PDB_ID STRUCTURE TITLE DEPOSITION DATE RELEASE DATE AUTHORS TITLE JOURNAL YEAR VOLUME FIRST PAGE LAST PAGE 1MT1 The Crystal Structure of Pyruvoyl-dependent Arginine Decarboxylase from Methanococcus jannaschii 2002-09-20 2003-03-25 Tolbert, W.D.,Graham, D.E.,White, R.H.,Ealick, S.E. Pyruvoyl-Dependent Arginine Decarboxylase from Methanococcus jannaschii: Crystal Structures of the Self-Cleaved and S53A Proenzyme Forms Structure 2003 11 285 294 1N13 The Crystal Structure of Pyruvoyl-dependent Arginine Decarboxylase from Methanococcus jannashii 2002-10-16 2003-03-25 Tolbert, W.D.,Graham, D.E.,White, R.H.,Ealick, S.E. Pyruvoyl-Dependent Arginine Decarboxylase from Methanococcus jannaschii: Crystal Structures of the Self-Cleaved and S53A Proenzyme Forms Structure 2003 11 285 294 1NG3 Complex of ThiO (glycine oxidase) with acetyl-glycine 2002-12-16 2003-04-08 Settembre, E.C.,Dorrestein, P.C.,Park, J.,Augustine, A.,Begley, T.P.,Ealick, S.E. Structural and Mechanistic Studies on ThiO, a Glycine Oxidase Essential for Thiamin Biosynthesis in Bacillus subtilis Biochemistry 2003 42 2971 2981 1NG4 Structure of ThiO (glycine oxidase) from Bacillus subtilis 2002-12-16 2003-04-08 Settembre, E.C.,Dorrestein, P.C.,Park, J.,Augustine, A.,Begley, T.P.,Ealick, S.E. Structural and Mechanistic Studies on ThiO, a Glycine Oxidase Essential for Thiamin Biosynthesis in Bacillus subtilis Biochemistry 2003 42 2971 2981 1P8T Crystal structure of Nogo-66 Receptor 2003-05-07 2003-05-20 Barton, W.A.,Liu, B.P.,Tzvetkova, D.,Jeffrey, P.D.,Fournier, A.E.,Sah, D.,Cate, R.,Strittmatter, S.M.,Nikolov, D.B. Structure and axon outgrowth inhibitor binding of the Nogo-66 receptor and related proteins Embo J. 2003 22 3291 3302 1P9O Crystal Structure of Phosphopantothenoylcysteine Synthetase 2003-05-12 2003-09-02 Manoj, N.,Strauss, E.,Begley, T.P.,Ealick, S.E. Structure of human phosphopantothenoylcysteine synthetase at 2.3 A resolution. Structure 2003 11 927 936 1Q5V Apo-NikR 2003-08-11 2003-09-30 Schreiter, E.R.,Sintchak, M.D.,Guo, Y.,Chivers, P.T.,Sauer, R.T.,Drennan, C.L. Crystal Structure of the Nickel-Responsive Transcription Factor NikR Nat.Struct.Biol. 2003 10 794 799 1QVF Structure of a deacylated tRNA minihelix bound to the E site of the large ribosomal subunit of Haloarcula marismortui 2003-08-27 2003-11-11 Schmeing, T.M.,Moore, P.B.,Steitz, T.A. Structures of deacylated tRNA mimics bound to the E site of the large ribosomal subunit RNA 2003 9 1345 1352 1RH5 The structure of a protein conducting channel 2003-11-13 2004-01-06 van den Berg, B.,Clemons Jr., W.M.,Collinson, I.,Modis, Y.,Hartmann, E.,Harrison, S.C.,Rapoport, T.A. X-ray structure of a protein-conducting channel Nature 2004 427 36 44 1R9G Three-dimensional Structure of YaaE from Bacillus subtilis 2003-10-29 2004-01-27 Bauer, J.A.,Bennett, E.M.,Begley, T.P.,Ealick, S.E. Three-dimensional Structure of YaaE from Bacillus subtilis, a Glutaminase Implicated in Pyridoxal-5'-phosphate Biosynthesis. J.Biol.Chem. 2004 279 2704 2711 1UX4 CRYSTAL STRUCTURES OF A FORMIN HOMOLOGY-2 DOMAIN REVEAL A TETHERED-DIMER ARCHITECTURE 2004-02-19 2004-03-11 Xu, Y.,Moseley, J.B.,Sagot, I.,Poy, F.,Pellman, D.,Goode, B.L.,Eck, M.J. Crystal structures of a Formin Homology-2 domain reveal a tethered dimer architecture. Cell 2004 116 711 723 1QZU crystal structure of human phosphopantothenoylcysteine decarboxylase 2003-09-17 2004-03-23 Manoj, N.,Ealick, S.E. Unusual space-group pseudosymmetry in crystals of human phosphopantothenoylcysteine decarboxylase. Acta Crystallogr.,Sect.D 2003 59 1762 1766 1S2D Purine 2'-Deoxyribosyl complex with arabinoside: Ribosylated Intermediate (AraA) 2004-01-08 2004-03-30 Anand, R.,Kaminski, P.A.,Ealick, S.E. Structures of purine 2'-deoxyribosyltransferase, substrate complexes, and the ribosylated enzyme intermediate at 2.0 A resolution. Biochemistry 2004 43 2384 2393 1S2G Purine 2'deoxyribosyltransferase + 2'-deoxyadenosine 2004-01-08 2004-03-30 Anand, R.,Kaminski, P.A.,Ealick, S.E. Structures of purine 2'-deoxyribosyltransferase, substrate complexes, and the ribosylated enzyme intermediate at 2.0 A resolution. Biochemistry 2004 43 2384 2393 1S2I Purine 2'deoxyribosyltransferase + bromopurine 2004-01-08 2004-03-30 Anand, R.,Kaminski, P.A.,Ealick, S.E. Structures of purine 2'-deoxyribosyltransferase, substrate complexes, and the ribosylated enzyme intermediate at 2.0 A resolution. Biochemistry 2004 43 2384 2393 1S2L Purine 2'deoxyribosyltransferase native structure 2004-01-08 2004-03-30 Anand, R.,Kaminski, P.A.,Ealick, S.E. Structures of purine 2'-deoxyribosyltransferase, substrate complexes, and the ribosylated enzyme intermediate at 2.0 A resolution. Biochemistry 2004 43 2384 2393 1S3F Purine 2'-deoxyribosyltransferase + selenoinosine 2004-01-13 2004-03-30 Anand, R.,Kaminski, P.A.,Ealick, S.E. Structures of purine 2'-deoxyribosyltransferase, substrate complexes, and the ribosylated enzyme intermediate at 2.0 A resolution. Biochemistry 2004 43 2384 2393 1VKH Crystal structure of putative serine hydrolase (ydr428c) from Saccharomyces cerevisiae at 1.85 A resolution 2004-05-20 2004-06-08 Arndt, J.W.,Schwarzenbacher, R.,Page, R.,Abdubek, P.,Ambing, E.,Biorac, T.,Canaves, J.M.,Chiu, H.J.,Dai, X.,Deacon, A.M.,DiDonato, M.,Elsliger, M.A.,Godzik, A.,Grittini, C.,Grzechnik, S.K.,Hale, J.,Hampton, E.,Han, G.W.,Haugen, J.,Hornsby, M.,Klock, H.E.,Koesema, E.,Kreusch, A.,Kuhn, P.,Jaroszewski, L.,Lesley, S.A.,Levin, I.,McMullan, D.,McPhillips, T.M.,Miller, M.D.,Morse, A.,Moy, K.,Nigoghossian, E.,Ouyang, J.,Peti, W.S.,Quijano, K.,Reyes, R.,Sims, E.,Spraggon, G.,Stevens, R.C.,van den Bedem, H.,Velasquez, J.,Vincent, J.,von Delft, F.,Wang, X.,West, B.,White, A.,Wolf, G.,Xu, Q.,Zagnitko, O.,Hodgson, K.O.,Wooley, J.,Wilson, I.A. Crystal structure of an alpha/beta serine hydrolase (YDR428C) from Saccharomyces cerevisiae at 1.85 A resolution Proteins 2005 58 755 758 1T16 Crystal structure of the bacterial fatty acid transporter FadL from Escherichia coli 2004-04-15 2004-06-15 van den Berg, B.,Black, P.N.,Clemons Jr., W.M.,Rapoport, T.A. Crystal structure of the long-chain fatty acid transporter FadL. Science 2004 304 1506 1509 1T1L Crystal structure of the long-chain fatty acid transporter FadL 2004-04-16 2004-06-15 van den Berg, B.,Black, P.N.,Clemons Jr., W.M.,Rapoport, T.A. Crystal structure of the long-chain fatty acid transporter FadL. Science 2004 304 1506 1509 1TLU Crystal Structure of Thermotoga maritima S-adenosylmethionine decarboxylase 2004-06-09 2004-06-29 Toms, A.V.,Kinsland, C.,McCloskey, D.E.,Pegg, A.E.,Ealick, S.E. Evolutionary Links as Revealed by the Structure of Thermotoga maritima S-Adenosylmethionine Decarboxylase. J.Biol.Chem. 2004 279 33837 33846 1TMI Structure of Thermotoga maritima S63A non-processing mutant S-adenosylmethionine decarboxylase 2004-06-10 2004-06-29 Toms, A.V.,Kinsland, C.,McCloskey, D.E.,Pegg, A.E.,Ealick, S.E. Evolutionary Links as Revealed by the Structure of Thermotoga maritima S-Adenosylmethionine Decarboxylase. J.Biol.Chem. 2004 279 33837 33846 1TVL Structure of YTNJ from Bacillus subtilis 2004-06-29 2004-07-13 Gorman, J.,Shapiro, L. Structure of YTNJ from Bacillus subtilis To be Published 0 0 0 0 1Q47 Structure of the Semaphorin 3A Receptor-Binding Module 2003-08-01 2004-08-03 Antipenko, A.,Himanen, J.P.,van Leyen, K.,Nardi-Dei, V.,Lesniak, J.,Barton, W.A.,Rajashankar, K.R.,Lu, M.,Hoemme, C.,Puschel, A.W.,Nikolov, D.B. Structure of the semaphorin-3A receptor binding module. Neuron 2003 39 589 598 1T8R Crystal Structure of E. coli AMP Nucleosidase 2004-05-13 2004-08-17 Zhang, Y.,Cottet, S.E.,Ealick, S.E. Structure of Escherichia coli AMP Nucleosidase Reveals Similarity to Nucleoside Phosphorylases STRUCTURE 2004 12 1383 1394 1T8S Crystal Structure of E.coli AMP Nucleosidase complexed with formicin 5'-monophosphate 2004-05-13 2004-08-17 Zhang, Y.,Cottet, S.E.,Ealick, S.E. Structure of Escherichia coli AMP Nucleosidase Reveals Similarity to Nucleoside Phosphorylases STRUCTURE 2004 12 1383 1394 1T8W Crystal Structure of E. coli AMP Nucleosidase 2004-05-13 2004-08-17 Zhang, Y.,Cottet, S.E.,Ealick, S.E. Structure of Escherichia coli AMP Nucleosidase Reveals Similarity to Nucleoside Phosphorylases STRUCTURE 2004 12 1383 1394 1T8Y Crystal Structure of E.coli AMP Nucleosidase complexed with phosphate 2004-05-13 2004-08-17 Zhang, Y.,Cottet, S.E.,Ealick, S.E. Structure of Escherichia coli AMP Nucleosidase Reveals Similarity to Nucleoside Phosphorylases STRUCTURE 2004 12 1383 1394 1T4A Structure of B. Subtilis PurS C2 Crystal Form 2004-04-28 2004-09-14 Anand, R.,Hoskins, A.A.,Bennett, E.M.,Sintchak, M.D.,Stubbe, J.,Ealick, S.E. A model for the Bacillus subtilis formylglycinamide ribonucleotide amidotransferase multiprotein complex. Biochemistry 2004 43 10343 10352 1TYG Structure of the thiazole synthase/ThiS complex 2004-07-07 2004-09-28 Settembre, E.C.,Dorrestein, P.C.,Zhai, H.,Chatterjee, A.,McLafferty, F.W.,Begley, T.P.,Ealick, S.E. Thiamin Biosynthesis in Bacillus subtilis: Structure of the Thiazole Synthase/Sulfur Carrier Protein Complex Biochemistry 2004 43 11647 11657 1TYY Crystal structure of aminoimidazole riboside kinase from Salmonella enterica 2004-07-08 2004-10-07 Zhang, Y.,Dougherty, M.,Downs, D.M.,Ealick, S.E. Crystal Structure of an Aminoimidazole Riboside Kinase from Salmonella enterica; Implications for the Evolution of the Ribokinase Superfamily STRUCTURE 2004 12 1809 1821 1TZ3 crystal structure of aminoimidazole riboside kinase complexed with aminoimidazole riboside 2004-07-09 2004-10-12 Zhang, Y.,Dougherty, M.,Downs, D.M.,Ealick, S.E. Crystal Structure of an Aminoimidazole Riboside Kinase from Salmonella enterica; Implications for the Evolution of the Ribokinase Superfamily STRUCTURE 2004 12 1809 1821 1XRS Crystal structure of Lysine 5,6-Aminomutase in complex with PLP, cobalamin, and 5'-deoxyadenosine 2004-10-15 2004-11-09 Berkovitch, F.,Behshad, E.,Tang, K.H.,Enns, E.A.,Frey, P.A.,Drennan, C.L. A locking mechanism preventing radical damage in the absence of substrate, as revealed by the x-ray structure of lysine 5,6-aminomutase. Proc.Natl.Acad.Sci.Usa 2004 101 15870 15875 1TWB SspB disulfide crosslinked to an ssrA degradation tag 2004-06-30 2004-11-16 Bolon, D.N.,Grant, R.A.,Baker, T.A.,Sauer, R.T. Nucleotide-Dependent Substrate Handoff from the SspB Adaptor to the AAA+ ClpXP Protease. Mol.Cell 2004 16 343 350 1XD3 Crystal structure of UCHL3-UbVME complex 2004-09-03 2004-11-23 Misaghi, S.,Galardy, P.J.,Meester, W.J.N.,Ovaa, H.,Ploegh, H.L.,Gaudet, R. Structure of the Ubiquitin Hydrolase UCH-L3 Complexed with a Suicide Substrate J.Biol.Chem. 2005 280 1512 1520 1R3D Crystal structure of protein VC1974 from Vibrio cholerae, Pfam abhydrolase 2003-10-01 2004-11-30 Gorman, J.,Shapiro, L. Structural Genomics target NYSGRC-T920 related to A/B hydrolase fold. To be Published 0 0 0 0 1Y0Q Crystal structure of an active group I ribozyme-product complex 2004-11-16 2004-12-21 Golden, B.L.,Kim, H.,Chase, E. Crystal structure of a phage Twort group I ribozyme-product complex Nat.Struct.Mol.Biol. 2005 12 82 89 1U9P Permuted single-chain Arc 2004-08-10 2005-02-15 Tabtiang, R.K.,Cezairliyan, B.O.,Grant, R.A.,Cochrane, J.C.,Sauer, R.T. Consolidating critical binding determinants by noncyclic rearrangement of protein secondary structure Proc.Natl.Acad.Sci.Usa 2005 102 2305 2309 1YAD Structure of TenI from Bacillus subtilis 2004-12-17 2005-02-22 Toms, A.V.,Haas, A.L.,Park, J.H.,Begley, T.P.,Ealick, S.E. Structural characterization of the regulatory proteins TenA and TenI from Bacillus subtilis and identification of TenA as a thiaminase II. Biochemistry 2005 44 2319 2329 1YAF Structure of TenA from Bacillus subtilis 2004-12-17 2005-02-22 Toms, A.V.,Haas, A.L.,Park, J.H.,Begley, T.P.,Ealick, S.E. Structural characterization of the regulatory proteins TenA and TenI from Bacillus subtilis and identification of TenA as a thiaminase II. Biochemistry 2005 44 2319 2329 1YWT Crystal structure of the human sigma isoform of 14-3-3 in complex with a mode-1 phosphopeptide 2005-02-18 2005-03-01 Wilker, E.W.,Grant, R.A.,Artim, S.C.,Yaffe, M.B. A structural basis for 14-3-3sigma functional specificity. J.Biol.Chem. 2005 280 18891 18898 1Z33 Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase 2005-03-10 2005-03-29 Zang, Y.,Wang, W.H.,Wu, S.W.,Ealick, S.E.,Wang, C.C. Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex. J.Biol.Chem. 2005 280 22318 22325 1Z34 Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with 2-fluoro-2'-deoxyadenosine 2005-03-10 2005-03-29 Zang, Y.,Wang, W.H.,Wu, S.W.,Ealick, S.E.,Wang, C.C. Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex. J.Biol.Chem. 2005 280 22318 22325 1Z35 Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with 2-fluoroadenosine 2005-03-10 2005-03-29 Zang, Y.,Wang, W.H.,Wu, S.W.,Ealick, S.E.,Wang, C.C. Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex. J.Biol.Chem. 2005 280 22318 22325 1Z36 Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with formycin A 2005-03-10 2005-03-29 Zang, Y.,Wang, W.H.,Wu, S.W.,Ealick, S.E.,Wang, C.C. Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex. J.Biol.Chem. 2005 280 22318 22325 1Z38 Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with inosine 2005-03-10 2005-03-29 Zang, Y.,Wang, W.H.,Wu, S.W.,Ealick, S.E.,Wang, C.C. Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex. J.Biol.Chem. 2005 280 22318 22325 1YFN Versatile modes of peptide recognition by the AAA+ adaptor protein SspB- the crystal structure of a SspB-RseA complex 2005-01-03 2005-05-17 Levchenko, I.,Grant, R.A.,Flynn, J.M.,Sauer, R.T.,Baker, T.A. Versatile modes of peptide recognition by the AAA+ adaptor protein SspB Nat.Struct.Mol.Biol. 2005 12 520 525 1YFU Crystal structure of 3-hydroxyanthranilate-3,4-dioxygenase from Ralstonia metallidurans 2005-01-04 2005-05-31 Zhang, Y.,Colabroy, K.L.,Begley, T.P.,Ealick, S.E. Structural Studies on 3-Hydroxyanthranilate-3,4-dioxygenase: The Catalytic Mechanism of a Complex Oxidation Involved in NAD Biosynthesis. Biochemistry 2005 44 7632 7643 1YFW Crystal structure of 3-hydroxyanthranilate-3,4-dioxygenase from Ralstonia metallidurans complexed with 4-chloro-3-hydroxyanthranilic acid and O2 2005-01-04 2005-05-31 Zhang, Y.,Colabroy, K.L.,Begley, T.P.,Ealick, S.E. Structural Studies on 3-Hydroxyanthranilate-3,4-dioxygenase: The Catalytic Mechanism of a Complex Oxidation Involved in NAD Biosynthesis. Biochemistry 2005 44 7632 7643 1YFX Crystal structure of 3-hydroxyanthranilate-3,4-dioxygenase from Ralstonia metallidurans complexed with 4-chloro-3-hydroxyanthranilic acid and NO 2005-01-04 2005-05-31 Zhang, Y.,Colabroy, K.L.,Begley, T.P.,Ealick, S.E. Structural Studies on 3-Hydroxyanthranilate-3,4-dioxygenase: The Catalytic Mechanism of a Complex Oxidation Involved in NAD Biosynthesis. Biochemistry 2005 44 7632 7643 1U1C Structure of E. coli uridine phosphorylase complexed to 5-benzylacyclouridine (BAU) 2004-07-15 2005-07-05 Bu, W.,Settembre, E.C.,el Kouni, M.H.,Ealick, S.E. Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines. Acta Crystallogr.,Sect.D 2005 61 863 872 1U1D Structure of e. coli uridine phosphorylase complexed to 5-(phenylthio)acyclouridine (ptau) 2004-07-15 2005-07-05 Bu, W.,Settembre, E.C.,el Kouni, M.H.,Ealick, S.E. Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines. Acta Crystallogr.,Sect.D 2005 61 863 872 1U1E Structure of e. coli uridine phosphorylase complexed to 5(phenylseleno)acyclouridine (PSAU) 2004-07-15 2005-07-05 Bu, W.,Settembre, E.C.,el Kouni, M.H.,Ealick, S.E. Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines. Acta Crystallogr.,Sect.D 2005 61 863 872 1U1G Structure of E. coli uridine phosphorylase complexed to 5-(m-(benzyloxy)benzyl)barbituric acid (BBBA) 2004-07-15 2005-07-05 Bu, W.,Settembre, E.C.,el Kouni, M.H.,Ealick, S.E. Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines. Acta Crystallogr.,Sect.D 2005 61 863 872 1U5D Crystal Structure of the PH domain of SKAP55 2004-07-27 2005-07-26 Tang, Y.,Swanson, K.D.,Neel, B.G.,Eck, M.J. Structural Basis for the Dimerization and Phosphoinositide Specificity of the Src Kinase-associated Phosphoproteins SKAP55 and SKAP-Hom To be Published 0 0 0 0 1ZZ6 Crystal Structure of Apo-HppE 2005-06-13 2005-07-26 Higgins, L.J.,Yan, F.,Liu, P.,Liu, H.W.,Drennan, C.L. Structural insight into antibiotic fosfomycin biosynthesis by a mononuclear iron enzyme Nature 2005 437 838 844 1ZZ7 Crystal Structure of FeII HppE in Complex with Substrate form 1 2005-06-13 2005-07-26 Higgins, L.J.,Yan, F.,Liu, P.,Liu, H.W.,Drennan, C.L. Structural insight into antibiotic fosfomycin biosynthesis by a mononuclear iron enzyme Nature 2005 437 838 844 1ZZC Crystal Structure of CoII HppE in Complex with Tris Buffer 2005-06-13 2005-07-26 Higgins, L.J.,Yan, F.,Liu, P.,Liu, H.W.,Drennan, C.L. Structural insight into antibiotic fosfomycin biosynthesis by a mononuclear iron enzyme Nature 2005 437 838 844 1ZZB Crystal Structure of CoII HppE in Complex with Substrate 2005-06-13 2005-07-26 Higgins, L.J.,Yan, F.,Liu, P.,Liu, H.W.,Drennan, C.L. Structural insight into antibiotic fosfomycin biosynthesis by a mononuclear iron enzyme Nature 2005 437 838 844 1ZZ9 Crystal Structure of FeII HppE 2005-06-13 2005-07-26 Higgins, L.J.,Yan, F.,Liu, P.,Liu, H.W.,Drennan, C.L. Structural insight into antibiotic fosfomycin biosynthesis by a mononuclear iron enzyme Nature 2005 437 838 844 1ZSZ Crystal structure of a computationally designed SspB heterodimer 2005-05-25 2005-08-23 Bolon, D.N.,Grant, R.A.,Baker, T.A.,Sauer, R.T. Specificity versus stability in computational protein design. Proc.Natl.Acad.Sci.Usa 2005 102 12724 12729 2B1E The structures of exocyst subunit Exo70p and the Exo84p C-terminal domains reveal a common motif 2005-09-15 2005-11-01 Dong, G.,Hutagalung, A.H.,Fu, C.,Novick, P.,Reinisch, K.M. The structures of exocyst subunit Exo70p and the Exo84p C-terminal domains reveal a common motif Nat.Struct.Mol.Biol. 2005 12 1094 1100 2ABS Crystal structure of T. gondii adenosine kinase complexed with AMP-PCP 2005-07-16 2006-01-24 Zhang, Y.,El Kouni, M.H.,Ealick, S.E. Structure of Toxoplasma gondii adenosine kinase in complex with an ATP analog at 1.1 angstroms resolution. Acta Crystallogr.,Sect.D 2006 62 140 145 2EY4 Crystal Structure of a Cbf5-Nop10-Gar1 Complex 2005-11-09 2006-01-24 Rashid, R.,Liang, B.,Baker, D.L.,Youssef, O.A.,He, Y.,Phipps, K.,Terns, R.M.,Terns, M.P.,Li, H. Crystal structure of a Cbf5-Nop10-Gar1 complex and implications in RNA-guided pseudouridylation and dyskeratosis congenita. Mol.Cell 2006 21 249 260 1YMN The study of reductive unfolding pathways of RNase A (Y92L mutant) 2005-01-21 2006-01-31 Xu, G.,Narayan, M.,Kurinov, I.,Ripoll, D.R.,Welker, E.,Khalili, M.,Ealick, S.E.,Scheraga, H.A. A localized specific interaction alters the unfolding pathways of structural homologues. J.Am.Chem.Soc. 2006 128 1204 1213 1YMR The study of reductive unfolding pathways of RNase A (Y92A mutant) 2005-01-21 2006-01-31 Xu, G.,Narayan, M.,Kurinov, I.,Ripoll, D.R.,Welker, E.,Khalili, M.,Ealick, S.E.,Scheraga, H.A. A localized specific interaction alters the unfolding pathways of structural homologues. J.Am.Chem.Soc. 2006 128 1204 1213 1YMW The study of reductive unfolding pathways of RNase A (Y92G mutant) 2005-01-21 2006-01-31 Xu, G.,Narayan, M.,Kurinov, I.,Ripoll, D.R.,Welker, E.,Khalili, M.,Ealick, S.E.,Scheraga, H.A. A localized specific interaction alters the unfolding pathways of structural homologues. J.Am.Chem.Soc. 2006 128 1204 1213 1ZUD Structure of ThiS-ThiF protein complex 2005-05-30 2006-01-31 Lehmann, C.,Begley, T.P.,Ealick, S.E. Structure of the Escherichia coli ThiS-ThiF Complex, a Key Component of the Sulfur Transfer System in Thiamin Biosynthesis. Biochemistry 2006 45 11 19 2FZV Crystal Structure of an apo form of a Flavin-binding Protein from Shigella flexneri 2006-02-10 2006-02-21 Vorontsov, I.I.,Minasov, G.,Brunzelle, J.S.,Shuvalova, L.,Kiryukhina, O.,Collart, F.R.,Anderson, W.F. Crystal structure of an apo form of Shigella flexneri ArsH protein with an NADPH-dependent FMN reductase activity Protein Sci. 2007 16 2483 2490 2F5Q Catalytically inactive (E3Q) MutM crosslinked to oxoG:C containing DNA CC2 2005-11-26 2006-03-07 Banerjee, A.,Santos, W.L.,Verdine, G.L. Structure of a DNA glycosylase searching for lesions. Science 2006 311 1153 1157 2A8Y Crystal structure of 5'-deoxy-5'methylthioadenosine phosphorylase complexed with 5'-deoxy-5'methylthioadenosine and sulfate 2005-07-10 2006-03-28 Zhang, Y.,Porcelli, M.,Cacciapuoti, G.,Ealick, S.E. The crystal structure of 5'-deoxy-5'-methylthioadenosine phosphorylase II from Sulfolobus solfataricus, a thermophilic enzyme stabilized by intramolecular disulfide bonds. J.Mol.Biol. 2006 357 252 262 2G09 X-ray structure of mouse pyrimidine 5'-nucleotidase type 1, product complex 2006-02-11 2006-04-04 Bitto, E.,Bingman, C.A.,Wesenberg, G.E.,McCoy, J.G.,Phillips, G.N. Structure of pyrimidine 5'-nucleotidase type 1. Insight into mechanism of action and inhibition during lead poisoning. J.Biol.Chem. 2006 281 20521 20529 2ETC Crystal structure of the ankyrin repeat domain of TRPV2 2005-10-27 2006-06-27 Jin, X.,Touhey, J.,Gaudet, R. Structure of the N-terminal Ankyrin Repeat Domain of the TRPV2 Ion Channel. J.Biol.Chem. 2006 281 25006 25010 2A7N Crystal Structure of the G81A mutant of the Active Chimera of (S)-Mandelate Dehydrogenase 2005-07-05 2006-07-11 Sukumar, N.,Xu, Y.,Mitra, B.,Mathews, F.S. Crystal Structures of the G81A Mutant of the Active Chimera of (S)-Mandelate Dehydrogenase and its Complex with Two of its Substrates To be Published 0 0 0 0 2A7P Crystal Structure of the G81A mutant of the Active Chimera of (S)-Mandelate Dehydrogenase in complex with its substrate 3-indolelactate 2005-07-05 2006-07-11 Sukumar, N.,Xu, Y.,Mitra, B.,Mathews, F.S. Crystal Structures of the G81A Mutant of the Active Chimera of (S)-Mandelate Dehydrogenase and its complex with Two of its Substrates To be Published 0 0 0 0 2AA0 Crystal structure of T. gondii adenosine kinase complexed with 6-methylmercaptopurine riboside 2005-07-13 2006-07-25 Zhang, Y.,El Kouni, M.H.,Ealick, S.E. Substrate analogs induce an intermediate conformational change in Toxoplasma gondii adenosine kinase Acta Crystallogr.,Sect.D 2007 63 126 134 2GB2 The P52G mutant of amicyanin in the Cu(II) state. 2006-03-09 2006-08-01 Ma, J.K.,Carrell, C.J.,Mathews, F.S.,Davidson, V.L. Site-Directed Mutagenesis of Proline 52 To Glycine in Amicyanin Converts a True Electron Transfer Reaction into One that Is Conformationally Gated. Biochemistry 2006 45 8284 8293 2GJW RNA Recognition and Cleavage by an Splicing Endonuclease 2006-03-31 2006-09-12 Xue, S.,Calvin, K.,Li, H. RNA Recognition and Cleavage by an Splicing Endonuclease Science 2006 312 902 910 2GP9 Crystal structure of the slow form of thrombin in a self-inhibited conformation 2006-04-17 2006-09-12 Pineda, A.O.,Chen, Z.W.,Bah, A.,Garvey, L.C.,Mathews, F.S.,Di Cera, E. Crystal structure of thrombin in a self-inhibited conformation. J.Biol.Chem. 2006 281 32922 32928 2G0B The structure of FeeM, an N-acyl amino acid synthase from uncultured soil microbes 2006-02-11 2006-09-26 Van Wagoner, R.M.,Clardy, J. FeeM, an N-Acyl Amino Acid Synthase from an Uncultured Soil Microbe: Structure, Mechanism, and Acyl Carrier Protein Binding. Structure 2006 14 1425 1435 2ID0 Escherichia coli RNase II 2006-09-13 2006-10-03 Zuo, Y.,Vincent, H.A.,Zhang, J.,Wang, Y.,Deutscher, M.P.,Malhotra, A. Structural Basis for Processivity and Single-Strand Specificity of RNase II. Mol.Cell 2006 24 149 156 2J3I CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA DOUBLE BOND REDUCTASE (AT5G16970)-BINARY COMPLEX 2006-08-21 2006-10-05 Youn, B.,Kim, S.J.,Moinuddin, S.G.,Lee, C.,Bedgar, D.L.,Harper, A.R.,Davin, L.B.,Lewis, N.G.,Kang, C. Mechanistic and structural studies of apoform, binary, and ternary complexes of the Arabidopsis alkenal double bond reductase At5g16970. J.Biol.Chem. 2006 281 40076 40088 2IL4 Crystal structure of At1g77540-Coenzyme A Complex 2006-10-02 2006-10-17 Tyler, R.C.,Bitto, E.,Berndsen, C.E.,Bingman, C.A.,Singh, S.,Lee, M.S.,Wesenberg, G.E.,Denu, J.M.,Phillips, G.N.,Markley, J.L. Structure of Arabidopsis thaliana At1g77540 Protein, a Minimal Acetyltransferase from the COG2388 Family. Biochemistry 2006 45 14325 14336 2H3X Crystal Structure of an Electron Transfer Complex Between Aromatic Amine Dehydrogenase and Azurin from Alcaligenes Faecalis (Form 3) 2006-05-23 2006-11-21 Sukumar, N.,Chen, Z.,Ferrari, D.,Merli, A.,Rossi, G.L.,Bellamy, H.D.,Chistoserdov, A.,Davidson, V.L.,Mathews, F.S. Crystal Structure of an Electron Transfer Complex between Aromatic Amine Dehydrogenase and Azurin from Alcaligenes faecalis. Biochemistry 2006 45 13500 13510 2HRU T. maritima PurL complexed with ADP 2006-07-20 2007-01-09 Morar, M.,Anand, R.,Hoskins, A.A.,Stubbe, J.,Ealick, S.E. Complexed Structures of Formylglycinamide Ribonucleotide Amidotransferase from Thermotoga maritima Describe a Novel ATP Binding Protein Superfamily Biochemistry 2006 45 14880 14895 2HS0 T. maritima PurL complexed with ATP 2006-07-20 2007-01-09 Morar, M.,Anand, R.,Hoskins, A.A.,Stubbe, J.,Ealick, S.E. Complexed Structures of Formylglycinamide Ribonucleotide Amidotransferase from Thermotoga maritima Describe a Novel ATP Binding Protein Superfamily Biochemistry 2006 45 14880 14895 2HS3 T. maritima PurL complexed with FGAR 2006-07-21 2007-01-09 Morar, M.,Anand, R.,Hoskins, A.A.,Stubbe, J.,Ealick, S.E. Complexed Structures of Formylglycinamide Ribonucleotide Amidotransferase from Thermotoga maritima Describe a Novel ATP Binding Protein Superfamily Biochemistry 2006 45 14880 14895 2HS4 T. maritima PurL complexed with FGAR and AMPPCP 2006-07-21 2007-01-09 Morar, M.,Anand, R.,Hoskins, A.A.,Stubbe, J.,Ealick, S.E. Complexed Structures of Formylglycinamide Ribonucleotide Amidotransferase from Thermotoga maritima Describe a Novel ATP Binding Protein Superfamily Biochemistry 2006 45 14880 14895 2INP Structure of the Phenol Hydroxylase-Regulatory Protein Complex 2006-10-08 2007-01-16 Sazinsky, M.H.,Dunten, P.W.,McCormick, M.S.,Didonato, A.,Lippard, S.J. X-ray Structure of a Hydroxylase-Regulatory Protein Complex from a Hydrocarbon-Oxidizing Multicomponent Monooxygenase, Pseudomonas sp. OX1 Phenol Hydroxylase. Biochemistry 2006 45 15392 15404 2IDT Structure of M98Q mutant of amicyanin, Cu(II) 2006-09-15 2007-03-13 Carrell, C.J.,Ma, J.K.,Antholine, W.E.,Hosler, J.P.,Mathews, F.S.,Davidson, V.L. Generation of Novel Copper Sites by Mutation of the Axial Ligand of Amicyanin. Atomic Resolution Structures and Spectroscopic Properties Biochemistry 2007 46 1900 1912 2NTK Crystal structure of PurO/IMP from Methanothermobacter thermoautotrophicus 2006-11-07 2007-04-24 Kang, Y.N.,Tran, A.,White, R.H.,Ealick, S.E. A novel function for the N-terminal nucleophile hydrolase fold demonstrated by the structure of an archaeal inosine monophosphate cyclohydrolase. Biochemistry 2007 46 5050 5062 2NTL Crystal structure of PurO/AICAR from Methanothermobacter thermoautotrophicus 2006-11-07 2007-04-24 Kang, Y.N.,Tran, A.,White, R.H.,Ealick, S.E. A novel function for the N-terminal nucleophile hydrolase fold demonstrated by the structure of an archaeal inosine monophosphate cyclohydrolase. Biochemistry 2007 46 5050 5062 2OVR Structure of the Skp1-Fbw7-CyclinEdegN complex 2007-02-14 2007-04-24 Hao, B.,Oehlmann, S.,Sowa, M.E.,Harper, J.W.,Pavletich, N.P. Structure of a Fbw7-Skp1-Cyclin E Complex: Multisite-Phosphorylated Substrate Recognition by SCF Ubiquitin Ligases Mol.Cell 2007 26 131 143 2Q4Y Ensemble refinement of the protein crystal structure of At1g77540-coenzyme A complex 2007-05-31 2007-06-19 Levin, E.J.,Kondrashov, D.A.,Wesenberg, G.E.,Phillips, G.N. Ensemble refinement of protein crystal structures: validation and application. Structure 2007 15 1040 1052 2P64 D domain of b-TrCP 2007-03-16 2007-06-19 Tang, X.,Orlicky, S.,Lin, Z.,Willems, A.,Neculai, D.,Ceccarelli, D.,Mercurio, F.,Shilton, B.H.,Sicheri, F.,Tyers, M. Suprafacial orientation of the SCFCdc4 dimer accommodates multiple geometries for substrate ubiquitination. Cell(Cambridge,Mass.) 2007 129 1165 1176 2PMV Crystal Structure of Human Intrinsic Factor- Cobalamin Complex at 2.6 A Resolution 2007-04-23 2007-10-30 Mathews, F.S.,Gordon, M.M.,Chen, Z.,Rajashankar, K.R.,Ealick, S.E.,Alpers, D.H.,Sukumar, N. Crystal structure of human intrinsic factor: Cobalamin complex at 2.6-A resolution Proc.Natl.Acad.Sci.USA 2007 104 17311 17316 2NTI Crystal structure of PCNA123 heterotrimer. 2006-11-07 2007-12-18 Hlinkova, V.,Guangxin, X.,Bauer, J.,Bell, S.D.,Ling, H. Structures of heterotrimeric, heterodimeric and monomeric PCNA from Sulfolobus solfataricus: PCNA assembly and major binding sites. To be Published 0 0 0 0 3BQ3 Crystal structure of S. cerevisiae Dcn1 2007-12-19 2008-01-29 Kurz, T.,Chou, Y.C.,Willems, A.R.,Meyer-Schaller, N.,Hecht, M.L.,Tyers, M.,Peter, M.,Sicheri, F. Dcn1 Functions as a Scaffold-Type E3 Ligase for Cullin Neddylation. Mol.Cell 2008 29 23 35 3BKT Copper-bound C-terminal Domain of NikR 2007-12-07 2008-02-19 Phillips, C.M.,Schreiter, E.R.,Guo, Y.,Wang, S.C.,Zamble, D.B.,Drennan, C.L. Structural Basis of the Metal Specificity for Nickel Regulatory Protein NikR. Biochemistry 2008 47 1938 1946 2PN4 Crystal Structure of Hepatitis C Virus IRES Subdomain IIa 2007-04-23 2008-04-01 Zhao, Q.,Han, Q.,Kissinger, C.R.,Hermann, T.,Thompson, P.A. Structure of hepatitis C virus IRES subdomain IIa Acta Crystallogr.,Sect.D 2008 64 436 443 2IO4 Crystal structure of PCNA12 dimer from Sulfolobus solfataricus. 2006-10-09 2008-04-08 Hlinkova, V.,Guangxin, X.,Bauer, J.,Bell, S.D.,Ling, H. Structures of heterotrimeric, heterodimeric and monomeric PCNA from Sulfolobus solfataricus: PCNA assembly and major binding sites. To be Published 0 0 0 0 2IO4 Crystal structure of PCNA12 dimer from Sulfolobus solfataricus. 2006-10-09 2008-04-08 Hlinkova, V.,Guangxin, X.,Bauer, J.,Bell, S.D.,Ling, H. Structures of heterotrimeric, heterodimeric and monomeric PCNA from Sulfolobus solfataricus: PCNA assembly and major binding sites. To be Published 0 0 0 0 2QS0 Quinolinate synthase from Pyrococcus furiosus 2007-07-30 2008-08-05 Soriano, E.V.,Colabroy, K.,Sanders, J.M.,Settembre, E.C.,Dorrestein, P.C.,Begley, T.P.,Ealick, S.E. Quinolinate synthase from Pyrococcus furiosus To be Published 0 0 0 0