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Structure 2003 11 423 433 1O7U RADIATION INDUCED TRYPAREDOXIN-I 2002-11-14 2003-04-24 Alphey, M.S.,Gabrielsen, M.,Micossi, E.,Leonard, G.,Mcsweeney, S.M.,Ravelli, R.B.G.,Tetaud, E.,Fairlamb, A.H.,Bond, C.S.,Hunter, W.N. Tryparedoxins from Crithidia Fasciculata and Trypanosoma Brucei: Photoreduction of the Redox Disulfide Using Synchrotron Radiation and Evidence for a Conformational Switch Implicated in Function To be Published 0 0 0 0 1O85 RADIATION-REDUCED TRYPAREDOXIN-I 2002-11-25 2003-04-24 Alphey, M.S.,Gabrielsen, M.,Micossi, E.,Leonard, G.,Mcsweeney, S.M.,Ravelli, R.B.G.,Tetaud, E.,Fairlamb, A.H.,Bond, C.S.,Hunter, W.N. 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Crystal Structure of Thermotoga Maritima A-L-Fucosidase: Insights Into Catalytic Mechanism and the Molecular Basis for Fucosidosis To be Published 0 0 0 0 1UTD THE STRUCTURE OF THE TRP RAN-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO A 63-NUCLEOTIDE RNA MOLECULE CONTAINING GAGUUU REPEATS 2003-12-08 2004-01-15 Hopcroft, N.H.,Manfredo, A.,Wendt, A.L.,Brzozowski, A.M.,Gollnick, P.,Antson, A.A. The interaction of RNA with TRAP: the role of triplet repeats and separating spacer nucleotides. J.Mol.Biol. 2004 338 43 53 1UTF THE STRUCTURE OF THE TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO A RNA MOLECULE CONTAINING UAGAU REPEATS (PART I) 2003-12-08 2004-01-15 Hopcroft, N.H.,Manfredo, A.,Wendt, A.L.,Brzozowski, A.M.,Gollnick, P.,Antson, A.A. The interaction of RNA with TRAP: the role of triplet repeats and separating spacer nucleotides. J.Mol.Biol. 2004 338 43 53 1UTV THE STRUCTURE OF THE TRP RNA-BINDING ATTENUATION PROTEIN (TRAP) BOUND TO A RNA MOLECULE CONTAINING UAGAU REPEATS (PART II) 2003-12-08 2004-01-15 Hopcroft, N.H.,Manfredo, A.,Wendt, A.L.,Brzozowski, A.M.,Gollnick, P.,Antson, A.A. The interaction of RNA with TRAP: the role of triplet repeats and separating spacer nucleotides. J.Mol.Biol. 2004 338 43 53 1OGK THE CRYSTAL STRUCTURE OF TRYPANOSOMA CRUZI DUTPASE IN COMPLEX WITH DUDP 2003-05-07 2004-01-22 Harkiolaki, M.,Dodson, E.J.,Bernier-Villamor, V.,Turkenburg, J.P.,Gonzalez-Pacanowska, D.,Wilson, K.S. The crystal structure of Trypanosoma cruzi dUTPase reveals a novel dUTP/dUDP binding fold. Structure 2004 12 41 53 1OL0 CRYSTAL STRUCTURE OF A CAMELISED HUMAN VH 2003-08-02 2004-01-22 Dottorini, T.,Vaughan, C.K.,Walsh, M.A.,LoSurdo, P.,Sollazzo, M. Crystal structure of a human VH: requirements for maintaining a monomeric fragment. Biochemistry 2004 43 622 628 1RYF Alternative Splicing of Rac1 Generates Rac1b, a Self-activating GTPase 2003-12-22 2004-01-27 Fiegen, D.,Haeusler, L.C.,Blumenstein, L.,Herbrand, U.,Dvorsky, R.,Vetter, I.R.,Ahmadian, M.R. Alternative Splicing of Rac1 Generates Rac1b, a Self-activating GTPase J.Biol.Chem. 2004 279 4743 4749 1RYH Alternative Splicing of Rac1 Generates Rac1b, a Self-activating GTPase 2003-12-22 2004-01-27 Fiegen, D.,Haeusler, L.C.,Blumenstein, L.,Herbrand, U.,Dvorsky, R.,Vetter, I.R.,Ahmadian, M.R. Alternative Splicing of Rac1 Generates Rac1b, a Self-activating GTPase J.Biol.Chem. 2004 279 4743 4749 1HK7 MIDDLE DOMAIN OF HSP90 2003-03-06 2004-01-29 Meyer, P.,Prodromou, C.,Hu, B.,Vaughan, C.,Roe, S.M.,Panaretou, B.,Piper, P.W.,Pearl, L.H. Structural and functional analysis of the middle segment of hsp90: implications for ATP hydrolysis and client protein and cochaperone interactions. Mol.Cell 2003 11 647 658 1RJ4 Structure of a Cell Wall Invertase Inhibitor from Tobacco in Complex with Cd2+ 2003-11-18 2004-02-03 Hothorn, M.,D'Angelo, I.,Marquez, J.A.,Greiner, S.,Scheffzek, K. The invertase inhibitor Nt-CIF from tobacco: a highly thermostable four-helix bundle with an unusual N-terminal extension J.Mol.Biol. 2004 335 987 995 1Q84 Crystal structure of the mouse acetylcholinesterase-TZ2PA6 anti complex 2003-08-20 2004-02-10 Bourne, Y.,Kolb, H.C.,Radic, Z.,Sharpless, K.B.,Taylor, P.,Marchot, P. Freeze-frame inhibitor captures acetylcholinesterase in a unique conformation. Proc.Natl.Acad.Sci.Usa 2004 101 1449 1454 1RQP Crystal structure and mechanism of a bacterial fluorinating enzyme 2003-12-06 2004-03-02 Dong, C.,Huang, F.,Deng, H.,Schaffrath, C.,Spencer, J.B.,O'Hagan, D.,Naismith, J.H. Crystal structure and mechanism of a bacterial fluorinating enzyme Nature 2004 427 561 565 1UU3 STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH LY333531 2003-12-15 2004-03-04 Komander, D.,Kular, G.S.,Schuttelkopf, A.W.,Deak, M.,Prakash, K.R.,Bain, J.,Elliott, M.,Garrido-Franco, M.,Kozikowski, A.P.,Alessi, D.R.,van Aalten, D.M. Interactions of LY333531 and other bisindolyl maleimide inhibitors with PDK1. Structure 2004 12 215 226 1UU7 STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-2 2003-12-16 2004-03-04 Komander, D.,Kular, G.S.,Schuttelkopf, A.W.,Deak, M.,Prakash, K.R.,Bain, J.,Elliott, M.,Garrido-Franco, M.,Kozikowski, A.P.,Alessi, D.R.,van Aalten, D.M. Interactions of LY333531 and other bisindolyl maleimide inhibitors with PDK1. Structure 2004 12 215 226 1HKK HIGH RESOULTION CRYSTAL STRUCTURE OF HUMAN CHITINASE IN COMPLEX WITH ALLOSAMIDIN 2003-03-10 2004-03-11 Rao, F.V.,Houston, D.R.,Boot, R.G.,Aerts, J.M.,Sakuda, S.,van Aalten, D.M. Crystal structures of allosamidin derivatives in complex with human macrophage chitinase. J.Biol.Chem. 2003 278 20110 20116 1HKM HIGH RESOLUTION CRYSTAL STRUCTURE OF HUMAN CHITINASE IN COMPLEX WITH DEMETHYLALLOSAMIDIN 2003-03-10 2004-03-11 Rao, F.V.,Houston, D.R.,Boot, R.G.,Aerts, J.M.,Sakuda, S.,van Aalten, D.M. Crystal structures of allosamidin derivatives in complex with human macrophage chitinase. J.Biol.Chem. 2003 278 20110 20116 1UMZ XYLOGLUCAN ENDOTRANSGLYCOSYLASE IN COMPLEX WITH THE XYLOGLUCAN NONASACCHARIDE XLLG. 2003-09-03 2004-03-18 Johansson, P.,Brumer, H.,Baumann, M.J.,Kallas, A.M.,Henriksson, H.,Denman, S.E.,Teeri, T.T.,Jones, T.A. Crystal structures of a poplar xyloglucan endotransglycosylase reveal details of transglycosylation acceptor binding. Plant Cell 2004 16 874 886 1USX CRYSTAL STRUCTURE OF THE NEWCASTLE DISEASE VIRUS HEMAGGLUTININ-NEURAMINIDASE COMPLEXED WITH THIOSIALOSIDE 2003-12-01 2004-03-19 Zaitsev, V.,von Itzstein, M.,Groves, D.,Kiefel, M.,Takimoto, T.,Portner, A.,Taylor, G. Second sialic acid binding site in Newcastle disease virus hemagglutinin-neuraminidase: implications for fusion. J.Virol. 2004 78 3733 3741 1S2A Crystal structures of prostaglandin D2 11-ketoreductase in complex with the non-steroidal anti-inflammatory drugs flufenamic acid and indomethacin 2004-01-08 2004-03-23 Lovering, A.L.,Ride, J.P.,Bunce, C.M.,Desmond, J.C.,Cummings, S.M.,White, S.A. Crystal structures of prostaglandin D(2) 11-ketoreductase (AKR1C3) in complex with the nonsteroidal anti-inflammatory drugs flufenamic acid and indomethacin. Cancer Res. 2004 64 1802 1810 1S2C Crystal structures of prostaglandin D2 11-ketoreductase in complex with the non-steroidal anti-inflammatory drugs flufenamic acid and indomethacin 2004-01-08 2004-03-23 Lovering, A.L.,Ride, J.P.,Bunce, C.M.,Desmond, J.C.,Cummings, S.M.,White, S.A. Crystal structures of prostaglandin D(2) 11-ketoreductase (AKR1C3) in complex with the nonsteroidal anti-inflammatory drugs flufenamic acid and indomethacin. Cancer Res. 2004 64 1802 1810 1S2Q Crystal structure of MAOB in complex with N-propargyl-1(R)-aminoindan (Rasagiline) 2004-01-09 2004-03-30 Binda, C.,Li, M.,Herzig, Y.,Sterling, J.,Edmondson, D.E.,Mattevi, A. Crystal Structures of Monoamine Oxidase B in Complex with Four Inhibitors of the N-Propargylaminoindan Class. J.Med.Chem. 2004 47 1767 1774 1S2Y Crystal structure of MAOB in complex with N-propargyl-1(S)-aminoindan 2004-01-12 2004-03-30 Binda, C.,Li, M.,Herzig, Y.,Sterling, J.,Edmondson, D.E.,Mattevi, A. Crystal Structures of Monoamine Oxidase B in Complex with Four Inhibitors of the N-Propargylaminoindan Class. J.Med.Chem. 2004 47 1767 1774 1VJM Deformation of helix C in the low-temperature L-intermediate of bacteriorhodopsin 2004-03-12 2004-04-06 Edman, K.,Royant, A.,Larsson, G.,Jacobson, F.,Taylor, T.,van der Spoel, D.,Landau, E.M.,Pebay-Peyroula, E.,Neutze, R. Deformation of helix C in the low temperature L-intermediate of bacteriorhodopsin. J.Biol.Chem. 2004 279 2147 2158 1USP ORGANIC HYDROPEROXIDE RESISTANCE PROTEIN FROM DEINOCOCCUS RADIODURANS 2003-11-27 2004-04-08 Meunier-Jamin, C.,Kapp, U.,Leonard, G.A.,McSweeney, S. The structure of the organic hydroperoxide resistance protein from Deinococcus radiodurans. Do conformational changes facilitate recycling of the redox disulfide? J.Biol.Chem. 2004 279 25830 25837 1NH0 1.03 A structure of HIV-1 protease: inhibitor binding inside and outside the active site 2002-12-18 2004-04-13 Brynda, J.,Rezacova, P.,Fabry, M.,Horejsi, M.,Stouracova, R.,Sedlacek, J.,Soucek, M.,Hradilek, M.,Lepsik, M.,Konvalinka, J. A Phenylnorstatine Inhibitor Binding to HIV-1 Protease: Geometry, Protonation, and Subsite-Pocket Interactions Analyzed at Atomic Resolution J.Med.Chem. 2004 47 2030 2036 1R4F Inosine-Adenosine-Guanosine Preferring Nucleoside Hydrolase From Trypanosoma vivax: Trp260Ala Mutant In Complex With 3-Deaza-Adenosine 2003-10-06 2004-04-13 Versees, W.,Loverix, S.,Vandemeulebroucke, A.,Geerlings, P.,Steyaert, J. Leaving group activation by aromatic stacking: an alternative to general Acid catalysis. J.Mol.Biol. 2004 338 1 6 1OFN PURIFICATION, CRYSTALLISATION AND PRELIMINARY STRUCTURAL STUDIES OF DTDP-4-KETO-6-DEOXY-GLUCOSE-5-EPIMERASE (EVAD) FROM AMYCOLATOPSIS ORIENTALIS; THE FOURTH ENZYME IN THE DTDP-L-EPIVANCOSAMINE BIOSYNTHETIC PATHWAY. 2003-04-17 2004-04-15 Merkel, A.B.,Temple, G.K.,Burkart, M.D.,Losey, H.C.,Beis, K.,Walsh, C.T.,Naismith, J.H. Purification, crystallization and preliminary structural studies of dTDP-4-keto-6-deoxy-glucose-5-epimerase (EvaD) from Amycolatopsis orientalis, the fourth enzyme in the dTDP-L-epivancosamine biosynthetic pathway. Acta Crystallogr.,Sect.D 2002 58 1226 1228 1OQU A protein coordinated tri-nuclear Fe complex formed during soaking of crystals of the ribonucleotide reductase R2F protein from Corynebacterium Ammoniagenes 2003-03-11 2004-04-20 Hogbom, M.,Nordlund, P. A protein carboxylate coordinated oxo-centered tri-nuclear iron complex with possible implications for ferritin mineralization Febs Lett. 2004 567 179 182 1Q92 Crystal structure of human mitochondrial deoxyribonucleotidase in complex with the inhibitor PMcP-U 2003-08-22 2004-04-20 Rinaldo-Matthis, A.,Rampazzo, C.,Balzarini, J.,Reichard, P.,Bianchi, V.,Nordlund, P. Crystal structures of the mitochondrial deoxyribonucleotidase in complex with two specific inhibitors Mol.Pharmacol. 2004 65 860 867 1RY9 Spa15, a Type III Secretion Chaperone from Shigella flexneri 2003-12-20 2004-04-27 van Eerde, A.,Hamiaux, C.,Perez, J.,Parsot, C.,Dijkstra, B.W. Structure of Spa15, a type III secretion chaperone from Shigella flexneri with broad specificity. Embo Rep. 2004 5 477 483 1UQX RALSTONIA SOLANACEARUM LECTIN (RS-IIL) IN COMPLEX WITH ALPHA-METHYLMANNOSIDE 2003-10-22 2004-04-28 Sudakevitz, D.,Kostlanova, N.,Blatman-Jan, G.,Mitchell, E.P.,Lerrer, B.,Wimmerova, M.,Katcoff, D.J.,Imberty, A.,Gilboa-Garber, N. A new Ralstonia solanacearum high-affinity mannose-binding lectin RS-IIL structurally resembling the Pseudomonas aeruginosa fucose-specific lectin PA-IIL. Mol.Microbiol. 2004 52 691 700 1Q8F Crystal Structure of the E.coli pyrimidine nucleoside hydrolase yeiK 2003-08-21 2004-05-11 Giabbai, B.,Degano, M. Crystal structure to 1.7 a of the Escherichia coli pyrimidine nucleoside hydrolase YeiK, a novel candidate for cancer gene therapy. STRUCTURE 2004 12 739 749 1MQO Metallo-beta-lactamase BcII Cd substituted from Bacillus cereus at 1.35 angstroms resolution 2002-09-17 2004-05-18 Garcia-Saez, I.,Chantalat, L.,Dideberg, O. High resolution structure of the Cd substituted BcII from Bacillus cereus To be Published 0 0 0 0 1Q0G Crystal structure of Ni-containing superoxide dismutase with Ni-ligation corresponding to the state after full x-ray-induced reduction 2003-07-16 2004-05-18 Wuerges, J.,Lee, J.-W.,Yim, Y.-I.,Yim, H.-S.,Kang, S.-O.,Djinovic Carugo, K. Crystal structure of nickel-containing superoxide dismutase reveals another type of active site Proc.Natl.Acad.Sci.USA 2004 101 8569 8574 1Q5M Binary complex of rabbit 20alpha-hydroxysteroid dehydrogenase with NADPH 2003-08-08 2004-05-18 Couture, J.F.,Legrand, P.,Cantin, L.,Labrie, F.,Luu-The, V.,Breton, R. Loop Relaxation, A Mechanism that Explains the Reduced Specificity of Rabbit 20alpha-Hydroxysteroid Dehydrogenase, A Member of the Aldo-Keto Reductase Superfamily. J.Mol.Biol. 2004 339 89 102 1S0I Trypanosoma cruzi trans-sialidase in complex with sialyl-lactose (Michaelis complex) 2003-12-31 2004-05-18 Amaya, M.F.,Watts, A.G.,Damager, I.,Wehenkel, A.,Nguyen, T.,Buschiazzo, A.,Paris, G.,Frasch, A.C.,Withers, S.G.,Alzari, P.M. Structural Insights into the Catalytic Mechanism of Trypanosoma cruzi trans-Sialidase. Structure 2004 12 775 784 1S0J Trypanosoma cruzi trans-sialidase in complex with MuNANA (Michaelis complex) 2003-12-31 2004-05-18 Amaya, M.F.,Watts, A.G.,Damager, I.,Wehenkel, A.,Nguyen, T.,Buschiazzo, A.,Paris, G.,Frasch, A.C.,Withers, S.G.,Alzari, P.M. Structural Insights into the Catalytic Mechanism of Trypanosoma cruzi trans-Sialidase. Structure 2004 12 775 784 1V03 CRYSTAL STRUCTURE OF THE SORGHUM BICOLOR DHURRINASE 1 2004-03-22 2004-05-20 Verdoucq, L.,Moriniere, J.,Bevan, D.R.,Esen, A.,Vasella, A.,Henrissat, B.,Czjze, M. Structural determinants of substrate specificity in family 1 beta-glucosidases: novel insights from the crystal structure of sorghum dhurrinase-1, a plant beta-glucosidase with strict specificity, in complex with its natural substrate. J.Biol.Chem. 2004 279 31796 31803 1V08 CRYSTAL STRUCTURE OF THE ZEA MAZE BETA-GLUCOSIDASE-1 IN COMPLEX WITH GLUCO-TETRAZOLE 2004-03-25 2004-05-20 Verdoucq, L.,Moriniere, J.,Bevan, D.R.,Esen, A.,Vasella, A.,Henrissat, B.,Czjze, M. Structural determinants of substrate specificity in family 1 beta-glucosidases: novel insights from the crystal structure of sorghum dhurrinase-1, a plant beta-glucosidase with strict specificity, in complex with its natural substrate. J.Biol.Chem. 2004 279 31796 31803 1PEU Ribonucleotide Reductase Protein R1E from Salmonella typhimurium 2003-05-22 2004-05-25 Uppsten, M.,Farnegardh, M.,Jordan, A.,Eliasson, R.,Eklund, H.,Uhlin, U. Structure of the large subunit of class Ib ribonucleotide reductase from Salmonella typhimurium and its complexes with allosteric effectors. J.Mol.Biol. 2003 330 87 97 1T3S Structural Analysis of the Voltage-Dependent Calcium Channel Beta Subunit Functional Core 2004-04-27 2004-05-25 Opatowsky, Y.,Chen, C.-C.,Campbell, K.P.,Hirsch, J.A. Structural Analysis of the Voltage-Dependent Calcium Channel Beta Subunit Functional Core and Its Complex with the Alpha1 Interaction Domain Neuron 2004 42 387 399 1RXI pI258 arsenate reductase (ArsC) triple mutant C10S/C15A/C82S 2003-12-18 2004-06-01 Messens, J.,Van Molle, I.,Vanhaesebrouck, P.,Van Belle, K.,Wahni, K.,Martins, J.C.,Wyns, L.,Loris, R. The structure of a triple mutant of pI258 arsenate reductase from Staphylococcus aureus and its 5-thio-2-nitrobenzoic acid adduct. Acta Crystallogr.,Sect.D 2004 60 1180 1184 1SJV Three-Dimensional Structure of a Llama VHH Domain Swapping 2004-03-04 2004-06-01 Spinelli, S.,Desmyter, A.,Frenken, L.,Verrips, T.,Tegoni, M.,Cambillau, C. Domain swapping of a llama VHH domain builds a crystal-wide beta-sheet structure. Febs Lett. 2004 564 35 40 1UX9 MAPPING PROTEIN MATRIX CAVITIES IN HUMAN CYTOGLOBIN THROUGH XE ATOM BINDING: A CRYSTALLOGRAPHIC INVESTIGATION 2004-02-23 2004-06-01 de Sanctis, D.,Dewilde, S.,Pesce, A.,Moens, L.,Ascenzi, P.,Hankeln, T.,Burmester, T.,Bolognesi, M. Mapping protein matrix cavities in human cytoglobin through Xe atom binding. Biochem.Biophys.Res.Commun. 2004 316 1217 1221 1OI6 STRUCTURE DETERMINATION OF THE TMP-COMPLEX OF EVAD 2003-06-09 2004-06-03 Merkel, A.B.,Major, L.L.,Errey, J.C.,Burkart, M.D.,Field, R.A.,Walsh, C.T.,Naismith, J.H. The position of a key tyrosine in dTDP-4-Keto-6-deoxy-D-glucose-5-epimerase (EvaD) alters the substrate profile for this RmlC-like enzyme. J.Biol.Chem. 2004 279 32684 32691 1V07 CRYSTAL STRUCTURE OF THRE11VAL MUTANT OF THE NERVE TISSUE MINI-HEMOGLOBIN FROM THE NEMERTEAN WORM CEREBRATULUS LACTEUS 2004-03-24 2004-06-03 Pesce, A.,Nardini, M.,Ascenzi, P.,Geuens, E.,Dewilde, S.,Moens, L.,Bolognesi, M.,Riggs, A.F.,Hale, A.,Deng, P.,Nienhaus, G.U.,Olson, J.S.,Nienhaus, K. Thr-E11 regulates O2 affinity in Cerebratulus lacteus mini-hemoglobin. J.Biol.Chem. 2004 279 33662 33672 1PJJ Complex between the Lactococcus lactis Fpg and an abasic site containing DNA. 2003-06-03 2004-06-08 Pereira de Jesus, K.,Serre, L.,Zelwer, C.,Castaing, B. Structural insights into abasic site for Fpg specific binding and catalysis: comparative high-resolution crystallographic studies of Fpg bound to various models of abasic site analogues-containing DNA. Nucleic Acids Res. 2005 33 5936 5944 1S9Q crystal structure of the ligand-binding domain of the estrogen-related receptor gamma in complex with 4-hydroxytamoxifen 2004-02-05 2004-06-08 Greschik, H.,Flaig, R.,Renaud, J.P.,Moras, D. Structural Basis for the Deactivation of the Estrogen-related Receptor {gamma} by Diethylstilbestrol or 4-Hydroxytamoxifen and Determinants of Selectivity. J.Biol.Chem. 2004 279 33639 33646 1VYW STRUCTURE OF CDK2/CYCLIN A WITH PNU-292137 2004-05-07 2004-06-10 Pevarello, P.,Brasca, M.G.,Amici, R.,Orsini, P.,Traquandi, G.,Corti, L.,Piutti, C.,Sansonna, P.,Villa, M.,Pierce, B.S.,Pulici, M.,Giordano, P.,Martina, K.,Fritzen, E.L.,Nugent, R.A.,Casale, E.,Cameron, A.,Ciomei, M.,Roletto, F.,Isacchi, A.,Fogliatto, G.,Pesenti, E.,Pastori, W.,Marsiglio, A.,Leach, K.L.,Clare, P.M.,Fiorentini, F.,Varasi, M.,Vulpetti, A.,Warpehoski, M.A. 3-Aminopyrazole inhibitors of CDK2/cyclin A as antitumor agents. 1. Lead finding. J.Med.Chem. 2004 47 3367 3380 1VZO THE STRUCTURE OF THE N-TERMINAL KINASE DOMAIN OF MSK1 REVEALS A NOVEL AUTOINHIBITORY CONFORMATION FOR A DUAL KINASE PROTEIN 2004-05-21 2004-06-11 Smith, K.J.,Carter, P.S.,Bridges, A.,Horrocks, P.,Lewis, C.,Pettman, G.,Clarke, A.,Brown, M.,Hughes, J.,Wilkinson, M.,Bax, B.,Reith, A. The structure of MSK1 reveals a novel autoinhibitory conformation for a dual kinase protein. Structure 2004 12 1067 1077 1T4O Crystal structure of rnt1p dsRBD 2004-04-30 2004-06-22 Leulliot, N.,Quevillon-Cheruel, S.,Graille, M.,Van Tilbeurgh, H.,Leeper, T.C.,Godin, K.S.,Edwards, T.E.,Sigurdsson, S.T.,Rozenkrants, N.,Nagel, R.J.,Ares, M.,Varani, G. A new alpha-helical extension promotes RNA binding by the dsRBD of Rnt1p RNAse III Embo J. 2004 23 2468 2477 1RZ6 Di-haem Cytochrome c Peroxidase, Form IN 2003-12-24 2004-06-29 Dias, J.M.,Alves, T.,Bonifacio, C.,Pereira, A.S.,Trincao, J.,Bourgeois, D.,Moura, I.,Romao, M.J. Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617. Structure 2004 12 961 973 1S61 Crystal Structure of "Truncated" Hemoglobin N (HbN) from Mycobacterium tuberculosis, Soaked with Butyl-isocyanide 2004-01-22 2004-06-29 Milani, M.,Pesce, A.,Ouellet, Y.,Dewilde, S.,Friedman, J.,Ascenzi, P.,Guertin, M.,Bolognesi, M. Heme-ligand tunneling in group I truncated hemoglobins J.Biol.Chem. 2004 279 21520 21525 1T1V Crystal Structure of the Glutaredoxin-like Protein SH3BGRL3 at 1.6 A resolution 2004-04-19 2004-06-29 Nardini, M.,Mazzocco, M.,Massaro, M.,Maffei, M.,Vergano, A.,Donadini, A.,Scartezzini, M.,Bolognesi, M. Crystal structure of the glutaredoxin-like protein SH3BGRL3 at 1.6 A resolution Biochem.Biophys.Res.Comm. 2004 318 470 476 1UXB ADENOVIRUS AD19P FIBRE HEAD IN COMPLEX WITH SIALYL-LACTOSE 2004-02-24 2004-07-01 Burmeister, W.P.,Guilligay, D.,Cusack, S.,Wadell, G.,Arnberg, N. Crystal structure of species D adenovirus fiber knobs and their sialic acid binding sites. J.Virol. 2004 78 7727 7736 1UYL STRUCTURE-ACTIVITY RELATIONSHIPS IN PURINE-BASED INHIBITOR BINDING TO HSP90 ISOFORMS 2004-03-02 2004-07-01 Wright, L.,Barril, X.,Dymock, B.,Sheridan, L.,Surgenor, A.,Beswick, M.,Drysdale, M.,Collier, A.,Massey, A.,Davies, N.,Fink, A.,Fromont, C.,Aherne, W.,Boxall, K.,Sharp, S.,Workman, P.,Hubbard, R.E. Structure-activity relationships in purine-based inhibitor binding to HSP90 isoforms. Chem.Biol. 2004 11 775 785 1W0K BERYLLIUM FLUORIDE INHIBITED BOVINE F1-ATPASE 2004-06-08 2004-07-08 Kagawa, R.,Montgomery, M.G.,Braig, K.,Leslie, A.G.,Walker, J.E. The structure of bovine F1-ATPase inhibited by ADP and beryllium fluoride. Embo J. 2004 23 2734 2744 1W0O VIBRIO CHOLERAE SIALIDASE 2004-06-09 2004-07-08 Moustafa, I.,Connaris, H.,Taylor, M.,Zaitsev, V.,Wilson, J.C.,Kiefel, M.J.,von Itzstein, M.,Taylor, G. Sialic acid recognition by Vibrio cholerae neuraminidase. J.Biol.Chem. 2004 279 40819 40826 1W0P VIBRIO CHOLERAE SIALIDASE WITH ALPHA-2,6-SIALYLLACTOSE 2004-06-09 2004-07-08 Moustafa, I.,Connaris, H.,Taylor, M.,Zaitsev, V.,Wilson, J.C.,Kiefel, M.J.,von Itzstein, M.,Taylor, G. Sialic acid recognition by Vibrio cholerae neuraminidase. J.Biol.Chem. 2004 279 40819 40826 1OJU 2.8 A RESOLUTION STRUCTURE OF MALATE DEHYDROGENASE FROM ARCHAEOGLOBUS FULGIDUS IN COMPLEX WITH ETHENO-NAD. 2003-07-15 2004-07-15 Irimia, A.,Vellieux, F.M.,Madern, D.,Zaccai, G.,Karshikoff, A.,Tibbelin, G.,Ladenstein, R.,Lien, T.,Birkeland, N.K. The 2.9A resolution crystal structure of malate dehydrogenase from Archaeoglobus fulgidus: mechanisms of oligomerisation and thermal stabilisation. J.Mol.Biol. 2004 335 343 356 1H9H COMPLEX OF EETI-II WITH PORCINE TRYPSIN 2001-03-12 2004-07-26 Kraetzner, R.,Wentzel, A.,Kolmar, H.,Uson, I. Complex of Eeti-II Mutant with Porcine Trypsin To be Published 0 0 0 0 1SZF A198G:L230A mutant flavocytochrome b2 with pyruvate bound 2004-04-05 2004-07-27 Mowat, C.G.,Wehenkel, A.,Green, A.J.,Walkinshaw, M.D.,Reid, G.A.,Chapman, S.K. Altered Substrate Specificity in Flavocytochrome b(2): Structural Insights into the Mechanism of l-Lactate Dehydrogenation Biochemistry 2004 43 9519 9526 1T3E Structural basis of dynamic glycine receptor clustering 2004-04-26 2004-07-27 Sola, M.,Bavro, V.N.,Timmins, J.,Franz, T.,Ricard-Blum, S.,Schoehn, G.,Ruigrok, R.W.H.,Paarmann, I.,Saiyed, T.,O'Sullivan, G.A.,Schmitt, B.,Betz, H.,Weissenhorn, W. Structural basis of dynamic glycine receptor clustering by gephyrin Embo J. 2004 23 2510 2519 1TFC CRYSTAL STRUCTURE OF THE LIGAND-BINDING DOMAIN OF THE ESTROGEN-RELATED RECEPTOR GAMMA IN COMPLEX WITH A STEROID RECEPTOR COACTIVATOR-1 PEPTIDE 2004-05-27 2004-07-27 Greschik, H.,Flaig, R.,Renaud, J.P.,Moras, D. Structural Basis for the Deactivation of the Estrogen-related Receptor {gamma} by Diethylstilbestrol or 4-Hydroxytamoxifen and Determinants of Selectivity. J.Biol.Chem. 2004 279 33639 33646 1U08 Crystal Structure and Reactivity of YbdL from Escherichia coli Identify a Methionine Aminotransferase Function. 2004-07-13 2004-07-27 Dolzan, M.,Johansson, K.,Roig-Zamboni, V.,Campanacci, V.,Tegoni, M.,Schneider, G.,Cambillau, C. Crystal structure and reactivity of YbdL from Escherichia coli identify a methionine aminotransferase function FEBS Lett. 2004 571 141 146 1UKC Crystal Structure of Aspergillus niger EstA 2003-08-19 2004-07-27 Bourne, Y.,Hasper, A.A.,Chahinian, H.,Juin, M.,De Graaff, L.H.,Marchot, P. Aspergillus niger protein EstA defines a new class of fungal esterases within the alpha/beta hydrolase fold superfamily of proteins STRUCTURE 2004 12 677 687 1V1H ADENOVIRUS FIBRE SHAFT SEQUENCE N-TERMINALLY FUSED TO THE BACTERIOPHAGE T4 FIBRITIN FOLDON TRIMERISATION MOTIF WITH A SHORT LINKER 2004-04-16 2004-07-30 Papanikolopoulou, K.,Teixeira, S.,Belrhali, H.,Forsyth, V.T.,Mitraki, A.,van Raaij, M.J. Adenovirus fibre shaft sequences fold into the native triple beta-spiral fold when N-terminally fused to the bacteriophage T4 fibritin foldon trimerisation motif. J.Mol.Biol. 2004 342 219 227 1W53 KINASE RECRUITMENT DOMAIN OF THE STRESS PHOSPHATASE RSBU 2004-08-05 2004-08-05 Delumeau, O.,Dutta, S.,Brigulla, M.,Kuhnke, G.,Hardwick, S.W.,Volker, U.,Yudkin, M.D.,Lewis, R.J. Functional and structural characterization of RsbU, a stress signaling protein phosphatase 2C. J.Biol.Chem. 2004 279 40927 40937 1PP3 Structure of thaumatin in a hexagonal space group 2003-06-16 2004-08-10 Charron, C.,Giege, R.,Lorber, B. Structure of thaumatin in a hexagonal space group: comparison of packing contacts in four crystal lattices. Acta Crystallogr.,Sect.D 2004 60 83 89 1VZI STRUCTURE OF SUPEROXIDE REDUCTASE BOUND TO FERROCYANIDE AND ACTIVE SITE EXPANSION UPON X-RAY INDUCED PHOTOREDUCTION 2004-05-19 2004-08-27 Adam, V.,Royant, A.,Niviere, V.,Molina-Heredia, F.P.,Bourgeois, D. Structure of superoxide reductase bound to ferrocyanide and active site expansion upon X-ray-induced photo-reduction. Structure 2004 12 1729 1740 1SHN Crystal structure of shrimp alkaline phosphatase with phosphate bound 2004-02-26 2004-08-31 de Backer, M.M.,McSweeney, S.,Lindley, P.F.,Hough, E. Ligand-binding and metal-exchange crystallographic studies on shrimp alkaline phosphatase. Acta Crystallogr.,Sect.D 2004 60 1555 1561 1T8K Crystal Structure of apo acyl carrier protein from E. coli 2004-05-13 2004-09-07 Qiu, X.,Janson, C.A. Structure of apo acyl carrier protein and a proposal to engineer protein crystallization through metal ions. Acta Crystallogr.,Sect.D 2004 60 1545 1554 1TDZ Crystal Structure Complex Between the Lactococcus Lactis FPG (Mutm) and a FAPY-dG Containing DNA 2004-05-24 2004-09-07 Coste, F.,Ober, M.,Carell, T.,Boiteux, S.,Zelwer, C.,Castaing, B. Structural basis for the recognition of the FapydG lesion (2,6-diamino-4-hydroxy-5-formamidopyrimidine) by formamidopyrimidine-DNA glycosylase J.Biol.Chem. 2004 279 44074 44083 1W3B THE SUPERHELICAL TPR DOMAIN OF O-LINKED GLCNAC TRANSFERASE REVEALS STRUCTURAL SIMILARITIES TO IMPORTIN ALPHA. 2004-07-14 2004-09-09 Jinek, M.,Rehwinkel, J.,Lazarus, B.D.,Izaurralde, E.,Hanover, J.A.,Conti, E. The superhelical TPR-repeat domain of O-linked GlcNAc transferase exhibits structural similarities to importin alpha. Nat.Struct.Mol.Biol. 2004 11 1001 1007 1W7A ATP BOUND MUTS 2004-08-13 2004-09-10 Lamers, M.H.,Georgijevic, D.,Lebbink, J.H.,Winterwerp, H.H.,Agianian, B.,de Wind, N.,Sixma, T.K. ATP increases the affinity between MutS ATPase domains. Implications for ATP hydrolysis and conformational changes. J.Biol.Chem. 2004 279 43879 43885 1U1J A. thaliana cobalamine independent methionine synthase 2004-07-15 2004-09-14 Ferrer, J.-L.,Ravanel, S.,Robert, M.,Dumas, R. Crystal structures of cobalamin-independent methionine synthase complexed with zinc, homocysteine, and methyltetrahydrofolate J.Biol.Chem. 2004 279 44235 44238 1UNR CRYSTAL STRUCTURE OF THE PH DOMAIN OF PKB ALPHA IN COMPLEX WITH A SULFATE MOLECULE 2003-09-15 2004-09-16 Milburn, C.C.,Deak, M.,Kelly, S.M.,Price, N.C.,Alessi, D.R.,Van Aalten, D.M. Binding of phosphatidylinositol 3,4,5-trisphosphate to the pleckstrin homology domain of protein kinase B induces a conformational change. Biochem.J. 2003 375 531 538 1UU5 X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMICOLA GRISEA CEL12A SOAKED WITH CELLOTETRAOSE 2003-12-15 2004-09-16 Sandgren, M.,Berglund, G.I.,Shaw, A.,Stahlberg, J.,Kenne, L.,Desmet, T.,Mitchinson, C. Crystal complex structures reveal how substrate is bound in the -4 to the +2 binding sites of Humicola grisea Cel12A. J.Mol.Biol. 2004 342 1505 1517 1VZ7 ORNITHINE ACETYLTRANSFERASE (ORF6 GENE PRODUCT- CLAVULANIC ACID BIOSYNTHESIS) FROM STREPTOMYCES CLAVULIGERUS 2004-05-14 2004-09-16 Elkins, J.M.,Kershaw, N.J.,Schofield, C.J. X-ray crystal structure of ornithine acetyltransferase from the clavulanic acid biosynthesis gene cluster. Biochem.J. 2005 385 565 573 1W2U X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMICOLA GRISEA CEL12A IN COMPLEX WITH A SOAKED THIO CELLOTETRAOSE 2004-07-08 2004-09-16 Sandgren, M.,Berglund, G.I.,Shaw, A.,Stahlberg, J.,Kenne, L.,Desmet, T.,Mitchinson, C. Crystal complex structures reveal how substrate is bound in the -4 to the +2 binding sites of Humicola grisea Cel12A. J.Mol.Biol. 2004 342 1505 1517 1R6A Structure of the dengue virus 2'O methyltransferase in complex with s-adenosyl homocysteine and ribavirin 5' triphosphate 2003-10-15 2004-09-21 Benarroch, D.,Egloff, M.P.,Mulard, L.,Guerreiro, C.,Romette, J.L.,Canard, B. A structural basis for the inhibition of the NS5 dengue virus mRNA 2'-O-methyltransferase domain by ribavirin 5'-triphosphate. J.Biol.Chem. 2004 279 35638 35643 1TQ6 Crystal Structure of IIGP1: a paradigm for interferon inducible p47 resistance GTPases 2004-06-16 2004-09-21 Ghosh, A.,Uthaiah, R.,Howard, J.,Herrmann, C.,Wolf, E. 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J.Mol.Biol. 2004 343 157 171 1W3H THE 3-DIMENSIONAL STRUCTURE OF A THERMOSTABLE MUTANT OF A XYLANASE (XYN10A) FROM CELLVIBRIO JAPONICUS 2004-07-15 2004-09-30 Andrews, S.R.,Taylor, E.J.,Pell, G.,Vincent, F.,Ducros, V.M.,Davies, G.J.,Lakey, J.H.,Gilbert, H.J. The use of forced protein evolution to investigate and improve stability of family 10 xylanases. The production of Ca2+-independent stable xylanases. J.Biol.Chem. 2004 279 54369 54379 1W55 STRUCTURE OF THE BIFUNCTIONAL ISPDF FROM CAMPYLOBACTER JEJUNI 2004-08-04 2004-10-04 Gabrielsen, M.,Bond, C.S.,Hallyburton, I.,Hecht, S.,Bacher, A.,Eisenreich, W.,Rohdich, F.,Hunter, W.N. Hexameric assembly of the bifunctional methylerythritol 2,4-cyclodiphosphate synthase and protein-protein associations in the deoxy-xylulose-dependent pathway of isoprenoid precursor biosynthesis. 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Acta Crystallogr.,Sect.D 2004 60 1824 1832 1WNB Escherichia coli YdcW gene product is a medium-chain aldehyde dehydrogenase (complexed with nadh and betaine aldehyde) 2004-07-29 2004-10-05 Gruez, A.,Roig-Zamboni, V.,Grisel, S.,Salomoni, A.,Valencia, C.,Campanacci, V.,Tegoni, M.,Cambillau, C. Crystal Structure and Kinetics Identify Escherichia coli YdcW Gene Product as a Medium-chain Aldehyde Dehydrogenase J.Mol.Biol. 2004 343 29 41 1WND Escherichia coli YdcW gene product is a medium-chain aldehyde dehydrogenase as determined by kinetics and crystal stucture 2004-07-29 2004-10-05 Gruez, A.,Roig-Zamboni, V.,Grisel, S.,Salomoni, A.,Valencia, C.,Campanacci, V.,Tegoni, M.,Cambillau, C. Crystal Structure and Kinetics Identify Escherichia coli YdcW Gene Product as a Medium-chain Aldehyde Dehydrogenase J.Mol.Biol. 2004 343 29 41 1XFO Crystal Structure of an archaeal aminopeptidase 2004-09-15 2004-10-05 Russo, S.,Baumann, U. Crystal structure of a dodecameric tetrahedral shaped aminopeptidase J.Biol.Chem. 2004 279 51275 51281 1UPQ CRYSTAL STRUCTURE OF THE PLECKSTRIN HOMOLOGY (PH) DOMAIN OF PEPP1 2003-10-09 2004-10-07 Milburn, C.C.,Komander, D.,Deak, M.,Alessi, D.R.,Van Aalten, D.M.F. Crystal Structure of the Pleckstrin Homology Domain of Pepp1 To be Published 0 0 0 0 1U0U An Aldol Switch Discovered in Stilbene Synthases Mediates Cyclization Specificity of Type III Polyketide Synthases: Pine stilbene synthase structure 2004-07-14 2004-10-12 Austin, M.B.,Bowman, M.E.,Ferrer, J.-L.,Schroder, J.,Noel, J.P. An Aldol Switch Discovered in Stilbene Synthases Mediates Cyclization Specificity of Type III Polyketide Synthases Chem.Biol. 2004 11 1179 1194 1W3P NIMA FROM D. RADIODURANS WITH A HIS71-PYRUVATE RESIDUE 2004-07-17 2004-10-18 Leiros, H.K.,Kozielski-Stuhrmann, S.,Kapp, U.,Terradot, L.,Leonard, G.A.,McSweeney, S.M. 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Atomic snapshots of an RNA packaging motor reveal conformational changes linking ATP hydrolysis to RNA translocation. Cell 2004 118 743 755 1Q31 Crystal Structure of the Tobacco Etch Virus Protease C151A mutant 2003-07-28 2004-11-02 Nunn, C.M.,Jeeves, M.,Cliff, M.J.,Urquhart, G.T.,George, R.R.,Chao, L.H.,Tscuchia, Y.,Djordjevic, S. Crystal structure of tobacco etch virus protease shows the protein C terminus bound within the active site. J.Mol.Biol. 2005 350 145 155 1U8G Crystal structure of a HIV-1 Protease in complex with peptidomimetic inhibitor KI2-PHE-GLU-GLU-NH2 2004-08-06 2004-11-02 Brynda, J.,Rezacova, P.,Fabry, M.,Horejsi, M.,Stouracova, R.,Soucek, M.,Hradilek, M.,Konvalinka, J.,Sedlacek, J. Inhibitor binding at the protein interface in crystals of a HIV-1 protease complex. 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