Natl.Acad.Sci.USA 2008 105 6045 0 2VQ7 BACTERIAL FLAVIN-CONTAINING MONOOXYGENASE IN COMPLEX WITH NADP: NATIVE DATA 2008-03-12 2008-04-22 Alfieri, A.,Malito, E.,Orru, R.,Fraaije, M.W.,Mattevi, A. Revealing the Moonlighting Role of Nadp in the Structure of a Flavin-Containing Monooxygenase. Proc.Natl.Acad.Sci.USA 2008 105 6572 0 2VP6 STRUCTURAL STUDIES OF NUCLEOSIDE ANALOG AND FEEDBACK INHIBITOR BINDING TO DROSOPHILA MELANOGASTER MULTISUBSTRATE DEOXYRIBONUCLEOSIDE KINASE 2008-02-26 2008-04-29 Mikkelsen, N.E.,Munch-Petersen, B.,Eklund, H. Structural Studies of Nucleoside Analog and Feedback Inhibitor Binding to Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase. FEBS J. 2008 275 2151 0 2VON CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER AUAAUUU 2008-02-19 2008-05-06 Kotik-Kogan, O.,Valentine, E.R.,Sanfelice, D.,Conte, M.R.,Curry, S. Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3' Ends by the Human La Protein. Structure 2008 16 852 0 2QEK HIV-1 subtype F DIS RNA extended duplex form 2007-06-26 2008-05-06 Freisz, S.,Lang, K.,Micura, R.,Dumas, P.,Ennifar, E. Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site Angew.Chem.Int.Ed.Engl. 2008 47 4110 4113 2VOP CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER AUUUU 2008-02-19 2008-05-06 Kotik-Kogan, O.,Valentine, E.R.,Sanfelice, D.,Conte, M.R.,Curry, S. Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3' Ends by the Human La Protein. Structure 2008 16 852 0 2VOD CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER AUAUUUU 2008-02-15 2008-05-06 Kotik-Kogan, O.,Valentine, E.R.,Sanfelice, D.,Conte, M.R.,Curry, S. Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3' Ends by the Human La Protein. Structure 2008 16 852 0 3C44 Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to paromomycin 2008-01-29 2008-05-06 Freisz, S.,Lang, K.,Micura, R.,Dumas, P.,Ennifar, E. Binding of Aminoglycoside Antibiotics to the Duplex Form of the HIV-1 Genomic RNA Dimerization Initiation Site. Angew.Chem.Int.Ed.Engl. 2008 0 0 0 2UYL CRYSTAL STRUCTURE OF A MONOCLONAL ANTIBODY DIRECTED AGAINST AN ANTIGENIC DETERMINANT COMMON TO OGAWA AND INABA SEROTYPES OF VIBRIO CHOLERAE O1 2007-04-10 2008-05-13 Ahmed, F.,Andre-Leroux, G.,Haouz, A.,Delepierre, M.,Nato, F.,Fournier, J.M.,M Alzari, P. Crystal Structure of a Monoclonal Antibody Directed Against an Antigenic Determinant Common to Ogawa and Inaba Serotypes of Vibrio Cholerae O1 Proteins: Struct., Funct., Bio 2008 70 284 0 2UWZ CRYSTAL STRUCTURE OF WHEAT GERM AGGLUTININ ISOLECTIN 3 IN COMPLEX WITH A SYNTHETIC DIVALENT CARBOHYDRATE LIGAND 2007-03-26 2008-05-13 Schwefel, D.,Maierhofer, C.,Wittmann, V.,Diederichs, K.,Welte, W. Crystal Structure of Wheat Germ Agglutinin Isolectin 3 in Complex with a Synthetic Bivalent Carbohydrate Ligand To be Published 0 0 0 0 2VE7 CRYSTAL STRUCTURE OF A BONSAI VERSION OF THE HUMAN NDC80 COMPLEX 2007-10-17 2008-05-13 Ciferri, C.,Pasqualato, S.,Screpanti, E.,Varetti, G.,Santaguida, S.,Dos Reis, G.,Maiolica, A.,Polka, J.,De Luca, J.G.,De Wulf, P.,Salek, M.,Rappsilber, J.,Moores, C.A.,Salmon, E.D.,Musacchio, A. Implications for Kinetochore-Microtubule Attachment from the Structure of an Engineered Ndc80 Complex Cell(Cambridge,Mass.) 2008 133 427 0 2JGN DDX3 HELICASE DOMAIN 2007-02-13 2008-05-13 Rodamilans, B.,Montoya, G. Expression, Purification, Crystallization and Preliminary X-Ray Diffraction Analysis of the Ddx3 RNA Helicase Domain. Acta Crystallogr.,Sect.F 2007 63 283 0 2VL1 CRYSTAL STRUCTURE OF BETA-ALANINE SYNTHASE FROM SACCHAROMYCES KLUYVERI IN COMPLEX WITH THE A GLY-GLY PEPTIDE 2008-01-07 2008-05-13 Andersen, B.,Lundgren, S.,Dobritzsch, D.,Piskur, J. A Recruited Protease is Involved in Catabolism of Pyrimidines. J.Mol.Biol. 2008 379 243 0 3CX5 Structure of complex III with bound cytochrome c in reduced state and definition of a minimal core interface for electron transfer. 2008-04-23 2008-05-13 Solmaz, S.R.,Hunte, C. Structure of Complex III with Bound Cytochrome c in Reduced State and Definition of a Minimal Core Interface for Electron Transfer J.Biol.Chem. 2008 283 17542 17549 2VT1 CRYSTAL STRUCTURE OF THE CYTOPLASMIC DOMAIN OF SPA40, THE SPECIFICITY SWITCH FOR THE SHIGELLA FLEXNERI TYPE III SECRETION SYSTEM 2008-05-08 2008-05-20 Deane, J.E.,Graham, S.C.,Mitchell, E.P.,Flot, D.,Johnson, S.,Lea, S.M. Crystal Structure of Spa40, the Specificity Switch for the Shigella Flexneri Type III Secretion System To be Published 0 0 0 0 2VNN HUMAN BACE-1 IN COMPLEX WITH 7-ETHYL-N-((1S,2R)-2-HYDROXY-1-(PHENYLMETHYL)-3-(((3-(TRIFLUOROMETHYL)PHENYL)METHYL)AMINO) PROPYL)-1-METHYL-3,4-DIHYDRO-1H-(1,2,5)THIADIAZEPINO(3,4,5-HI)INDOLE-9-CARBOXAMIDE 2,2-DIOXIDE 2008-02-05 2008-05-20 Charrier, N.,Clarke, B.,Cutler, L.,Demont, E.,Dingwall, C.,Dunsdon, R.,East, P.,Hawkins, J.,Howes, C.,Hussain, I.,Jeffrey, P.,Maile, G.,Matico, R.,Mosley, J.,Naylor, A.,O'Brien, A.,Redshaw, S.,Rowland, P.,Soleil, V.,Smith, K.J.,Sweitzer, S.,Theobald, P.,Vesey, D.,Walter, D.S.,Wayne, G. Second Generation of Hydroxyethylamine Bace-1 Inhibitors: Optimizing Potency and Oral Bioavailability. J.Med.Chem. 2008 51 3313 0 2VNM HUMAN BACE-1 IN COMPLEX WITH 3-(1,1-DIOXIDOTETRAHYDRO-2H-1, 2-THIAZIN-2-YL)-5-(ETHYLAMINO)-N-((1S,2R)-2-HYDROXY-1-(PHENYLMETHYL)-3-(((3-(TRIFLUOROMETHYL)PHENYL)METHYL)AMINO) PROPYL)BENZAMIDE 2008-02-05 2008-05-20 Charrier, N.,Clarke, B.,Cutler, L.,Demont, E.,Dingwall, C.,Dunsdon, R.,East, P.,Hawkins, J.,Howes, C.,Hussain, I.,Jeffrey, P.,Maile, G.,Matico, R.,Mosley, J.,Naylor, A.,O'Brien, A.,Redshaw, S.,Rowland, P.,Soleil, V.,Smith, K.J.,Sweitzer, S.,Theobald, P.,Vesey, D.,Walter, D.S.,Wayne, G. Second Generation of Hydroxyethylamine Bace-1 Inhibitors: Optimizing Potency and Oral Bioavailability. J.Med.Chem. 2008 51 3313 0 2VSK HENDRA VIRUS ATTACHMENT GLYCOPROTEIN IN COMPLEX WITH HUMAN CELL SURFACE RECEPTOR EPHRINB2 2008-04-24 2008-05-20 Bowden, T.A.,Aricescu, A.R.,Gilbert, R.J.,Grimes, J.M.,Jones, E.Y.,Stuart, D.I. Structural Basis of Nipah and Hendra Virus Attachment to Their Cell-Surface Receptor Ephrin-B2 To be Published 0 0 0 0 3CS0 Crystal structure of DegP24 2008-04-08 2008-05-27 Krojer, T.,Sawa, J.,Schafer, E.,Saibil, H.R.,Ehrmann, M.,Clausen, T. Structural basis for the regulated protease and chaperone function of DegP Nature 2008 453 885 890 3CL5 Structure of coronavirus hemagglutinin-esterase in complex with 4,9-O-diacetyl sialic acid 2008-03-18 2008-06-03 Zeng, Q.,Langereis, M.A.,van Vliet, A.L.,Huizinga, E.G.,de Groot, R.J. Structure of coronavirus hemagglutinin-esterase offers insight into corona and influenza virus evolution. Proc.Natl.Acad.Sci.Usa 2008 105 9065 9069 3CSK Structure of DPP III from Saccharomyces cerevisiae 2008-04-10 2008-06-10 Baral, P.K.,Jajcanin, N.,Deller, S.,Macheroux, P.,Abramic, M.,Gruber, K. The first structure of dipeptidylpeptidase III (DPP III) provides insight into the catalytic mechanism and the mode of substrate binding To be Published 0 0 0 0 3D8D Crystal structure of the human Fe65-PTB1 domain 2008-05-23 2008-06-10 Radzimanowski, J.,Ravaud, S.,Schlesinger, S.,Koch, J.,Beyreuther, K.,Sinning, I.,Wild, K. Crystal structure of the human Fe65-PTB1 domain. J.Biol.Chem. 2008 283 23113 23120 3CEI Crystal Structure of Superoxide Dismutase from Helicobacter pylori 2008-02-29 2008-06-10 Esposito, L.,Seydel, A.,Aiello, R.,Sorrentino, G.,Cendron, L.,Zanotti, G.,Zagari, A. The crystal structure of the superoxide dismutase from Helicobacter pylori reveals a structured C-terminal extension Biochim.Biophys.Acta 2008 1784 1601 1606 2VLI STRUCTURE OF DEINOCOCCUS RADIODURANS TUNICAMYCIN RESISTANCE PROTEIN 2008-01-15 2008-06-17 Kapp, U.,Macedo, S.,Hall, D.R.,Leiros, I.,Mcsweeney, S.M.,Mitchell, E. Structure of Deinococcus Radiodurans Tunicamycin-Resistance Protein (Tmrd), a Phosphotransferase. Acta Crystallogr.,Sect.F 2008 64 479 0 2VP7 DECODING OF METHYLATED HISTONE H3 TAIL BY THE PYGO-BCL9 WNT SIGNALING COMPLEX 2008-02-26 2008-06-17 Fiedler, M.,Sanchez-Barrena, M.J.,Nekrasov, M.,Mieszczanek, J.,Rybin, V.,Muller, J.,Evans, P.,Bienz, M. Decoding of Methylated Histone H3 Tail by the Pygo-Bcl9 Wnt Signaling Complex. Molecular Cell 2008 30 507 0 3BNO Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (Br-derivative) 2007-12-14 2008-06-24 Kondo, J.,Westhof, E. The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates Nucleic Acids Res. 2008 36 2654 2666 3BNQ Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the Presence of SrCl2 (A1555G mutant, Br-derivative) 2007-12-14 2008-06-24 Kondo, J.,Westhof, E. The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates Nucleic Acids Res. 2008 36 2654 2666 3BNR Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the presence of nonspecifically bound paromomycin (A1555G mutant, Br-derivative) 2007-12-14 2008-06-24 Kondo, J.,Westhof, E. The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates Nucleic Acids Res. 2008 36 2654 2666 2VME STRUCTURE OF THE WILD-TYPE DISCOIDIN II FROM DICTYOSTELIUM DISCOIDEUM 2008-01-25 2008-07-01 Aragao, K.S.,Satre, M.,Imberty, A.,Varrot, A. Structure Determination of Discoidin II from Dictyostelium Discodeum and Carbohydrate Binding Properties of the Lectin Domain To be Published 0 0 0 0 2QEN The walker-type atpase paby2304 of pyrococcus abyssi 2007-06-26 2008-07-01 Uhring, M.,Bey, G.,Lecompte, O.,Moras, D.,Poch, O.,Cavarelli, J. The walker-type atpase paby2304 of pyrococcus abyssi To be Published 0 0 0 0 3D9B Symmetric structure of E. coli AcrB 2008-05-27 2008-07-01 Veesler, D.,Blangy, S.,Cambillau, C.,Sciara, G. There is a baby in the bath water: AcrB contamination is a major problem in membrane-protein crystallization. Acta Crystallogr.,Sect.F 2008 64 880 885 2V3I HYPOCREA JECORINA CEL7A IN COMPLEX WITH (R)-DIHYDROXY-PHENANTHRENOLOL 2007-06-18 2008-07-01 Fagerstrom, A.,Liljefors, T.,Stahlberg, J.,Sandgren, M.,Berg, U.,Isaksson, R. A Study of the Chiral Recognition Mechanisms of Cellobiohydrolase Cel7A for Ligands Based on the Beta-Blocker Motif: Crystal Structures, Microcalorimetry and Computational Modelling of Cel7A-Inhibitor Complexes. To be Published 0 0 0 0 3CQ5 Histidinol-phosphate aminotransferase from Corynebacterium glutamicum in complex with PMP 2008-04-02 2008-07-01 Marienhagen, J.,Sandalova, T.,Sahm, H.,Eggeling, L.,Schneider, G. Insights into the structural basis of substrate recognition by histidinol-phosphate aminotransferase from Corynebacterium glutamicum Acta Crystallogr.,Sect.D 2008 64 675 685 3CQ6 Histidinol-phosphate aminotransferase from Corynebacterium glutamicum holo-form (PLP covalently bound ) 2008-04-02 2008-07-01 Marienhagen, J.,Sandalova, T.,Sahm, H.,Eggeling, L.,Schneider, G. Insights into the structural basis of substrate recognition by histidinol-phosphate aminotransferase from Corynebacterium glutamicum Acta Crystallogr.,Sect.D 2008 64 675 685 3D67 Crystal structure of Thrombin-Activatable Fibrinolysis Inhibitor (TAFI) in complex with 2-guanidino-ethyl-mercaptosuccinic acid (GEMSA) 2008-05-19 2008-07-01 Marx, P.F.,Brondijk, T.H.,Plug, T.,Romijn, R.A.,Hemrika, W.,Meijers, J.C.M.,Huizinga, E.G. Crystal structures of TAFI elucidate the inactivation mechanism of activated TAFI: a novel mechanism for enzyme autoregulation Blood 2008 112 2803 2809 3D68 Crystal structure of a T325I/T329I/H333Y/H335Q mutant of Thrombin-Activatable Fibrinolysis Inhibitor (TAFI-IIYQ) 2008-05-19 2008-07-01 Marx, P.F.,Brondijk, T.H.,Plug, T.,Romijn, R.A.,Hemrika, W.,Meijers, J.C.M.,Huizinga, E.G. Crystal structures of TAFI elucidate the inactivation mechanism of activated TAFI: a novel mechanism for enzyme autoregulation Blood 2008 112 2803 2809 2VVN BTGH84 IN COMPLEX WITH NH-BUTYLTHIAZOLINE 2008-06-10 2008-07-01 Yuzwa, S.A.,Macauley, M.S.,Heinonen, J.E.,Shan, X.,Dennis, R.J.,He, Y.,Whitworth, G.E.,Stubbs, K.A.,Mceachern, E.J.,Davies, G.J.,Vocadlo, D.J. A Potent Mechanism-Inspired O-Glcnacase Inhibitor that Blocks Phosphorylation of Tau in Vivo To be Published 0 0 0 0 3CXU Structure of a Y149F mutant of epoxide hydrolase from Solanum tuberosum 2008-04-25 2008-07-08 Thomaeus, A.,Naworyta, A.,Mowbray, S.L.,Widersten, M. Removal of distal protein-water hydrogen bonds in a plant epoxide hydrolase increases catalytic turnover but decreases thermostability Protein Sci. 2008 17 1275 1284 3BX1 Complex between the Barley alpha-Amylase/Subtilisin Inhibitor and the subtilisin Savinase 2008-01-11 2008-07-08 Micheelsen, P.O.,Vevodova, J.,De Maria, L.,Ostergaard, P.R.,Friis, E.P.,Wilson, K.,Skjot, M. Structural and Mutational Analyses of the Interaction between the Barley alpha-Amylase/Subtilisin Inhibitor and the Subtilisin Savinase Reveal a Novel Mode of Inhibition J.Mol.Biol. 2008 380 681 690 3BX1 Complex between the Barley alpha-Amylase/Subtilisin Inhibitor and the subtilisin Savinase 2008-01-11 2008-07-08 Micheelsen, P.O.,Vevodova, J.,De Maria, L.,Ostergaard, P.R.,Friis, E.P.,Wilson, K.,Skjot, M. Structural and Mutational Analyses of the Interaction between the Barley alpha-Amylase/Subtilisin Inhibitor and the Subtilisin Savinase Reveal a Novel Mode of Inhibition J.Mol.Biol. 2008 380 681 690 2QJ6 Crystal structure analysis of a 14 repeat C-terminal fragment of toxin TcdA in Clostridium difficile 2007-07-06 2008-07-15 Albesa-Jove, D.,Bertrand, T.,Carpenter, L.,Lim, J.,Martinez, E.,Zhang, J.,Dmitri, I.,Brown, K.A.,Fairweather, N. Solution and crystal structures of the cell binding domain of toxins TcdA and TcdB from Clostridium difficile To be Published 0 0 0 0 2VUX HUMAN RIBONUCLEOTIDE REDUCTASE, SUBUNIT M2 B 2008-05-31 2008-07-15 Welin, M.,Moche, M.,Arrowsmith, C.H.,Berglund, H.,Busam, R.D.,Collins, R.,Dahlgren, L.G.,Edwards, A.M.,Flodin, S.,Flores, A.,Graslund, S.,Hammarstrom, M.,Herman, M.D.,Johansson, A.,Johansson, I.,Kallas, A.,Karlberg, T.,Kotenyova, T.,Lehtio, L.,Nilsson, M.E.,Nyman, T.,Persson, C.,Sagemark, J.,Schueler, H.,Svensson, L.,Thorsell, A.G.,Tresaugues, L.,Van Den Berg, S.,Weigelt, J.,Wikstrom, M.,Nordlund, P. Human Ribonucleotide Reductase, Subunit M2 B To be Published 0 0 0 0 2R51 Crystal Structure of mouse Vps26B 2007-09-02 2008-07-15 Collins, B.M.,Norwood, S.J.,Kerr, M.C.,Mahony, D.,Seaman, M.N.,Teasdale, R.D.,Owen, D.J. Structure of Vps26B and mapping of its interaction with the retromer protein complex. Traffic 2008 9 366 379 2JJA CRYSTAL STRUCTURE OF GNA WITH SYNTHETIC COPPER BASE PAIR 2008-03-28 2008-07-22 Schlegel, M.K.,Essen, L.-O.,Meggers, E. Duplex Structure of a Minimal Nucleic Acid. J.Am.Chem.Soc. 2008 130 8158 0 2R75 Aquifex aeolicus FtsZ with 8-morpholino-GTP 2007-09-07 2008-07-22 Lappchen, T.,Pinas, V.A.,Hartog, A.F.,Koomen, G.J.,Schaffner-Barbero, C.,Andreu, J.M.,Trambaiolo, D.,Lowe, J.,Juhem, A.,Popov, A.V.,den Blaauwen, T. Probing FtsZ and tubulin with C8-substituted GTP analogs reveals differences in their nucleotide binding sites Chem.Biol. 2008 15 189 199 2V6U HIGH RESOLUTION CRYSTAL STRUCTURE OF PTERIN-4A-CARBINOLAMINE DEHYDRATASE FROM TOXOPLASMA GONDII 2007-07-20 2008-07-22 Cameron, S.,Fyffe, S.A.,Goldie, S.P.,Hunter, W.N. Crystal Structures of Toxoplasma Gondii Pterin-4A-Carbinolamine Dehydratase and Comparisons with Mammalian and Parasite Orthologues. Mol.Biochem.Parasitol. 2008 158 131 0 2V5T CRYSTAL STRUCTURE OF NCAM2 IG2-3 2007-07-10 2008-07-29 Kulahin, N.,Rasmussen, K.,Christensen, O.,Berezin, V.,Bock, E.,Walmod, P.,Gajhede, M. Crystal Structure of Ncam2 Ig2-3 To be Published 0 0 0 0 3DAW Structure of the actin-depolymerizing factor homology domain in complex with actin 2008-05-30 2008-07-29 Paavilainen, V.O.,Oksanen, E.,Goldman, A.,Lappalainen, P. Structure of the actin-depolymerizing factor homology domain in complex with actin J.Cell Biol. 2008 182 51 59 3CF6 Structure of Epac2 in complex with cyclic-AMP and Rap 2008-03-02 2008-07-29 Rehmann, H.,Arias-Palomo, E.,Hadders, M.A.,Schwede, F.,Llorca, O.,Bos, J.L. Structure of Epac2 in complex with a cyclic AMP analogue and RAP1B Nature 2008 455 124 127 2VS1 THE CRYSTAL STRUCTURE OF PYROCOCCUS ABYSSI TRNA (URACIL-54, C5)-METHYLTRANSFERASE IN COMPLEX WITH S-ADENOSYL-L-HOMOCYSTEINE 2008-04-17 2008-08-05 Walbott, H.,Leulliot, N.,Grosjean, H.,Golinelli-Pimpaneau, B. The Crystal Structure of Pyrococcus Abyssi tRNA (Uracil-54, C5)-Methyltransferase Provides Insights Into its tRNA Specificity. Nucleic Acids Res. 2008 36 4929 0 3CUR Structure of a double methionine mutant of NI-FE hydrogenase 2008-04-17 2008-08-05 Leroux, F.,Dementin, S.,Burlat, B.,Cournac, L.,Volbeda, A.,Champ, S.,Martin, L.,Guigliarelli, B.,Bertrand, P.,Fontecilla-Camps, J.,Rousset, M. Experimental approaches to kinetics of gas diffusion in hydrogenase Proc.Natl.Acad.Sci.Usa 2008 105 11188 11193 2VQ5 X-RAY STRUCTURE OF NORCOCLAURINE SYNTHASE FROM THALICTRUM FLAVUM IN COMPLEX WITH DOPAMINE AND HYDROXYBENZALDEHYDE 2008-03-11 2008-08-05 Ilari, A.,Franceschini, S.,Bonamore, A.,Arenghi, F.,Botta, B.,Pasquo, A.,Tafi, A.,Boffi, A. Structural Basis of Enzymatic S-Norcoclaurine Biosynthesis To be Published 0 0 0 0 2VVJ IRISFP FLUORESCENT PROTEIN IN ITS RED FORM, CIS CONFORMATION 2008-06-09 2008-08-12 Adam, V.,Lelimousin, M.,Boehme, S.,Desfonds, G.,Nienhaus, K.,Field, M.J.,Wiedenmann, J.,Mcsweeney, S.,Nienhaus, G.U.,Bourgeois, D. Structural Characterization of Irisfp, an Optical Highlighter Undergoing Multiple Photo-Induced Transformations To be Published 0 0 0 0 3DEO Structural basis for specific substrate recognition by the chloroplast signal recognition particle protein cpSRP43 2008-06-10 2008-08-12 Stengel, K.F.,Holdermann, I.,Cain, P.,Robinson, C.,Wild, K.,Sinning, I. Structural basis for specific substrate recognition by the chloroplast signal recognition particle protein cpSRP43. Science 2008 321 253 256 3DKP Human DEAD-box RNA-helicase DDX52, conserved domain I in complex with ADP 2008-06-25 2008-08-12 Lehtio, L.,Karlberg, T.,Andersson, J.,Arrowsmith, C.H.,Berglund, H.,Collins, R.,Dahlgren, L.G.,Edwards, A.M.,Flodin, S.,Flores, A.,Graslund, S.,Hammarstrom, M.,Johansson, A.,Johansson, I.,Kotenyova, T.,Moche, M.,Nilsson, M.E.,Nordlund, P.,Nyman, T.,Olesen, K.,Persson, C.,Sagemark, J.,Thorsell, A.G.,Tresaugues, L.,van den Berg, S.,Welin, M.,Wisniewska, M.,Wikstrom, M.,Schueler, H. Human DEAD-box RNA-helicase DDX52, conserved domain I in complex with ADP. To be Published 0 0 0 0 3C71 Struture of a ResA variant with a DsbA-like active site motif (CPHC) 2008-02-06 2008-08-12 Lewin, A.,Crow, A.,Hodson, C.T.,Hederstedt, L.,Le Brun, N.E. Effects of substitutions in the CXXC active-site motif of the extracytoplasmic thioredoxin ResA. Biochem.J. 2008 414 81 91 3C73 Structure of CEHC variant ResA 2008-02-06 2008-08-12 Lewin, A.,Crow, A.,Hodson, C.T.,Hederstedt, L.,Le Brun, N.E. Effects of substitutions in the CXXC active-site motif of the extracytoplasmic thioredoxin ResA. Biochem.J. 2008 414 81 91 2V7T X-RAY CRYSTAL STRUCTURE OF 5'-FLUORODEOXYADENOSINE SYNTHASE S158G MUTANT COMPLEXED WITH S-ADENOSYL-L-HOMOCYSTEINE AND CHLORIDE ION 2007-08-01 2008-08-12 Zhu, X.,Robinson, D.A.,Mcewan, A.R.,O'Hagan, D.,Naismith, J.H. Mechanism of Enzymatic Fluorination in Streptomyces Cattleya. J.Am.Chem.Soc. 2007 129 14597 0 2VXB STRUCTURE OF THE CRB2-BRCT2 DOMAIN 2008-07-03 2008-08-12 Kilkenny, M.L.,Dore, A.,Roe, S.M.,Nestoras, K.,Ho, J.C.Y.,Watts, F.Z.,Pearl, L.H. Structural and Functional Analysis of the Crb2-Brct2 Domain Reveals Distinct Roles in Checkpoint Signaling and DNA Damage Repair. Genes Dev. 2008 22 2034 0 3E1S Structure of an N-terminal truncation of Deinococcus radiodurans RecD2 2008-08-04 2008-08-19 Saikrishnan, K.,Griffiths, S.P.,Cook, N.,Court, R.,Wigley, D.B. DNA binding to RecD: role of the 1B domain in SF1B helicase activity. Embo J. 2008 27 2222 2229 2JK3 CRYSTAL STRUCTURE OF THE HLYIIR MUTANT PROTEIN WITH RESIDUES 169-186 SUBSTITUTED BY GSSGSSG LINKER 2008-08-11 2008-08-19 Kovalevskiy, O.V.,Solonin, A.S.,Antson, A.A. Crystal Structure of the Hlyiir Mutant Protein with Residues 169-186 Substituted by Gssgssg Linker To be Published 0 0 0 0 2VPA HIGH RESOLUTION CRYSTAL STRUCTURE OF THE ANTIBIOTIC RESISTANCE PROTEIN NIMA FROM DEINOCOCCUS RADIODURANS 2008-02-27 2008-08-19 Leiros, H.-K.S.,Tedesco, C.,Mcsweeney, S.M. High Resolution Crystal Structure of the Antibiotic Resistance Protein Nima from Deinococcus Radiodurans Acta Crystallogr.,Sect.F 2008 64 442 0 3D8B Crystal structure of human fidgetin-like protein 1 in complex with ADP 2008-05-23 2008-08-26 Karlberg, T.,Wisniewska, M.,Andersson, J.,Arrowsmith, C.H.,Berglund, H.,Busam, R.D.,Collins, R.,Dahlgren, L.G.,Edwards, A.M.,Flodin, S.,Flores, A.,Graslund, S.,Hammarstrom, M.,Johansson, A.,Johansson, I.,Kallas, A.,Kotenyova, T.,Lehtio, L.,Moche, M.,Nilsson, M.E.,Nordlund, P.,Nyman, T.,Olesen, K.,Persson, C.,Sagemark, J.,Thorsell, A.G.,Tresaugues, L.,Van Den Berg, S.,Welin, M.,Wikstrom, M.,Schuler, H. Human fidgetin-like protein 1. To be Published 0 0 0 0 2VW5 STRUCTURE OF THE HSP90 INHIBITOR 7-O-CARBAMOYLPREMACBECIN BOUND TO THE N- TERMINUS OF YEAST HSP90 2008-06-16 2008-09-02 Zhang, M.Q.,Gaisser, S.,Nur-E-Alam, M.,Sheehan, L.S.,Vousden, W.A.,Gaitatzis, N.,Peck, G.,Coates, N.J.,Moss, S.J.,Radzom, M.,Foster, T.A.,Sheridan, R.M.,Gregory, M.A.,Roe, S.M.,Prodromou, C.,Pearl, L.H.,Boyd, S.M.,Wilkinson, B.,Martin, C.J. Optimizing Natural Products by Biosynthetic Engineering: Discovery of Nonquinone Hsp90 Inhibitors. J.Med.Chem. 2008 51 5494 0 3DS4 HIV-1 capsid C-terminal domain mutant (L211S) in complex with an inhibitor of particle assembly (CAI) 2008-07-11 2008-09-02 Bartonova, V.,Igonet, S.,Sticht, J.,Glass, B.,Habermann, A.,Vaney, M.-C.,Sehr, P.,Lewis, J.,Rey, F.A.,Krausslich, H.-G. Residues in the HIV-1 capsid assembly inhibitor binding site are essential for maintaining the assembly competent quaternary structure of the capsid protein To be Published 0 0 0 0 2VY6 TWO DOMAINS FROM THE C-TERMINAL REGION OF INFLUENZA A VIRUS POLYMERASE PB2 SUBUNIT 2008-07-18 2008-09-09 Tarendeau, F.,Crepin, T.,Guilligay, D.,Ruigrok, R.,Cusack, S.,Hart, D. Host Determinant Residue Lysine 627 Lies on the Surface of a Discrete, Folded Domain of Influenza Virus Polymerase Pb2 Subunit Plos Pathog. 2008 4 136 0 2VAK CRYSTAL STRUCTURE OF THE AVIAN REOVIRUS INNER CAPSID PROTEIN SIGMAA 2007-09-01 2008-09-09 Guardado-Calvo, P.,Vazquez-Iglesias, L.,Martinez-Costas, J.,Llamas-Saiz, A.L.,Schoehn, G.,Fox, G.C.,Hermo-Parrado, X.L.,Benavente, J.,Van Raaij, M.J. Crystal Structure of the Avian Reovirus Inner Capsid Protein Sigmaa To be Published 0 0 0 0 3DH1 Crystal structure of human tRNA-specific adenosine-34 deaminase subunit ADAT2 2008-06-16 2008-09-09 Welin, M.,Tresaugues, L.,Andersson, J.,Arrowsmith, C.H.,Berglund, H.,Collins, R.,Dahlgren, L.G.,Edwards, A.M.,Flodin, S.,Flores, A.,Graslund, S.,Hammarstrom, M.,Johansson, A.,Johansson, I.,Karlberg, T.,Kotenyova, T.,Lehtio, L.,Moche, M.,Nilsson, M.E.,Nyman, T.,Olesen, K.,Persson, C.,Sagemark, J.,Schueler, H.,Thorsell, A.G.,van der Berg, S.,Wisniewska, M.,Wikstrom, M.,Nordlund, P. Crystal structure of human tRNA-specific adenosine-34 deaminase subunit ADAT2. To be Published 0 0 0 0 2VX5 CELLVIBRIO JAPONICUS MANNANASE CJMAN26C MANNOSE-BOUND FORM 2008-07-01 2008-09-16 Cartmell, A.,Topakas, E.,Ducros, V.M.-A.,Suits, M.D.L.,Davies, G.J.,Gilbert, H.J. The Cellvibrio Japonicus Mannanase Cjman26C Displays a Unique Exo- Mode of Action that is Conferred by Subtle Changes to the Distal Region of the Active Site To be Published 0 0 0 0 2VX6 CELLVIBRIO JAPONICUS MANNANASE CJMAN26C GAL1MAN4-BOUND FORM 2008-07-01 2008-09-16 Cartmell, A.,Topakas, E.,Ducros, V.M.-A.,Suits, M.D.L.,Davies, G.J.,Gilbert, H.J. The Cellvibrio Japonicus Mannanase Cjman26C Displays a Unique Exo- Mode of Action that is Conferred by Subtle Changes to the Distal Region of the Active Site To be Published 0 0 0 0 2V4Y THE STRUCTURE OF E. COLI UMP KINASE IN COMPLEX WITH ITS ALLOSTERIC REGULATOR GTP 2008-09-30 2008-10-21 Meyer, P.,Evrin, C.,Briozzo, P.,Joly, N.,Barzu, O.,Gilles, A.M. Structural and Functional Characterization of Escherichia Coli Ump Kinase in Complex with its Allosteric Regulator GTP. To be Published 0 0 0 0 2W0S CRYSTAL STRUCTURE OF VACCINIA VIRUS THYMIDYLATE KINASE BOUND TO BRIVUDIN-5'-MONOPHOSPHATE 2008-10-08 2008-10-21 Caillat, C.,Topalis, D.,Agrofoglio, L.A.,Pochet, S.,Balzarini, J.,Deville-Bonne, D.,Meyer, P. Crystal Structure of Poxvirus Thymidylate Kinase: An Unexpected Dimerization Has Implications for Antiviral Therapy Proc.Natl.Acad.Sci.USA 2008 105 16900 0 2JLC CRYSTAL STRUCTURE OF E.COLI MEND, 2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXADIENE-1-CARBOXYLATE SYNTHASE - NATIVE PROTEIN 2008-09-08 2008-10-21 Dawson, A.,Fyfe, P.K.,Hunter, W.N. Specificity and Reactivity in Menaquinone Biosynthesis; the Structure of Escherichia Coli Mend [2-Succinyl-5-Enolpyruvyl-6-Hydroxy-3-Cyclohexadiene-1-Carboxylate Synthase]. To be Published 0 0 0 0 2VCT GLUTATHIONE TRANSFERASE A2-2 IN COMPLEX WITH DELTA-4-ANDOSTRENE-3-17-DIONE 2007-09-27 2008-10-28 Tars, K.,Olin, B.,Mannervik, B. Structural Basis of Steroid Isomerase Activity of Alpha Class Glutathione Transferases To be Published 0 0 0 0 2VZD CRYSTAL STRUCTURE OF THE C-TERMINAL CALPONIN HOMOLOGY DOMAIN OF ALPHA PARVIN IN COMPLEX WITH PAXILLIN LD1 MOTIF 2008-07-31 2008-10-28 Lorenz, S.,Vakonakis, I.,Lowe, E.D.,Campbell, I.D.,Noble, M.E.M.,Hoellerer, M.K. Structural Analysis of the Interactions between Paxillin Ld Motifs and Alpha-Parvin Structure 2008 16 1521 0 3F0W Human NUMB-like protein, phosphotyrosine interaction domain 2008-10-27 2008-11-04 Lehtio, L.,Moche, M.,Andersson, J.,Arrowsmith, C.H.,Berglund, H.,Bountra, C.,D Busam, R.,Collins, R.,Dahlgren, L.G.,Edwards, A.M.,Flodin, S.,Flores, A.,Graslund, S.,Hammarstrom, M.,Johansson, A.,Johansson, I.,Karlberg, T.,Kotenyova, T.,Nilsson, M.E.,Nyman, T.,Persson, C.,Sagemark, J.,Schueler, H.,Thorsell, A.G.,Tresaugues, L.,Van Den Berg, S.,Weigelt, J.,Welin, M.,Wikstrom, M.,Wisniewska, M.,Nordlund, P. Human NUMB-like protein, phosphotyrosine interaction domain To be Published 0 0 0 0 2W2Q PCSK9-DELTAC D374H MUTANT BOUND TO WT EGF-A OF LDLR 2008-11-03 2008-11-18 Bottomley, M.J.,Cirillo, A.,Orsatti, L.,Ruggeri, L.,Fisher, T.S.,Santoro, J.C.,Cummings, R.T.,Cubbon, R.M.,Lo Surdo, P.,Calzetta, A.,Noto, A.,Mattu, M.,De Francesco, R.,Sparrow, C.P.,Talamo, F.,Sitlani, A.,Carfi, A. Structural and Biochemical Characterization of the Wild Type Pcsk9/Egf-Ab Complex and Natural Fh Mutants To be Published 0 0 0 0 2W2M WT PCSK9-DELTAC BOUND TO WT EGF-A OF LDLR 2008-11-03 2008-11-18 Bottomley, M.J.,Cirillo, A.,Orsatti, L.,Ruggeri, L.,Fisher, T.S.,Santoro, J.C.,Cummings, R.T.,Cubbon, R.M.,Lo Surdo, P.,Calzetta, A.,Noto, A.,Mattu, M.,De Francesco, R.,Sparrow, C.P.,Talamo, F.,Sitlani, A.,Carfi, A. Structural and Biochemical Characterization of the Wild Type Pcsk9/Egf-Ab Complex and Natural Fh Mutants To be Published 0 0 0 0