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Crystal structure of the C-terminal domain of human DNA primase large subunit: Implications for the mechanism of the primase - polymerase alpha switch. Cell Cycle 2011 10 926 931 3Q6E 21473587 Human insulin in complex with cucurbit[7]uril 2010-12-31 2011-04-20 Chinai, J.M.,Taylor, A.B.,Ryno, L.M.,Hargreaves, N.D.,Morris, C.A.,Hart, P.J.,Urbach, A.R. Molecular recognition of insulin by a synthetic receptor. J.Am.Chem.Soc. 2011 133 8810 8813 3I2L Crystal structure of a chemically synthesized [allo-Ile50/50']HIV-1 protease molecule complexed with MVT-101 reduced isostere inhibitor 2009-06-29 2011-04-27 Torbeev, V.Y.,Kent, S.B.H. Hydrogen bonds at the protein-inhibitor interface in the HIV-1 protease / inhibitors complexes probed by total chemical synthesis and X-ray crystallography To be Published 0 0 0 0 3QVK 21616082 Allantoin racemase from Klebsiella pneumoniae 2011-02-25 2011-05-04 French, J.B.,Neau, D.B.,Ealick, S.E. Characterization of the Structure and Function of Klebsiella pneumoniae Allantoin Racemase. J.Mol.Biol. 2011 410 447 460 3QVL 21616082 Allantoin racemase from Klebsiella pneumoniae 2011-02-25 2011-05-04 French, J.B.,Neau, D.B.,Ealick, S.E. Characterization of the Structure and Function of Klebsiella pneumoniae Allantoin Racemase. J.Mol.Biol. 2011 410 447 460 2YFV 21606327 The heterotrimeric complex of Kluyveromyces lactis Scm3, Cse4 and H4 2011-04-08 2011-05-25 Cho, U.S.,Harrison, S.C. Recognition of the Centromere-Specific Histone Cse4 by the Chaperone Scm3. Proc.Natl.Acad.Sci.USA 2011 108 9367 0 2YFW 21606327 Heterotetramer structure of Kluyveromyces lactis Cse4,H4 2011-04-08 2011-05-25 Cho, U.S.,Harrison, S.C. Recognition of the Centromere-Specific Histone Cse4 by the Chaperone Scm3. Proc.Natl.Acad.Sci.USA 2011 108 9367 0 3MKG Low pH as-isolated tomato chloroplast superoxide dismutase 2010-04-14 2011-05-25 Galaleldeen, A.,Taylor, A.B.,Hart, P.J. Biophysical properties of tomato chloroplast sod To be Published 0 0 0 0 3Q25 21462277 Crystal structure of human alpha-synuclein (1-19) fused to maltose binding protein (MBP) 2010-12-19 2011-06-01 Zhao, M.,Cascio, D.,Sawaya, M.R.,Eisenberg, D. Structures of segments of alpha-synuclein fused to maltose-binding protein suggest intermediate states during amyloid formation Protein Sci. 2011 20 996 1004 3RB4 21645853 Dpo4 extension ternary complex with 3'-terminal primer G base opposite the 3-methylcytosine (m3c) lesion 2011-03-28 2011-06-15 Rechkoblit, O.,Delaney, J.C.,Essigmann, J.M.,Patel, D.J. Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions. Structure 2011 19 821 832 3RBE 21645853 Dpo4 extension ternary complex with 3'-terminal primer t base opposite the 3-methylcytosine (m3c) lesion 2011-03-29 2011-06-15 Rechkoblit, O.,Delaney, J.C.,Essigmann, J.M.,Patel, D.J. Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions. Structure 2011 19 821 832 3R4D 21670291 Crystal structure of mouse coronavirus receptor-binding domain complexed with its murine receptor 2011-03-17 2011-06-22 Peng, G.,Sun, D.,Rajashankar, K.R.,Qian, Z.,Holmes, K.V.,Li, F. Crystal structure of mouse coronavirus receptor-binding domain complexed with its murine receptor. Proc.Natl.Acad.Sci.USA 2011 108 10696 10701 3N90 The 1.7 Angstrom resolution crystal structure of AT2G44920, a pentapeptide repeat protein from Arabidopsis thaliana thylakoid lumen. 2010-05-28 2011-06-29 Ni, S.,Mckgookey, M.,Tinch, S.L.,Jones, A.N.,Jayaraman, S.,Kennedy, M.A. The 1.7 Angstrom resolution crystal structure of AT2G44920, a pentapeptide repeat protein from Arabidopsis thaliana thylakoid lumen. To be Published 0 0 0 0 3PPD 21677644 GGVLVN segment from Human Prostatic Acid Phosphatase Residues 260-265, involved in Semen-Derived Enhancer of Viral Infection 2010-11-24 2011-06-29 Sievers, S.A.,Karanicolas, J.,Chang, H.W.,Zhao, A.,Jiang, L.,Zirafi, O.,Stevens, J.T.,Munch, J.,Baker, D.,Eisenberg, D. Structure-based design of non-natural amino-acid inhibitors of amyloid fibril formation. Nature 2011 475 96 100 3OVJ 21695112 Structure of an amyloid forming peptide KLVFFA from amyloid beta in complex with orange G 2010-09-16 2011-07-06 Landau, M.,Sawaya, M.R.,Faull, K.F.,Laganowsky, A.,Jiang, L.,Sievers, S.A.,Liu, J.,Barrio, J.R.,Eisenberg, D. Towards a pharmacophore for amyloid. Plos Biol. 2011 9 0 0 3OVJ 21695112 Structure of an amyloid forming peptide KLVFFA from amyloid beta in complex with orange G 2010-09-16 2011-07-06 Landau, M.,Sawaya, M.R.,Faull, K.F.,Laganowsky, A.,Jiang, L.,Sievers, S.A.,Liu, J.,Barrio, J.R.,Eisenberg, D. Towards a pharmacophore for amyloid. Plos Biol. 2011 9 0 0 3OVL 21695112 Structure of an amyloid forming peptide VQIVYK from the TAU protein in complex with orange G 2010-09-16 2011-07-06 Landau, M.,Sawaya, M.R.,Faull, K.F.,Laganowsky, A.,Jiang, L.,Sievers, S.A.,Liu, J.,Barrio, J.R.,Eisenberg, D. Towards a pharmacophore for amyloid. Plos Biol. 2011 9 0 0 3RBW Crystal structure of Spire KIND domain 2011-03-30 2011-07-06 Vizcarra, C.,Kreutz, B.,Rodal, A.,Toms, A.,Lu, J.,Zheng, W.,Quinlan, M.,Eck, M. Structure of the Spire KIND domain and insights into its interaction with Fmn-family formins Proc.Natl.Acad.Sci.USA 2011 0 0 0 3RZ3 21683433 Human Cdc34 E2 in complex with CC0651 inhibitor 2011-05-11 2011-07-06 Ceccarelli, D.F.,Tang, X.,Pelletier, B.,Orlicky, S.,Xie, W.,Plantevin, V.,Neculai, D.,Chou, Y.C.,Ogunjimi, A.,Al-Hakim, A.,Varelas, X.,Koszela, J.,Wasney, G.A.,Vedadi, M.,Dhe-Paganon, S.,Cox, S.,Xu, S.,Lopez-Girona, A.,Mercurio, F.,Wrana, J.,Durocher, D.,Meloche, S.,Webb, D.R.,Tyers, M.,Sicheri, F. An allosteric inhibitor of the human cdc34 ubiquitin conjugating enzyme Cell(Cambridge,Mass.) 2011 145 1075 1087 3NS8 22542781 Crystal structure of an open conformation of Lys48-linked diubiquitin at pH 7.5 2010-07-01 2011-07-20 Lai, M.Y.,Zhang, D.,Laronde-Leblanc, N.,Fushman, D. Structural and biochemical studies of the open state of Lys48-linked diubiquitin. Biochim.Biophys.Acta 2012 1823 2046 2056 3RTR 21765416 A RING E3-substrate complex poised for ubiquitin-like protein transfer: structural insights into cullin-RING ligases 2011-05-03 2011-07-20 Calabrese, M.F.,Scott, D.C.,Duda, D.M.,Grace, C.R.,Kurinov, I.,Kriwacki, R.W.,Schulman, B.A. A RING E3-substrate complex poised for ubiquitin-like protein transfer: structural insights into cullin-RING ligases. Nat.Struct.Mol.Biol. 2011 18 947 949 3SKK 21728378 Crystal structure of human arginase I in complex with the inhibitor FABH, Resolution 1.70 A, twinned structure 2011-06-22 2011-07-20 Ilies, M.,Di Costanzo, L.,Dowling, D.P.,Thorn, K.J.,Christianson, D.W. Binding of alpha , alpha-disubstituted amino acids to arginase suggests new avenues for inhibitor design. J.Med.Chem. 2011 54 5432 5443 3SL0 21728378 Crystal Structure of P. falciparum arginase complexed with 2-amino-6-borono-2-(difluoromethyl)hexanoic acid 2011-06-23 2011-07-20 Ilies, M.,Di Costanzo, L.,Dowling, D.P.,Thorn, K.J.,Christianson, D.W. Binding of alpha , alpha-disubstituted amino acids to arginase suggests new avenues for inhibitor design. J.Med.Chem. 2011 54 5432 5443 3SL1 21728378 Crystal Structure of P. falciparum arginase complexed with 2-amino-6-borono-2-methylhexanoic acid 2011-06-23 2011-07-20 Ilies, M.,Di Costanzo, L.,Dowling, D.P.,Thorn, K.J.,Christianson, D.W. Binding of alpha , alpha-disubstituted amino acids to arginase suggests new avenues for inhibitor design. J.Med.Chem. 2011 54 5432 5443 3SL1 21728378 Crystal Structure of P. falciparum arginase complexed with 2-amino-6-borono-2-methylhexanoic acid 2011-06-23 2011-07-20 Ilies, M.,Di Costanzo, L.,Dowling, D.P.,Thorn, K.J.,Christianson, D.W. Binding of alpha , alpha-disubstituted amino acids to arginase suggests new avenues for inhibitor design. J.Med.Chem. 2011 54 5432 5443 3SL1 21728378 Crystal Structure of P. falciparum arginase complexed with 2-amino-6-borono-2-methylhexanoic acid 2011-06-23 2011-07-20 Ilies, M.,Di Costanzo, L.,Dowling, D.P.,Thorn, K.J.,Christianson, D.W. Binding of alpha , alpha-disubstituted amino acids to arginase suggests new avenues for inhibitor design. J.Med.Chem. 2011 54 5432 5443 3QTK 21744452 The crystal structure of chemically synthesized VEGF-A 2011-02-22 2011-07-27 Mandal, K.,Kent, S.B. Total chemical synthesis of biologically active vascular endothelial growth factor. Angew.Chem.Int.Ed.Engl. 2011 50 8029 8033 3S4W 21764741 Structure of the FANCI-FANCD2 complex 2011-05-20 2011-07-27 Joo, W.,Xu, G.,Persky, N.S.,Smogorzewska, A.,Rudge, D.G.,Buzovetsky, O.,Elledge, S.J.,Pavletich, N.P. Structure of the FANCI-FANCD2 complex: insights into the Fanconi anemia DNA repair pathway. Science 2011 333 312 316 3S4Z 21764741 Structure of a Y DNA-FANCI complex 2011-05-20 2011-07-27 Joo, W.,Xu, G.,Persky, N.S.,Smogorzewska, A.,Rudge, D.G.,Buzovetsky, O.,Elledge, S.J.,Pavletich, N.P. Structure of the FANCI-FANCD2 complex: insights into the Fanconi anemia DNA repair pathway. Science 2011 333 312 316 3RV1 21784247 Crystal structure of the N-terminal and RNase III domains of K. polysporus Dcr1 E224Q mutant 2011-05-05 2011-08-03 Weinberg, D.E.,Nakanishi, K.,Patel, D.J.,Bartel, D.P. The inside-out mechanism of dicers from budding yeasts. Cell(Cambridge,Mass.) 2011 146 262 276 3RN9 21859951 Structure of the Toluene/o-Xylene Monooxygenase Hydroxylase T201S/L272E Double Mutant 2011-04-22 2011-08-17 Song, W.J.,Gucinski, G.,Sazinsky, M.H.,Lippard, S.J. Tracking a defined route for O2 migration in a dioxygen-activating diiron enzyme. Proc.Natl.Acad.Sci.USA 2011 108 14795 14800 3RNA 21859951 Structure of the Toluene/o-Xylene Monooxygenase Hydroxylase T201S/I100W Double Mutant 2011-04-22 2011-08-17 Song, W.J.,Gucinski, G.,Sazinsky, M.H.,Lippard, S.J. Tracking a defined route for O2 migration in a dioxygen-activating diiron enzyme. Proc.Natl.Acad.Sci.USA 2011 108 14795 14800 3RNB 21859951 Structure of the Toluene/o-Xylene Monooxygenase Hydroxylase T201S/F176W Double Mutant 2011-04-22 2011-08-17 Song, W.J.,Gucinski, G.,Sazinsky, M.H.,Lippard, S.J. Tracking a defined route for O2 migration in a dioxygen-activating diiron enzyme. Proc.Natl.Acad.Sci.USA 2011 108 14795 14800 3RNC 21859951 Structure of the Toluene/o-Xylene Monooxygenase Hydroxylase T201S/I100A Double Mutant 2011-04-22 2011-08-17 Song, W.J.,Gucinski, G.,Sazinsky, M.H.,Lippard, S.J. Tracking a defined route for O2 migration in a dioxygen-activating diiron enzyme. Proc.Natl.Acad.Sci.USA 2011 108 14795 14800 3RNE 21859951 Structure of the Toluene/o-Xylene Monooxygenase Hydroxylase T201S/I276E Double Mutant 2011-04-22 2011-08-17 Song, W.J.,Gucinski, G.,Sazinsky, M.H.,Lippard, S.J. Tracking a defined route for O2 migration in a dioxygen-activating diiron enzyme. Proc.Natl.Acad.Sci.USA 2011 108 14795 14800 3RNG 21859951 Structure of the Toluene/o-Xylene Monooxygenase Hydroxylase T201S/W167E Double Mutant 2011-04-22 2011-08-17 Song, W.J.,Gucinski, G.,Sazinsky, M.H.,Lippard, S.J. Tracking a defined route for O2 migration in a dioxygen-activating diiron enzyme. 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Proc.Natl.Acad.Sci.USA 2011 108 16938 16943 3QS5 21952050 Crystal structure of LeuT mutant I359Q bound to sodium and L-tryptophan 2011-02-19 2011-10-12 Piscitelli, C.L.,Gouaux, E. Insights into transport mechanism from LeuT engineered to transport tryptophan. Embo J. 2012 31 228 235 3SCX 21923197 RB69 DNA Polymerase Triple Mutant(L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-terminated Primer in the Presence of Ca2+ 2011-06-08 2011-10-12 Xia, S.,Wang, M.,Blaha, G.,Konigsberg, W.H.,Wang, J. Structural Insights into Complete Metal Ion Coordination from Ternary Complexes of B Family RB69 DNA Polymerase. Biochemistry 2011 50 9114 9124 3SI6 21923197 RB69 DNA Polymerase Triple Mutant (L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-terminated Primer in the presence of Mg2+ 2011-06-17 2011-10-12 Xia, S.,Wang, M.,Blaha, G.,Konigsberg, W.H.,Wang, J. Structural Insights into Complete Metal Ion Coordination from Ternary Complexes of B Family RB69 DNA Polymerase. 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Structure 2013 21 42 53 4GWG 23153533 Crystal Structure Analysis of 6-phosphogluconate dehydrogenase apo-form 2012-09-03 2012-11-28 Hitosugi, T.,Zhou, L.,Elf, S.,Fan, J.,Kang, H.B.,Seo, J.H.,Shan, C.,Dai, Q.,Zhang, L.,Xie, J.,Gu, T.L.,Jin, P.,Aleckovic, M.,Leroy, G.,Kang, Y.,Sudderth, J.A.,Deberardinis, R.J.,Luan, C.H.,Chen, G.Z.,Muller, S.,Shin, D.M.,Owonikoko, T.K.,Lonial, S.,Arellano, M.L.,Khoury, H.J.,Khuri, F.R.,Lee, B.H.,Ye, K.,Boggon, T.J.,Kang, S.,He, C.,Chen, J. Phosphoglycerate mutase 1 coordinates glycolysis and biosynthesis to promote tumor growth. Cancer Cell 2012 22 585 600 4FJ5 23214497 RB69 DNA polymerase ternary complex with dATP/dT 2012-06-11 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FJ7 23214497 RB69 DNA polymerase ternary complex with dGTP/dT 2012-06-11 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FJ8 23214497 RB69 DNA polymerase ternary complex with dCTP/dT 2012-06-11 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FJ9 23214497 RB69 DNA polymerase ternary complex with dTTP/dT 2012-06-11 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FJG 23214497 RB69 DNA polymerase ternary complex with dATP/dC 2012-06-11 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FJH 23214497 RB69 DNA polymerase ternary complex with dGTP/dC 2012-06-11 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FJI 23214497 RB69 DNA polymerase ternary complex with dcTP/dC 2012-06-11 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FJJ 23214497 RB69 DNA polymerase ternary complex with dTTP/dC 2012-06-11 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FJK 23214497 RB69 DNA polymerase ternary complex with dATP/dA 2012-06-11 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FJL 23214497 RB69 DNA polymerase ternary complex with dGTP/dA 2012-06-11 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FJM 23214497 RB69 DNA polymerase ternary complex with dCTP/dA 2012-06-11 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FJN 23214497 RB69 DNA polymerase ternary complex with dTTP/dA 2012-06-11 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FJX 23214497 RB69 DNA polymerase ternary complex with dATP/dG 2012-06-12 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FK0 23214497 RB69 DNA polymerase ternary complex with dCTP/dG 2012-06-12 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FK2 23214497 RB69 DNA polymerase ternary complex with dTTP/dG 2012-06-12 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4FK4 23214497 RB69 DNA polymerase ternary complex with dGTP/dG 2012-06-12 2012-12-19 Xia, S.,Wang, J.,Konigsberg, W.H. DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase. J.Am.Chem.Soc. 2013 135 193 202 4GCP 23201272 Crystal Structure of E. coli OmpF porin in complex with Ampicillin 2012-07-30 2012-12-19 Ziervogel, B.K.,Roux, B. The Binding of Antibiotics in OmpF Porin. Structure 2013 21 76 87 4GCQ 23201272 Crystal Structure of E. coli OmpF porin in complex with Carbenicillin 2012-07-30 2012-12-19 Ziervogel, B.K.,Roux, B. The Binding of Antibiotics in OmpF Porin. Structure 2013 21 76 87 4GCS 23201272 Crystal Structure of E. coli OmpF porin in complex with Ertapenem 2012-07-30 2012-12-19 Ziervogel, B.K.,Roux, B. The Binding of Antibiotics in OmpF Porin. Structure 2013 21 76 87 4GSX 23236058 High resolution structure of dengue virus serotype 1 sE containing stem 2012-08-28 2012-12-19 Klein, D.E.,Choi, J.L.,Harrison, S.C. Structure of a dengue virus envelope protein late-stage fusion intermediate. J.Virol. 2013 87 2287 2293 3V78 22821564 Crystal Structure of Transcriptional Regulator 2011-12-20 2012-12-26 Bolla, J.R.,Do, S.V.,Long, F.,Dai, L.,Su, C.C.,Lei, H.T.,Chen, X.,Gerkey, J.E.,Murphy, D.C.,Rajashankar, K.R.,Zhang, Q.,Yu, E.W. Structural and functional analysis of the transcriptional regulator Rv3066 of Mycobacterium tuberculosis. Nucleic Acids Res. 2012 40 9340 9355 3VFJ 23519660 The structure of monodechloro-teicoplanin in complex with its ligand, using MBP as a ligand carrier 2012-01-09 2013-01-09 Economou, N.J.,Zentner, I.J.,Lazo, E.,Jakoncic, J.,Stojanoff, V.,Weeks, S.D.,Grasty, K.C.,Cocklin, S.,Loll, P.J. Structure of the complex between teicoplanin and a bacterial cell-wall peptide: use of a carrier-protein approach. Acta Crystallogr.,Sect.D 2013 69 520 533 3VFK 23519660 The structure of monodechloro-teicoplanin in complex with its ligand, using ubiquitin as a ligand carrier 2012-01-09 2013-01-09 Economou, N.J.,Zentner, I.J.,Lazo, E.,Jakoncic, J.,Stojanoff, V.,Weeks, S.D.,Grasty, K.C.,Cocklin, S.,Loll, P.J. Structure of the complex between teicoplanin and a bacterial cell-wall peptide: use of a carrier-protein approach. Acta Crystallogr.,Sect.D 2013 69 520 533 4EYH 23268450 Human DNA polymerase iota incorporating dCTP opposite N-(deoxyguanosin-8-yl)-1-aminopyrene lesion 2012-05-01 2013-01-09 Kirouac, K.N.,Basu, A.K.,Ling, H. Replication of a carcinogenic nitropyrene DNA lesion by human Y-family DNA polymerase. Nucleic Acids Res. 2013 41 2060 2071 4EYI 23268450 Human DNA polymerase iota incorporating dATP opposite N-(deoxyguanosin-8-yl)-1-aminopyrene lesion 2012-05-01 2013-01-09 Kirouac, K.N.,Basu, A.K.,Ling, H. Replication of a carcinogenic nitropyrene DNA lesion by human Y-family DNA polymerase. Nucleic Acids Res. 2013 41 2060 2071 4FQX 23260142 Crystal structure of HLA-DM bound to HLA-DR1 2012-06-25 2013-01-09 Pos, W.,Sethi, D.K.,Call, M.J.,Schulze, M.S.,Anders, A.K.,Pyrdol, J.,Wucherpfennig, K.W. Crystal Structure of the HLA-DM-HLA-DR1 Complex Defines Mechanisms for Rapid Peptide Selection. Cell(Cambridge,Mass.) 2012 151 1557 1568 4FUM 23277549 Structural basis for Zn2+-dependent intercellular adhesion in staphylococcal biofilms 2012-06-28 2013-01-16 Conrady, D.G.,Wilson, J.J.,Herr, A.B. Structural basis for Zn2+-dependent intercellular adhesion in staphylococcal biofilms. Proc.Natl.Acad.Sci.USA 2013 110 0 0 4FUO 23277549 Structural basis for Zn2+-dependent intercellular adhesion in staphylococcal biofilms 2012-06-28 2013-01-16 Conrady, D.G.,Wilson, J.J.,Herr, A.B. Structural basis for Zn2+-dependent intercellular adhesion in staphylococcal biofilms. Proc.Natl.Acad.Sci.USA 2013 110 0 0 4FUP 23277549 Structural basis for Zn2+-dependent intercellular adhesion in staphylococcal biofilms 2012-06-28 2013-01-16 Conrady, D.G.,Wilson, J.J.,Herr, A.B. Structural basis for Zn2+-dependent intercellular adhesion in staphylococcal biofilms. Proc.Natl.Acad.Sci.USA 2013 110 0 0 4GBX 23260142 Crystal structure of an immune complex at pH 6.5 2012-07-28 2013-01-16 Pos, W.,Sethi, D.K.,Call, M.J.,Schulze, M.S.,Anders, A.K.,Pyrdol, J.,Wucherpfennig, K.W. Crystal Structure of the HLA-DM-HLA-DR1 Complex Defines Mechanisms for Rapid Peptide Selection. Cell(Cambridge,Mass.) 2012 151 1557 1568 4I6L 23287719 Crystal structure of OTUB1 in complex with ubiquitin variant 2012-11-29 2013-01-16 Ernst, A.,Avvakumov, G.,Tong, J.,Fan, Y.,Zhao, Y.,Alberts, P.,Persaud, A.,Walker, J.R.,Neculai, A.M.,Neculai, D.,Vorobyov, A.,Garg, P.,Beatty, L.,Chan, P.K.,Juang, Y.C.,Landry, M.C.,Yeh, C.,Zeqiraj, E.,Karamboulas, K.,Allali-Hassani, A.,Vedadi, M.,Tyers, M.,Moffat, J.,Sicheri, F.,Pelletier, L.,Durocher, D.,Raught, B.,Rotin, D.,Yang, J.,Moran, M.F.,Dhe-Paganon, S.,Sidhu, S.S. A strategy for modulation of enzymes in the ubiquitin system. Science 2013 339 590 595 4IJB Crystal Structure of Engineered Protein, Northeast Structural Genomics Consortium Target OR288 2012-12-21 2013-01-16 Vorobiev, S.,Su, M.,Bick, M.J.,Seetharaman, J.,Khare, S.,Maglaqui, M.,Xiao, R.,Lee, D.,Day, A.,Everett, J.K.,Acton, T.B.,Baker, D.,Montelione, G.T.,Hunt, J.,Tong, L. Crystal Structure of Engineered Protein OR288. To be Published 0 0 0 0 4INA Crystal Structure of the Q7MSS8_WOLSU protein from Wolinella succinogenes. Northeast Structural Genomics Consortium Target WsR35 2013-01-04 2013-01-16 Vorobiev, S.,Su, M.,Seetharaman, J.,Maglaqui, M.,Xiao, R.,Kohan, E.,Wang, D.,Everett, J.K.,Acton, T.B.,Montelione, G.T.,Tong, L.,Hunt, J.F. Crystal Structure of the Q7MSS8_WOLSU protein from Wolinella succinogenes. To be Published 0 0 0 0 4IOH Crystal Structure of the Tll1086 protein from Thermosynechococcus elongatus, Northeast Structural Genomics Consortium Target TeR258 2013-01-07 2013-01-30 Vorobiev, S.,Su, M.,Seetharaman, J.,Maglaqui, M.,Xiao, X.,Kohan, E.,Wang, D.,Everett, J.K.,Acton, T.B.,Montelione, G.T.,Tong, L.,Hunt, J.F. Crystal Structure of the Tll1086 protein from Thermosynechococcus elongatus. To be Published 0 0 0 0 4II3 23416107 Crystal structure of S. pombe Ubiquitin activating enzyme 1 (Uba1) in complex with ubiquitin and ATP/Mg 2012-12-19 2013-02-13 Olsen, S.K.,Lima, C.D. Structure of a ubiquitin E1-E2 complex: insights to E1-E2 thioester transfer. Mol.Cell 2013 49 884 896 4IUZ 23343390 High resolution crystal structure of racemic ester insulin 2013-01-22 2013-02-13 Avital-Shmilovici, M.,Mandal, K.,Gates, Z.P.,Phillips, N.B.,Weiss, M.A.,Kent, S.B. Fully Convergent Chemical Synthesis of Ester Insulin: Determination of the High Resolution X-ray Structure by Racemic Protein Crystallography. J.Am.Chem.Soc. 2013 135 3173 3185 4G4N 23404556 MutM containing M77A mutation bound to undamaged DNA 2012-07-16 2013-02-20 Sung, R.J.,Zhang, M.,Qi, Y.,Verdine, G.L. Structural and Biochemical Analysis of DNA Helix Invasion by the Bacterial 8-Oxoguanine DNA Glycosylase MutM. J.Biol.Chem. 2013 288 10012 10023 4G4O 23404556 MutM containing M77A mutation bound to oxoG-containing DNA 2012-07-16 2013-02-20 Sung, R.J.,Zhang, M.,Qi, Y.,Verdine, G.L. Structural and Biochemical Analysis of DNA Helix Invasion by the Bacterial 8-Oxoguanine DNA Glycosylase MutM. J.Biol.Chem. 2013 288 10012 10023 4G4Q 23404556 MutM containing F114A mutation bound to undamaged DNA 2012-07-16 2013-02-20 Sung, R.J.,Zhang, M.,Qi, Y.,Verdine, G.L. Structural and Biochemical Analysis of DNA Helix Invasion by the Bacterial 8-Oxoguanine DNA Glycosylase MutM. J.Biol.Chem. 2013 288 10012 10023 4G4R 23404556 MutM containing F114A mutation bound to oxoG-containing DNA 2012-07-16 2013-02-20 Sung, R.J.,Zhang, M.,Qi, Y.,Verdine, G.L. Structural and Biochemical Analysis of DNA Helix Invasion by the Bacterial 8-Oxoguanine DNA Glycosylase MutM. J.Biol.Chem. 2013 288 10012 10023 4DV2 Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A 2012-02-22 2013-02-27 Demirci, H.,Murphy IV, F.,Murphy, E.,Gregory, S.T.,Dahlberg, A.E.,Jogl, G. A structural basis for streptomycin resistance To be Published 0 0 0 0 4DV3 Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A, bound with streptomycin 2012-02-22 2013-02-27 Demirci, H.,Murphy IV, F.,Murphy, E.,Gregory, S.T.,Dahlberg, A.E.,Jogl, G. A structural basis for streptomycin resistance To be Published 0 0 0 0 4HRG 23415230 Crystal Structure of p11-Annexin A2(N-terminal) Fusion Protein in Complex with AHNAK1 Peptide 2012-10-27 2013-03-06 Oh, Y.S.,Gao, P.,Lee, K.W.,Ceglia, I.,Seo, J.S.,Zhang, X.,Ahn, J.H.,Chait, B.T.,Patel, D.J.,Kim, Y.,Greengard, P. SMARCA3, a Chromatin-Remodeling Factor, Is Required for p11-Dependent Antidepressant Action. Cell(Cambridge,Mass.) 2013 152 831 843 4HRH 23415230 Crystal Structure of p11-Annexin A2(N-terminal) Fusion Protein in Complex with SMARCA3 Peptide 2012-10-27 2013-03-06 Oh, Y.S.,Gao, P.,Lee, K.W.,Ceglia, I.,Seo, J.S.,Zhang, X.,Ahn, J.H.,Chait, B.T.,Patel, D.J.,Kim, Y.,Greengard, P. SMARCA3, a Chromatin-Remodeling Factor, Is Required for p11-Dependent Antidepressant Action. Cell(Cambridge,Mass.) 2013 152 831 843 4IM0 23453972 Structure of Tank-Binding Kinase 1 2013-01-01 2013-03-06 Tu, D.,Zhu, Z.,Zhou, A.Y.,Yun, C.H.,Lee, K.E.,Toms, A.V.,Li, Y.,Dunn, G.P.,Chan, E.,Thai, T.,Yang, S.,Ficarro, S.B.,Marto, J.A.,Jeon, H.,Hahn, W.C.,Barbie, D.A.,Eck, M.J. Structure and ubiquitination-dependent activation of TANK-binding kinase 1. Cell Rep 2013 3 747 758 4IM2 23453972 Structure of Tank-Binding Kinase 1 2013-01-01 2013-03-06 Tu, D.,Zhu, Z.,Zhou, A.Y.,Yun, C.H.,Lee, K.E.,Toms, A.V.,Li, Y.,Dunn, G.P.,Chan, E.,Thai, T.,Yang, S.,Ficarro, S.B.,Marto, J.A.,Jeon, H.,Hahn, W.C.,Barbie, D.A.,Eck, M.J. Structure and ubiquitination-dependent activation of TANK-binding kinase 1. Cell Rep 2013 3 747 758 4IM3 23453972 Structure of Tank-Binding Kinase 1 2013-01-01 2013-03-06 Tu, D.,Zhu, Z.,Zhou, A.Y.,Yun, C.H.,Lee, K.E.,Toms, A.V.,Li, Y.,Dunn, G.P.,Chan, E.,Thai, T.,Yang, S.,Ficarro, S.B.,Marto, J.A.,Jeon, H.,Hahn, W.C.,Barbie, D.A.,Eck, M.J. Structure and ubiquitination-dependent activation of TANK-binding kinase 1. Cell Rep 2013 3 747 758 4J4Z Crystal structure of the improved variant of the evolved serine hydrolase, OSH55.4_H1.2, bond with sulfate ion in the active site, Northeast Structural Genomics Consortium (NESG) Target OR301 2013-02-07 2013-03-06 Kuzin, A.P.,Lew, S.,Rajagopalan, S.,Maglaqui, M.,Xiao, R.,Lee, D.,Everett, J.K.,Acton, T.B.,Baker, D.,Montelione, G.T.,Tong, L.,Hunt, J.F. Crystal structure of the improved variant of the evolved serine hydrolase, OSH55.4_H1.2, bond with sulfate ion in the active site, Northeast Structural Genomics Consortium (NESG) Target OR301 To be Published 0 0 0 0 4HR7 23499019 Crystal Structure of Biotin Carboxyl Carrier Protein-Biotin Carboxylase Complex from E.coli 2012-10-26 2013-03-13 Broussard, T.C.,Kobe, M.J.,Pakhomova, S.,Neau, D.B.,Price, A.E.,Champion, T.S.,Waldrop, G.L. The three-dimensional structure of the biotin carboxylase-biotin carboxyl carrier protein complex of E. coli acetyl-CoA carboxylase. Structure 2013 21 650 657 4J29 Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR258. 2013-02-04 2013-03-13 Vorobiev, S.,Su, M.,Koga, R.,Seetharaman, J.,Koga, N.,Mao, L.,Xiao, R.,Kohan, E.,Castelllanos, J.,Everett, J.K.,Acton, T.B.,Baker, D.,Montelione, G.T.,Tong, L.,Hunt, J.F. Crystal Structure of Engineered Protein OR258. To be Published 0 0 0 0 3TXA 23695252 Structural Analysis of Adhesive Tip pilin, GBS104 from Group B Streptococcus agalactiae 2011-09-23 2013-03-27 Krishnan, V.,Dwivedi, P.,Kim, B.J.,Samal, A.,Macon, K.,Ma, X.,Mishra, A.,Doran, K.S.,Ton-That, H.,Narayana, S.V. Structure of Streptococcus agalactiae tip pilin GBS104: a model for GBS pili assembly and host interactions. Acta Crystallogr.,Sect.D 2013 69 1073 1089 4J73 23481256 Crystal structure of beta'-COP/p25 complex 2013-02-12 2013-03-27 Ma, W.,Goldberg, J. Rules for the recognition of dilysine retrieval motifs by coatomer. Embo J. 2013 32 926 937 4J77 23481256 Crystal structure of beta'-COP/hWbp1 complex 2013-02-12 2013-03-27 Ma, W.,Goldberg, J. Rules for the recognition of dilysine retrieval motifs by coatomer. Embo J. 2013 32 926 937 4J78 23481256 Crystal structure of beta'-COP/Emp47p complex 2013-02-12 2013-03-27 Ma, W.,Goldberg, J. Rules for the recognition of dilysine retrieval motifs by coatomer. Embo J. 2013 32 926 937 4J79 23481256 Crystal structure of beta'-COP/PEDVspike complex 2013-02-12 2013-03-27 Ma, W.,Goldberg, J. Rules for the recognition of dilysine retrieval motifs by coatomer. Embo J. 2013 32 926 937 4J81 23481256 Crystal structure of beta'-COP/Insig-1 complex 2013-02-14 2013-03-27 Ma, W.,Goldberg, J. Rules for the recognition of dilysine retrieval motifs by coatomer. Embo J. 2013 32 926 937 4J82 23481256 Crystal structure of beta'-COP/Insig-2 complex 2013-02-14 2013-03-27 Ma, W.,Goldberg, J. Rules for the recognition of dilysine retrieval motifs by coatomer. Embo J. 2013 32 926 937 4J84 23481256 Crystal structure of beta'-COP/Scyl1 complex 2013-02-14 2013-03-27 Ma, W.,Goldberg, J. Rules for the recognition of dilysine retrieval motifs by coatomer. Embo J. 2013 32 926 937 4J86 23481256 Crystal structure of beta'-COP/yWbp1 complex 2013-02-14 2013-03-27 Ma, W.,Goldberg, J. Rules for the recognition of dilysine retrieval motifs by coatomer. Embo J. 2013 32 926 937 4J87 23481256 Crystal structure of alpha-COP 2013-02-14 2013-03-27 Ma, W.,Goldberg, J. Rules for the recognition of dilysine retrieval motifs by coatomer. Embo J. 2013 32 926 937 4J8B 23481256 Crystal structure of alpha-COP/Emp47p complex 2013-02-14 2013-03-27 Ma, W.,Goldberg, J. Rules for the recognition of dilysine retrieval motifs by coatomer. Embo J. 2013 32 926 937 4J8G 23481256 Crystal structure of alpha-COP/E19 complex 2013-02-14 2013-03-27 Ma, W.,Goldberg, J. Rules for the recognition of dilysine retrieval motifs by coatomer. Embo J. 2013 32 926 937 3T6N Crystal Structure of Transcriptional Regulator 2011-07-28 2013-04-17 Bolla, J.R.,Do, S.V.,Chen, X.,Yu, E.W. Crystal Structure of the Rv3066 Transcriptional Regulator from Mycobacterium tuberculosis To be Published 0 0 0 0 4I0O 23499022 Nucleoporin ELYS (aa1-494), Mus musculus 2012-11-17 2013-04-17 Bilokapic, S.,Schwartz, T.U. Structural and Functional Studies of the 252 kDa Nucleoporin ELYS Reveal Distinct Roles for Its Three Tethered Domains. Structure 2013 21 572 580 4JIN 23523885 X-ray crystal structure of Archaeoglobus fulgidus Rio1 bound to (2E)-N-benzyl-2-cyano-3-(pyridine-4-yl)acrylamide (WP1086) 2013-03-06 2013-04-24 Mielecki, M.,Krawiec, K.,Kiburu, I.,Grzelak, K.,Zagorski, W.,Kierdaszuk, B.,Kowa, K.,Fokt, I.,Szymanski, S.,Swierk, P.,Szeja, W.,Priebe, W.,Lesyng, B.,Laronde-Leblanc, N. Development of novel molecular probes of the Rio1 atypical protein kinase. Biochim.Biophys.Acta 2013 1834 1292 1301 4IUT 23636332 crystal structure of SHH1 SAWADEE domain in complex with H3K9me2 peptide 2013-01-21 2013-05-01 Law, J.A.,Du, J.,Hale, C.J.,Feng, S.,Krajewski, K.,Palanca, A.M.,Strahl, B.D.,Patel, D.J.,Jacobsen, S.E. Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1. 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J.Med.Chem. 2022 65 3123 3133 7RT3 34889605 Crystal Structure of KRAS G12D with compound 24 (4-(4-[(1R,5S)-3,8-diazabicyclo[3.2.1]octan-3-yl]-8-fluoro-2-{[(2S,4S,7aR)-2-fluorotetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}pyrido[4,3-d]pyrimidin-7-yl)naphthalen-2-ol) bound 2021-08-12 2021-12-22 Wang, X.,Allen, S.,Blake, J.F.,Bowcut, V.,Briere, D.M.,Calinisan, A.,Dahlke, J.R.,Fell, J.B.,Fischer, J.P.,Gunn, R.J.,Hallin, J.,Laguer, J.,Lawson, J.D.,Medwid, J.,Newhouse, B.,Nguyen, P.,O'Leary, J.M.,Olson, P.,Pajk, S.,Rahbaek, L.,Rodriguez, M.,Smith, C.R.,Tang, T.P.,Thomas, N.C.,Vanderpool, D.,Vigers, G.P.,Christensen, J.G.,Marx, M.A. Identification of MRTX1133, a Noncovalent, Potent, and Selective KRAS G12D Inhibitor. J.Med.Chem. 2022 65 3123 3133 7RT5 34889605 Crystal structure of KRAS G12D with compound 36 (4-[(1R,5S)-3,8-diazabicyclo[3.2.1]octan-3-yl]-7-(8-ethynyl-7-fluoronaphthalen-1-yl)-8-fluoro-2-{[(4s,7as)-tetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}pyrido[4,3-d]pyrimidine) bound 2021-08-12 2021-12-22 Wang, X.,Allen, S.,Blake, J.F.,Bowcut, V.,Briere, D.M.,Calinisan, A.,Dahlke, J.R.,Fell, J.B.,Fischer, J.P.,Gunn, R.J.,Hallin, J.,Laguer, J.,Lawson, J.D.,Medwid, J.,Newhouse, B.,Nguyen, P.,O'Leary, J.M.,Olson, P.,Pajk, S.,Rahbaek, L.,Rodriguez, M.,Smith, C.R.,Tang, T.P.,Thomas, N.C.,Vanderpool, D.,Vigers, G.P.,Christensen, J.G.,Marx, M.A. Identification of MRTX1133, a Noncovalent, Potent, and Selective KRAS G12D Inhibitor. J.Med.Chem. 2022 65 3123 3133 7T6Y 35234144 d((CGA)5TGA) parallel-stranded homo-duplex 2021-12-14 2021-12-22 Luteran, E.M.,Paukstelis, P.J. The parallel-stranded d(CGA) duplex is a highly predictable structural motif with two conformationally distinct strands. Acta Crystallogr D Struct Biol 2022 78 299 309 7L8L Crystal structure of human R152H GPX4-U46C 2020-12-31 2021-12-29 Liu, H.,Forouhar, F.,Seibt, T.,Saneto, R.,Wigby, K.,Friedman, J.,Xia, X.,Shchepinov, M.S.,Ramesh, S.,Conrad, M.,Stockwell, B.R. Patient-derived variant of GPX4 reveals the structural basis for its catalytic activity and degradation mechanism Nat.Chem.Biol. 2021 0 0 0 7L8Q Crystal structure of human GPX4-U46C with oxidized Cys-46 2020-12-31 2021-12-29 Liu, H.,Forouhar, F.,Seibt, T.,Saneto, R.,Wigby, K.,Friedman, J.,Xia, X.,Shchepinov, M.S.,Ramesh, S.,Conrad, M.,Stockwell, B.R. Patient-derived variant of GPX4 reveals the structural basis for its catalytic activity and degradation mechanism Nat.Chem.Biol. 2021 0 0 0 7S6R 34910460 Complex structure of Methane monooxygenase hydroxylase and regulatory subunit with H5A mutation 2021-09-14 2021-12-29 Jones, J.C.,Banerjee, R.,Semonis, M.M.,Shi, K.,Aihara, H.,Lipscomb, J.D. 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Nat.Chem.Biol. 2022 18 376 384 6XJW 35058645 Crystal structure of a self-alkylating ribozyme - alkylated form without biotin moiety 2020-06-24 2022-01-19 Krochmal, D.,Shao, Y.,Li, N.S.,DasGupta, S.,Shelke, S.A.,Koirala, D.,Piccirilli, J.A. Structural basis for substrate binding and catalysis by a self-alkylating ribozyme. Nat.Chem.Biol. 2022 18 376 384 6XJY 35058645 Crystal structure of a self-alkylating ribozyme - short time incubation with the epoxide substrate 2020-06-24 2022-01-19 Krochmal, D.,Shao, Y.,Li, N.S.,DasGupta, S.,Shelke, S.A.,Koirala, D.,Piccirilli, J.A. Structural basis for substrate binding and catalysis by a self-alkylating ribozyme. Nat.Chem.Biol. 2022 18 376 384 7KPJ 34548394 Crystal structure of Ruminococcus gnavus immunoglobulin binding protein in complex with 338E6 Fab 2020-11-11 2022-01-19 Borowska, M.T.,Drees, C.,Yarawsky, A.E.,Viswanathan, M.,Ryan, S.M.,Bunker, J.J.,Herr, A.B.,Bendelac, A.,Adams, E.J. 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Structural analysis of the macrocyclic inhibitor BI-4020 binding to the active and inactive conformations of EGFR kinase To be published 0 0 0 0 7LAF 34500187 15-lipoxygenase-2 loop mutant bound to imidazole-based inhibitor 2021-01-06 2022-01-19 Tsai, W.C.,Gilbert, N.C.,Ohler, A.,Armstrong, M.,Perry, S.,Kalyanaraman, C.,Yasgar, A.,Rai, G.,Simeonov, A.,Jadhav, A.,Standley, M.,Lee, H.W.,Crews, P.,Iavarone, A.T.,Jacobson, M.P.,Neau, D.B.,Offenbacher, A.R.,Newcomer, M.,Holman, T.R. Kinetic and structural investigations of novel inhibitors of human epithelial 15-lipoxygenase-2. Bioorg.Med.Chem. 2021 46 116349 116349 7LXE 35076015 ENAH EVH1 domain bound to peptide from ABI1 2021-03-03 2022-01-19 Hwang, T.,Parker, S.S.,Hill, S.M.,Grant, R.A.,Ilunga, M.W.,Sivaraman, V.,Mouneimne, G.,Keating, A.E. Native proline-rich motifs exploit sequence context to target actin-remodeling Ena/VASP protein ENAH. 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Nat Commun 2022 13 548 548 7MKK 35173350 Crystal structure of Drosophila Panoramix in complex with Sov NTD 2021-04-24 2022-02-02 Andreev, V.I.,Yu, C.,Wang, J.,Schnabl, J.,Tirian, L.,Gehre, M.,Handler, D.,Duchek, P.,Novatchkova, M.,Baumgartner, L.,Meixner, K.,Sienski, G.,Patel, D.J.,Brennecke, J. Panoramix SUMOylation on chromatin connects the piRNA pathway to the cellular heterochromatin machinery. Nat.Struct.Mol.Biol. 2022 29 130 142 7LQD 35167750 Structure of Human MPS1 (TTK) covalently bound to RMS-07 inhibitor 2021-02-13 2022-02-16 M Serafim, R.A.,da Silva Santiago, A.,Schwalm, M.P.,Hu, Z.,Dos Reis, C.V.,Takarada, J.E.,Mezzomo, P.,Massirer, K.B.,Kudolo, M.,Gerstenecker, S.,Chaikuad, A.,Zender, L.,Knapp, S.,Laufer, S.,Counago, R.M.,Gehringer, M. Development of the First Covalent Monopolar Spindle Kinase 1 (MPS1/TTK) Inhibitor. 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Nucleic Acids Res. 2022 50 9534 9547 7SOV 35979957 LaM domain of human LARP1 in complex with AAAAAAAAAAA RNA polynucleotide 2021-11-01 2022-08-03 Kozlov, G.,Mattijssen, S.,Jiang, J.,Nyandwi, S.,Sprules, T.,Iben, J.R.,Coon, S.L.,Gaidamakov, S.,Noronha, A.M.,Wilds, C.J.,Maraia, R.J.,Gehring, K. Structural basis of 3'-end poly(A) RNA recognition by LARP1. Nucleic Acids Res. 2022 50 9534 9547 7TPB 35970859 p120RasGAP SH3 domain in complex with DLC1 RhoGAP domain 2022-01-25 2022-08-03 Chau, J.E.,Vish, K.J.,Boggon, T.J.,Stiegler, A.L. SH3 domain regulation of RhoGAP activity: Crosstalk between p120RasGAP and DLC1 RhoGAP. Nat Commun 2022 13 4788 4788 7TQN 35879334 Structure of human TREX1 2022-01-26 2022-08-03 Zhou, W.,Richmond-Buccola, D.,Wang, Q.,Kranzusch, P.J. Structural basis of human TREX1 DNA degradation and autoimmune disease. Nat Commun 2022 13 4277 4277 7TQO 35879334 Structure of human TREX1 2022-01-26 2022-08-03 Zhou, W.,Richmond-Buccola, D.,Wang, Q.,Kranzusch, P.J. 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To Be Published 0 0 0 0 7TDW 35926508 Structure of FOXP3-DNA complex 2022-01-03 2022-08-10 Leng, F.,Zhang, W.,Ramirez, R.N.,Leon, J.,Zhong, Y.,Hou, L.,Yuki, K.,van der Veeken, J.,Rudensky, A.Y.,Benoist, C.,Hur, S. The transcription factor FoxP3 can fold into two dimerization states with divergent implications for regulatory T cell function and immune homeostasis. Immunity 2022 55 1354 0 7TDX 35926508 Structure of FOXP3-DNA complex 2022-01-03 2022-08-10 Leng, F.,Zhang, W.,Ramirez, R.N.,Leon, J.,Zhong, Y.,Hou, L.,Yuki, K.,van der Veeken, J.,Rudensky, A.Y.,Benoist, C.,Hur, S. The transcription factor FoxP3 can fold into two dimerization states with divergent implications for regulatory T cell function and immune homeostasis. Immunity 2022 55 1354 0 8DYS Crystal structure of human Eukaryotic translation initiation factor 2A (eIF2A) 2022-08-05 2022-08-17 Righetto, G.L.,Zeng, H.,Dong, A.,Li, Y.,Hutchinson, A.,Seitova, A.,Arrowsmith, C.H.,Edwards, A.M.,Halabelian, L.,Structural Genomics Consortium (SGC) Crystal structure of human Eukaryotic translation initiation factor 2A (eIF2A) To Be Published 0 0 0 0 7RWN 34515477 Crystal Structure of BPTF bromodomain in complex with 4-chloro-5-{4-[(dimethylamino)methyl]anilino}-2-methylpyridazin-3(2H)-one 2021-08-20 2022-08-24 Zahid, H.,Buchholz, C.R.,Singh, M.,Ciccone, M.F.,Chan, A.,Nithianantham, S.,Shi, K.,Aihara, H.,Fischer, M.,Schonbrunn, E.,Dos Santos, C.O.,Landry, J.W.,Pomerantz, W.C.K. New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition. J.Med.Chem. 2021 64 13902 13917 7RWO 34515477 Crystal Structure of BPTF bromodomain in complex with 4-chloro-2-methyl-5-[(1,2,3,4-tetrahydroisoquinolin-7-yl)amino]pyridazin-3(2H)-one 2021-08-20 2022-08-24 Zahid, H.,Buchholz, C.R.,Singh, M.,Ciccone, M.F.,Chan, A.,Nithianantham, S.,Shi, K.,Aihara, H.,Fischer, M.,Schonbrunn, E.,Dos Santos, C.O.,Landry, J.W.,Pomerantz, W.C.K. New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition. J.Med.Chem. 2021 64 13902 13917 7RWP 34515477 Crystal Structure of BPTF bromodomain in complex with 5-[4-(aminomethyl)anilino]-4-chloro-2-methylpyridazin-3(2H)-one 2021-08-20 2022-08-24 Zahid, H.,Buchholz, C.R.,Singh, M.,Ciccone, M.F.,Chan, A.,Nithianantham, S.,Shi, K.,Aihara, H.,Fischer, M.,Schonbrunn, E.,Dos Santos, C.O.,Landry, J.W.,Pomerantz, W.C.K. 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J.Med.Chem. 2021 64 13902 13917 7T1K 35613471 Crystal structure of a superbinder Fes SH2 domain (sFes1) in complex with a high affinity phosphopeptide 2021-12-02 2022-08-24 Martyn, G.D.,Veggiani, G.,Kusebauch, U.,Morrone, S.R.,Yates, B.P.,Singer, A.U.,Tong, J.,Manczyk, N.,Gish, G.,Sun, Z.,Kurinov, I.,Sicheri, F.,Moran, M.F.,Moritz, R.L.,Sidhu, S.S. Engineered SH2 Domains for Targeted Phosphoproteomics. Acs Chem.Biol. 2022 17 1472 1484 7T1L 35613471 Crystal structure of a superbinder Fes SH2 domain (sFesS) in complex with a high affinity phosphopeptide 2021-12-02 2022-08-24 Martyn, G.D.,Veggiani, G.,Kusebauch, U.,Morrone, S.R.,Yates, B.P.,Singer, A.U.,Tong, J.,Manczyk, N.,Gish, G.,Sun, Z.,Kurinov, I.,Sicheri, F.,Moran, M.F.,Moritz, R.L.,Sidhu, S.S. Engineered SH2 Domains for Targeted Phosphoproteomics. 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Front Immunol 2022 13 847092 847092 7UJ1 35998361 Crystal structure of PSF-RNA complex 2022-03-30 2022-09-28 Wang, J.,Sachpatzidis, A.,Christian, T.D.,Lomakin, I.B.,Garen, A.,Konigsberg, W.H. Insight into the Tumor Suppression Mechanism from the Structure of Human Polypyrimidine Splicing Factor (PSF/SFPQ) Complexed with a 30mer RNA from Murine Virus-like 30S Transcript-1. Biochemistry 2022 61 1723 1734 8D98 36073962 Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with fluorinated inhibitor 5 2022-06-09 2022-09-28 Watson, P.R.,Bai, P.,Wang, C.,Cragin, A.D.,Hooker, J.M.,Christianson, D.W. Aromatic Ring Fluorination Patterns Modulate Inhibitory Potency of Fluorophenylhydroxamates Complexed with Histone Deacetylase 6. 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Biochemistry 2022 61 1945 1954 8DDF 36091211 Quasi-racemic mixture of L-FWF and D-FYF peptide reveals rippled beta-sheet 2022-06-18 2022-09-28 Hazari, A.,Sawaya, M.R.,Vlahakis, N.,Johnstone, T.C.,Boyer, D.,Rodriguez, J.,Eisenberg, D.,Raskatov, J.A. The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey. Chem Sci 2022 13 8947 8952 8DDH 36091211 Racemic mixture of FYF peptide reveals rippled beta-sheet 2022-06-18 2022-09-28 Hazari, A.,Sawaya, M.R.,Vlahakis, N.,Johnstone, T.C.,Boyer, D.,Rodriguez, J.,Eisenberg, D.,Raskatov, J.A. The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey. 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Rna 2022 28 1509 1518 8E0F 36243986 Human Adenosine Deaminase Acting on dsRNA (ADAR2-RD) bound to dsRNA containing a G-G pair adjacent to the target site 2022-08-09 2022-10-26 Doherty, E.E.,Karki, A.,Wilcox, X.E.,Mendoza, H.G.,Manjunath, A.,Matos, V.J.,Fisher, A.J.,Beal, P.A. ADAR activation by inducing a syn conformation at guanosine adjacent to an editing site. Nucleic Acids Res. 2022 50 10857 10868 7SOL 35986001 Crystal Structures of the bispecific ubiquitin/FAT10 activating enzyme, Uba6 2021-10-31 2022-11-02 Yuan, L.,Gao, F.,Lv, Z.,Nayak, D.,Nayak, A.,Santos Bury, P.D.,Cano, K.E.,Jia, L.,Oleinik, N.,Atilgan, F.C.,Ogretmen, B.,Williams, K.M.,Davies, C.,El Oualid, F.,Wasmuth, E.V.,Olsen, S.K. Crystal structures reveal catalytic and regulatory mechanisms of the dual-specificity ubiquitin/FAT10 E1 enzyme Uba6. Nat Commun 2022 13 4880 4880 7UK2 36355493 Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with NN-390 2022-03-31 2022-11-02 Garcha, H.K.,Nawar, N.,Sorger, H.,Erdogan, F.,Aung, M.M.K.,Sedighi, A.,Manaswiyoungkul, P.,Seo, H.S.,Schonefeldt, S.,Poloske, D.,Dhe-Paganon, S.,Neubauer, H.A.,Mustjoki, S.M.,Herling, M.,de Araujo, E.D.,Moriggl, R.,Gunning, P.T. High Efficacy and Drug Synergy of HDAC6-Selective Inhibitor NN-429 in Natural Killer (NK)/T-Cell Lymphoma. Pharmaceuticals 2022 15 0 0 7ULO Potato leafroll virus N-terminal readthrough domain 2022-04-05 2022-11-02 Schiltz, C.J.,Wilson, J.R.,Hosford, C.J.,Adams, M.C.,Preising, S.E.,DeBlasio, S.L.,MacLeod, H.J.,Van Eck, J.,Heck, M.L.,Chappie, J.S. Polerovirus N-terminal readthrough domain structures reveal molecular strategies for mitigating virus transmission by aphids Nat Commun 2022 13 6368 0 8E7O 37938554 CRYSTAL STRUCTURE OF LYS48-LINKED TETRAUBIQUITIN 2022-08-24 2022-11-02 Lemma, B.,Zhang, D.,Vamisetti, G.B.,Wentz, B.G.,Suga, H.,Brik, A.,Lubkowski, J.,Fushman, D. Mechanism of selective recognition of Lys48-linked polyubiquitin by macrocyclic peptide inhibitors of proteasomal degradation. Nat Commun 2023 14 7212 7212 8EM8 Co-crystal structure of the cGMP-dependent protein kinase PKG from Plasmodium falciparum in complex with RY-1-165 2022-09-27 2022-11-02 Hutchinson, A.,Dong, A.,Seitova, A.,Bhanot, P.,Arrowsmith, C.H.,Edwards, A.M.,Halabelian, L.,Structural Genomics Consortium (SGC) Co-crystal structure of the cGMP-dependent protein kinase PKG from Plasmodium falciparum in complex with RY-1-165 To Be Published 0 0 0 0 7MKX Crystal Structure Analysis of human CDK2 and CCNA2 complex 2021-04-27 2022-11-09 Seo, H.-S.,Dhe-Paganon, S. Crystal Structure Analysis of human CDK2 and CCNA2 complex To Be Published 0 0 0 0 7MYX 35968932 Crystal structure of the PH domain (R86A) of Akt1 2021-05-22 2022-11-09 Bae, H.,Viennet, T.,Park, E.,Chu, N.,Salguero, A.,Eck, M.J.,Arthanari, H.,Cole, P.A. PH domain-mediated autoinhibition and oncogenic activation of Akt. Elife 2022 11 0 0 7MYX 35968932 Crystal structure of the PH domain (R86A) of Akt1 2021-05-22 2022-11-09 Bae, H.,Viennet, T.,Park, E.,Chu, N.,Salguero, A.,Eck, M.J.,Arthanari, H.,Cole, P.A. PH domain-mediated autoinhibition and oncogenic activation of Akt. Elife 2022 11 0 0 7S46 PAK4cat (D440N/S474E) in complex with Integrin beta5 760-770 peptide 2021-09-08 2022-11-09 Ha, B.H.,Yigit, S.,Natarajan, N.,Morse, E.M.,Calderwood, D.A.,Boggon, T.J. Molecular basis for integrin adhesion receptor binding to p21-activated kinase 4 (PAK4) Commun Biol 2022 5 1257 0 7S47 Integrin beta5(743-774)-linker-PAK4cat(D440N/S474E) 2021-09-08 2022-11-09 Ha, B.H.,Yigit, S.,Natarajan, N.,Morse, E.M.,Calderwood, D.A.,Boggon, T.J. Molecular basis for integrin adhesion receptor binding to p21-activated kinase 4 (PAK4) Commun Biol 2022 5 1257 0 7S48 PAK4cat in complex with Integrin beta5 760-770 peptide 2021-09-08 2022-11-09 Ha, B.H.,Yigit, S.,Natarajan, N.,Morse, E.M.,Calderwood, D.A.,Boggon, T.J. Molecular basis for integrin adhesion receptor binding to p21-activated kinase 4 (PAK4) Commun Biol 2022 5 1257 0 7S6U Leishmania infantum Glycogen Synthase Kinase 3 beta bound to AZD5438 2021-09-15 2022-11-09 Ramos, P.Z.,dos Reis, C.V.,Counago, R.M. Leishmania infantum Glycogen Synthase Kinase 3 beta bound to AZD5438 To Be Published 0 0 0 0 7S6V Leishmania infantum Glycogen Synthase Kinase 3 beta bound to CGP60474 2021-09-15 2022-11-09 Ramos, P.Z.,dos Reis, C.V.,Counago, R.M. Leishmania infantum Glycogen Synthase Kinase 3 beta bound to CGP60474 To Be Published 0 0 0 0 7TYD 36288716 Crystal structure of FGFR4 domain 3 in complex with a de novo-designed mini-binder in P21 space group 2022-02-12 2022-11-09 Park, J.S.,Choi, J.,Cao, L.,Mohanty, J.,Suzuki, Y.,Park, A.,Baker, D.,Schlessinger, J.,Lee, S. Isoform-specific inhibition of FGFR signaling achieved by a de-novo-designed mini-protein. Cell Rep 2022 41 111545 111545 8DP6 36347253 Crystal structure of Helicobacter pylori EgtU 2022-07-15 2022-11-09 Dumitrescu, D.G.,Gordon, E.M.,Kovalyova, Y.,Seminara, A.B.,Duncan-Lowey, B.,Forster, E.R.,Zhou, W.,Booth, C.J.,Shen, A.,Kranzusch, P.J.,Hatzios, S.K. A microbial transporter of the dietary antioxidant ergothioneine. Cell 2022 185 4526 0 8DP7 36347253 Structure of Helicobacter pylori EgtU bound to EGT 2022-07-15 2022-11-09 Dumitrescu, D.G.,Gordon, E.M.,Kovalyova, Y.,Seminara, A.B.,Duncan-Lowey, B.,Forster, E.R.,Zhou, W.,Booth, C.J.,Shen, A.,Kranzusch, P.J.,Hatzios, S.K. A microbial transporter of the dietary antioxidant ergothioneine. Cell 2022 185 4526 0 7UBX 36466927 Structure of a pore forming fragment of Clostridium difficile toxin A in complex with VHH AA6 2022-03-15 2022-11-16 Chen, B.,Perry, K.,Jin, R. Neutralizing epitopes on Clostridioides difficile toxin A revealed by the structures of two camelid VHH antibodies. Front Immunol 2022 13 978858 978858 7UBY 36466927 Structure of the GTD domain of Clostridium difficile toxin A in complex with VHH AH3 2022-03-15 2022-11-16 Chen, B.,Perry, K.,Jin, R. Neutralizing epitopes on Clostridioides difficile toxin A revealed by the structures of two camelid VHH antibodies. Front Immunol 2022 13 978858 978858 8D30 Crystal structure of the human COPB2 WD-domains 2022-05-31 2022-11-16 Zeng, H.,Dong, A.,Hutchinson, A.,Seitova, A.,Loppnau, P.,Arrowsmith, C.H.,Edwards, A.M.,Halabelian, L.,Structural Genomics Consortium (SGC) Crystal structure of the human COPB2 WD-domains To Be Published 0 0 0 0 8DYP 36113465 Crystal structure of human cystine transporter cystinosin 2022-08-04 2022-11-16 Guo, X.,Schmiege, P.,Assafa, T.E.,Wang, R.,Xu, Y.,Donnelly, L.,Fine, M.,Ni, X.,Jiang, J.,Millhauser, G.,Feng, L.,Li, X. Structure and mechanism of human cystine exporter cystinosin. Cell 2022 185 3739 0 7S83 36737435 Crystal structure of SARS CoV-2 Spike Receptor Binding Domain in complex with shark neutralizing VNARs ShAb01 and ShAb02 2021-09-17 2022-11-23 Chen, W.H.,Hajduczki, A.,Martinez, E.J.,Bai, H.,Matz, H.,Hill, T.M.,Lewitus, E.,Chang, W.C.,Dawit, L.,Peterson, C.E.,Rees, P.A.,Ajayi, A.B.,Golub, E.S.,Swafford, I.,Dussupt, V.,David, S.,Mayer, S.V.,Soman, S.,Kuklis, C.,Corbitt, C.,King, J.,Choe, M.,Sankhala, R.S.,Thomas, P.V.,Zemil, M.,Wieczorek, L.,Hart, T.,Duso, D.,Kummer, L.,Yan, L.,Sterling, S.L.,Laing, E.D.,Broder, C.C.,Williams, J.K.,Davidson, E.,Doranz, B.J.,Krebs, S.J.,Polonis, V.R.,Paquin-Proulx, D.,Rolland, M.,Reiley, W.W.,Gromowski, G.D.,Modjarrad, K.,Dooley, H.,Joyce, M.G. Shark nanobodies with potent SARS-CoV-2 neutralizing activity and broad sarbecovirus reactivity. Nat Commun 2023 14 580 580 7SUA Crystal Structure of the Hypothetical Protein (ACX60_00475) from Acinetobacter baumannii 2021-11-16 2022-11-30 Minasov, G.,Shuvalova, L.,Dubrovska, I.,Kiryukhina, O.,Satchell, K.J.F.,Center for Structural Genomics of Infectious Diseases (CSGID) Crystal Structure of the Hypothetical Protein (ACX60_00475) from Acinetobacter baumannii To be Published 0 0 0 0 7SUU Crystal Structure of Mouse Cadherin-23 EC25-26 2021-11-18 2022-11-30 Boyer, M.D.,Sandhu, J.S.,Sotomayor, M. Crystal Structure of Mouse Cadherin-23 EC25-26 to be published 0 0 0 0 7US3 36314559 Structure of Putrescine N-hydroxylase Involved Complexed with NADP+ 2022-04-22 2022-11-30 Lyons, N.S.,Bogner, A.N.,Tanner, J.J.,Sobrado, P. Kinetic and Structural Characterization of a Flavin-Dependent Putrescine N -Hydroxylase from Acinetobacter baumannii. Biochemistry 2022 61 2607 2620 8E1H 36468882 Asp1 kinase in complex with ADP Mg 5-IP7 2022-08-10 2022-11-30 Benjamin, B.,Goldgur, Y.,Jork, N.,Jessen, H.J.,Schwer, B.,Shuman, S. Structures of Fission Yeast Inositol Pyrophosphate Kinase Asp1 in Ligand-Free, Substrate-Bound, and Product-Bound States. Mbio 2022 13 0 0 8E1S 36468882 Asp1 kinase in complex with ADPNP Mn IP6 2022-08-11 2022-11-30 Benjamin, B.,Goldgur, Y.,Jork, N.,Jessen, H.J.,Schwer, B.,Shuman, S. Structures of Fission Yeast Inositol Pyrophosphate Kinase Asp1 in Ligand-Free, Substrate-Bound, and Product-Bound States. Mbio 2022 13 0 0 8E1T 36468882 Asp1 kinase in complex with ADPNP Mg IP7 2022-08-11 2022-11-30 Benjamin, B.,Goldgur, Y.,Jork, N.,Jessen, H.J.,Schwer, B.,Shuman, S. Structures of Fission Yeast Inositol Pyrophosphate Kinase Asp1 in Ligand-Free, Substrate-Bound, and Product-Bound States. Mbio 2022 13 0 0 8E1V 36468882 Asp1 kinase in complex with ADPNP Mg IP6 2022-08-11 2022-11-30 Benjamin, B.,Goldgur, Y.,Jork, N.,Jessen, H.J.,Schwer, B.,Shuman, S. Structures of Fission Yeast Inositol Pyrophosphate Kinase Asp1 in Ligand-Free, Substrate-Bound, and Product-Bound States. Mbio 2022 13 0 0 7SZC Crystal Structure Analysis of human PRPK complex with a compound 2021-11-27 2022-12-14 Seo, H.-S.,Mizutani, T.,Hideshima, T.,Vangos, N.E.,Zhang, T.,Anderson, K.C.,Gray, N.S.,Dhe-Paganon, S. Development of PRPK Directed Phthalimides Biorxiv 2021 0 0 0 7T25 OspA-Fab 319-44 complex structure 2021-12-03 2022-12-14 Rudolph, M.J. Structural analysis of OspA-31944 complex To Be Published 0 0 0 0 8DKP 36448708 Minimal PutA proline dehydrogenase domain (design #2) complexed with S-(-)-tetrahydro-2-furoic acid 2022-07-05 2022-12-14 Bogner, A.N.,Ji, J.,Tanner, J.J. Structure-based engineering of minimal proline dehydrogenase domains for inhibitor discovery. Protein Eng.Des.Sel. 2022 35 0 0 8DKQ 36448708 Minimal PutA proline dehydrogenase domain (design #2) complexed with 2-(Furan-2-yl)acetic acid 2022-07-05 2022-12-14 Bogner, A.N.,Ji, J.,Tanner, J.J. Structure-based engineering of minimal proline dehydrogenase domains for inhibitor discovery. Protein Eng.Des.Sel. 2022 35 0 0 8EJM 36459648 Crystal structure of human DEAH-box helicase DHX15 in complex with SUGP1 G-patch 2022-09-17 2022-12-14 Zhang, J.,Huang, J.,Xu, K.,Xing, P.,Huang, Y.,Liu, Z.,Tong, L.,Manley, J.L. DHX15 is involved in SUGP1-mediated RNA missplicing by mutant SF3B1 in cancer. Proc.Natl.Acad.Sci.USA 2022 119 0 0 8GXM 36459648 HUMAN SUGP1 433-586 2022-09-20 2022-12-14 Zhang, J.,Huang, J.,Xu, K.,Xing, P.,Huang, Y.,Liu, Z.,Tong, L.,Manley, J.L. DHX15 is involved in SUGP1-mediated RNA missplicing by mutant SF3B1 in cancer. Proc.Natl.Acad.Sci.USA 2022 119 0 0 7T3S Crystal Structure of Mouse Cadherin-23 EC8-9 2021-12-08 2022-12-21 Sandhu, J.S.,De La Torre, P.,Sotomayor, M. Crystal Structure of Mouse Cadherin-23 EC8-9 to be published 0 0 0 0 8FBD 36653893 Crystal structure of OrfX1-OrfX3 complex from Clostridium botulinum E1 2022-11-29 2022-12-21 Gao, L.,Lam, K.H.,Liu, S.,Przykopanski, A.,Lubke, J.,Qi, R.,Kruger, M.,Nowakowska, M.B.,Selby, K.,Douillard, F.P.,Dorner, M.B.,Perry, K.,Lindstrom, M.,Dorner, B.G.,Rummel, A.,Jin, R. Crystal structures of OrfX1, OrfX2 and the OrfX1-OrfX3 complex from the orfX gene cluster of botulinum neurotoxin E1. Febs Lett. 2023 597 524 537 8FBE 36653893 Crystal structure of OrfX1 from Clostridium botulinum E1 2022-11-29 2022-12-21 Gao, L.,Lam, K.H.,Liu, S.,Przykopanski, A.,Lubke, J.,Qi, R.,Kruger, M.,Nowakowska, M.B.,Selby, K.,Douillard, F.P.,Dorner, M.B.,Perry, K.,Lindstrom, M.,Dorner, B.G.,Rummel, A.,Jin, R. Crystal structures of OrfX1, OrfX2 and the OrfX1-OrfX3 complex from the orfX gene cluster of botulinum neurotoxin E1. Febs Lett. 2023 597 524 537 8FBF 36653893 Crystal structure of OrfX2 from Clostridium botulinum E1 2022-11-29 2022-12-21 Gao, L.,Lam, K.H.,Liu, S.,Przykopanski, A.,Lubke, J.,Qi, R.,Kruger, M.,Nowakowska, M.B.,Selby, K.,Douillard, F.P.,Dorner, M.B.,Perry, K.,Lindstrom, M.,Dorner, B.G.,Rummel, A.,Jin, R. Crystal structures of OrfX1, OrfX2 and the OrfX1-OrfX3 complex from the orfX gene cluster of botulinum neurotoxin E1. Febs Lett. 2023 597 524 537 7TSQ 36755092 Structure of Enterobacter cloacae Cap2 bound to CdnD02 C-terminus, AMP state 2022-01-31 2023-01-11 Ledvina, H.E.,Ye, Q.,Gu, Y.,Sullivan, A.E.,Quan, Y.,Lau, R.K.,Zhou, H.,Corbett, K.D.,Whiteley, A.T. An E1-E2 fusion protein primes antiviral immune signalling in bacteria. Nature 2023 616 319 325 8DQR 36737607 Crystal structure of Arabidopsis thaliana COSY in complex with scopoletin 2022-07-19 2023-01-11 Kim, C.Y.,Mitchell, A.J.,Kastner, D.W.,Albright, C.E.,Gutierrez, M.A.,Glinkerman, C.M.,Kulik, H.J.,Weng, J.K. Emergence of a proton exchange-based isomerization and lactonization mechanism in the plant coumarin synthase COSY. Nat Commun 2023 14 597 597 8EDK Structure of C. elegans UNC-6 LamN and EGF domains 2022-09-04 2023-01-11 Priest, J.M.,Ozkan, E. Structure of C. elegans UNC-6/Netrin LamN and 3 EGF Domains To Be Published 0 0 0 0 8ENB 36574673 Crystal structure of LGR ligand alpha2/beta5 from C. elegans in crystal form 2 2022-09-29 2023-01-11 Gong, Z.,Wang, W.,El Omari, K.,Lebedev, A.A.,Clarke, O.B.,Hendrickson, W.A. Crystal structure of LGR ligand alpha2/beta5 from Caenorhabditis elegans with implications for the evolution of glycoprotein hormones Proc Natl Acad Sci U S A 2023 120 0 0 8END 36574673 Crystal structure of LGR ligand alpha2/beta5 from C. elegans in crystal form 1 (SeMet) 2022-09-29 2023-01-11 Gong, Z.,Wang, W.,El Omari, K.,Lebedev, A.A.,Clarke, O.B.,Hendrickson, W.A. Crystal structure of LGR ligand alpha2/beta5 from Caenorhabditis elegans with implications for the evolution of glycoprotein hormones Proc Natl Acad Sci U S A 2023 120 0 0 8ENF 36574673 Crystal structure of LGR ligand alpha2/beta5 from C. elegans in crystal form 1 (native) 2022-09-29 2023-01-11 Gong, Z.,Wang, W.,El Omari, K.,Lebedev, A.A.,Clarke, O.B.,Hendrickson, W.A. Crystal structure of LGR ligand alpha2/beta5 from Caenorhabditis elegans with implications for the evolution of glycoprotein hormones Proc Natl Acad Sci U S A 2023 120 0 0 8EOM TUDOR DOMAIN OF TUMOR SUPPRESSOR P53BP1 WITH MFP-5973 2022-10-03 2023-01-18 The, J.,Hong, Z.,Headey, S.,Gunzburg, M.,Doak, B.,James, L.I.,Arrowsmith, C.H.,Edwards, A.M.,Brown, P.J.,Structural Genomics Consortium (SGC) TUDOR DOMAIN OF TUMOR SUPPRESSOR P53BP1 WITH MFP-5973 to be published 0 0 0 0 8FBH Crystal structure of NSD1 Mutant-T1927A 2022-11-29 2023-01-18 Providokhina, K.,Dong, A.,Arrowsmith, C.H.,Edwards, A.M.,Min, J.,Structural Genomics Consortium (SGC) Crystal structure of NSD1 To Be Published 0 0 0 0 7SZA Crystal Structure Analysis of human PRPK complex with a compound 2021-11-27 2023-01-25 Seo, H.-S.,Mizutani, T.,Hideshima, T.,Vangos, N.E.,Zhang, T.,Anderson, K.C.,Gray, N.S.,Dhe-Paganon, S. Development of PRPK Directed Phthalimides Biorxiv 2021 0 0 0 7SZB Crystal Structure Analysis of human PRPK complex with a compound 2021-11-27 2023-01-25 Seo, H.-S.,Mizutani, T.,Hideshima, T.,Vangos, N.E.,Zhang, T.,Anderson, K.C.,Gray, N.S.,Dhe-Paganon, S. Development of PRPK Directed Phthalimides Biorxiv 2021 0 0 0 7TAK Structure of a NAT transporter 2021-12-21 2023-01-25 Weng, J.,Zhou, X.,Ren, Z.,Chen, K.,Zhou, M. Structure of a NAT transporter To Be Published 0 0 0 0 7TJP HIV-1 gp120 complex with CJF-II-195 2022-01-16 2023-01-25 Chaplain, C.,Fritschi, C.J.,Anang, S.,Gong, Z.,Richard, J.,Bourassa, C.,Liang, S.,Mohammadi, M.,Park, J.,Finzi, A.,Madani, N.,Sodroski, J.G.,Abrams, C.F.,Hendrickson, W.A.,Smith, A.B. Structural and Functional Characterization of Indane-Core CD4-Mimetic Compounds Substituted with Heterocyclic Amines Acs Medicinal Chemistry Letter 2023 14 51 58 8EK6 36625542 UCA Y35N (unbound) Fab from CH65-CH67 lineage 2022-09-20 2023-01-25 Phillips, A.M.,Maurer, D.P.,Brooks, C.,Dupic, T.,Schmidt, A.G.,Desai, M.M. Hierarchical sequence-affinity landscapes shape the evolution of breadth in an anti-influenza receptor binding site antibody. Elife 2023 12 0 0 8EKH 36625542 I-2 Y35N H35N (unbound) Fab from CH65-CH67 lineage 2022-09-21 2023-01-25 Phillips, A.M.,Maurer, D.P.,Brooks, C.,Dupic, T.,Schmidt, A.G.,Desai, M.M. Hierarchical sequence-affinity landscapes shape the evolution of breadth in an anti-influenza receptor binding site antibody. Elife 2023 12 0 0 8ESH 36761745 Structure of chimeric HLA-A*02:01 bound to CMV peptide 2022-10-14 2023-01-25 Papadaki, G.F.,Ani, O.,Florio, T.J.,Young, M.C.,Danon, J.N.,Sun, Y.,Dersh, D.,Sgourakis, N.G. Decoupling peptide binding from T cell receptor recognition with engineered chimeric MHC-I molecules. Front Immunol 2023 14 1116906 1116906 8DKG 36713721 Structure of PYCR1 Thr171Met variant complexed with NADH 2022-07-05 2023-02-08 Daudu, O.I.,Meeks, K.R.,Zhang, L.,Seravalli, J.,Tanner, J.J.,Becker, D.F. Functional Impact of a Cancer-Related Variant in Human Delta 1 -Pyrroline-5-Carboxylate Reductase 1. Acs Omega 2023 8 3509 3519 7UG2 36147661 Crystal structure of the coiled-coil domain of TRIM75 2022-03-23 2023-02-15 Lou, X.,Ma, B.,Zhuang, Y.,Xiao, X.,Minze, L.J.,Xing, J.,Zhang, Z.,Li, X.C. Structural studies of the coiled-coil domain of TRIM75 reveal a tetramer architecture facilitating its E3 ligase complex. Comput Struct Biotechnol J 2022 20 4921 4929 8EBM 36805027 Structure of KLHDC2 substrate binding domain bound to KLHDC2's C-degron mimic 2022-08-31 2023-02-22 Scott, D.C.,King, M.T.,Baek, K.,Gee, C.T.,Kalathur, R.,Li, J.,Purser, N.,Nourse, A.,Chai, S.C.,Vaithiyalingam, S.,Chen, T.,Lee, R.E.,Elledge, S.J.,Kleiger, G.,Schulman, B.A. E3 ligase autoinhibition by C-degron mimicry maintains C-degron substrate fidelity. Mol.Cell 2023 83 770 0 8DPB 36787360 MeaB in complex with the cobalamin-binding domain of its target mutase with GMPPCP bound 2022-07-15 2023-03-01 Vaccaro, F.A.,Born, D.A.,Drennan, C.L. Structure of metallochaperone in complex with the cobalamin-binding domain of its target mutase provides insight into cofactor delivery. Proc.Natl.Acad.Sci.USA 2023 120 0 0 7U5W Crystal Structure Analysis of human Carbonic anhydrase 2 2022-03-02 2023-03-15 Seo, H.-S.,Dhe-Paganon, S. 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J.Gen.Virol. 2023 104 0 0 8GCY 38104184 Co-crystal structure of CBL-B in complex with N-Aryl isoindolin-1-one inhibitor 2023-03-03 2023-03-22 Kimani, S.W.,Perveen, S.,Szewezyk, M.,Zeng, H.,Dong, A.,Li, F.,Ghiabi, P.,Li, Y.,Chau, I.,Arrowsmith, C.H.,Barsyte-Lovejoy, D.,Santhakumar, V.,Vedadi, M.,Halabelian, L. The co-crystal structure of Cbl-b and a small-molecule inhibitor reveals the mechanism of Cbl-b inhibition. Commun Biol 2023 6 1272 1272 7UGB Crystal structure of rat ERK2 complexed with docking peptide from ISG20 2022-03-24 2023-03-29 Torres Robles, J.,Turk, B.E. To be determined To Be Published 0 0 0 0 8G0Q 36883282 Crystal structure of the yeast Ndc80:Nuf2 head region with a bound Dam1 segment 2023-02-01 2023-03-29 Zahm, J.A.,Jenni, S.,Harrison, S.C. Structure of the Ndc80 complex and its interactions at the yeast kinetochore-microtubule interface. Open Biology 2023 13 220378 220378 7UIA 37095076 Crystal structure of BoNT/E receptor binding domain in complex with SV2 and VHH 2022-03-28 2023-04-05 Liu, Z.,Lee, P.G.,Krez, N.,Lam, K.H.,Liu, H.,Przykopanski, A.,Chen, P.,Yao, G.,Zhang, S.,Tremblay, J.M.,Perry, K.,Shoemaker, C.B.,Rummel, A.,Dong, M.,Jin, R. Structural basis for botulinum neurotoxin E recognition of synaptic vesicle protein 2. Nat Commun 2023 14 2338 2338 7UIB 37095076 Crystal structure of BoNT/E receptor binding domain in complex with SV2, VHH, and sialic acid 2022-03-29 2023-04-05 Liu, Z.,Lee, P.G.,Krez, N.,Lam, K.H.,Liu, H.,Przykopanski, A.,Chen, P.,Yao, G.,Zhang, S.,Tremblay, J.M.,Perry, K.,Shoemaker, C.B.,Rummel, A.,Dong, M.,Jin, R. Structural basis for botulinum neurotoxin E recognition of synaptic vesicle protein 2. Nat Commun 2023 14 2338 2338 7UIE 37095076 Crystal structure of HcE-JLE-G6 2022-03-29 2023-04-05 Liu, Z.,Lee, P.G.,Krez, N.,Lam, K.H.,Liu, H.,Przykopanski, A.,Chen, P.,Yao, G.,Zhang, S.,Tremblay, J.M.,Perry, K.,Shoemaker, C.B.,Rummel, A.,Dong, M.,Jin, R. Structural basis for botulinum neurotoxin E recognition of synaptic vesicle protein 2. Nat Commun 2023 14 2338 2338 7UIJ 36976016 Structural studies of B5-OspC complex 2022-03-29 2023-04-05 Rudolph, M.J.,Davis, S.A.,Haque, H.M.E.,Weis, D.D.,Vance, D.J.,Piazza, C.L.,Ejemel, M.,Cavacini, L.,Wang, Y.,Mbow, M.L.,Gilmore, R.D.,Mantis, N.J. Structural Elucidation of a Protective B Cell Epitope on Outer Surface Protein C (OspC) of the Lyme Disease Spirochete, Borreliella burgdorferi. Mbio 2023 14 0 0 7UJ2 36976016 OspC Type B 2022-03-30 2023-04-05 Rudolph, M.J.,Davis, S.A.,Haque, H.M.E.,Weis, D.D.,Vance, D.J.,Piazza, C.L.,Ejemel, M.,Cavacini, L.,Wang, Y.,Mbow, M.L.,Gilmore, R.D.,Mantis, N.J. Structural Elucidation of a Protective B Cell Epitope on Outer Surface Protein C (OspC) of the Lyme Disease Spirochete, Borreliella burgdorferi. Mbio 2023 14 0 0 7UJ6 36976016 Outer Surface Protein C Type K 2022-03-30 2023-04-05 Rudolph, M.J.,Davis, S.A.,Haque, H.M.E.,Weis, D.D.,Vance, D.J.,Piazza, C.L.,Ejemel, M.,Cavacini, L.,Wang, Y.,Mbow, M.L.,Gilmore, R.D.,Mantis, N.J. Structural Elucidation of a Protective B Cell Epitope on Outer Surface Protein C (OspC) of the Lyme Disease Spirochete, Borreliella burgdorferi. Mbio 2023 14 0 0 8FLZ 36961924 HIV-1 gp120 complex with CJF-III-049-S 2022-12-22 2023-04-05 Fritschi, C.J.,Anang, S.,Gong, Z.,Mohammadi, M.,Richard, J.,Bourassa, C.,Severino, K.T.,Richter, H.,Yang, D.,Chen, H.C.,Chiu, T.J.,Seaman, M.S.,Madani, N.,Abrams, C.,Finzi, A.,Hendrickson, W.A.,Sodroski, J.G.,Smith III, A.B. Indoline CD4-mimetic compounds mediate potent and broad HIV-1 inhibition and sensitization to antibody-dependent cellular cytotoxicity. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8FM2 36961924 HIV-1 gp120 complex with CJF-III-289 2022-12-22 2023-04-05 Fritschi, C.J.,Anang, S.,Gong, Z.,Mohammadi, M.,Richard, J.,Bourassa, C.,Severino, K.T.,Richter, H.,Yang, D.,Chen, H.C.,Chiu, T.J.,Seaman, M.S.,Madani, N.,Abrams, C.,Finzi, A.,Hendrickson, W.A.,Sodroski, J.G.,Smith III, A.B. Indoline CD4-mimetic compounds mediate potent and broad HIV-1 inhibition and sensitization to antibody-dependent cellular cytotoxicity. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8FM3 36961924 HIV-1 gp120 complex with CJF-III-288 2022-12-22 2023-04-05 Fritschi, C.J.,Anang, S.,Gong, Z.,Mohammadi, M.,Richard, J.,Bourassa, C.,Severino, K.T.,Richter, H.,Yang, D.,Chen, H.C.,Chiu, T.J.,Seaman, M.S.,Madani, N.,Abrams, C.,Finzi, A.,Hendrickson, W.A.,Sodroski, J.G.,Smith III, A.B. Indoline CD4-mimetic compounds mediate potent and broad HIV-1 inhibition and sensitization to antibody-dependent cellular cytotoxicity. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8FM5 36961924 HIV-1 gp120 complex with DY-III-065 2022-12-22 2023-04-05 Fritschi, C.J.,Anang, S.,Gong, Z.,Mohammadi, M.,Richard, J.,Bourassa, C.,Severino, K.T.,Richter, H.,Yang, D.,Chen, H.C.,Chiu, T.J.,Seaman, M.S.,Madani, N.,Abrams, C.,Finzi, A.,Hendrickson, W.A.,Sodroski, J.G.,Smith III, A.B. Indoline CD4-mimetic compounds mediate potent and broad HIV-1 inhibition and sensitization to antibody-dependent cellular cytotoxicity. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8FM8 36961924 HIV-1 gp120 complex with CJF-IV-046 2022-12-22 2023-04-05 Fritschi, C.J.,Anang, S.,Gong, Z.,Mohammadi, M.,Richard, J.,Bourassa, C.,Severino, K.T.,Richter, H.,Yang, D.,Chen, H.C.,Chiu, T.J.,Seaman, M.S.,Madani, N.,Abrams, C.,Finzi, A.,Hendrickson, W.A.,Sodroski, J.G.,Smith III, A.B. Indoline CD4-mimetic compounds mediate potent and broad HIV-1 inhibition and sensitization to antibody-dependent cellular cytotoxicity. 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Structure and RAF family kinase isoform selectivity of type II RAF inhibitors tovorafenib and naporafenib. J.Biol.Chem. 2023 299 104634 104634 8FGZ 36995121 Crystal structure of mutant Androgen Receptor ligand binding domain L702H/H875Y/F877L with DHT 2022-12-13 2023-04-12 Doamekpor, S.K.,Peng, P.,Xu, R.,Ma, L.,Tong, Y.,Tong, L. A partially open conformation of an androgen receptor ligand-binding domain with drug-resistance mutations. Acta Crystallogr.,Sect.F 2023 79 95 104 8GY0 Agrocybe pediades linalool sunthase (Ap.LS) 2022-09-21 2023-04-12 Rehka, T.,Sharma, D.,Lin, F.,Choong, Y.K.,Lim, C.,Jobichen, C.,Zhang, C. Structural Understanding of Fungal Terpene Synthases for the Formation of Linear or Cyclic Terpene Products. Acs Catalysis 2023 13 4949 4959 8CTP 37217787 Crystal structure of engineered phospholipase D mutant superPLD 2-23 2022-05-16 2023-04-26 Tei, R.,Bagde, S.R.,Fromme, J.C.,Baskin, J.M. Activity-based directed evolution of a membrane editor in mammalian cells. 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Embo Rep. 2023 24 0 0 8G45 37499118 Structure of HDAC6 zinc-finger ubiquitin binding domain in complex with SGC-UBD253 chemical probe 2023-02-08 2023-05-03 Harding, R.J.,Franzoni, I.,Mann, M.K.,Szewczyk, M.M.,Mirabi, B.,Ferreira de Freitas, R.,Owens, D.D.G.,Ackloo, S.,Scheremetjew, A.,Juarez-Ornelas, K.A.,Sanichar, R.,Baker, R.J.,Dank, C.,Brown, P.J.,Barsyte-Lovejoy, D.,Santhakumar, V.,Schapira, M.,Lautens, M.,Arrowsmith, C.H. Discovery and Characterization of a Chemical Probe Targeting the Zinc-Finger Ubiquitin-Binding Domain of HDAC6. J.Med.Chem. 2023 66 10273 10288 8FHX 37344591 Structure of Lettuce aptamer bound to DFHBI-1T 2022-12-15 2023-05-10 Passalacqua, L.F.M.,Banco, M.T.,Moon, J.D.,Li, X.,Jaffrey, S.R.,Ferre-D'Amare, A.R. Intricate 3D architecture of a DNA mimic of GFP. Nature 2023 618 1078 1084 8FHZ 37344591 Structure of Lettuce aptamer bound to DFHO 2022-12-15 2023-05-10 Passalacqua, L.F.M.,Banco, M.T.,Moon, J.D.,Li, X.,Jaffrey, S.R.,Ferre-D'Amare, A.R. Intricate 3D architecture of a DNA mimic of GFP. Nature 2023 618 1078 1084 7TV2 37150290 X-ray crystal structure of HIV-2 CA protein CTD 2022-02-03 2023-05-17 Talledge, N.,Yang, H.,Shi, K.,Coray, R.,Yu, G.,Arndt, W.G.,Meng, S.,Baxter, G.C.,Mendonca, L.M.,Castano-Diez, D.,Aihara, H.,Mansky, L.M.,Zhang, W. HIV-2 Immature Particle Morphology Provides Insights into Gag Lattice Stability and Virus Maturation. J.Mol.Biol. 2023 435 168143 168143 8GIA 37126856 Crystal structure of SARS-CoV-2 (Covid-19) Nsp3 macrodomain in complex with TFMU-ADPr 2023-03-13 2023-05-17 Anmangandla, A.,Jana, S.,Peng, K.,Wallace, S.D.,Bagde, S.R.,Drown, B.S.,Xu, J.,Hergenrother, P.J.,Fromme, J.C.,Lin, H. A Fluorescence Polarization Assay for Macrodomains Facilitates the Identification of Potent Inhibitors of the SARS-CoV-2 Macrodomain. Acs Chem.Biol. 2023 18 1200 1207 8DOC 37279401 Crystal structure of RPE65 in complex with compound 16e and palmitate 2022-07-12 2023-05-24 Bassetto, M.,Zaluski, J.,Li, B.,Zhang, J.,Badiee, M.,Kiser, P.D.,Tochtrop, G.P. Tuning the Metabolic Stability of Visual Cycle Modulators through Modification of an RPE65 Recognition Motif. J.Med.Chem. 2023 66 8140 8158 8FXF 37168870 Crystal structure of the coiled-coil domain of TRIM56 2023-01-24 2023-05-24 Lou, X.,Ma, B.,Zhuang, Y.,Xiao, X.,Minze, L.J.,Xing, J.,Zhang, Z.,Li, X.C. TRIM56 coiled-coil domain structure provides insights into its E3 ligase functions. Comput Struct Biotechnol J 2023 21 2801 2808 7SXP 37257453 G-quadruplex structure formed in the NRAS mRNA with a G8U substitution 2021-11-24 2023-05-31 Balaratnam, S.,Torrey, Z.R.,Calabrese, D.R.,Banco, M.T.,Yazdani, K.,Liang, X.,Fullenkamp, C.R.,Seshadri, S.,Holewinski, R.J.,Andresson, T.,Ferre-D'Amare, A.R.,Incarnato, D.,Schneekloth Jr., J.S. Investigating the NRAS 5' UTR as a target for small molecules. Cell Chem Biol 2023 30 643 0 8ECM 36823301 Crystal Structure Analysis of Acetyl-CoA acetyltransferase from Firmicutes bacterium 2022-09-02 2023-05-31 Mehta, R.S.,Mayers, J.R.,Zhang, Y.,Bhosle, A.,Glasser, N.R.,Nguyen, L.H.,Ma, W.,Bae, S.,Branck, T.,Song, K.,Sebastian, L.,Pacheco, J.A.,Seo, H.S.,Clish, C.,Dhe-Paganon, S.,Ananthakrishnan, A.N.,Franzosa, E.A.,Balskus, E.P.,Chan, A.T.,Huttenhower, C. Gut microbial metabolism of 5-ASA diminishes its clinical efficacy in inflammatory bowel disease. Nat Med 2023 29 700 709 8EBZ 37268708 Crystal Structure of GMPPNP-bound KRAS-G13D mutant at 1.2 Ang resolution 2022-08-31 2023-06-07 Chao, F.A.,Chan, A.H.,Dharmaiah, S.,Schwieters, C.D.,Tran, T.H.,Taylor, T.,Ramakrishnan, N.,Esposito, D.,Nissley, D.V.,McCormick, F.,Simanshu, D.K.,Cornilescu, G. Reduced dynamic complexity allows structure elucidation of an excited state of KRAS G13D . Commun Biol 2023 6 594 594 8EPW 37268708 Crystal Structure of KRAS4b-G13D (GMPPNP-bound) in complex with RAS-binding domain (RBD) of RAF1/CRAF 2022-10-06 2023-06-07 Chao, F.A.,Chan, A.H.,Dharmaiah, S.,Schwieters, C.D.,Tran, T.H.,Taylor, T.,Ramakrishnan, N.,Esposito, D.,Nissley, D.V.,McCormick, F.,Simanshu, D.K.,Cornilescu, G. Reduced dynamic complexity allows structure elucidation of an excited state of KRAS G13D . Commun Biol 2023 6 594 594 7V1A 37369205 Stapled TBS peptide from RIAM bound to talin R7R8 domains 2022-05-11 2023-06-14 Gao, T.,Cho, E.A.,Zhang, P.,Wu, J. Inhibition of talin-induced integrin activation by a double-hit stapled peptide. Structure 2023 31 948 0 8EOO 37395646 Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibodies WRAIR-2063 and WRAIR-2151 2022-10-03 2023-06-14 Jensen, J.L.,Sankhala, R.S.,Dussupt, V.,Bai, H.,Hajduczki, A.,Lal, K.G.,Chang, W.C.,Martinez, E.J.,Peterson, C.E.,Golub, E.S.,Rees, P.A.,Mendez-Rivera, L.,Zemil, M.,Kavusak, E.,Mayer, S.V.,Wieczorek, L.,Kannan, S.,Doranz, B.J.,Davidson, E.,Yang, E.S.,Zhang, Y.,Chen, M.,Choe, M.,Wang, L.,Gromowski, G.D.,Koup, R.A.,Michael, N.L.,Polonis, V.R.,Rolland, M.,Modjarrad, K.,Krebs, S.J.,Joyce, M.G. Targeting the Spike Receptor Binding Domain Class V Cryptic Epitope by an Antibody with Pan-Sarbecovirus Activity. J.Virol. 2023 97 0 0 8DC0 Rat Betaglycan Zona Pellucida Domain (ZPC) in complex with mini monomer TGFb2 (mmTGF-b2-7M2R) 2022-06-15 2023-06-21 Wieteska, L.,Taylor, A.B.,Hinck, A.P. Rat Betaglycan Zona Pellucida Domain (ZPC) in complex with mini monomer TGFb2 (mmTGF-b2-7M2R) To Be Published 0 0 0 0 8E9A 37301907 Crystal structure of AsfvPolX in complex with 10-23 DNAzyme and Mg 2022-08-26 2023-06-21 Cramer, E.R.,Starcovic, S.A.,Avey, R.M.,Kaya, A.I.,Robart, A.R. Structure of a 10-23 deoxyribozyme exhibiting a homodimer conformation. Commun Chem 2023 6 119 119 8SMT 38157856 Crystal structure of antibody WRAIR-2134 in complex with SARS-CoV-2 receptor binding domain 2023-04-26 2023-06-28 Sankhala, R.S.,Dussupt, V.,Chen, W.H.,Bai, H.,Martinez, E.J.,Jensen, J.L.,Rees, P.A.,Hajduczki, A.,Chang, W.C.,Choe, M.,Yan, L.,Sterling, S.L.,Swafford, I.,Kuklis, C.,Soman, S.,King, J.,Corbitt, C.,Zemil, M.,Peterson, C.E.,Mendez-Rivera, L.,Townsley, S.M.,Donofrio, G.C.,Lal, K.G.,Tran, U.,Green, E.C.,Smith, C.,de Val, N.,Laing, E.D.,Broder, C.C.,Currier, J.R.,Gromowski, G.D.,Wieczorek, L.,Rolland, M.,Paquin-Proulx, D.,van Dyk, D.,Britton, Z.,Rajan, S.,Loo, Y.M.,McTamney, P.M.,Esser, M.T.,Polonis, V.R.,Michael, N.L.,Krebs, S.J.,Modjarrad, K.,Joyce, M.G. Antibody targeting of conserved sites of vulnerability on the SARS-CoV-2 spike receptor-binding domain. Structure 2024 32 131 0 7T8Q CRYSTAL STRUCTURE OF T151G CAO1 2021-12-16 2023-07-05 Daruwalla, A.,Kiser, P.D. 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Plos One 2023 18 0 0 8GAR 37338957 Nitrosomonas europaea Cytochrome P460 Arg44Ala 2023-02-23 2023-07-05 Bollmeyer, M.M.,Coleman, R.E.,Majer, S.H.,Ferrao, S.D.,Lancaster, K.M. Cytochrome P460 Cofactor Maturation Proceeds via Peroxide-Dependent Post-translational Modification. J.Am.Chem.Soc. 2023 145 14404 14416 8GJX 37379839 Structure of the human STING receptor bound to 2'3'-cUA 2023-03-16 2023-07-05 Li, Y.,Slavik, K.M.,Toyoda, H.C.,Morehouse, B.R.,de Oliveira Mann, C.C.,Elek, A.,Levy, S.,Wang, Z.,Mears, K.S.,Liu, J.,Kashin, D.,Guo, X.,Mass, T.,Sebe-Pedros, A.,Schwede, F.,Kranzusch, P.J. cGLRs are a diverse family of pattern recognition receptors in innate immunity. Cell 2023 186 3261 0 8GJY 37379839 Structure of a cGAS-like receptor Sp-cGLR1 from S. pistillata 2023-03-16 2023-07-05 Li, Y.,Slavik, K.M.,Toyoda, H.C.,Morehouse, B.R.,de Oliveira Mann, C.C.,Elek, A.,Levy, S.,Wang, Z.,Mears, K.S.,Liu, J.,Kashin, D.,Guo, X.,Mass, T.,Sebe-Pedros, A.,Schwede, F.,Kranzusch, P.J. cGLRs are a diverse family of pattern recognition receptors in innate immunity. Cell 2023 186 3261 0 8SHJ 37996079 Crystal structure of the WD-repeat domain of human WDR91 in complex with MR45279 2023-04-14 2023-07-05 Ahmad, S.,Xu, J.,Feng, J.A.,Hutchinson, A.,Zeng, H.,Ghiabi, P.,Dong, A.,Centrella, P.A.,Clark, M.A.,Guie, M.A.,Guilinger, J.P.,Keefe, A.D.,Zhang, Y.,Cerruti, T.,Cuozzo, J.W.,von Rechenberg, M.,Bolotokova, A.,Li, Y.,Loppnau, P.,Seitova, A.,Li, Y.Y.,Santhakumar, V.,Brown, P.J.,Ackloo, S.,Halabelian, L. Discovery of a First-in-Class Small-Molecule Ligand for WDR91 Using DNA-Encoded Chemical Library Selection Followed by Machine Learning. J.Med.Chem. 2023 66 16051 16061 8T55 37996079 Co-crystal structure of the WD-repeat domain of human WDR91 in complex with MR46654 2023-06-12 2023-07-05 Ahmad, S.,Xu, J.,Feng, J.A.,Hutchinson, A.,Zeng, H.,Ghiabi, P.,Dong, A.,Centrella, P.A.,Clark, M.A.,Guie, M.A.,Guilinger, J.P.,Keefe, A.D.,Zhang, Y.,Cerruti, T.,Cuozzo, J.W.,von Rechenberg, M.,Bolotokova, A.,Li, Y.,Loppnau, P.,Seitova, A.,Li, Y.Y.,Santhakumar, V.,Brown, P.J.,Ackloo, S.,Halabelian, L. Discovery of a First-in-Class Small-Molecule Ligand for WDR91 Using DNA-Encoded Chemical Library Selection Followed by Machine Learning. J.Med.Chem. 2023 66 16051 16061 7TFF 37622331 Crystal structure of human platelet phosphofructokinase-1 mutant- D564N 2022-01-06 2023-07-12 Voronkova, M.A.,Hansen, H.L.,Cooper, M.P.,Miller, J.,Sukumar, N.,Geldenhuys, W.J.,Robart, A.R.,Webb, B.A. Cancer-associated somatic mutations in human phosphofructokinase-1 reveal a critical electrostatic interaction for allosteric regulation of enzyme activity. Biochem.J. 2023 480 1411 1427 8DMP Crystal structure of Legionella pneumophila macrodomain effector MavL 2022-07-08 2023-07-12 Zhang, Z.,Das, C. Structure of Legionella pneumophila macrodomain effector MavL To Be Published 0 0 0 0 8DMQ Crystal structure of Legionella pneumophila macrodomain MavL in complex with ubiquitin vinyl methyl ester 2022-07-08 2023-07-12 Zhang, Z.,Das, C. Structure of Legionella pneumophila macrodomain effector MavL in complex with ubiquitin vinyl methyl ester To Be Published 0 0 0 0 8DMR Legionella macrodomain effector MavL R370A in complex with ADP-ribose 2022-07-08 2023-07-12 Zhang, Z.,Das, C. Structure of ADP-ribose-bound Legionella pneumophila macrodomain effector MavL R370A To Be Published 0 0 0 0 8F6D 37449820 Crystal structure of the CNNM2 CBS-pair domain in complex with ARL15 2022-11-16 2023-07-12 Mahbub, L.,Kozlov, G.,Zong, P.,Lee, E.L.,Tetteh, S.,Nethramangalath, T.,Knorn, C.,Jiang, J.,Shahsavan, A.,Yue, L.,Runnels, L.,Gehring, K. Structural insights into regulation of CNNM-TRPM7 divalent cation uptake by the small GTPase ARL15. Elife 2023 12 0 0 8DOM 37811683 Structure of the N358Y single variant ofserine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP 2022-07-13 2023-07-19 Korasick, D.A.,Owuocha, L.F.,Kandoth, P.K.,Tanner, J.J.,Mitchum, M.G.,Beamer, L.J. Structural and functional analysis of two SHMT8 variants associated with soybean cyst nematode resistance. Febs J. 2024 291 323 337 8GAK 37416832 Crystal Structure of E. coli LptA in complex with Chinavia Ubica Thanatin 2023-02-23 2023-07-19 Huynh, K.,Kibrom, A.,Donald, B.R.,Zhou, P. Discovery, characterization, and redesign of potent antimicrobial thanatin orthologs from Chinavia ubica and Murgantia histrionica targeting E. coli LptA. J Struct Biol X 2023 8 100091 100091 8GAL 37416832 Crystal Structure of the E. coli LptA in complex with Murgantia histrionica Thanatin 2023-02-23 2023-07-19 Huynh, K.,Kibrom, A.,Donald, B.R.,Zhou, P. Discovery, characterization, and redesign of potent antimicrobial thanatin orthologs from Chinavia ubica and Murgantia histrionica targeting E. coli LptA. J Struct Biol X 2023 8 100091 100091 8E5Q 37428793 Schistosoma mansoni (Blood Fluke) Sulfotransferase/CIDD-0150303 Complex 2022-08-22 2023-07-26 Alwan, S.N.,Taylor, A.B.,Rhodes, J.,Tidwell, M.,McHardy, S.F.,LoVerde, P.T. Oxamniquine derivatives overcome Praziquantel treatment limitations for Schistosomiasis. Plos Pathog. 2023 19 0 0 8E5R 37428793 Schistosoma mansoni (Blood Fluke) Sulfotransferase/CIDD-0150610 Complex 2022-08-22 2023-07-26 Alwan, S.N.,Taylor, A.B.,Rhodes, J.,Tidwell, M.,McHardy, S.F.,LoVerde, P.T. Oxamniquine derivatives overcome Praziquantel treatment limitations for Schistosomiasis. Plos Pathog. 2023 19 0 0 8SU0 37449555 Unliganded F96H epi-Isozizaene Synthase 2023-05-11 2023-07-26 Eaton, S.A.,Christianson, D.W. Reprogramming the Cyclization Cascade of epi -Isozizaene Synthase to Generate Alternative Terpene Products. Biochemistry 2023 62 2301 2313 8SU1 37449555 F96H epi-Isozizaene Synthase: complex with 3 Mg2+ and pamidronate 2023-05-11 2023-07-26 Eaton, S.A.,Christianson, D.W. Reprogramming the Cyclization Cascade of epi -Isozizaene Synthase to Generate Alternative Terpene Products. Biochemistry 2023 62 2301 2313 8SU2 37449555 F96H epi-Isozizaene Synthase: complex with 3 Mg2+ and risedronate 2023-05-11 2023-07-26 Eaton, S.A.,Christianson, D.W. Reprogramming the Cyclization Cascade of epi -Isozizaene Synthase to Generate Alternative Terpene Products. Biochemistry 2023 62 2301 2313 8DS8 37938770 Crystal structure of human TNRC18 BAH domain in complex with H3K9me3 peptide 2022-07-21 2023-08-02 Zhao, S.,Lu, J.,Pan, B.,Fan, H.,Byrum, S.D.,Xu, C.,Kim, A.,Guo, Y.,Kanchi, K.L.,Gong, W.,Sun, T.,Storey, A.J.,Burkholder, N.T.,Mackintosh, S.G.,Kuhlers, P.C.,Edmondson, R.D.,Strahl, B.D.,Diao, Y.,Tackett, A.J.,Raab, J.R.,Cai, L.,Song, J.,Wang, G.G. TNRC18 engages H3K9me3 to mediate silencing of endogenous retrotransposons. Nature 2023 623 633 642 8DTD Crystal Structure of FosB from Bacillus cereus with Zinc and Phosphonoformate 2022-07-25 2023-08-02 Travis, S.,Thompson, M.K. Inhibition of FosB by PPF To Be Published 0 0 0 0 8SPI 37578233 Crystal structure of chimeric omicron RBD (strain XBB.1.5) complexed with human ACE2 2023-05-03 2023-08-02 Zhang, W.,Shi, K.,Geng, Q.,Herbst, M.,Wang, M.,Huang, L.,Bu, F.,Liu, B.,Aihara, H.,Li, F. Structural evolution of SARS-CoV-2 omicron in human receptor recognition. J.Virol. 2023 97 0 0 8SH5 37548413 Crystal structure of 3'cap-independent translation enhancers (CITE) from Pea enation mosaic virus RNA 2 (PEMV2) with Fab BL3-6K170A 2023-04-13 2023-08-16 Lewicka, A.,Roman, C.,Jones, S.,Disare, M.,Rice, P.A.,Piccirilli, J.A. Crystal structure of a cap-independent translation enhancer RNA. Nucleic Acids Res. 2023 51 8891 8907 8E4A 37556556 Pseudomonas LpxC in complex with LPC-233 2022-08-17 2023-08-23 Zhao, J.,Cochrane, C.S.,Najeeb, J.,Gooden, D.,Sciandra, C.,Fan, P.,Lemaitre, N.,Newns, K.,Nicholas, R.A.,Guan, Z.,Thaden, J.T.,Fowler Jr., V.G.,Spasojevic, I.,Sebbane, F.,Toone, E.J.,Duncan, C.,Gammans, R.,Zhou, P. Preclinical safety and efficacy characterization of an LpxC inhibitor against Gram-negative pathogens. Sci Transl Med 2023 15 0 0 8STM 37556505 Crystal structure of KRAS-G75A mutant, GDP-bound 2023-05-10 2023-08-23 Yang, M.H.,Tran, T.H.,Hunt, B.,Agnor, R.,Johnson, C.W.,Shui, B.,Waybright, T.J.,Nowak, J.A.,Stephen, A.G.,Simanshu, D.K.,Haigis, K.M. Allosteric Regulation of Switch-II Domain Controls KRAS Oncogenicity. Cancer Res. 2023 83 3176 3183 8STN 37556505 Crystal structure of KRAS-G12D/G75A mutant, GDP-bound 2023-05-10 2023-08-23 Yang, M.H.,Tran, T.H.,Hunt, B.,Agnor, R.,Johnson, C.W.,Shui, B.,Waybright, T.J.,Nowak, J.A.,Stephen, A.G.,Simanshu, D.K.,Haigis, K.M. Allosteric Regulation of Switch-II Domain Controls KRAS Oncogenicity. Cancer Res. 2023 83 3176 3183 8D40 Crystal structure of human CELSR1 EC1-4 2022-06-01 2023-08-30 Tamilselvan, E.,Sotomayor, M. Crystal structure of human CELSR1 EC1-4 to be published 0 0 0 0 8DR9 Crystal structure of human ALDH2 in complex with NAD+ and PEG MME 550 2022-07-20 2023-08-30 Xu, S.Y.,Weng, J.K. Crystal structure of human ALDH2 in complex with NAD+ and PEG MME 550 To be published 0 0 0 0 8EF2 37561630 Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ107-B 2022-09-07 2023-08-30 Sankhala, R.S.,Dussupt, V.,Donofrio, G.,Gromowski, G.D.,De La Barrera, R.A.,Larocca, R.A.,Mendez-Rivera, L.,Lee, A.,Choe, M.,Zaky, W.,Mantus, G.,Jensen, J.L.,Chen, W.H.,Gohain, N.,Bai, H.,McCracken, M.K.,Mason, R.D.,Leggat, D.,Slike, B.M.,Tran, U.,Jian, N.,Abbink, P.,Peterson, R.,Mendes, E.A.,Freitas de Oliveira Franca, R.,Calvet, G.A.,Bispo de Filippis, A.M.,McDermott, A.,Roederer, M.,Hernandez, M.,Albertus, A.,Davidson, E.,Doranz, B.J.,Rolland, M.,Robb, M.L.,Lynch, R.M.,Barouch, D.H.,Jarman, R.G.,Thomas, S.J.,Modjarrad, K.,Michael, N.L.,Krebs, S.J.,Joyce, M.G. Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes. Cell Rep 2023 42 112942 112942 8FCZ 37626045 Crystal structure of ground-state rhodopsin in complex with a nanobody 2022-12-01 2023-08-30 Wu, A.,Salom, D.,Hong, J.D.,Tworak, A.,Watanabe, K.,Pardon, E.,Steyaert, J.,Kandori, H.,Katayama, K.,Kiser, P.D.,Palczewski, K. Structural basis for the allosteric modulation of rhodopsin by nanobody binding to its extracellular domain. Nat Commun 2023 14 5209 5209 8FD0 37626045 Crystal structure of bovine rod opsin in complex with a nanobody 2022-12-01 2023-08-30 Wu, A.,Salom, D.,Hong, J.D.,Tworak, A.,Watanabe, K.,Pardon, E.,Steyaert, J.,Kandori, H.,Katayama, K.,Kiser, P.D.,Palczewski, K. Structural basis for the allosteric modulation of rhodopsin by nanobody binding to its extracellular domain. Nat Commun 2023 14 5209 5209 8FD1 37626045 Crystal structure of photoactivated rhodopsin in complex with a nanobody 2022-12-01 2023-08-30 Wu, A.,Salom, D.,Hong, J.D.,Tworak, A.,Watanabe, K.,Pardon, E.,Steyaert, J.,Kandori, H.,Katayama, K.,Kiser, P.D.,Palczewski, K. Structural basis for the allosteric modulation of rhodopsin by nanobody binding to its extracellular domain. Nat Commun 2023 14 5209 5209 8SZT 37624144 Structure of Kdac1 from Acinetobacter baumannii 2023-05-30 2023-09-06 Watson, P.R.,Christianson, D.W. Structure and Function of Kdac1, a Class II Deacetylase from the Multidrug-Resistant Pathogen Acinetobacter baumannii . Biochemistry 2023 62 2689 2699 8CAF 37653169 N8C_Fab3b in complex with NEDD8-CUL1(WHB) 2023-01-24 2023-09-13 Henneberg, L.T.,Singh, J.,Duda, D.M.,Baek, K.,Yanishevski, D.,Murray, P.J.,Mann, M.,Sidhu, S.S.,Schulman, B.A. Activity-based profiling of cullin-RING E3 networks by conformation-specific probes. Nat.Chem.Biol. 2023 19 1513 1523 8EFW 37877948 Structure of SdeA DUB Domain disulfide crosslinked with Ubiquitin 2022-09-09 2023-09-20 Negron Teron, K.I.,Das, C. Cocrystallization of ubiquitin-deubiquitinase complexes through disulfide linkage. Acta Crystallogr D Struct Biol 2023 79 1044 1055 8EJO 37744032 Crystal structure of the homeodomain of Platypus sDUX in complex with DNA 2022-09-18 2023-09-20 Bosnakovski, D.,Toso, E.A.,Ener, E.T.,Gearhart, M.D.,Yin, L.,Luttmann, F.F.,Magli, A.,Shi, K.,Kim, J.,Aihara, H.,Kyba, M. Antagonism among DUX family members evolved from an ancestral toxic single homeodomain protein. Iscience 2023 26 107823 107823 8FR3 37681945 E. coli EF-Tu in complex with KKL-55 2023-01-06 2023-09-20 Marathe, N.,Nguyen, H.A.,Alumasa, J.N.,Kuzmishin Nagy, A.B.,Vazquez, M.,Dunham, C.M.,Keiler, K.C. Antibiotic that inhibits trans -translation blocks binding of EF-Tu to tmRNA but not to tRNA. Mbio 2023 14 0 0 8DSW Crystal structure of EGFR kinase domain, Exon20 Insertion FQEA mutant 2022-07-23 2023-09-27 Park, E.,Eck, M.J. Structural basis for oncogenic activation of the epidermal growth factor receptor by the InsFQEA exon 20 insertion To Be Published 0 0 0 0 8T0P 37983946 Structure of Cse4 bound to Ame1 and Okp1 2023-06-01 2023-09-27 Deng, S.,Cai, J.,Harrison, S.C.,Zhou, H.,Hinshaw, S.M. Recognition of centromere-specific histone Cse4 by the inner kinetochore Okp1-Ame1 complex. Embo Rep. 2023 24 0 0 8EBK Crystal Structure Analysis of xHDMX in complex with the stapled peptide PROTAC analog 2022-08-31 2023-10-04 Seo, H.-S.,Dhe-Paganon, S. Crystal Structure Analysis of xHDMX in complex with the stapled peptide PROTAC analog To Be Published 0 0 0 0 8GDM 37713257 Crystal structure of human cellular retinol binding protein 1 in complex with {[3-(diphenylmethyl)-1,2,4-oxadiazol-5-yl]methyl}(methyl)[1-(thiophen-2-yl)ethyl]amine 2023-03-06 2023-10-04 Plau, J.,Morgan, C.E.,Fedorov, Y.,Banerjee, S.,Adams, D.J.,Blaner, W.S.,Yu, E.W.,Golczak, M. Discovery of Nonretinoid Inhibitors of CRBP1: Structural and Dynamic Insights for Ligand-Binding Mechanisms. Acs Chem.Biol. 2023 18 2309 2323 8G63 37827156 Ralimetinib (LY2228820) in complex with wild type EGFR 2023-02-14 2023-10-11 Bhattacharjee, D.,Bakar, J.,Chitnis, S.P.,Sausville, E.L.,Ashtekar, K.D.,Mendelson, B.E.,Long, K.,Smith, J.C.,Heppner, D.E.,Sheltzer, J.M. Inhibition of a lower potency target drives the anticancer activity of a clinical p38 inhibitor. Cell Chem Biol 2023 30 1211 0 8GEU 37713257 Crystal structure of human cellular retinol binding protein 1 in complex with methyl({3-[1-(4-methylphenyl)cyclopentyl]-1,2,4-oxadiazol-5-yl}methyl)[(1-methylpyrazol-4-yl)methyl]amine 2023-03-07 2023-10-11 Plau, J.,Morgan, C.E.,Fedorov, Y.,Banerjee, S.,Adams, D.J.,Blaner, W.S.,Yu, E.W.,Golczak, M. Discovery of Nonretinoid Inhibitors of CRBP1: Structural and Dynamic Insights for Ligand-Binding Mechanisms. Acs Chem.Biol. 2023 18 2309 2323 8SM5 37776275 Crystal Structure of BHRF1 from Epstein Barr Virus in complex with BID BH3 peptide 2023-04-25 2023-10-11 Wyatt, S.,Glover, K.,Dasanna, S.,Lewison, M.,Gonzalez-Garcia, M.,Colbert, C.L.,Sinha, S.C. Epstein-Barr Virus Encoded BCL2, BHRF1, Downregulates Autophagy by Noncanonical Binding of BECN1. Biochemistry 2023 62 2934 2951 8EME EGFR(T790M/V948R) in complex with ZNL-0056 2022-09-27 2023-10-18 Li, Z.,Jiang, J.,Ficarro, S.B.,Beyett, T.S.,To, C.,Tavares, I.,Zhu, Y.,Li, J.,Eck, M.J.,Janne, P.A.,Marto, J.A.,Zhang, T.,Che, J.,Gray, N.S. Molecular Bidents with Two Electrophilic Warheads as a New Pharmacological Modality Acs Cent.Sci. 2024 0 0 0 8G19 37804505 Crystal structure of monoreactive 4C05 human Fab 2023-02-01 2023-10-18 Borowska, M.T.,Boughter, C.T.,Bunker, J.J.,Guthmiller, J.J.,Wilson, P.C.,Roux, B.,Bendelac, A.,Adams, E.J. Biochemical and biophysical characterization of natural polyreactivity in antibodies. Cell Rep 2023 42 113190 113190 8G1C 37804505 Crystal structure of polyreactive 3B03 human Fab 2023-02-01 2023-10-18 Borowska, M.T.,Boughter, C.T.,Bunker, J.J.,Guthmiller, J.J.,Wilson, P.C.,Roux, B.,Bendelac, A.,Adams, E.J. Biochemical and biophysical characterization of natural polyreactivity in antibodies. Cell Rep 2023 42 113190 113190 8F1H EGFR kinase in complex with TAS6417 (CLN-081) 2022-11-05 2023-11-08 Beyett, T.S.,Eck, M.J. EGFR kinase in complex with TAS6417 (CLN-081) To be published 0 0 0 0 8F1X EGFR kinase in complex with mobocertinib (TAK-788) 2022-11-06 2023-11-08 Beyett, T.S.,Eck, M.J. EGFR kinase in complex with mobocertinib (TAK-788) To be published 0 0 0 0 8F1Z EGFR kinase in complex with Bayer #33 2022-11-06 2023-11-08 Beyett, T.S.,Eck, M.J. EGFR kinase in complex with Bayer #33 To be published 0 0 0 0 8T1Q 37967558 Crystal structure of human CPSF73 catalytic segment in complex with compound 1 2023-06-02 2023-11-08 Tao, Y.,Budhipramono, A.,Huang, J.,Fang, M.,Xie, S.,Kim, J.,Khivansara, V.,Dominski, Z.,Tong, L.,De Brabander, J.K.,Nijhawan, D. Anticancer benzoxaboroles block pre-mRNA processing by directly inhibiting CPSF3. Cell Chem Biol 2024 31 139 0 8T1R 37967558 Crystal structure of human CPSF73 catalytic segment in complex with compound 2 2023-06-02 2023-11-08 Tao, Y.,Budhipramono, A.,Huang, J.,Fang, M.,Xie, S.,Kim, J.,Khivansara, V.,Dominski, Z.,Tong, L.,De Brabander, J.K.,Nijhawan, D. Anticancer benzoxaboroles block pre-mRNA processing by directly inhibiting CPSF3. Cell Chem Biol 2024 31 139 0 8TFI 37883434 tRNA 2'-phosphotransferase (Tpt1) from Pyrococcus horikoshii 2023-07-11 2023-11-08 Jacewicz, A.,Dantuluri, S.,Shuman, S. Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8TFX 37883434 tRNA 2'-phosphotransferase (Tpt1) from Pyrococcus horikoshii in complex with 2',5'-ADP 2023-07-12 2023-11-08 Jacewicz, A.,Dantuluri, S.,Shuman, S. Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8TG3 37883434 tRNA 2'-phosphotransferase (Tpt1) from Aeropyrum pernix in complex with ADP-ribose-1"" -phosphate 2023-07-12 2023-11-08 Jacewicz, A.,Dantuluri, S.,Shuman, S. Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8TG4 37883434 tRNA 2'-phosphotransferase (Tpt1) from Aeropyrum pernix in complex with ADP-ribose-2""-phosphate and 2'-OH RNA 2023-07-12 2023-11-08 Jacewicz, A.,Dantuluri, S.,Shuman, S. Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8TG6 37883434 tRNA 2'-phosphotransferase (Tpt1) from Aeropyrum pernix in complex with sulfate anions 2023-07-12 2023-11-08 Jacewicz, A.,Dantuluri, S.,Shuman, S. Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD. Proc.Natl.Acad.Sci.USA 2023 120 0 0 8F7H 38308044 The condensation domain of surfactin A synthetase C variant 18b in space group P212121 2022-11-18 2023-11-22 Folger, I.B.,Frota, N.F.,Pistofidis, A.,Niquille, D.L.,Hansen, D.A.,Schmeing, T.M.,Hilvert, D. High-throughput reprogramming of an NRPS condensation domain. Nat.Chem.Biol. 2024 0 0 0 8T7F 37945533 Structure of the S1 variant of Fab F1 2023-06-20 2023-11-22 Bruce, H.A.,Singer, A.U.,Filippova, E.V.,Blazer, L.L.,Adams, J.J.,Enderle, L.,Ben-David, M.,Radley, E.H.,Mao, D.Y.L.,Pau, V.,Orlicky, S.,Sicheri, F.,Kurinov, I.,Atwell, S.,Kossiakoff, A.A.,Sidhu, S.S. Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes. Protein Sci. 2024 33 0 0 8T7G 37945533 Structure of the CK variant of Fab F1 (FabC-F1) 2023-06-20 2023-11-22 Bruce, H.A.,Singer, A.U.,Filippova, E.V.,Blazer, L.L.,Adams, J.J.,Enderle, L.,Ben-David, M.,Radley, E.H.,Mao, D.Y.L.,Pau, V.,Orlicky, S.,Sicheri, F.,Kurinov, I.,Atwell, S.,Kossiakoff, A.A.,Sidhu, S.S. Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes. Protein Sci. 2024 33 0 0 8T7I 37945533 Structure of the S1CE variant of Fab F1 (FabS1CE-F1) 2023-06-20 2023-11-22 Bruce, H.A.,Singer, A.U.,Filippova, E.V.,Blazer, L.L.,Adams, J.J.,Enderle, L.,Ben-David, M.,Radley, E.H.,Mao, D.Y.L.,Pau, V.,Orlicky, S.,Sicheri, F.,Kurinov, I.,Atwell, S.,Kossiakoff, A.A.,Sidhu, S.S. Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes. Protein Sci. 2024 33 0 0 8TRS 37945533 Structure of the EphA2 CRD bound to FabS1CE_C1, trigonal form 2023-08-10 2023-11-22 Bruce, H.A.,Singer, A.U.,Filippova, E.V.,Blazer, L.L.,Adams, J.J.,Enderle, L.,Ben-David, M.,Radley, E.H.,Mao, D.Y.L.,Pau, V.,Orlicky, S.,Sicheri, F.,Kurinov, I.,Atwell, S.,Kossiakoff, A.A.,Sidhu, S.S. Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes. Protein Sci. 2024 33 0 0 8TRT 37945533 Structure of the EphA2 CRD bound to FabS1CE_C1, monoclinic form 2023-08-10 2023-11-22 Bruce, H.A.,Singer, A.U.,Filippova, E.V.,Blazer, L.L.,Adams, J.J.,Enderle, L.,Ben-David, M.,Radley, E.H.,Mao, D.Y.L.,Pau, V.,Orlicky, S.,Sicheri, F.,Kurinov, I.,Atwell, S.,Kossiakoff, A.A.,Sidhu, S.S. Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes. Protein Sci. 2024 33 0 0 8TS5 37945533 Structure of the apo FabS1C_C1 2023-08-10 2023-11-22 Bruce, H.A.,Singer, A.U.,Filippova, E.V.,Blazer, L.L.,Adams, J.J.,Enderle, L.,Ben-David, M.,Radley, E.H.,Mao, D.Y.L.,Pau, V.,Orlicky, S.,Sicheri, F.,Kurinov, I.,Atwell, S.,Kossiakoff, A.A.,Sidhu, S.S. Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes. Protein Sci. 2024 33 0 0 8UWP Crystal structure of SETDB1 Tudor domain in complex with MR46747 2023-11-07 2023-11-22 Shrestha, S.,Beldar, S.,Dong, A.,Ackloo, S.,Brown, P.J.,Arrowsmith, C.H.,Edwards, A.M.,Halabelian, L.,Structural Genomics Consortium (SGC) Crystal structure of SETDB1 Tudor domain in complex with MR46747 To be published 0 0 0 0 8STR 37861472 Crystal Structure of HIV-1 Reverse Transcriptase (Y181C) varient in Complex with 5-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)-4-fluorophenoxy)-7-fluoro-2-naphthonitrile (JLJ636), a non-nucleoside inhibitor 2023-05-11 2023-11-29 Hollander, K.,Chan, A.H.,Frey, K.M.,Hunker, O.,Ippolito, J.A.,Spasov, K.A.,Yeh, Y.J.,Jorgensen, W.L.,Ho, Y.C.,Anderson, K.S. Exploring novel HIV-1 reverse transcriptase inhibitors with drug-resistant mutants: A double mutant surprise. Protein Sci. 2023 32 0 0 8T58 37945533 Structure of VHH-Fab complex with engineered FNQIKG elbow region 2023-06-12 2023-11-29 Bruce, H.A.,Singer, A.U.,Filippova, E.V.,Blazer, L.L.,Adams, J.J.,Enderle, L.,Ben-David, M.,Radley, E.H.,Mao, D.Y.L.,Pau, V.,Orlicky, S.,Sicheri, F.,Kurinov, I.,Atwell, S.,Kossiakoff, A.A.,Sidhu, S.S. Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes. Protein Sci. 2024 33 0 0 8T6I 37945533 Structure of VHH-Fab complex with engineered Crystal Kappa region 2023-06-16 2023-11-29 Bruce, H.A.,Singer, A.U.,Filippova, E.V.,Blazer, L.L.,Adams, J.J.,Enderle, L.,Ben-David, M.,Radley, E.H.,Mao, D.Y.L.,Pau, V.,Orlicky, S.,Sicheri, F.,Kurinov, I.,Atwell, S.,Kossiakoff, A.A.,Sidhu, S.S. Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes. Protein Sci. 2024 33 0 0 8T82 37972334 Racemic mixture of amyloid beta segment 35-MVGGVV-40 forms heterochiral rippled beta-sheet, includes pentafluoropropionic acid 2023-06-21 2023-11-29 Hazari, A.,Sawaya, M.R.,Sajimon, M.,Vlahakis, N.,Rodriguez, J.,Eisenberg, D.,Raskatov, J.A. Racemic Peptides from Amyloid beta and Amylin Form Rippled beta-Sheets Rather Than Pleated beta-Sheets. J.Am.Chem.Soc. 2023 145 25917 25926 8T84 37972334 Racemic mixture of amyloid beta segment 35-MVGGVV-40 forms heterochiral rippled beta-sheet, includes hexafluoroisopropanol 2023-06-21 2023-11-29 Hazari, A.,Sawaya, M.R.,Sajimon, M.,Vlahakis, N.,Rodriguez, J.,Eisenberg, D.,Raskatov, J.A. Racemic Peptides from Amyloid beta and Amylin Form Rippled beta-Sheets Rather Than Pleated beta-Sheets. J.Am.Chem.Soc. 2023 145 25917 25926 8T86 37972334 Racemic mixture of amylin segment 25-AILSS-29 forms heterochiral rippled beta-sheet 2023-06-21 2023-11-29 Hazari, A.,Sawaya, M.R.,Sajimon, M.,Vlahakis, N.,Rodriguez, J.,Eisenberg, D.,Raskatov, J.A. Racemic Peptides from Amyloid beta and Amylin Form Rippled beta-Sheets Rather Than Pleated beta-Sheets. J.Am.Chem.Soc. 2023 145 25917 25926 8T89 37972334 Racemic mixture of amyloid beta segment 16-KLVFFA-21 forms heterochiral rippled beta-sheet 2023-06-22 2023-11-29 Hazari, A.,Sawaya, M.R.,Sajimon, M.,Vlahakis, N.,Rodriguez, J.,Eisenberg, D.,Raskatov, J.A. Racemic Peptides from Amyloid beta and Amylin Form Rippled beta-Sheets Rather Than Pleated beta-Sheets. 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Nature 2024 625 797 804 8T66 38200316 cA6 bound Cam1 2023-06-15 2024-01-10 Baca, C.F.,Yu, Y.,Rostol, J.T.,Majumder, P.,Patel, D.J.,Marraffini, L.A. The CRISPR effector Cam1 mediates membrane depolarization for phage defence. Nature 2024 625 797 804 8TBW 38113889 Human Class I MHC HLA-A2 in complex with sorting nexin 24 (127-135) peptide KLSHQPVLL 2023-06-29 2024-01-10 Mikhaylov, V.,Brambley, C.A.,Keller, G.L.J.,Arbuiso, A.G.,Weiss, L.I.,Baker, B.M.,Levine, A.J. Accurate modeling of peptide-MHC structures with AlphaFold. Structure 2024 32 228 0 8U9G 38113889 Human Class I MHC HLA-A2 bound to sorting nexin 24 (127-135) neoantigen KLSHQLVLL 2023-09-19 2024-01-10 Mikhaylov, V.,Brambley, C.A.,Keller, G.L.J.,Arbuiso, A.G.,Weiss, L.I.,Baker, B.M.,Levine, A.J. Accurate modeling of peptide-MHC structures with AlphaFold. Structure 2024 32 228 0 8UC9 38156904 SOS2 co-crystal structure with fragment bound (compound 9) 2023-09-26 2024-01-10 Smith, C.R.,Chen, D.,Christensen, J.G.,Coulombe, R.,Fethiere, J.,Gunn, R.J.,Hollander, J.,Jones, B.,Ketcham, J.M.,Khare, S.,Kuehler, J.,Lawson, J.D.,Marx, M.A.,Olson, P.,Pearson, K.E.,Ren, C.,Tsagris, D.,Ulaganathan, T.,Van't Veer, I.,Wang, X.,Ivetac, A. Discovery of Five SOS2 Fragment Hits with Binding Modes Determined by SOS2 X-Ray Cocrystallography. J.Med.Chem. 2024 67 774 781 8UF2 38156904 Apo SOS2 crystal structure in P1 space group 2023-10-03 2024-01-10 Smith, C.R.,Chen, D.,Christensen, J.G.,Coulombe, R.,Fethiere, J.,Gunn, R.J.,Hollander, J.,Jones, B.,Ketcham, J.M.,Khare, S.,Kuehler, J.,Lawson, J.D.,Marx, M.A.,Olson, P.,Pearson, K.E.,Ren, C.,Tsagris, D.,Ulaganathan, T.,Van't Veer, I.,Wang, X.,Ivetac, A. Discovery of Five SOS2 Fragment Hits with Binding Modes Determined by SOS2 X-Ray Cocrystallography. J.Med.Chem. 2024 67 774 781 8UH0 38156904 SOS2 co-crystal structure with fragment bound (compound 10) 2023-10-06 2024-01-10 Smith, C.R.,Chen, D.,Christensen, J.G.,Coulombe, R.,Fethiere, J.,Gunn, R.J.,Hollander, J.,Jones, B.,Ketcham, J.M.,Khare, S.,Kuehler, J.,Lawson, J.D.,Marx, M.A.,Olson, P.,Pearson, K.E.,Ren, C.,Tsagris, D.,Ulaganathan, T.,Van't Veer, I.,Wang, X.,Ivetac, A. Discovery of Five SOS2 Fragment Hits with Binding Modes Determined by SOS2 X-Ray Cocrystallography. J.Med.Chem. 2024 67 774 781 8DQD 38019455 Structure of the Campylobacter concisus glycosyltransferase PglA 2022-07-18 2024-01-17 Vuksanovic, N.,Clasman, J.R.,Imperiali, B.,Allen, K.N. Specificity determinants revealed by the structure of glycosyltransferase Campylobacter concisus PglA. Protein Sci. 2024 33 0 0 8DVW 38019455 Structure of the Campylobacter concisus glycosyltransferase PglA R203Q 2022-07-30 2024-01-17 Vuksanovic, N.,Clasman, J.R.,Imperiali, B.,Allen, K.N. 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Protein Sci. 2024 33 0 0 8FHY 38172512 Crystal structure of the SARS-CoV-2 receptor binding domain in complex with neutralizing antibody WRAIR-5021 2022-12-15 2024-01-17 Sankhala, R.S.,Lal, K.G.,Jensen, J.L.,Dussupt, V.,Mendez-Rivera, L.,Bai, H.,Wieczorek, L.,Mayer, S.V.,Zemil, M.,Wagner, D.A.,Townsley, S.M.,Hajduczki, A.,Chang, W.C.,Chen, W.H.,Donofrio, G.C.,Jian, N.,King, H.A.D.,Lorang, C.G.,Martinez, E.J.,Rees, P.A.,Peterson, C.E.,Schmidt, F.,Hart, T.J.,Duso, D.K.,Kummer, L.W.,Casey, S.P.,Williams, J.K.,Kannan, S.,Slike, B.M.,Smith, L.,Swafford, I.,Thomas, P.V.,Tran, U.,Currier, J.R.,Bolton, D.L.,Davidson, E.,Doranz, B.J.,Hatziioannou, T.,Bieniasz, P.D.,Paquin-Proulx, D.,Reiley, W.W.,Rolland, M.,Sullivan, N.J.,Vasan, S.,Collins, N.D.,Modjarrad, K.,Gromowski, G.D.,Polonis, V.R.,Michael, N.L.,Krebs, S.J.,Joyce, M.G. Diverse array of neutralizing antibodies elicited upon Spike Ferritin Nanoparticle vaccination in rhesus macaques. 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Nat Commun 2024 15 200 200 8T1M 38451205 Novel Domain of Unknown Function Solved with AlphaFold 2023-06-02 2024-01-17 Miller, J.E.,Agdanowski, M.P.,Dolinsky, J.L.,Sawaya, M.R.,Cascio, D.,Rodriguez, J.A.,Yeates, T.O. AlphaFold-assisted structure determination of a bacterial protein of unknown function using X-ray and electron crystallography. Acta Crystallogr D Struct Biol 2024 80 270 278 8T85 37949227 Structure of RssB bound to beryllofluoride 2023-06-21 2024-01-17 Brugger, C.,Schwartz, J.,Novick, S.,Tong, S.,Hoskins, J.R.,Majdalani, N.,Kim, R.,Filipovski, M.,Wickner, S.,Gottesman, S.,Griffin, P.R.,Deaconescu, A.M. Structure of phosphorylated-like RssB, the adaptor delivering sigma s to the ClpXP proteolytic machinery, reveals an interface switch for activation. J.Biol.Chem. 2023 299 105440 105440 8TBV 38113889 Human Class I MHC HLA-A2 in complex with sorting nexin 24 (127-135) neoantigen KLSHQLVLL 2023-06-29 2024-01-17 Mikhaylov, V.,Brambley, C.A.,Keller, G.L.J.,Arbuiso, A.G.,Weiss, L.I.,Baker, B.M.,Levine, A.J. Accurate modeling of peptide-MHC structures with AlphaFold. Structure 2024 32 228 0 8GDY 38358135 Crystal structure of the human PDI first domain with 9 mutations 2023-03-06 2024-01-24 Banayan, N.E.,Loughlin, B.J.,Singh, S.,Forouhar, F.,Lu, G.,Wong, K.H.,Neky, M.,Hunt, H.S.,Bateman Jr., L.B.,Tamez, A.,Handelman, S.K.,Price, W.N.,Hunt, J.F. Systematic enhancement of protein crystallization efficiency by bulk lysine-to-arginine (KR) substitution. Protein Sci. 2024 33 0 0 8DTS X-ray crystal structure of AFSSFN from chaperone DNAJB8. 2022-07-26 2024-01-31 Boyer, D.R.,Ryder, B.,Sawaya, M.R.,Joachimiak, L.A. X-ray crystal structure of peptide AFSSFN from chaperone DNAJB8. To Be Published 0 0 0 0 8FM1 38321146 Structure of CBASS Cap5 from Pseudomonas syringae in the absence of a ligand (apo form dimer) 2022-12-22 2024-02-07 Rechkoblit, O.,Sciaky, D.,Kreitler, D.F.,Buku, A.,Kottur, J.,Aggarwal, A.K. Activation of CBASS Cap5 endonuclease immune effector by cyclic nucleotides. Nat.Struct.Mol.Biol. 2024 0 0 0 8U5M 38252624 Structure of Sts-1 HP domain with rebamipide 2023-09-12 2024-02-07 Aziz, F.,Reddy, K.,Fernandez Vega, V.,Dey, R.,Hicks, K.A.,Rao, S.,Jordan, L.O.,Smith, E.,Shumate, J.,Scampavia, L.,Carpino, N.,Spicer, T.P.,French, J.B. Rebamipide and Derivatives are Potent, Selective Inhibitors of Histidine Phosphatase Activity of the Suppressor of T Cell Receptor Signaling Proteins. J.Med.Chem. 2024 67 1949 1960 8U7E 38252624 Structure of Sts-1 HP domain with rebamipide derivative 2023-09-15 2024-02-07 Aziz, F.,Reddy, K.,Fernandez Vega, V.,Dey, R.,Hicks, K.A.,Rao, S.,Jordan, L.O.,Smith, E.,Shumate, J.,Scampavia, L.,Carpino, N.,Spicer, T.P.,French, J.B. 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A unique binding pocket induced by a noncanonical SAH mimic to develop potent and selective PRMT inhibitors. Acta Pharm Sin B 2023 13 4893 4905 8UIV 38104959 H47Q NicC with bound FAD 2023-10-10 2024-02-21 Turlington, Z.R.,Vaz Ferreira de Macedo, S.,Perry, K.,Belsky, S.L.,Faust, J.A.,Snider, M.J.,Hicks, K.A. Ligand bound structure of a 6-hydroxynicotinic acid 3-monooxygenase provides mechanistic insights. Arch.Biochem.Biophys. 2024 752 109859 109859 8FMU Crystal structure of human Brachyury G177D variant in complex with SJF-4601 2022-12-24 2024-02-28 Chase, D.,Bebenek, A.,Nie, P.,Jaime-Figueroa, S.,Butrin, A.,Castro, D.,Linhares, B.,Crews, C. Discovery and Development of the First Selective Brachyury Degrader To Be Published 0 0 0 0 8CX8 Stx2A1-BTB13086 2022-05-20 2024-03-06 Rudolph, M.J.,Li, X.P. Stx2A1-BTB13086 To Be Published 0 0 0 0 8SP2 38408229 Crystal structure of metformin hydrolase (MfmAB) from Pseudomonas mendocina sp. MET-2 apo form 2023-05-01 2024-03-06 Tassoulas, L.J.,Rankin, J.A.,Elias, M.H.,Wackett, L.P. Dinickel enzyme evolved to metabolize the pharmaceutical metformin and its implications for wastewater and human microbiomes. Proc.Natl.Acad.Sci.USA 2024 121 0 0 8TCW 38411104 Structure of PYCR1 complexed with 2-methyl-3-(2-oxoimidazolidin-1-yl)benzoic acid 2023-07-02 2024-03-06 Meeks, K.R.,Ji, J.,Protopopov, M.V.,Tarkhanova, O.O.,Moroz, Y.S.,Tanner, J.J. Novel Fragment Inhibitors of PYCR1 from Docking-Guided X-ray Crystallography. J.Chem.Inf.Model. 2024 64 1704 1718 8TCY 38411104 Structure of PYCR1 complexed with 7-fluoro-2-oxo-1,2,3,4-tetrahydroquinoline-6-carboxylic acid 2023-07-02 2024-03-06 Meeks, K.R.,Ji, J.,Protopopov, M.V.,Tarkhanova, O.O.,Moroz, Y.S.,Tanner, J.J. Novel Fragment Inhibitors of PYCR1 from Docking-Guided X-ray Crystallography. 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J Ovarian Res 2024 17 41 41 8VRS 38374055 Mucin 16 peptide fused to MBP in complex with 4H11-scFv antibody 2024-01-22 2024-04-03 Lee, K.,Perry, K.,Xu, M.,Veillard, I.,Kumar, R.,Rao, T.D.,Rueda, B.R.,Spriggs, D.R.,Yeku, O.O. Structural basis for antibody recognition of the proximal MUC16 ectodomain. J Ovarian Res 2024 17 41 41 8FY0 38548768 E3:PROTAC:target ternary complex structure (VCB/753b/BCL-xL) 2023-01-25 2024-04-10 Nayak, D.,Lv, D.,Yuan, Y.,Zhang, P.,Hu, W.,Nayak, A.,Ruben, E.A.,Lv, Z.,Sung, P.,Hromas, R.,Zheng, G.,Zhou, D.,Olsen, S.K. Development and crystal structures of a potent second-generation dual degrader of BCL-2 and BCL-xL. Nat Commun 2024 15 2743 2743 8FY1 38548768 E3:PROTAC:target ternary complex structure (VCB/753b/BCL-2) 2023-01-25 2024-04-10 Nayak, D.,Lv, D.,Yuan, Y.,Zhang, P.,Hu, W.,Nayak, A.,Ruben, E.A.,Lv, Z.,Sung, P.,Hromas, R.,Zheng, G.,Zhou, D.,Olsen, S.K. Development and crystal structures of a potent second-generation dual degrader of BCL-2 and BCL-xL. Nat Commun 2024 15 2743 2743 8FY2 38548768 E3:PROTAC:target ternary complex structure (VCB/WH244/BCL-2) 2023-01-25 2024-04-10 Nayak, D.,Lv, D.,Yuan, Y.,Zhang, P.,Hu, W.,Nayak, A.,Ruben, E.A.,Lv, Z.,Sung, P.,Hromas, R.,Zheng, G.,Zhou, D.,Olsen, S.K. Development and crystal structures of a potent second-generation dual degrader of BCL-2 and BCL-xL. Nat Commun 2024 15 2743 2743 8UTA 38565535 yjdF riboswitch from R. gauvreauii in complex with proflavine bound to Fab BL3-6 S97N 2023-10-30 2024-04-10 Krochmal, D.,Roman, C.,Lewicka, A.,Shao, Y.,Piccirilli, J.A. Structural basis for promiscuity in ligand recognition by yjdF riboswitch. Cell Discov 2024 10 37 37 8F2X Crystal structure of antibody WRAIR-2123 in complex with SARS-CoV-2 receptor binding domain 2022-11-08 2024-04-17 Sankhala, R.S.,Jensen, J.,Modjarrad, K.,Nelson, M.,Joyce, M.G. Antibody Targeting of Conserved Sites of Vulnerability on the SARS-CoV-2 Spike Receptor-Binding Domain To Be Published 0 0 0 0 8SIC Crystal structure of Epstein-Barr virus glycoprotein 350 (gp350) in complex with Cy137C02, a monoclonal antibody isolated from macaques immunized with a gp350 nanoparticle vaccine 2023-04-14 2024-04-17 Joyce, M.G.,Jensen, J.L.,Chen, W.H.,Kanekiyo, M. Crystal structure of Epstein-Barr virus glycoprotein 350 (gp350) in complex with Cy137C02, a monoclonal antibody isolated from macaques immunized with a gp350 nanoparticle vaccine To Be Published 0 0 0 0 8SIO Crystal structure of PRMT3 with YD1-66 2023-04-16 2024-04-17 Song, X.,Dong, A.,Arrowsmith, C.H.,Edwards, A.M.,Deng, Y.,Huang, R.,Min, J. Crystal structure of PRMT3 with YD1-66 To be published 0 0 0 0 8T41 Crystal structure of aminopeptidase N from Mycobacterium tuberculosis 2023-06-08 2024-04-17 Park, H.W.,Moss, D.L.,Landry, S.J. Crystal structure of aminopeptidase N from Mycobacterium tuberculosis To Be Published 0 0 0 0 9BCB Crystal structure of human cellular retinol binding protein 3 in complex with C11 TopFluor MG 2024-04-08 2024-04-17 Golczak, M. Interactom of cellular retinol binding protein 3. To Be Published 0 0 0 0 8SDI Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM45 Coiled-Coil Domain 2023-04-06 2024-04-24 Lou, X.H.,Ma, B.B.,Zhuang, Y.,Li, X.C. Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM45 Coiled-Coil Domain To Be Published 0 0 0 0 8SDJ Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM20 Coiled-Coil Domain 2023-04-06 2024-04-24 Lou, X.H.,Ma, B.B.,Zhuang, Y.,Li, X.C. Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM20 Coiled-Coil Domain To Be Published 0 0 0 0 8SHB Crystal Structure of PRMT3 with Compound YD1-208 2023-04-13 2024-04-24 Song, X.,Dong, A.,Deng, Y.,Huang, R.,Arrowsmith, C.H.,Edwards, A.M.,Min, J.,Structural Genomics Consortium (SGC) Crystal Structure of PRMT3 with Compound YD1-208 To be published 0 0 0 0 8SIG Crystal Structure of PRMT4 with Compound YD1-288 2023-04-16 2024-04-24 Song, X.,Dong, A.,Deng, Y.,Huang, R.,Arrowsmith, C.H.,Edwards, A.M.,Min, J.,Structural Genomics Consortium (SGC) Crystal Structure of PRMT4 with Compound YD1-288 To be published 0 0 0 0 8SIH Crystal Structure of PRMT4 with Compound YD1-289 2023-04-16 2024-04-24 Song, X.,Dong, A.,Deng, Y.,Huang, R.,Arrowsmith, C.H.,Edwards, A.M.,Min, J.,Structural Genomics Consortium (SGC) Crystal Structure of PRMT4 with Compound YD1-289 To be published 0 0 0 0 8VH9 Crystal Structure of Human IDH1 R132Q in complex with NADPH 2023-12-31 2024-04-24 Mealka, M.,Sohl, C.D.,Huxford, T. Active site remodeling in tumor-relevant IDH1 mutants drive distinct kinetic features and possible resistance mechanisms To Be Published 0 0 0 0 8VHC Crystal Structure of Human IDH1 R132Q in complex with NADPH 2023-12-31 2024-04-24 Mealka, M.,Sohl, C.D.,Huxford, T. Active site remodeling in tumor-relevant IDH1 mutants drive distinct kinetic features and possible resistance mechanisms To Be Published 0 0 0 0 8VHE Crystal Structure of Human IDH1 R132Q in Complex with NADPH-TCEP Adduct 2023-12-31 2024-04-24 Mealka, M.,Sohl, C.D.,Huxford, T. Active site remodeling in tumor-relevant IDH1 mutants drive distinct kinetic features and possible resistance mechanisms To Be Published 0 0 0 0 8SM0 Crystal structure of human complement receptor 2 (CD21) in complex with Epstein-Barr virus major glycoprotein gp350 2023-04-25 2024-05-01 Chen, W.-H.,Bu, W.,Cohen, J.I.,Kanekiyo, M.,Joyce, G.M. Structural Basis For Receptor Engagement And Virus Neutralization Through Epstein-Barr Virus Gp350 To Be Published 0 0 0 0 8SM1 CRYSTAL STRUCTURE OF HUMAN ANTIBODY 769A9 IN COMPLEX WITH EPSTEIN-BARR VIRUS MAJOR GLYCOPROTEIN GP350 2023-04-25 2024-05-01 Chen, W.-H.,Bu, W.,Cohen, J.I.,Kanekiyo, M.,Joyce, G.M. Structural Basis For Receptor Engagement And Virus Neutralization Through Epstein-Barr Virus Gp350 To Be Published 0 0 0 0 8T9B Structure of the CK variant of Fab F1 (FabC-F1) in complex with the C-terminal FN3 domain of EphA2 2023-06-23 2024-05-01 Bruce, H.A.,Singer, A.U.,Filippova, E.,Blazer, L.,Adams, J.J.,Enderle, L.,Ben-David, M.,Radley, E.,Mao, D.,Pau, V.,Orlicky, S.,Sicheri, S.,Kourinov, I.,Atwell, S.,Kossiakoff, A.A.,Sidhu, S.S. Engineered Antigen-binding Fragments for Enhanced Crystallization of Antibody:Antigen Complexes To be Published 0 0 0 0 8T9V 38340640 RTA-RUNT-59 complex structure 2023-06-26 2024-05-01 Rudolph, M.J.,Dutta, A.,Tsymbal, A.M.,McLaughlin, J.E.,Chen, Y.,Davis, S.A.,Theodorous, S.A.,Pierce, M.,Algava, B.,Zhang, X.,Szekely, Z.,Roberge, J.Y.,Li, X.P.,Tumer, N.E. Structure-based design and optimization of a new class of small molecule inhibitors targeting the P-stalk binding pocket of ricin. Bioorg.Med.Chem. 2024 100 117614 117614 8TAB 38340640 RTA-PD00589 2023-06-27 2024-05-01 Rudolph, M.J.,Dutta, A.,Tsymbal, A.M.,McLaughlin, J.E.,Chen, Y.,Davis, S.A.,Theodorous, S.A.,Pierce, M.,Algava, B.,Zhang, X.,Szekely, Z.,Roberge, J.Y.,Li, X.P.,Tumer, N.E. Structure-based design and optimization of a new class of small molecule inhibitors targeting the P-stalk binding pocket of ricin. Bioorg.Med.Chem. 2024 100 117614 117614 8TAD 38340640 RTA in complex with inhibitor RUNT-206 2023-06-27 2024-05-01 Rudolph, M.J.,Dutta, A.,Tsymbal, A.M.,McLaughlin, J.E.,Chen, Y.,Davis, S.A.,Theodorous, S.A.,Pierce, M.,Algava, B.,Zhang, X.,Szekely, Z.,Roberge, J.Y.,Li, X.P.,Tumer, N.E. Structure-based design and optimization of a new class of small molecule inhibitors targeting the P-stalk binding pocket of ricin. Bioorg.Med.Chem. 2024 100 117614 117614